chrom	Lstart	Lend	Lstem	Rstart	Rend	Rstem	loop	match%	Indels	score	AT	GC	ATpairs	GCpairs	GTpairs	Center	Lseq	Rseq	intergenic	tailL	tailR	polyTL	polyTR	strand	TTseq	FACoPscore	locus_tag	type	start	end	strand_y	stream	seq	aug_seq	3primeUTR	3primeUTRlen	ID
RC_nif_cluster_2_-_CP001312.1	26161	26171	11	26177	26187	11	5	100	0	22	36	63	36	63	0	26173	AAAACCCCGCC	GGCGGGGTTTT	True	GGAAATGAA	CCGGTCCTT	True	True	+	AAAACCCCGCC AGCGC GGCGGGGTTTT CCGGTCCTT	92	CDS_0025	intergenic	25941	26206	-	down	AAACCGCCGCAAGGACCGGAAAACCCCGCCGCGCTGGCGGGGTTTTTCATTTCCTCCCGACAGAGGGCCCGACAAAACCCCGCCCGACACCGCAGGCCCTACAATTTGTCGGCCTTGTTCCATTTCGAACAAAACCTTCAACACCATGATTTCGCGTCATTATTTGCGAAAATTCCGGTTGGCACGATGGCTGCTGTAGAAGCTGTGAGCCCGGTTAGGAACCGTCTCGATATTCGTGAAGCACCAACCCCCAAGGGAGCCACAC	CCGGCACCCCCGGCGGCTCGGTCTGAAACCGCCGCAAGGACCGGAAAACCCCGCCGCGCTGGCGGGGTTTTTCATTTCCTCCCGACAGAGGGCCCGACAAAACCCCGCCCGACACCGCAGGCCCTACAATTTGTCGGCCTTGTTCCATTTCGAACAAAACCTTCAACACCATGATTTCGCGTCATTATTTGCGAAAATTCCGGTTGGCACGATGGCTGCTGTAGAAGCTGTGAGCCCGGTTAGGAACCGTCTCGATATTCGTGAAGCACCAACCCCCAAGGGAGCCACACATGGGCAAACTCCGTCAGATCGCCT	GTGTGGCTCCCTTGGGGGTTGGTGCTTCACGAATATCGAGACGGTTCCTAACCGGGCTCACAGCTTCTACAGCAGCCATCGTGCCAACCGGAATTTTCGCAAATAATGACGCGAAATCATGGTGTTGAAGGTTTTGTTCGAAATGGAACAAGGCCGACAAATTGTAGGGCCTGCGGTGTCGGGCGGGGTTTTGTCGGGCCCTCTGTCGGGAGGAAATGAAAAACCCCGCCAGCGCGGCGGGGTTTT	246	TTerm_0001
RC_nif_cluster_2_-_CP001312.1	37225	37231	7	37236	37242	7	4	100	0	14	0	100	0	100	0	37233	GCCCCGC	GCGGGGC	True	GAATACCGG	TTTTTCTTT	False	True	+	GCCCCGC TTCG GCGGGGC TTTTTCTTT	76	CDS_0036	intergenic	37200	37464	+	down	TCGACGGCCAATGACCGAATACCGGCCCCGCTTCGGCGGGGCTTTTTCTTTGCGGCAGCCCGTTCGGAATTCCGTTTACCGAACGGTAATCGGTTACATAACGGTAAGGAGTTCCTGTCGGGCGACGGGGCGATGATTTCCATTAATATCATATGGTTGAGCGGGCATTTCGCCCCGAAGCCGCCTTGGCACGGGGGCTGCTCTATAGGGTTCAGACGGATGCGAAACGCCGTCGCAAGACATCCCTTCCCAAGGAGCGACCCA	GCACCGGTATCGCGCTTCGGCCTGATCGACGGCCAATGACCGAATACCGGCCCCGCTTCGGCGGGGCTTTTTCTTTGCGGCAGCCCGTTCGGAATTCCGTTTACCGAACGGTAATCGGTTACATAACGGTAAGGAGTTCCTGTCGGGCGACGGGGCGATGATTTCCATTAATATCATATGGTTGAGCGGGCATTTCGCCCCGAAGCCGCCTTGGCACGGGGGCTGCTCTATAGGGTTCAGACGGATGCGAAACGCCGTCGCAAGACATCCCTTCCCAAGGAGCGACCCATGACCCGCAAGATCGCCATTTACGG	TCGACGGCCAATGACCGAATACCGGCCCCGCTTCGGCGGGGC	42	TTerm_0002
