##gff-version  3
# Sequence Data: seqnum=1;seqlen=45799;seqhdr="RC_nif_cluster_2_-_CP001312.1 Rhodobacter capsulatus SB 1003, complete genome"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="36|Ralstonia_solanacearum_PSI07|B|66.1|11|1";gc_cont=66.10;transl_table=11;uses_sd=1
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	1	507	100.6	-	0	ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.641;conf=100.00;score=99.90;cscore=87.73;sscore=12.17;rscore=10.30;uscore=-2.01;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	885	1793	163.3	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648;conf=100.00;score=162.67;cscore=161.90;sscore=0.76;rscore=-3.31;uscore=0.18;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	2040	2852	150.0	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.653;conf=100.00;score=150.00;cscore=137.00;sscore=13.00;rscore=8.88;uscore=-0.42;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	2856	3620	86.3	-	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.675;conf=100.00;score=85.66;cscore=70.66;sscore=15.00;rscore=8.88;uscore=2.23;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	3696	4724	183.7	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.641;conf=99.99;score=183.70;cscore=172.61;sscore=11.09;rscore=8.88;uscore=-2.33;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	4740	5192	104.0	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.669;conf=100.00;score=105.06;cscore=99.03;sscore=6.04;rscore=0.72;uscore=-0.34;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	5257	5868	86.8	+	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.680;conf=100.00;score=86.80;cscore=80.88;sscore=5.92;rscore=0.72;uscore=0.65;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	5859	6353	65.6	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.687;conf=100.00;score=66.87;cscore=60.58;sscore=6.29;rscore=2.04;uscore=-1.52;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	6418	8127	275.5	-	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.635;conf=99.99;score=274.82;cscore=274.32;sscore=0.50;rscore=-3.31;uscore=-0.08;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	8329	10005	277.0	+	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.699;conf=99.99;score=277.03;cscore=272.11;sscore=4.93;rscore=0.72;uscore=-0.34;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	10140	10760	118.0	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.676;conf=100.00;score=117.95;cscore=114.00;sscore=3.96;rscore=0.72;uscore=-1.31;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	10776	11561	150.9	-	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.716;conf=100.00;score=150.23;cscore=136.50;sscore=13.73;rscore=10.30;uscore=-0.45;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	11848	12645	158.8	+	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.695;conf=100.00;score=158.83;cscore=149.06;sscore=9.77;rscore=0.72;uscore=4.50;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	12680	13438	152.3	+	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.631;conf=100.00;score=153.20;cscore=137.41;sscore=15.79;rscore=7.30;uscore=3.05;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	13444	14130	124.7	+	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.651;conf=100.00;score=125.94;cscore=123.17;sscore=2.77;rscore=-3.31;uscore=0.32;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	14127	15218	141.0	+	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.693;conf=100.00;score=146.62;cscore=140.78;sscore=5.84;rscore=-3.31;uscore=-1.05;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	15222	16061	121.1	+	0	ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.724;conf=100.00;score=122.29;cscore=108.54;sscore=13.75;rscore=10.30;uscore=-2.33;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	16065	17558	241.7	-	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656;conf=99.99;score=241.72;cscore=228.53;sscore=13.19;rscore=8.88;uscore=-0.23;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	17727	19475	297.6	-	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.686;conf=99.99;score=296.91;cscore=286.43;sscore=10.49;rscore=8.88;uscore=-2.29;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	19769	21055	213.5	-	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.685;conf=99.99;score=213.47;cscore=205.73;sscore=7.74;rscore=0.72;uscore=2.47;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	21194	21622	62.6	-	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.718;conf=100.00;score=61.90;cscore=54.88;sscore=7.02;rscore=0.72;uscore=2.41;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	21851	23389	311.7	-	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.616;conf=99.99;score=311.67;cscore=298.91;sscore=12.75;rscore=7.30;uscore=0.91;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	23483	24988	322.1	-	0	ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602;conf=99.99;score=322.13;cscore=308.59;sscore=13.54;rscore=8.88;uscore=0.11;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	25054	25941	194.6	-	0	ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602;conf=99.99;score=193.98;cscore=178.33;sscore=15.65;rscore=8.88;uscore=2.88;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	26206	26577	86.7	-	0	ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629;conf=100.00;score=86.01;cscore=72.28;sscore=13.73;rscore=8.88;uscore=0.96;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	26717	27343	86.1	+	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.735;conf=100.00;score=86.06;cscore=83.39;sscore=2.68;rscore=-3.31;uscore=1.44;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	27401	27679	60.5	+	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.616;conf=100.00;score=61.13;cscore=46.56;sscore=14.56;rscore=8.88;uscore=0.49;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	27738	29981	317.9	-	0	ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.721;conf=99.99;score=319.12;cscore=299.41;sscore=19.71;rscore=8.88;uscore=5.10;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	29990	30793	152.2	-	0	ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.664;conf=100.00;score=152.20;cscore=135.92;sscore=16.28;rscore=8.88;uscore=2.85;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	30893	31249	68.5	-	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.602;conf=100.00;score=69.48;cscore=57.76;sscore=11.72;rscore=7.30;uscore=-1.15;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	31272	32693	291.6	-	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.640;conf=99.99;score=290.95;cscore=276.24;sscore=14.70;rscore=8.88;uscore=1.93;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	32803	33699	168.0	+	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.700;conf=100.00;score=168.01;cscore=158.70;sscore=9.31;rscore=0.72;uscore=4.04;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	33891	34442	67.5	+	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.716;conf=100.00;score=66.88;cscore=53.42;sscore=13.45;rscore=8.88;uscore=0.68;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	34439	34759	73.9	-	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.682;conf=100.00;score=77.66;cscore=55.93;sscore=21.73;rscore=15.89;uscore=-2.46;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	34756	35373	74.2	-	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.697;conf=100.00;score=73.54;cscore=69.76;sscore=3.78;rscore=-3.31;uscore=3.20;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	35584	37200	285.8	+	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.641;conf=99.99;score=285.78;cscore=268.02;sscore=17.76;rscore=8.88;uscore=4.34;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	37464	38291	192.5	+	0	ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603;conf=99.99;score=191.87;cscore=168.15;sscore=23.72;rscore=15.89;uscore=3.94;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	38348	39931	324.1	+	0	ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.605;conf=99.99;score=324.73;cscore=309.30;sscore=15.43;rscore=8.88;uscore=1.34;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	39939	40286	75.8	+	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.592;conf=100.00;score=76.97;cscore=64.06;sscore=12.91;rscore=8.88;uscore=-1.71;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	40300	41682	274.1	+	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.601;conf=99.99;score=275.23;cscore=261.04;sscore=14.19;rscore=7.30;uscore=1.22;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	41753	42433	103.5	+	0	ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.686;conf=100.00;score=103.51;cscore=81.58;sscore=21.93;rscore=15.89;uscore=1.49;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	42430	42951	75.3	+	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.670;conf=100.00;score=76.59;cscore=62.46;sscore=14.14;rscore=7.30;uscore=1.00;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	42963	43613	110.5	+	0	ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.654;conf=100.00;score=111.64;cscore=98.45;sscore=13.18;rscore=7.30;uscore=0.19;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	43649	44422	126.7	-	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.693;conf=100.00;score=128.01;cscore=113.14;sscore=14.88;rscore=8.88;uscore=0.16;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	44419	45006	70.7	-	0	ID=1_45;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.679;conf=100.00;score=70.06;cscore=73.00;sscore=-2.94;rscore=-3.31;uscore=-3.52;tscore=4.54;
RC_nif_cluster_2_-_CP001312.1	Prodigal_v2.6.3	CDS	45079	45798	139.6	+	0	ID=1_46;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.682;conf=100.00;score=139.61;cscore=124.26;sscore=15.36;rscore=8.88;uscore=1.93;tscore=4.54;