chrom_intergenic ID locus__tag TSS adjTSS_intergenic min10seq min10score score prediction class strand_intergenic promoterSeq start_intergenic end_intergenic chrom locus_tag_intergenic type startIntergenic endIntergenic strand stream seq aug_seq locus_tag CDS_0003 p_0001 p_0001 2309 88 TGATACCTT 2 0.73 poor intergenic + GCGTTTCGGGCTTGTCAGTGACGGCTATCACAGGAAATTGCCCTTGTCCGCCCCGTGATACCTTGGGTCGC 19 90 RC_nif_cluster_1_-_CP001312.1 CDS_0003 intergenic 2221 2376 + up CGGTCGGGTATCCAGAGGCGTTTCGGGCTTGTCAGTGACGGCTATCACAGGAAATTGCCCTTGTCCGCCCCGTGATACCTTGGGTCGCACTCGCCCGCGCGGTGAAAGCCGCGTAAACTCCGCCGACCCTCTCCGCCGCAAAGGCCGCTCGTCCA GCATCTTGGGGGTCTGCGGGGCCATCGGTCGGGTATCCAGAGGCGTTTCGGGCTTGTCAGTGACGGCTATCACAGGAAATTGCCCTTGTCCGCCCCGTGATACCTTGGGTCGCACTCGCCCGCGCGGTGAAAGCCGCGTAAACTCCGCCGACCCTCTCCGCCGCAAAGGCCGCTCGTCCATGCTCGACGCCCTCGACACCCCGGC p_0001 CDS_0008 p_0002 p_0002 8705 112 TGCTAAGCT 1 0.39 poor intergenic + TGCCCCCCTTCCTTTGGCCCTGCGCCAAACTGCGTCTGGCCGCGCCCGTGCATCCTGCTAAGCTGCGGGTG 41 112 RC_nif_cluster_1_-_CP001312.1 CDS_0008 intergenic 8687 8817 - up ATCGAACGACCGGGGTTGGGGGGCGGCCCGGTGGGGTCGGCTGCCCCCCTTCCTTTGGCCCTGCGCCAAACTGCGTCTGGCCGCGCCCGTGCATCCTGCTAAGCTGCGGGTGCGAAAAGGGGGCCTTGCG CTGACGTCATCGTCGGCAAGAACTGATCGAACGACCGGGGTTGGGGGGCGGCCCGGTGGGGTCGGCTGCCCCCCTTCCTTTGGCCCTGCGCCAAACTGCGTCTGGCCGCGCCCGTGCATCCTGCTAAGCTGCGGGTGCGAAAAGGGGGCCTTGCGATGAAAGATCTGAAATTCCGTGTGC p_0002 CDS_0009 p_0003 p_0003 9079 104 AAAGGTTAA 2 1.0 poor intergenic + CAGCCCGCGCATGGCTGCGATATGTGGATTTTTCTCATATTGTCAAAGGGGTAGCAAAGGTTAACACTGGC 36 107 RC_nif_cluster_1_-_CP001312.1 CDS_0009 intergenic 9023 9183 - up AACCCGCGTCCCGCCGCCGGAAGAGGAGGCATGCAGCCCGCGCATGGCTGCGATATGTGGATTTTTCTCATATTGTCAAAGGGGTAGCAAAGGTTAACACTGGCCTTGCCGCAAGCAATTGGCACAAATCGACTCAATCGTTCCGGGAAAGGACACCCCG ACCTTTTGACCGTGCCCGAGGGTTGAACCCGCGTCCCGCCGCCGGAAGAGGAGGCATGCAGCCCGCGCATGGCTGCGATATGTGGATTTTTCTCATATTGTCAAAGGGGTAGCAAAGGTTAACACTGGCCTTGCCGCAAGCAATTGGCACAAATCGACTCAATCGTTCCGGGAAAGGACACCCCGATGAAACTCAGCGCACGCAATATTC p_0003 CDS_0014 p_0004 p_0004 12896 96 CCCGGCTTC 1 0.97 poor intergenic + CCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAAT 25 96 RC_nif_cluster_1_-_CP001312.1 CDS_0014 intergenic 12823 12992 - up AGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGC TCGAGATCGAGCTGCGCAAGATCTGAGGGCGCTTGGAAGACGCGACGGACCCCGGCTTCGGCCGGGGTTTTTGTTTGCGCGCCTGTCGCATTCCCGACAAAAGCGCAGGTTTTGTGCCAATCGCCCCGCCGCGGGCCTGGCACGGTTCTTGCTGCATCCCTGATGACCCAAGCGGGACCAGAACGGAGAGCAGCATGTCGGACAATGTCGTGGCCCTTG