gb|AE001437.1|:891352-899338 ProPr promoter 2291 2362 0.98 + . ID=p_0001;locus_tag=p_0001;TSS=2362;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TAAATGTTAAATATATAATTTAGAATTGTTTTTTTATATAGTTAACATTTACACTTATTTTATACTATTTA gb|AE001437.1|:891352-899338 ProPr promoter 2408 2479 1.0 + . ID=p_0002;locus_tag=p_0002;TSS=2479;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCAAGGTTAAATTGAAATTTTTTTCAAAGTTACTTGACTTAGAGTTAACTTTAAGTCTTATAATATTATTA ##gff-version 3 # Sequence Data: seqnum=1;seqlen=7987;seqhdr="gb|AE001437.1|:891352-899338 Clostridium acetobutylicum ATCC 824, complete genome" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1 gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 178 1458 189.3 + 0 ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.347;conf=99.99;score=189.28;cscore=178.59;sscore=10.69;rscore=5.50;uscore=2.42;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 1486 2214 106.6 + 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347;conf=100.00;score=107.61;cscore=91.18;sscore=16.43;rscore=9.86;uscore=2.83;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 2523 3491 116.0 + 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.345;conf=100.00;score=115.30;cscore=104.09;sscore=11.22;rscore=7.34;uscore=1.77;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 3488 4297 68.5 + 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.252;conf=100.00;score=69.79;cscore=55.30;sscore=14.50;rscore=9.86;uscore=0.58;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 4316 5041 98.0 + 0 ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.320;conf=100.00;score=99.06;cscore=90.29;sscore=8.77;rscore=7.34;uscore=-2.41;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 5088 6350 201.7 + 0 ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.321;conf=99.99;score=202.49;cscore=189.49;sscore=13.00;rscore=9.86;uscore=-0.39;tscore=2.76; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 6375 7190 120.1 + 0 ID=1_7;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.314;conf=100.00;score=121.11;cscore=112.21;sscore=8.89;rscore=7.34;uscore=1.72;tscore=-1.17; gb|AE001437.1|:891352-899338 Prodigal_v2.6.3 CDS 7211 7957 121.9 + 0 ID=1_8;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.332;conf=100.00;score=122.97;cscore=124.43;sscore=-1.46;rscore=7.34;uscore=-0.71;tscore=-9.15; chrom db type start end name strand score description CDS_0003 ProPr promoter 80 151.0 prom_0001 + 0.98 ID=p_0001;locus_tag=p_0001;TSS=151.0;class=intergenic;min10seq=TATTTTATA;min10score=3;min10class=weak;promseq=TAAATGTTAAATATATAATTTAGAATTGTTTTTTTATATAGTTAACATTTACACTTATTTTATACTATTTA CDS_0003 ProPr promoter 193 264.0 prom_0002 + 1.0 ID=p_0002;locus_tag=p_0002;TSS=264.0;class=intergenic;min10seq=TCTTATAAT;min10score=4;min10class=weak;promseq=TCAAGGTTAAATTGAAATTTTTTTCAAAGTTACTTGACTTAGAGTTAACTTTAAGTCTTATAATATTATTA gb|AE001437.1|:891352-899338 ProPr promoter 2291 2362 0.98 + . ID=p_0001;locus_tag=p_0001;TSS=2362;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TAAATGTTAAATATATAATTTAGAATTGTTTTTTTATATAGTTAACATTTACACTTATTTTATACTATTTA gb|AE001437.1|:891352-899338 ProPr promoter 2408 2479 1.0 + . ID=p_0002;locus_tag=p_0002;TSS=2479;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCAAGGTTAAATTGAAATTTTTTTCAAAGTTACTTGACTTAGAGTTAACTTTAAGTCTTATAATATTATTA gb|AE001437.1|:891352-899338 ProPr gene 178 1458 CDS_0001 + 99.99 ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGA;conf=99.99;prodigalID=1_1; gb|AE001437.1|:891352-899338 ProPr gene 1486 2214 CDS_0002 + 100.00 ID=CDS_0002;locus_tag=CDS_0002;RBS=AGGAG;conf=100.00;prodigalID=1_2; gb|AE001437.1|:891352-899338 ProPr gene 2523 3491 CDS_0003 + 100.00 ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3; gb|AE001437.1|:891352-899338 ProPr gene 3488 4297 CDS_0004 + 100.00 ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4; gb|AE001437.1|:891352-899338 ProPr gene 4316 5041 CDS_0005 + 100.00 ID=CDS_0005;locus_tag=CDS_0005;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_5; gb|AE001437.1|:891352-899338 ProPr gene 5088 6350 CDS_0006 + 99.99 ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGAG;conf=99.99;prodigalID=1_6; gb|AE001437.1|:891352-899338 ProPr gene 6375 7190 CDS_0007 + 100.00 ID=CDS_0007;locus_tag=CDS_0007;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_7; gb|AE001437.1|:891352-899338 ProPr gene 7211 7957 CDS_0008 + 100.00 ID=CDS_0008;locus_tag=CDS_0008;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_8; gb|AE001437.1|:891352-899338 ProPr promoter 2291 2362 0.98 + . ID=p_0001;locus_tag=p_0001;TSS=2362;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TAAATGTTAAATATATAATTTAGAATTGTTTTTTTATATAGTTAACATTTACACTTATTTTATACTATTTA gb|AE001437.1|:891352-899338 ProPr promoter 2408 2479 1.0 + . ID=p_0002;locus_tag=p_0002;TSS=2479;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TCAAGGTTAAATTGAAATTTTTTTCAAAGTTACTTGACTTAGAGTTAACTTTAAGTCTTATAATATTATTA gb|AE001437.1|:891352-899338 ProPr gene 178 1458 CDS_0001 + 99.99 ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGA;conf=99.99;prodigalID=1_1; gb|AE001437.1|:891352-899338 ProPr gene 1486 2214 CDS_0002 + 100.00 ID=CDS_0002;locus_tag=CDS_0002;RBS=AGGAG;conf=100.00;prodigalID=1_2; gb|AE001437.1|:891352-899338 ProPr gene 2523 3491 CDS_0003 + 100.00 ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3; gb|AE001437.1|:891352-899338 ProPr gene 3488 4297 CDS_0004 + 100.00 ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4; gb|AE001437.1|:891352-899338 ProPr gene 4316 5041 CDS_0005 + 100.00 ID=CDS_0005;locus_tag=CDS_0005;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_5; gb|AE001437.1|:891352-899338 ProPr gene 5088 6350 CDS_0006 + 99.99 ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGAG;conf=99.99;prodigalID=1_6; gb|AE001437.1|:891352-899338 ProPr gene 6375 7190 CDS_0007 + 100.00 ID=CDS_0007;locus_tag=CDS_0007;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_7; gb|AE001437.1|:891352-899338 ProPr gene 7211 7957 CDS_0008 + 100.00 ID=CDS_0008;locus_tag=CDS_0008;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_8;