##gff-version 3 # Sequence Data: seqnum=1;seqlen=2642;seqhdr="Minf|CP002009.1|18281|20923" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1 Minf|CP002009.1|18281|20923 Prodigal_v2.6.3 CDS 2 625 66.4 + 0 ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.354;conf=100.00;score=66.42;cscore=63.20;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; Minf|CP002009.1|18281|20923 Prodigal_v2.6.3 CDS 617 1702 170.1 - 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.280;conf=100.00;score=171.20;cscore=165.81;sscore=5.39;rscore=-1.10;uscore=2.66;tscore=2.76; Minf|CP002009.1|18281|20923 Prodigal_v2.6.3 CDS 1722 2591 97.2 - 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.285;conf=100.00;score=97.15;cscore=81.22;sscore=15.93;rscore=9.86;uscore=3.31;tscore=2.76; # Sequence Data: seqnum=2;seqlen=9117;seqhdr="Minf|CP002009.1|28609|37726" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="24|Ignisphaera_aggregans_DSM_17230|A|35.7|11|1";gc_cont=35.70;transl_table=11;uses_sd=1 Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 749 967 11.2 + 0 ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.283;conf=92.87;score=11.17;cscore=12.04;sscore=-0.87;rscore=-3.43;uscore=0.94;tscore=1.62; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 998 2353 135.6 - 0 ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.350;conf=100.00;score=136.88;cscore=135.69;sscore=1.20;rscore=-2.97;uscore=1.03;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 2356 2988 50.3 - 0 ID=2_3;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.325;conf=100.00;score=50.28;cscore=41.44;sscore=8.84;rscore=6.94;uscore=0.02;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 3051 3308 31.2 - 0 ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.318;conf=99.94;score=32.47;cscore=22.50;sscore=9.97;rscore=5.75;uscore=1.09;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 3311 3637 56.0 - 0 ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.333;conf=100.00;score=57.12;cscore=51.81;sscore=5.30;rscore=3.82;uscore=-1.51;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 3653 5041 165.2 - 0 ID=2_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.390;conf=100.00;score=166.30;cscore=153.96;sscore=12.34;rscore=3.82;uscore=5.49;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 5053 6486 171.4 - 0 ID=2_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384;conf=100.00;score=171.37;cscore=169.64;sscore=1.73;rscore=3.82;uscore=-3.97;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 6497 6946 64.8 - 0 ID=2_8;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376;conf=100.00;score=64.79;cscore=71.00;sscore=-6.21;rscore=-2.97;uscore=0.98;tscore=-4.23; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 6903 7220 65.3 - 0 ID=2_9;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.358;conf=100.00;score=66.09;cscore=56.03;sscore=10.06;rscore=6.94;uscore=4.14;tscore=-1.84; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 7263 8117 124.4 - 0 ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.395;conf=100.00;score=123.71;cscore=120.60;sscore=3.12;rscore=3.82;uscore=-1.93;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 8298 8654 21.1 + 0 ID=2_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.297;conf=99.23;score=21.11;cscore=12.34;sscore=8.77;rscore=3.82;uscore=3.07;tscore=1.88; Minf|CP002009.1|28609|37726 Prodigal_v2.6.3 CDS 8716 9117 87.0 + 0 ID=2_12;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.363;conf=100.00;score=86.99;cscore=81.19;sscore=5.80;rscore=3.82;uscore=0.10;tscore=1.88; # Sequence Data: seqnum=3;seqlen=2777;seqhdr="Minf|CP002009.1|47997|50774" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1 Minf|CP002009.1|47997|50774 Prodigal_v2.6.3 CDS 3 995 117.6 + 0 ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.353;conf=100.00;score=117.60;cscore=114.38;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; Minf|CP002009.1|47997|50774 Prodigal_v2.6.3 CDS 992 1786 87.5 + 0 ID=3_2;partial=00;start_type=TTG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.353;conf=100.00;score=88.82;cscore=91.36;sscore=-2.54;rscore=2.94;uscore=2.37;tscore=-9.15; Minf|CP002009.1|47997|50774 