ExtendedRegion2	ProPr	promoter	724	795	0.96	-	.	ID=p_0002;locus_tag=p_0002;TSS=724;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCGCTCTCCAGGCGCCCGCGATACGTTCGCCGAGGCTCTGCTGGCGGCTTCCCACTGGTAATCTTGTGGCG
ExtendedRegion2	ProPr	promoter	834	905	0.99	+	.	ID=p_0001;locus_tag=p_0001;TSS=905;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=GATCAGTCGCGACTGGCGAACGAATCAGCCGTGAGCTGTTGACAGGACTCGTGTGTTGAAAATACTCTGCA
ExtendedRegion2	ProPr	promoter	18742	18813	1.0	-	.	ID=p_0003;locus_tag=p_0003;TSS=18742;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=TGCTCGGAGCGGAAATACTTTTCGACAAAGCCGTCGTTGCTTCGGTTTTTTTTCTGGCTTAGGGTCGGCGG
##gff-version  3
# Sequence Data: seqnum=1;seqlen=18986;seqhdr="ExtendedRegion2"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="36|Ralstonia_solanacearum_PSI07|B|66.1|11|1";gc_cont=66.10;transl_table=11;uses_sd=1
ExtendedRegion2	Prodigal_v2.6.3	CDS	3	644	126.6	-	0	ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.698;conf=100.00;score=125.98;cscore=115.20;sscore=10.78;rscore=7.30;uscore=-0.40;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	1000	1842	127.5	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.645;conf=100.00;score=127.52;cscore=111.32;sscore=16.20;rscore=8.88;uscore=2.78;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	1912	2733	140.3	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.631;conf=100.00;score=140.29;cscore=127.96;sscore=12.32;rscore=8.88;uscore=-1.10;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	2746	3417	136.9	+	0	ID=1_4;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.637;conf=100.00;score=138.08;cscore=129.04;sscore=9.04;rscore=15.89;uscore=0.14;tscore=-8.13;
ExtendedRegion2	Prodigal_v2.6.3	CDS	3430	4095	147.5	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.631;conf=100.00;score=148.66;cscore=127.58;sscore=21.09;rscore=15.89;uscore=-0.49;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	4123	5001	187.5	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.652;conf=99.99;score=188.50;cscore=171.01;sscore=17.49;rscore=8.88;uscore=3.09;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	5058	6101	151.4	+	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672;conf=100.00;score=152.08;cscore=133.60;sscore=18.49;rscore=15.89;uscore=-2.61;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	6098	7333	123.0	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.660;conf=100.00;score=124.27;cscore=117.27;sscore=7.00;rscore=0.72;uscore=0.44;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	7342	8772	141.6	-	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.587;conf=100.00;score=140.93;cscore=133.20;sscore=7.73;rscore=0.72;uscore=3.12;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	8791	9051	9.3	+	0	ID=1_10;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.644;conf=89.50;score=9.32;cscore=24.64;sscore=-15.32;rscore=-3.31;uscore=-0.41;tscore=-11.60;
ExtendedRegion2	Prodigal_v2.6.3	CDS	9048	10526	247.1	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.669;conf=99.99;score=248.35;cscore=230.05;sscore=18.30;rscore=10.30;uscore=2.17;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	10537	11580	157.7	+	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.671;conf=100.00;score=158.82;cscore=143.82;sscore=15.00;rscore=8.88;uscore=0.41;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	11628	12335	144.5	+	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.643;conf=100.00;score=145.27;cscore=139.29;sscore=5.98;rscore=0.72;uscore=-0.05;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	12345	12536	43.7	-	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.609;conf=100.00;score=45.21;cscore=39.98;sscore=5.23;rscore=0.50;uscore=-0.25;tscore=3.43;