RC_nif_cluster_2_-_CP001312.1	41702	41709	8	41717	41724	8	7	100	0	16	0	100	0	100	0	41712	GCCGGGCC	GGCCCGGC	True	CGCAACCTG	CTTTTCCCT	False	True	+	GCCGGGCC GCCCCGT GGCCCGGC CTTTTCCCT	80	CDS_0040	intergenic	41682	41753	+	down	CGGCATCGCCGCGCAACCTGCCGGGCCGCCCCGTGGCCCGGCCTTTTCCCTTTCGCGTCAGGAGCTTCCCA	GGAATGGATCCTCAACGTGTGGTGACGGCATCGCCGCGCAACCTGCCGGGCCGCCCCGTGGCCCGGCCTTTTCCCTTTCGCGTCAGGAGCTTCCCATGCAGATCGCGGTTTTTCTGGACGA	CGGCATCGCCGCGCAACCTGCCGGGCCGCCCCGTGGCCCGGC	42	TTerm_0003
RC_nif_cluster_2_-_CP001312.1	692	698	7	704	710	7	5	100	0	14	14	85	14	85	0	700	GGCCGAG	CTCGGCC	True	AAAAAAAGG	TTAGTCCAA	True	False	-	GGCCGAG CTTGT CTCGGCC CCTTTTTTT	68	CDS_0002	intergenic	507	885	-	down	ATCCCGGGGCAGACGCAACCGGCAAGCGAAATCAGACATTCGCGCAACGCATAGCTGCCATGCTGCACTCGCAGCATGATTCTCCTTGAACCGTTCTTATTCTGCCCATAAATCGGGCTTCGAAGGCGATGAGTTGCGGAAACGCGCATCACCTTCTACCTCCCTGTTGGACTAAGGCCGAGCTTGTCTCGGCCCTTTTTTTATCTTCGGGTAAAAGCGGCGTTTTCCGACCGCTCCGCGTCGTTTTGCACCGCTCTCGCGCTCTGGCTGTATCGCCTTGCGACGGCCGCGGCAAAATCCGCCCCCGCAGCGCGCAGGCCCCTTCCCCGACCGGCCCCGATGTTCTAAGGGAAGCCAAAGCCGATGCCGGAGGAGCCG	AGACCGGCGACGCCGCCGTCGACTGATCCCGGGGCAGACGCAACCGGCAAGCGAAATCAGACATTCGCGCAACGCATAGCTGCCATGCTGCACTCGCAGCATGATTCTCCTTGAACCGTTCTTATTCTGCCCATAAATCGGGCTTCGAAGGCGATGAGTTGCGGAAACGCGCATCACCTTCTACCTCCCTGTTGGACTAAGGCCGAGCTTGTCTCGGCCCTTTTTTTATCTTCGGGTAAAAGCGGCGTTTTCCGACCGCTCCGCGTCGTTTTGCACCGCTCTCGCGCTCTGGCTGTATCGCCTTGCGACGGCCGCGGCAAAATCCGCCCCCGCAGCGCGCAGGCCCCTTCCCCGACCGGCCCCGATGTTCTAAGGGAAGCCAAAGCCGATGCCGGAGGAGCCGATGACCGAGCCGCAGATCACCCCCG	ATCCCGGGGCAGACGCAACCGGCAAGCGAAATCAGACATTCGCGCAACGCATAGCTGCCATGCTGCACTCGCAGCATGATTCTCCTTGAACCGTTCTTATTCTGCCCATAAATCGGGCTTCGAAGGCGATGAGTTGCGGAAACGCGCATCACCTTCTACCTCCCTGTTGGACTAAGGCCGAGCTTGTCTCGGC	193	TTerm_0004
RC_nif_cluster_2_-_CP001312.1	17646	17658	13	17665	17677	13	6	76	0	11	34	65	30	70	0	17661	TGCGCTTTTGTCG	CGACAGGCGCGCA	True	ACAAAACCT	AACAAAAAC	True	False	-	TGCGCGCCTGTCG CATTCC CGACAAAAGCGCA AGGTTTTGT	54	CDS_0019	intergenic	17558	17727	-	down	AGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGC	TCGAGATCGAGCTGCGCAAGATCTGAGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGCATGTCGGACAATGTCGTGGCCCTTG	AGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGC	81	TTerm_0005
