##gff-version  3
# Sequence Data: seqnum=1;seqlen=2594;seqhdr="Nitr|CP001842|38883|41477"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="39|Rickettsia_conorii_Malish_7|B|32.4|11|1";gc_cont=32.40;transl_table=11;uses_sd=1
Nitr|CP001842|38883|41477	Prodigal_v2.6.3	CDS	3	446	58.0	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.365;conf=100.00;score=58.01;cscore=54.79;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
Nitr|CP001842|38883|41477	Prodigal_v2.6.3	CDS	518	1693	156.1	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.336;conf=100.00;score=155.43;cscore=152.12;sscore=3.32;rscore=-0.99;uscore=2.06;tscore=2.90;
Nitr|CP001842|38883|41477	Prodigal_v2.6.3	CDS	1885	2592	115.0	-	0	ID=1_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.328;conf=100.00;score=115.01;cscore=111.79;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
# Sequence Data: seqnum=2;seqlen=2615;seqhdr="Nitr|CP001842|206832|209447"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="11|Candidatus_Amoebophilus_asiaticus_5a2|B|35.0|11|0";gc_cont=35.00;transl_table=11;uses_sd=0
Nitr|CP001842|206832|209447	Prodigal_v2.6.3	CDS	3	299	23.3	-	0	ID=2_1;partial=10;start_type=TTG;rbs_motif=TAA;rbs_spacer=15bp;gc_cont=0.411;conf=99.46;score=22.69;cscore=32.32;sscore=-9.63;rscore=-0.44;uscore=1.08;tscore=-9.63;
Nitr|CP001842|206832|209447	Prodigal_v2.6.3	CDS	593	1693	143.3	-	0	ID=2_2;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.368;conf=100.00;score=142.65;cscore=130.15;sscore=12.50;rscore=6.07;uscore=3.61;tscore=3.47;
Nitr|CP001842|206832|209447	Prodigal_v2.6.3	CDS	1938	2615	79.1	+	0	ID=2_3;partial=01;start_type=ATG;rbs_motif=AAA;rbs_spacer=3bp;gc_cont=0.313;conf=100.00;score=79.06;cscore=75.18;sscore=3.88;rscore=-1.81;uscore=2.23;tscore=3.47;
# Sequence Data: seqnum=3;seqlen=2315;seqhdr="Nitr|CP001842|480568|482883"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="39|Rickettsia_conorii_Malish_7|B|32.4|11|1";gc_cont=32.40;transl_table=11;uses_sd=1
Nitr|CP001842|480568|482883	Prodigal_v2.6.3	CDS	2	739	81.0	-	0	ID=3_1;partial=10;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.329;conf=100.00;score=80.40;cscore=75.00;sscore=5.39;rscore=5.83;uscore=-2.68;tscore=2.90;
Nitr|CP001842|480568|482883	Prodigal_v2.6.3	CDS	968	1324	43.4	+	0	ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.345;conf=100.00;score=43.38;cscore=39.89;sscore=3.48;rscore=-0.85;uscore=1.43;tscore=2.90;
Nitr|CP001842|480568|482883	Prodigal_v2.6.3	CDS	1399	1824	50.7	+	0	ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.345;conf=100.00;score=50.68;cscore=47.86;sscore=2.83;rscore=-0.99;uscore=0.92;tscore=2.90;
# Sequence Data: seqnum=4;seqlen=3218;seqhdr="Nitr|CP001842|622336|625554"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="11|Candidatus_Amoebophilus_asiaticus_5a2|B|35.0|11|0";gc_cont=35.00;transl_table=11;uses_sd=0
Nitr|CP001842|622336|625554	Prodigal_v2.6.3	CDS	2	139	1.3	+	0	ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.225;conf=57.66;score=1.34;cscore=-1.38;sscore=2.72;rscore=0.00;uscore=0.00;tscore=3.22;
Nitr|CP001842|622336|625554	Prodigal_v2.6.3	CDS	277	921	96.2	+	0	ID=4_2;partial=00;start_type=ATG;rbs_motif=TATAA;rbs_spacer=11bp;gc_cont=0.366;conf=100.00;score=96.21;cscore=81.04;sscore=15.17;rscore=8.01;uscore=3.69;tscore=3.47;
Nitr|CP001842|622336|625554	Prodigal_v2.6.3	CDS	974	2278	173.1	+	0	ID=4_3;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.320;conf=100.00;score=173.82;cscore=162.19;sscore=11.63;rscore=6.07;uscore=1.39;tscore=3.47;
Nitr|CP001842|622336|625554	Prodigal_v2.6.3	CDS	2419	3021	72.1	-	0	ID=4_4;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=15bp;gc_cont=0.337;conf=100.00;score=72.14;cscore=68.00;sscore=4.14;rscore=-0.44;uscore=1.11;tscore=3.47;
# Sequence Data: seqnum=5;seqlen=23836;seqhdr="Nitr|CP001842|685637|709473"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="39|Rickettsia_conorii_Malish_7|B|32.4|11|1";gc_cont=32.40;transl_table=11;uses_sd=1
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	1	411	47.7	-	0	ID=5_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.338;conf=100.00;score=47.01;cscore=46.97;sscore=0.04;rscore=-0.85;uscore=-1.36;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	568	681	10.1	+	0	ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.377;conf=91.14;score=10.14;cscore=6.68;sscore=3.46;rscore=2.51;uscore=-0.34;tscore=1.29;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	971	1390	50.9	-	0	ID=5_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.295;conf=100.00;score=50.95;cscore=47.54;sscore=3.40;rscore=-0.99;uscore=1.49;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	1537	1743	29.4	-	0	ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.333;conf=99.88;score=29.42;cscore=21.87;sscore=7.55;rscore=4.62;uscore=0.57;tscore=2.36;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	1834	2145	52.7	-	0	ID=5_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.362;conf=100.00;score=53.91;cscore=42.71;sscore=11.20;rscore=7.43;uscore=-0.31;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	2132	3331	173.9	-	0	ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362;conf=100.00;score=173.95;cscore=169.65;sscore=4.30;rscore=2.72;uscore=-1.32;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	3303	3599	17.4	-	0	ID=5_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.293;conf=97.90;score=16.72;cscore=12.98;sscore=3.74;rscore=-0.99;uscore=2.48;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	