##gff-version 3 # Sequence Data: seqnum=1;seqlen=45705;seqhdr="SA16 T4SS region (45,705 bp)" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="11|Candidatus_Amoebophilus_asiaticus_5a2|B|35.0|11|0";gc_cont=35.00;transl_table=11;uses_sd=0 SA16 Prodigal_v2.6.3 CDS 139 1023 110.0 - 0 ID=1_1;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=14bp;gc_cont=0.434;conf=100.00;score=111.06;cscore=99.52;sscore=11.54;rscore=6.54;uscore=0.45;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 1041 1958 111.5 - 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=3bp;gc_cont=0.419;conf=100.00;score=112.54;cscore=99.41;sscore=13.13;rscore=3.42;uscore=5.24;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 1984 2631 21.7 - 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.366;conf=99.46;score=22.70;cscore=23.45;sscore=-0.75;rscore=-4.87;uscore=-0.36;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 2656 3111 34.0 - 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=3bp;gc_cont=0.364;conf=99.97;score=35.14;cscore=30.57;sscore=4.57;rscore=3.70;uscore=-3.73;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 3125 3988 45.3 - 0 ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.409;conf=100.00;score=46.41;cscore=47.79;sscore=-1.38;rscore=-4.87;uscore=-1.13;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 3972 4838 27.1 - 0 ID=1_6;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.391;conf=99.80;score=27.10;cscore=22.08;sscore=5.02;rscore=5.00;uscore=-3.45;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 4971 6296 163.9 - 0 ID=1_7;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.379;conf=100.00;score=164.71;cscore=150.91;sscore=13.80;rscore=6.54;uscore=3.01;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 6342 7046 99.7 - 0 ID=1_8;partial=00;start_type=ATG;rbs_motif=TAAA;rbs_spacer=14bp;gc_cont=0.417;conf=100.00;score=99.67;cscore=92.69;sscore=6.98;rscore=0.85;uscore=2.67;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 7219 7371 -3.9 - 0 ID=1_9;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.340;conf=67.91;score=3.26;cscore=-1.15;sscore=4.41;rscore=1.53;uscore=-5.92;tscore=2.08; SA16 Prodigal_v2.6.3 CDS 7368 10106 346.9 - 0 ID=1_10;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=9bp;gc_cont=0.331;conf=99.99;score=346.92;cscore=345.07;sscore=1.85;rscore=0.55;uscore=-2.17;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 10278 10586 33.4 - 0 ID=1_11;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.405;conf=99.97;score=34.67;cscore=26.62;sscore=8.04;rscore=2.56;uscore=0.74;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 10586 11410 100.0 - 0 ID=1_12;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=15bp;gc_cont=0.303;conf=100.00;score=101.24;cscore=85.80;sscore=15.43;rscore=6.54;uscore=4.18;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 11413 11622 4.5 - 0 ID=1_13;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.348;conf=73.78;score=4.50;cscore=21.68;sscore=-17.17;rscore=-5.88;uscore=-5.31;tscore=-5.99; SA16 Prodigal_v2.6.3 CDS 11697 12536 85.0 - 0 ID=1_14;partial=00;start_type=ATG;rbs_motif=AAAAAA;rbs_spacer=6bp;gc_cont=0.270;conf=100.00;score=86.31;cscore=81.57;sscore=4.75;rscore=2.49;uscore=-2.48;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 12537 12857 33.8 - 0 ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.343;conf=99.96;score=33.81;cscore=35.52;sscore=-1.71;rscore=-4.87;uscore=-0.30;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 13038 13874 75.7 - 0 ID=1_16;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.281;conf=100.00;score=75.69;cscore=65.72;sscore=9.97;rscore=6.07;uscore=0.43;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 13855 14070 2.1 - 0 ID=1_17;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=4bp;gc_cont=0.398;conf=61.94;score=2.12;cscore=-1.00;sscore=3.12;rscore=1.58;uscore=-0.91;tscore=2.95; SA16 Prodigal_v2.6.3 CDS 14202 15014 77.3 - 0 ID=1_18;partial=00;start_type=ATG;rbs_motif=TAAAAA;rbs_spacer=14bp;gc_cont=0.311;conf=100.00;score=78.61;cscore=69.42;sscore=9.20;rscore=5.59;uscore=-1.13;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 15016 15372 28.0 - 0 ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.415;conf=99.87;score=28.74;cscore=33.26;sscore=-4.51;rscore=-4.87;uscore=-3.82;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 15425 16219 59.2 - 0 ID=1_20;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=13bp;gc_cont=0.316;conf=100.00;score=60.28;cscore=55.26;sscore=5.02;rscore=-0.44;uscore=0.92;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 16239 16418 6.5 - 0 ID=1_21;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=8bp;gc_cont=0.411;conf=81.51;score=6.45;cscore=8.62;sscore=-2.17;rscore=0.39;uscore=-5.01;tscore=2.45; SA16 Prodigal_v2.6.3 CDS 16538 16846 35.5 - 0 ID=1_22;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.379;conf=99.98;score=36.68;cscore=37.50;sscore=-0.83;rscore=-1.81;uscore=-3.67;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 16833 17741 46.0 - 0 ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.310;conf=100.00;score=46.00;cscore=53.60;sscore=-7.60;rscore=-4.87;uscore=-6.20;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 17842 18138 52.4 - 0 ID=1_24;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.333;conf=100.00;score=53.22;cscore=42.76;sscore=10.46;rscore=2.56;uscore=3.59;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 18178 18888 56.9 - 0 ID=1_25;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.267;conf=100.00;score=57.94;cscore=45.56;sscore=12.38;rscore=6.07;uscore=1.82;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 18912 19613 33.6 - 0 