RC_nif_cluster_2_-_CP001312.1	17685	17692	8	17697	17704	8	4	100	0	16	12	87	12	87	0	17694	ACCCCGGC	GCCGGGGT	True	AAACAAAAA	CCGTCGCGT	True	False	-	ACCCCGGC TTCG GCCGGGGT TTTTTGTTT	80	CDS_0019	intergenic	17558	17727	-	down	AGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGC	TCGAGATCGAGCTGCGCAAGATCTGAGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGCATGTCGGACAATGTCGTGGCCCTTG	AGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGG	42	TTerm_0006
RC_nif_cluster_2_-_CP001312.1	21808	21816	9	21821	21829	9	4	100	0	18	22	77	22	77	0	21818	GCCGGCAGT	ACTGCCGGC	True	CGAAAAAAG	CCAGGTCGA	True	False	-	GCCGGCAGT TTCG ACTGCCGGC CTTTTTTCG	68	CDS_0022	intergenic	21622	21851	-	down	AGCACGCTTTCTCTCGACCTGGGCCGGCAGTTTCGACTGCCGGCTTTTTTCGTTTCGGCCCGACGTTCGGCAAGGTCCACCGCCCCCGACCCGATTTTCCGCATTTACAACAATGTCTGTCGCAAATCCCCCAATGTGGGCCTGAAGCTTGCTTGCGGGGCCCGTTACGGTTGGCACGCTTCTTGCTGGATCATTTCTGAAGCCTCAACCGATCAAAAAGGGGGATGCG	ACATCAGCTTCGATCTGACCCGCTGAGCACGCTTTCTCTCGACCTGGGCCGGCAGTTTCGACTGCCGGCTTTTTTCGTTTCGGCCCGACGTTCGGCAAGGTCCACCGCCCCCGACCCGATTTTCCGCATTTACAACAATGTCTGTCGCAAATCCCCCAATGTGGGCCTGAAGCTTGCTTGCGGGGCCCGTTACGGTTGGCACGCTTCTTGCTGGATCATTTCTGAAGCCTCAACCGATCAAAAAGGGGGATGCGATGAAGGATCTCTTCGACGAAAGCC	AGCACGCTTTCTCTCGACCTGGGCCGGCAGTTTCGACTGCCGG	43	TTerm_0007
RC_nif_cluster_2_-_CP001312.1	26161	26171	11	26177	26187	11	5	100	0	22	36	63	36	63	0	26173	AAAACCCCGCC	GGCGGGGTTTT	True	GGAAATGAA	CCGGTCCTT	True	True	-	AAAACCCCGCC GCGCT GGCGGGGTTTT TTCATTTCC	92	CDS_0025	intergenic	25941	26206	-	down	AAACCGCCGCAAGGACCGGAAAACCCCGCCGCGCTGGCGGGGTTTTTCATTTCCTCCCGACAGAGGGCCCGACAAAACCCCGCCCGACACCGCAGGCCCTACAATTTGTCGGCCTTGTTCCATTTCGAACAAAACCTTCAACACCATGATTTCGCGTCATTATTTGCGAAAATTCCGGTTGGCACGATGGCTGCTGTAGAAGCTGTGAGCCCGGTTAGGAACCGTCTCGATATTCGTGAAGCACCAACCCCCAAGGGAGCCACAC	CCGGCACCCCCGGCGGCTCGGTCTGAAACCGCCGCAAGGACCGGAAAACCCCGCCGCGCTGGCGGGGTTTTTCATTTCCTCCCGACAGAGGGCCCGACAAAACCCCGCCCGACACCGCAGGCCCTACAATTTGTCGGCCTTGTTCCATTTCGAACAAAACCTTCAACACCATGATTTCGCGTCATTATTTGCGAAAATTCCGGTTGGCACGATGGCTGCTGTAGAAGCTGTGAGCCCGGTTAGGAACCGTCTCGATATTCGTGAAGCACCAACCCCCAAGGGAGCCACACATGGGCAAACTCCGTCAGATCGCCT	AAACCGCCGCAAGGACCGGAAAACCCCGCCGCGCTGGCGGGGTTT	45	TTerm_0008