4727	6202	163.9	+	0	ID=5_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.400;conf=100.00;score=163.86;cscore=159.70;sscore=4.15;rscore=2.72;uscore=-1.46;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	6654	7856	159.8	+	0	ID=5_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.372;conf=100.00;score=159.16;cscore=151.28;sscore=7.88;rscore=2.72;uscore=2.92;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	7937	8821	138.1	+	0	ID=5_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.371;conf=100.00;score=138.08;cscore=132.42;sscore=5.66;rscore=-0.99;uscore=3.75;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	9043	9906	154.0	+	0	ID=5_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.402;conf=100.00;score=153.37;cscore=143.96;sscore=9.41;rscore=7.43;uscore=-0.27;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	10069	11511	229.4	+	0	ID=5_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.398;conf=99.99;score=229.45;cscore=222.43;sscore=7.01;rscore=5.66;uscore=-1.55;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	11623	13152	245.3	+	0	ID=5_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.387;conf=99.99;score=245.30;cscore=239.88;sscore=5.43;rscore=5.66;uscore=-3.13;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	13520	14908	214.7	+	0	ID=5_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.353;conf=99.99;score=214.01;cscore=207.96;sscore=6.05;rscore=5.83;uscore=-2.03;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	14990	16351	164.0	+	0	ID=5_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.355;conf=100.00;score=164.01;cscore=162.01;sscore=2.00;rscore=7.43;uscore=-0.94;tscore=-4.48;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	16400	16798	59.6	+	0	ID=5_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.368;conf=100.00;score=60.38;cscore=49.88;sscore=10.51;rscore=5.66;uscore=1.20;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	17328	17633	36.5	+	0	ID=5_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.320;conf=99.97;score=35.88;cscore=29.90;sscore=5.98;rscore=2.72;uscore=1.01;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	17630	17998	42.4	+	0	ID=5_18;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.285;conf=100.00;score=44.91;cscore=39.27;sscore=5.64;rscore=1.45;uscore=-1.21;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	18012	18782	109.5	+	0	ID=5_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.374;conf=100.00;score=110.67;cscore=107.83;sscore=2.84;rscore=-0.99;uscore=-0.20;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	18865	19221	31.5	+	0	ID=5_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.356;conf=99.93;score=31.50;cscore=30.37;sscore=1.12;rscore=-0.99;uscore=-0.78;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	19388	19645	31.1	+	0	ID=5_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.372;conf=99.92;score=31.12;cscore=27.18;sscore=3.94;rscore=-0.99;uscore=2.03;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	19785	20141	36.8	+	0	ID=5_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.266;conf=99.98;score=36.80;cscore=28.55;sscore=8.24;rscore=5.66;uscore=-0.31;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	20555	22513	201.6	+	0	ID=5_23;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.331;conf=99.99;score=200.95;cscore=194.27;sscore=6.67;rscore=5.83;uscore=-1.40;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	22546	22842	49.1	+	0	ID=5_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.360;conf=100.00;score=50.02;cscore=38.99;sscore=11.03;rscore=7.43;uscore=-0.22;tscore=2.90;
Nitr|CP001842|685637|709473	Prodigal_v2.6.3	CDS	23001	23252	29.4	+	0	ID=5_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.337;conf=99.88;score=29.37;cscore=27.39;sscore=1.98;rscore=-0.99;uscore=0.08;tscore=2.89;
# Sequence Data: seqnum=6;seqlen=2678;seqhdr="Nitr|CP001842|877312|879990"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1
Nitr|CP001842|877312|879990	Prodigal_v2.6.3	CDS	87	752	94.0	+	0	ID=6_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.303;conf=100.00;score=94.04;cscore=80.26;sscore=13.77;rscore=9.86;uscore=1.15;tscore=2.76;
Nitr|CP001842|877312|879990	Prodigal_v2.6.3	CDS	1013	1762	101.4	+	0	ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.347;conf=100.00;score=100.71;cscore=100.64;sscore=0.08;rscore=-1.10;uscore=-0.94;tscore=2.76;
Nitr|CP001842|877312|879990	Prodigal_v2.6.3	CDS	1826	2407	51.5	-	0	ID=6_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.296;conf=100.00;score=51.51;cscore=48.84;sscore=2.67;rscore=-1.10;uscore=1.01;tscore=2.76;
# Sequence Data: seqnum=7;seqlen=2294;seqhdr="Nitr|CP001842|1412857|1415151"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1
Nitr|CP001842|1412857|1415151	Prodigal_v2.6.3	CDS	1	942	106.4	+	0	ID=7_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290;conf=100.00;score=106.42;cscore=103.20;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
Nitr|CP001842|1412857|1415151	Prodigal_v2.6.3	CDS	995	1294	44.3	-	0	ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.373;conf=100.00;score=43.63;cscore=33.66;sscore=9.96;rscore=9.86;uscore=-2.00;tscore=2.76;
Nitr|CP001842|1412857|1415151	Prodigal_v2.6.3	CDS	1606	2292	89.9	-	0	ID=7_3;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.345;conf=100.00;score=89.87;cscore=86.65;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;