p_0004 CDS_0015 p_0005 p_0005 14879 92 TGCAAAAAT 3 0.96 poor intergenic + TTTCCGGCCCCCGGGGCCGGTTCGCCGCATAATTGCGCAATCGACCCGGTGACCTTGCAAAAATGAACCGA 19 90 RC_nif_cluster_1_-_CP001312.1 CDS_0015 intergenic 14731 14971 - up ACCGCCTGCAATCTGCCAGATTTTCCGGCCCCCGGGGCCGGTTCGCCGCATAATTGCGCAATCGACCCGGTGACCTTGCAAAAATGAACCGAACTTGCCTGCCGGACGCGTCGGAAGACGTGCCTTTTTTCGCCCATGCCCTATGGTCAGTGCAGAAGTCCCGACTGCAGCGGCTGCCGCCCGAGTCCCTTGCCCCGGGTCATCCGCCGCGGAAATTCCTTCCTGTGAGGGGGTGACTGC AAACGCTGAAAGTGATCAAATCCTGACCGCCTGCAATCTGCCAGATTTTCCGGCCCCCGGGGCCGGTTCGCCGCATAATTGCGCAATCGACCCGGTGACCTTGCAAAAATGAACCGAACTTGCCTGCCGGACGCGTCGGAAGACGTGCCTTTTTTCGCCCATGCCCTATGGTCAGTGCAGAAGTCCCGACTGCAGCGGCTGCCGCCCGAGTCCCTTGCCCCGGGTCATCCGCCGCGGAAATTCCTTCCTGTGAGGGGGTGACTGCATGACCGATCAACAATCCCGCCCCG p_0005 CDS_0020 p_0006 p_0006 18431 133 TGCATCCGC 1 0.95 poor intergenic + TGCATCCGCGTCACCGCGCCCGGCCCGAAGCTTGCTTTCCCCCGCCCGCATGGTTGGCACGCTTCTTGCTG 62 133 RC_nif_cluster_1_-_CP001312.1 CDS_0020 intergenic 18397 18564 - up AACCGCGATGCGACAATCCCCCCCGGGCTCTGTCGCAAATCCCTCAATGTCGGCCCGAAACTTGCATCCGCGTCACCGCGCCCGGCCCGAAGCTTGCTTTCCCCCGCCCGCATGGTTGGCACGCTTCTTGCTGCATCCCTGATGAACGCATCACAGGGGAGAGCGTC GCGTCGAGGCCGGAGAGGACGACTGAACCGCGATGCGACAATCCCCCCCGGGCTCTGTCGCAAATCCCTCAATGTCGGCCCGAAACTTGCATCCGCGTCACCGCGCCCGGCCCGAAGCTTGCTTTCCCCCGCCCGCATGGTTGGCACGCTTCTTGCTGCATCCCTGATGAACGCATCACAGGGGAGAGCGTCATGATCGAGATCACCCAACCCGCCC p_0006 CDS_0028 p_0007 p_0007 24005 88 TGTCGGATA 1 1.0 poor intergenic + TCCGAAAGCCCCGCCCGTCCGGCGGGGCTTTTCTGTTGCAGGCCGTCCGACAATTTGTCGGATATGCTCCA 20 91 RC_nif_cluster_1_-_CP001312.1 CDS_0028 intergenic 23923 24093 - up AGCGATCCGACAGAGGTTCCGAAAGCCCCGCCCGTCCGGCGGGGCTTTTCTGTTGCAGGCCGTCCGACAATTTGTCGGATATGCTCCAAACCCGGCGCCGTGGCTGCAAAAACCGGGCCGTTTCACCTGGCACGTTGCTTGCTTCATCCCTCCTGACAGGGGGATGCATC GGCTGAAAACCGCGAAAGCCGCCTGAGCGATCCGACAGAGGTTCCGAAAGCCCCGCCCGTCCGGCGGGGCTTTTCTGTTGCAGGCCGTCCGACAATTTGTCGGATATGCTCCAAACCCGGCGCCGTGGCTGCAAAAACCGGGCCGTTTCACCTGGCACGTTGCTTGCTTCATCCCTCCTGACAGGGGGATGCATCATGTCCGAAGCCTTGAAGTCGAAAA p_0007 CDS_0029 p_0008 p_0008 24708 76 GCTTTGGCA 1 0.65 poor intergenic + GCTTTGGCACGGGCTTTGCCCGGCCGCTTCTGTCACATTCTGGATTTGGAACGATTCCATGTTGCAGCGCG 5 76 RC_nif_cluster_1_-_CP001312.1 CDS_0029 intergenic 24632 24784 - up AACGCGCTTTGGCACGGGCTTTGCCCGGCCGCTTCTGTCACATTCTGGATTTGGAACGATTCCATGTTGCAGCGCGGCGACGATCACGCTACCCCCTCGGACCGGGATTTCCGCGGGGACCGACCCCCGCCTGACCGCAGCTGGAGCCAAAG