ExtendedRegion2	Prodigal_v2.6.3	CDS	12533	16486	697.9	-	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.705;conf=99.99;score=698.68;cscore=684.97;sscore=13.71;rscore=7.30;uscore=1.13;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	16536	18605	402.7	-	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.648;conf=99.99;score=402.06;cscore=389.14;sscore=12.92;rscore=7.30;uscore=1.73;tscore=4.54;
ExtendedRegion2	Prodigal_v2.6.3	CDS	18889	18984	7.7	-	0	ID=1_17;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.688;conf=85.49;score=7.71;cscore=4.49;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
chrom	db	type	start	end	name	strand	score	description
CDS_0016	ProPr	promoter	76	147.0	prom_0003	+	1.0	ID=p_0003;locus_tag=p_0003;TSS=147.0;class=intergenic;min10seq=TGCTCGGAG;min10score=1;min10class=weak;promseq=TGCTCGGAGCGGAAATACTTTTCGACAAAGCCGTCGTTGCTTCGGTTTTTTTTCTGGCTTAGGGTCGGCGG
CDS_0002	ProPr	promoter	193	264.0	prom_0001	+	0.99	ID=p_0001;locus_tag=p_0001;TSS=264.0;class=intergenic;min10seq=TTGAAAATA;min10score=3;min10class=weak;promseq=GATCAGTCGCGACTGGCGAACGAATCAGCCGTGAGCTGTTGACAGGACTCGTGTGTTGAAAATACTCTGCA
CDS_0001	ProPr	promoter	205	276.0	prom_0002	+	0.96	ID=p_0002;locus_tag=p_0002;TSS=276.0;class=intergenic;min10seq=TGGTAATCT;min10score=2;min10class=weak;promseq=TCGCTCTCCAGGCGCCCGCGATACGTTCGCCGAGGCTCTGCTGGCGGCTTCCCACTGGTAATCTTGTGGCG
ExtendedRegion2	ProPr	promoter	724	795	0.96	-	.	ID=p_0002;locus_tag=p_0002;TSS=724;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCGCTCTCCAGGCGCCCGCGATACGTTCGCCGAGGCTCTGCTGGCGGCTTCCCACTGGTAATCTTGTGGCG
ExtendedRegion2	ProPr	promoter	834	905	0.99	+	.	ID=p_0001;locus_tag=p_0001;TSS=905;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=GATCAGTCGCGACTGGCGAACGAATCAGCCGTGAGCTGTTGACAGGACTCGTGTGTTGAAAATACTCTGCA
ExtendedRegion2	ProPr	promoter	18742	18813	1.0	-	.	ID=p_0003;locus_tag=p_0003;TSS=18742;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=TGCTCGGAGCGGAAATACTTTTCGACAAAGCCGTCGTTGCTTCGGTTTTTTTTCTGGCTTAGGGTCGGCGG
ExtendedRegion2	ProPr	gene	3	644	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGA;conf=100.00;prodigalID=1_1;
ExtendedRegion2	ProPr	gene	1000	1842	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
ExtendedRegion2	ProPr	gene	1912	2733	CDS_0003	+	100.00	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3;
ExtendedRegion2	ProPr	gene	2746	3417	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
ExtendedRegion2	ProPr	gene	3430	4095	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAG;conf=100.00;prodigalID=1_5;
ExtendedRegion2	ProPr	gene	4123	5001	CDS_0006	+	99.99	ID=CDS_0006;locus_tag=CDS_0006;RBS=GGAG/GAGG;conf=99.99;prodigalID=1_6;
ExtendedRegion2	ProPr	gene	5058	6101	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=AGGAG;conf=100.00;prodigalID=1_7;
ExtendedRegion2	ProPr	gene	6098	7333	CDS_0008	+	100.00	ID=CDS_0008;locus_tag=CDS_0008;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_8;
ExtendedRegion2	ProPr	gene	7342	8772	CDS_0009	-	100.00	ID=CDS_0009;locus_tag=CDS_0009;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_9;
ExtendedRegion2	ProPr	gene	8791	9051	CDS_0010	+	89.50	ID=CDS_0010;locus_tag=CDS_0010;RBS=None;conf=89.50;prodigalID=1_10;
ExtendedRegion2	ProPr	gene	9048	10526	CDS_0011	+	99.99	ID=CDS_0011;locus_tag=CDS_0011;RBS=GGAGG;conf=99.99;prodigalID=1_11;
