##gff-version 3 # Sequence Data: seqnum=1;seqlen=30385;seqhdr="AV_nif_cluster_2_-_CP001157 Azotobacter vinelandii DJ, complete genome" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="36|Ralstonia_solanacearum_PSI07|B|66.1|11|1";gc_cont=66.10;transl_table=11;uses_sd=1 AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 1 714 122.6 + 0 ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.665;conf=100.00;score=122.57;cscore=119.35;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 837 1400 139.2 - 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.608;conf=100.00;score=140.12;cscore=128.11;sscore=12.01;rscore=0.72;uscore=5.84;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 1434 2297 179.9 - 0 ID=1_3;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.647;conf=99.99;score=179.21;cscore=169.22;sscore=9.99;rscore=15.89;uscore=2.88;tscore=-8.13; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 2751 3623 163.3 + 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.590;conf=100.00;score=163.28;cscore=149.97;sscore=13.32;rscore=8.88;uscore=-0.11;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 3750 5228 302.4 + 0 ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.594;conf=99.99;score=302.36;cscore=279.21;sscore=23.14;rscore=15.89;uscore=2.71;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 5329 6900 336.4 + 0 ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.593;conf=99.99;score=336.41;cscore=315.25;sscore=21.16;rscore=15.89;uscore=0.73;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 7032 7250 52.4 + 0 ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.607;conf=100.00;score=52.39;cscore=31.91;sscore=20.48;rscore=13.73;uscore=2.83;tscore=3.92; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 7255 7983 85.4 + 0 ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.682;conf=100.00;score=86.64;cscore=72.48;sscore=14.16;rscore=8.88;uscore=-0.49;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 8007 8276 46.0 + 0 ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607;conf=100.00;score=47.06;cscore=30.55;sscore=16.51;rscore=8.88;uscore=2.07;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 8284 9018 139.9 + 0 ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.686;conf=100.00;score=141.09;cscore=125.42;sscore=15.67;rscore=8.88;uscore=1.05;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 9277 10704 317.8 + 0 ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.676;conf=99.99;score=317.10;cscore=302.87;sscore=14.23;rscore=8.88;uscore=1.46;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 10716 12092 267.5 + 0 ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.674;conf=99.99;score=268.63;cscore=249.01;sscore=19.62;rscore=15.89;uscore=-1.97;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 12097 12573 85.4 + 0 ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.660;conf=100.00;score=86.59;cscore=70.14;sscore=16.45;rscore=10.30;uscore=0.39;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 12604 13086 113.8 + 0 ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.629;conf=100.00;score=114.78;cscore=98.12;sscore=16.66;rscore=8.88;uscore=2.29;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 13106 13315 40.9 + 0 ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.619;conf=99.99;score=41.94;cscore=30.19;sscore=11.76;rscore=7.35;uscore=-0.42;tscore=3.76; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 13599 13754 1.3 + 0 ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.628;conf=53.68;score=0.64;cscore=-6.25;sscore=6.89;rscore=9.73;uscore=-4.46;tscore=2.78; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 13767 14090 65.9 + 0 ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.642;conf=100.00;score=67.08;cscore=44.73;sscore=22.36;rscore=15.89;uscore=0.78;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 14096 14596 83.4 + 0 ID=1_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.677;conf=100.00;score=84.67;cscore=80.76;sscore=3.90;rscore=-3.31;uscore=1.45;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 14593 14970 64.6 + 0 ID=1_19;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.683;conf=100.00;score=65.86;cscore=58.82;sscore=7.03;rscore=15.89;uscore=1.44;tscore=-11.60; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 14967 15725 111.3 + 0 ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.688;conf=100.00;score=115.94;cscore=109.51;sscore=6.43;rscore=-3.31;uscore=0.60;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 15722 16156 58.3 + 0 ID=1_21;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.651;conf=100.00;score=62.91;cscore=56.27;sscore=6.65;rscore=-3.31;uscore=0.81;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 16199 16417 47.8 - 0 ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.594;conf=100.00;score=47.14;cscore=42.84;sscore=4.30;rscore=0.62;uscore=0.40;tscore=3.92; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 16597 17673 137.9 - 0 ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.667;conf=100.00;score=137.29;cscore=124.88;sscore=12.41;rscore=8.88;uscore=-0.37;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 18045 18806 107.0 + 0 ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.689;conf=100.00;score=107.02;cscore=84.09;sscore=22.94;rscore=15.89;uscore=2.50;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 19029 19352 51.2 + 0 ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.577;conf=100.00;score=50.60;cscore=30.18;sscore=20.42;rscore=15.89;uscore=0.63;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 19417 20355 177.6 + 0 ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.641;conf=100.00;score=177.60;cscore=172.38;sscore=5.22;rscore=0.27;uscore=0.41;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 20357 21565 265.4 + 0 ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.652;conf=99.99;score=266.62;cscore=251.55;sscore=15.06;rscore=10.30;uscore=-1.04;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 21638 22792 195.7 + 0 ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674;conf=99.99;score=195.67;cscore=181.18;sscore=14.49;rscore=8.88;uscore=1.06;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 22789 23586 139.0 + 0 ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.668;conf=100.00;score=140.57;cscore=118.84;sscore=21.73;rscore=15.89;uscore=-0.29;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 23615 24154 112.4 + 0 ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.661;conf=100.00;score=113.34;cscore=99.45;sscore=13.89;rscore=8.88;uscore=-0.50;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 24151 24498 96.3 + 0 ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.598;conf=100.00;score=97.55;cscore=79.21;sscore=18.35;rscore=8.88;uscore=3.63;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 24518 24997 100.9 + 0 ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.621;conf=100.00;score=101.92;cscore=79.00;sscore=22.91;rscore=13.97;uscore=3.34;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 24987 25868 150.6 + 0 ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.654;conf=100.00;score=151.86;cscore=131.66;sscore=20.20;rscore=15.89;uscore=-1.45;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 25861 27183 226.1 + 0 ID=1_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.634;conf=99.99;score=227.35;cscore=208.70;sscore=18.65;rscore=8.88;uscore=3.97;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 27428 27970 109.2 + 0 ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589;conf=100.00;score=108.59;cscore=96.36;sscore=12.23;rscore=8.88;uscore=-0.54;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 28287 28667 60.4 - 0 ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.638;conf=100.00;score=59.77;cscore=41.88;sscore=17.88;rscore=10.30;uscore=3.70;tscore=4.54; AV_nif_cluster_2_-_CP001157 Prodigal_v2.6.3 CDS 29411 30385 85.5 + 0 ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.683;conf=100.00;score=85.55;cscore=84.04;sscore=1.51;rscore=-3.31;uscore=0.28;tscore=4.54;