CAATCCCCCTTTGTCCCGAGGGCTGAACGCGCTTTGGCACGGGCTTTGCCCGGCCGCTTCTGTCACATTCTGGATTTGGAACGATTCCATGTTGCAGCGCGGCGACGATCACGCTACCCCCTCGGACCGGGATTTCCGCGGGGACCGACCCCCGCCTGACCGCAGCTGGAGCCAAAGATGAAAACCAACAGCAAATTGCCCG p_0008 CDS_0034 p_0010 p_0010 28332 303 CGACAATTT 2 0.87 poor intergenic + TTCGGGAGCCGGTTTTCCGCGTGTTTTCGGCGCTTTCGCCGCATTGTCGGGTTTCCGACAATTTGTCGGGG 231 302 RC_nif_cluster_1_-_CP001312.1 CDS_0034 intergenic 28213 28635 - up TCGGTCTCCCCGGTTGGCTGTGCCGTCGCGCCAAGGCGTGGCGAAGGGCTTCATCGGGGATCAAGCAAGGGCTGTGCCAAGCGGGCGGATCGCGGCCTGTCGCGCCCCCGCGTGCCCGCCCGCACGCGTGTCCGCGCGCGCATCCGCCCCCGCGCCCGCGATAAAGATGTGAGCGCTCCCGCCGCAGCGGCAAAGCCCGTCGGTTTCGGGGGGAAATCGCCCCGATCACGGCTTCGGGAGCCGGTTTTCCGCGTGTTTTCGGCGCTTTCGCCGCATTGTCGGGTTTCCGACAATTTGTCGGGGCCGCGCCGCGGCTTCTGTCGTCTTGCGGCCCCGCACCCCTGTTTCCTTGGGCTTCCGCGCTTGGCACGGTTCTTGCTGCACATCTGATGCGGCCTGCCCGCAACCACAGGAGTGTTCCC AAGAGGACGAGAAGGAAGTCTTGCATCGGTCTCCCCGGTTGGCTGTGCCGTCGCGCCAAGGCGTGGCGAAGGGCTTCATCGGGGATCAAGCAAGGGCTGTGCCAAGCGGGCGGATCGCGGCCTGTCGCGCCCCCGCGTGCCCGCCCGCACGCGTGTCCGCGCGCGCATCCGCCCCCGCGCCCGCGATAAAGATGTGAGCGCTCCCGCCGCAGCGGCAAAGCCCGTCGGTTTCGGGGGGAAATCGCCCCGATCACGGCTTCGGGAGCCGGTTTTCCGCGTGTTTTCGGCGCTTTCGCCGCATTGTCGGGTTTCCGACAATTTGTCGGGGCCGCGCCGCGGCTTCTGTCGTCTTGCGGCCCCGCACCCCTGTTTCCTTGGGCTTCCGCGCTTGGCACGGTTCTTGCTGCACATCTGATGCGGCCTGCCCGCAACCACAGGAGTGTTCCCTTGTCCGTTCCGCCTTTCACCATCC p_0010 CDS_0035 p_0009 p_0009 28389 176 CCGAAAACA 1 0.95 poor intergenic + AAGCCGCGGCGCGGCCCCGACAAATTGTCGGAAACCCGACAATGCGGCGAAAGCGCCGAAAACACGCGGAA 99 170 RC_nif_cluster_1_-_CP001312.1 CDS_0035 intergenic 28213 28635 + up GGGAACACTCCTGTGGTTGCGGGCAGGCCGCATCAGATGTGCAGCAAGAACCGTGCCAAGCGCGGAAGCCCAAGGAAACAGGGGTGCGGGGCCGCAAGACGACAGAAGCCGCGGCGCGGCCCCGACAAATTGTCGGAAACCCGACAATGCGGCGAAAGCGCCGAAAACACGCGGAAAACCGGCTCCCGAAGCCGTGATCGGGGCGATTTCCCCCCGAAACCGACGGGCTTTGCCGCTGCGGCGGGAGCGCTCACATCTTTATCGCGGGCGCGGGGGCGGATGCGCGCGCGGACACGCGTGCGGGCGGGCACGCGGGGGCGCGACAGGCCGCGATCCGCCCGCTTGGCACAGCCCTTGCTTGATCCCCGATGAAGCCCTTCGCCACGCCTTGGCGCGACGGCACAGCCAACCGGGGAGACCGA GGATGGTGAAAGGCGGAACGGACAAGGGAACACTCCTGTGGTTGCGGGCAGGCCGCATCAGATGTGCAGCAAGAACCGTGCCAAGCGCGGAAGCCCAAGGAAACAGGGGTGCGGGGCCGCAAGACGACAGAAGCCGCGGCGCGGCCCCGACAAATTGTCGGAAACCCGACAATGCGGCGAAAGCGCCGAAAACACGCGGAAAACCGGCTCCCGAAGCCGTGATCGGGGCGATTTCCCCCCGAAACCGACGGGCTTTGCCGCTGCGGCGGGAGCGCTCACATCTTTATCGCGGGCGCGGGGGCGGATGCGCGCGCGGACACGCGTGCGGGCGGGCACGCGGGGGCGCGACAGGCCGCGATCCGCCCGCTTGGCACAGCCCTTGCTTGATCCCCGATGAAGCCCTTCGCCACGCCTTGGCGCGACGGCACAGCCAACCGGGGAGACCGATGCAAGACTTCCTTCTCGTCCTCTT p_0009