ExtendedRegion2	ProPr	gene	10537	11580	CDS_0012	+	100.00	ID=CDS_0012;locus_tag=CDS_0012;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_12;
ExtendedRegion2	ProPr	gene	11628	12335	CDS_0013	+	100.00	ID=CDS_0013;locus_tag=CDS_0013;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_13;
ExtendedRegion2	ProPr	gene	12345	12536	CDS_0014	-	100.00	ID=CDS_0014;locus_tag=CDS_0014;RBS=AGGAG/GGAGG;conf=100.00;prodigalID=1_14;
ExtendedRegion2	ProPr	gene	12533	16486	CDS_0015	-	99.99	ID=CDS_0015;locus_tag=CDS_0015;RBS=AGGA;conf=99.99;prodigalID=1_15;
ExtendedRegion2	ProPr	gene	16536	18605	CDS_0016	-	99.99	ID=CDS_0016;locus_tag=CDS_0016;RBS=AGGA;conf=99.99;prodigalID=1_16;
ExtendedRegion2	ProPr	gene	18889	18984	CDS_0017	-	85.49	ID=CDS_0017;locus_tag=CDS_0017;RBS=None;conf=85.49;prodigalID=1_17;
ExtendedRegion2	ProPr	promoter	724	795	0.96	-	.	ID=p_0002;locus_tag=p_0002;TSS=724;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCGCTCTCCAGGCGCCCGCGATACGTTCGCCGAGGCTCTGCTGGCGGCTTCCCACTGGTAATCTTGTGGCG
ExtendedRegion2	ProPr	promoter	834	905	0.99	+	.	ID=p_0001;locus_tag=p_0001;TSS=905;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=GATCAGTCGCGACTGGCGAACGAATCAGCCGTGAGCTGTTGACAGGACTCGTGTGTTGAAAATACTCTGCA
ExtendedRegion2	ProPr	promoter	18742	18813	1.0	-	.	ID=p_0003;locus_tag=p_0003;TSS=18742;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=TGCTCGGAGCGGAAATACTTTTCGACAAAGCCGTCGTTGCTTCGGTTTTTTTTCTGGCTTAGGGTCGGCGG
ExtendedRegion2	ProPr	gene	3	644	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGA;conf=100.00;prodigalID=1_1;
ExtendedRegion2	ProPr	gene	1000	1842	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
ExtendedRegion2	ProPr	gene	1912	2733	CDS_0003	+	100.00	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3;
ExtendedRegion2	ProPr	gene	2746	3417	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
ExtendedRegion2	ProPr	gene	3430	4095	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAG;conf=100.00;prodigalID=1_5;
ExtendedRegion2	ProPr	gene	4123	5001	CDS_0006	+	99.99	ID=CDS_0006;locus_tag=CDS_0006;RBS=GGAG/GAGG;conf=99.99;prodigalID=1_6;
ExtendedRegion2	ProPr	gene	5058	6101	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=AGGAG;conf=100.00;prodigalID=1_7;
ExtendedRegion2	ProPr	gene	6098	7333	CDS_0008	+	100.00	ID=CDS_0008;locus_tag=CDS_0008;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_8;
ExtendedRegion2	ProPr	gene	7342	8772	CDS_0009	-	100.00	ID=CDS_0009;locus_tag=CDS_0009;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_9;
ExtendedRegion2	ProPr	gene	8791	9051	CDS_0010	+	89.50	ID=CDS_0010;locus_tag=CDS_0010;RBS=None;conf=89.50;prodigalID=1_10;
ExtendedRegion2	ProPr	gene	9048	10526	CDS_0011	+	99.99	ID=CDS_0011;locus_tag=CDS_0011;RBS=GGAGG;conf=99.99;prodigalID=1_11;
ExtendedRegion2	ProPr	gene	10537	11580	CDS_0012	+	100.00	ID=CDS_0012;locus_tag=CDS_0012;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_12;
ExtendedRegion2	ProPr	gene	11628	12335	CDS_0013	+	100.00	ID=CDS_0013;locus_tag=CDS_0013;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_13;
ExtendedRegion2	ProPr	gene	12345	12536	CDS_0014	-	100.00	ID=CDS_0014;locus_tag=CDS_0014;RBS=AGGAG/GGAGG;conf=100.00;prodigalID=1_14;
ExtendedRegion2	ProPr	gene	12533	16486	CDS_0015	-	99.99	ID=CDS_0015;locus_tag=CDS_0015;RBS=AGGA;conf=99.99;prodigalID=1_15;
ExtendedRegion2	ProPr	gene	16536	18605	CDS_0016	-	99.99	ID=CDS_0016;locus_tag=CDS_0016;RBS=AGGA;conf=99.99;prodigalID=1_16;
ExtendedRegion2	ProPr	gene	18889	18984	CDS_0017	-	85.49	ID=CDS_0017;locus_tag=CDS_0017;RBS=None;conf=85.49;prodigalID=1_17;