Prodigal_v2.6.3 CDS 1793 2503 81.1 + 0 ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.349;conf=100.00;score=82.27;cscore=78.97;sscore=3.30;rscore=-1.10;uscore=0.42;tscore=2.76; Minf|CP002009.1|47997|50774 Prodigal_v2.6.3 CDS 2487 2777 34.1 - 0 ID=3_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.285;conf=99.96;score=34.11;cscore=30.90;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=4;seqlen=2324;seqhdr="Minf|CP002009.1|126227|128551" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="24|Ignisphaera_aggregans_DSM_17230|A|35.7|11|1";gc_cont=35.70;transl_table=11;uses_sd=1 Minf|CP002009.1|126227|128551 Prodigal_v2.6.3 CDS 3 713 101.2 - 0 ID=4_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.359;conf=100.00;score=100.55;cscore=105.58;sscore=-5.03;rscore=-2.97;uscore=-3.29;tscore=1.88; Minf|CP002009.1|126227|128551 Prodigal_v2.6.3 CDS 740 982 38.7 + 0 ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.333;conf=99.99;score=38.71;cscore=33.64;sscore=5.07;rscore=3.67;uscore=-0.40;tscore=1.80; Minf|CP002009.1|126227|128551 Prodigal_v2.6.3 CDS 986 1324 66.4 - 0 ID=4_3;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.392;conf=100.00;score=67.50;cscore=61.67;sscore=5.83;rscore=6.94;uscore=-0.32;tscore=-1.84; Minf|CP002009.1|126227|128551 Prodigal_v2.6.3 CDS 1345 2322 116.3 - 0 ID=4_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.392;conf=100.00;score=116.28;cscore=113.06;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=5;seqlen=3065;seqhdr="Minf|CP002009.1|411998|415063" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="24|Ignisphaera_aggregans_DSM_17230|A|35.7|11|1";gc_cont=35.70;transl_table=11;uses_sd=1 Minf|CP002009.1|411998|415063 Prodigal_v2.6.3 CDS 3 941 105.5 + 0 ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.342;conf=100.00;score=105.47;cscore=102.25;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; Minf|CP002009.1|411998|415063 Prodigal_v2.6.3 CDS 938 2473 265.8 + 0 ID=5_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.382;conf=99.99;score=267.29;cscore=257.22;sscore=10.06;rscore=6.89;uscore=-0.15;tscore=1.88; Minf|CP002009.1|411998|415063 Prodigal_v2.6.3 CDS 2578 3063 58.6 + 0 ID=5_3;partial=01;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.337;conf=100.00;score=58.57;cscore=49.63;sscore=8.95;rscore=6.56;uscore=0.51;tscore=1.88; # Sequence Data: seqnum=6;seqlen=3023;seqhdr="Minf|CP002009.1|455786|458809" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="24|Ignisphaera_aggregans_DSM_17230|A|35.7|11|1";gc_cont=35.70;transl_table=11;uses_sd=1 Minf|CP002009.1|455786|458809 Prodigal_v2.6.3 CDS 2 499 66.2 - 0 ID=6_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.365;conf=100.00;score=66.19;cscore=65.80;sscore=0.39;rscore=-2.97;uscore=1.48;tscore=1.88; Minf|CP002009.1|455786|458809 Prodigal_v2.6.3 CDS 569 2041 227.0 - 0 ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.382;conf=99.99;score=228.27;cscore=218.55;sscore=9.72;rscore=3.82;uscore=2.72;tscore=1.88; Minf|CP002009.1|455786|458809 Prodigal_v2.6.3 CDS 2038 3021 128.9 - 0 ID=6_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.331;conf=100.00;score=128.95;cscore=125.73;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=7;seqlen=2324;seqhdr="Minf|CP002009.1|857584|859908" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="24|Ignisphaera_aggregans_DSM_17230|A|35.7|11|1";gc_cont=35.70;transl_table=11;uses_sd=1 Minf|CP002009.1|857584|859908 Prodigal_v2.6.3 CDS 3 962 119.3 - 0 ID=7_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.393;conf=100.00;score=120.37;cscore=111.57;sscore=8.80;rscore=5.75;uscore=0.15;tscore=1.88; Minf|CP002009.1|857584|859908 Prodigal_v2.6.3 CDS 986 1324 67.7 - 0 ID=7_2;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.398;conf=100.00;score=67.69;cscore=62.09;sscore=5.60;rscore=6.89;uscore=0.55;tscore=-1.84; Minf|CP002009.1|857584|859908 Prodigal_v2.6.3 CDS 1459 2322 116.2 - 0 ID=7_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.392;conf=100.00;score=116.22;cscore=113.00;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;