ID=1_26;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.291;conf=99.97;score=34.69;cscore=28.24;sscore=6.45;rscore=2.56;uscore=-0.67;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 19630 20304 30.7 - 0 ID=1_27;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.262;conf=99.95;score=33.26;cscore=21.96;sscore=11.30;rscore=6.54;uscore=-1.26;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 20301 21350 112.0 - 0 ID=1_28;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.416;conf=100.00;score=111.33;cscore=120.62;sscore=-9.29;rscore=-4.87;uscore=1.19;tscore=-4.96; SA16 Prodigal_v2.6.3 CDS 21569 21817 35.1 - 0 ID=1_29;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=15bp;gc_cont=0.249;conf=99.97;score=36.01;cscore=20.14;sscore=15.87;rscore=6.43;uscore=5.09;tscore=3.41; SA16 Prodigal_v2.6.3 CDS 21849 22022 20.4 - 0 ID=1_30;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=7bp;gc_cont=0.356;conf=99.24;score=21.18;cscore=19.16;sscore=2.02;rscore=0.49;uscore=-1.61;tscore=2.37; SA16 Prodigal_v2.6.3 CDS 22070 23515 161.7 - 0 ID=1_31;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=3bp;gc_cont=0.391;conf=100.00;score=161.73;cscore=154.79;sscore=6.95;rscore=1.85;uscore=1.63;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 23633 23932 41.4 - 0 ID=1_32;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.363;conf=99.99;score=42.54;cscore=41.55;sscore=0.99;rscore=-1.81;uscore=-1.85;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 23919 24320 17.4 - 0 ID=1_33;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.343;conf=98.19;score=17.38;cscore=14.50;sscore=2.88;rscore=6.07;uscore=1.76;tscore=-4.96; SA16 Prodigal_v2.6.3 CDS 24397 24825 10.5 - 0 ID=1_34;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.247;conf=99.55;score=23.45;cscore=18.69;sscore=4.76;rscore=-4.87;uscore=-6.78;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 24822 25292 29.0 - 0 ID=1_35;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=8bp;gc_cont=0.429;conf=99.89;score=29.70;cscore=27.99;sscore=1.71;rscore=0.55;uscore=-2.98;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 25348 25656 33.5 - 0 ID=1_36;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.401;conf=99.97;score=35.67;cscore=28.36;sscore=7.31;rscore=2.56;uscore=-0.92;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 25656 26477 71.0 - 0 ID=1_37;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.296;conf=100.00;score=72.29;cscore=58.60;sscore=13.69;rscore=6.07;uscore=2.90;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 26480 27940 141.5 - 0 ID=1_38;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.432;conf=100.00;score=142.73;cscore=132.07;sscore=10.66;rscore=6.07;uscore=-0.14;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 27942 28586 45.6 - 0 ID=1_39;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.361;conf=100.00;score=55.76;cscore=51.00;sscore=4.76;rscore=-4.87;uscore=-3.95;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 28583 28867 32.5 - 0 ID=1_40;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.347;conf=99.96;score=33.61;cscore=19.18;sscore=14.42;rscore=6.07;uscore=3.74;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 28880 29290 53.8 - 0 ID=1_41;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.328;conf=100.00;score=53.78;cscore=41.87;sscore=11.91;rscore=6.07;uscore=2.37;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 29368 33813 545.1 - 0 ID=1_42;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.364;conf=99.99;score=546.40;cscore=551.93;sscore=-5.53;rscore=-4.87;uscore=-5.40;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 33815 34972 150.6 - 0 ID=1_43;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.329;conf=100.00;score=151.63;cscore=155.23;sscore=-3.60;rscore=-4.87;uscore=-3.26;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 34992 35240 16.0 - 0 ID=1_44;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=4bp;gc_cont=0.289;conf=97.51;score=15.96;cscore=16.79;sscore=-0.83;rscore=-1.84;uscore=-2.40;tscore=3.41; SA16 Prodigal_v2.6.3 CDS 35203 35661 40.5 - 0 ID=1_45;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=10bp;gc_cont=0.275;conf=99.99;score=40.53;cscore=31.87;sscore=8.66;rscore=5.00;uscore=0.19;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 35731 36021 49.1 - 0 ID=1_46;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=10bp;gc_cont=0.347;conf=100.00;score=48.42;cscore=41.31;sscore=7.11;rscore=0.55;uscore=3.75;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 36320 38971 332.7 - 0 ID=1_47;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406;conf=99.99;score=332.05;cscore=330.80;sscore=1.24;rscore=-4.87;uscore=3.29;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 39345 41204 128.0 - 0 ID=1_48;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.384;conf=100.00;score=128.01;cscore=121.35;sscore=6.66;rscore=6.07;uscore=-2.88;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 41152 41574 47.7 - 0 ID=1_49;partial=00;start_type=ATG;rbs_motif=AAAA;rbs_spacer=11bp;gc_cont=0.352;conf=100.00;score=54.06;cscore=46.75;sscore=7.31;rscore=2.56;uscore=-5.07;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 41574 42002 48.4 - 0 ID=1_50;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=13bp;gc_cont=0.371;conf=100.00;score=47.76;cscore=42.02;sscore=5.74;rscore=-0.44;uscore=3.36;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 42252 42731 30.0 - 0 ID=1_51;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.371;conf=99.92;score=30.94;cscore=36.71;sscore=-5.77;rscore=-4.87;uscore=3.14;tscore=-4.96; SA16 Prodigal_v2.6.3 CDS 42765 43631 60.5 - 0 ID=1_52;partial=00;start_type=GTG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.401;conf=100.00;score=60.54;cscore=57.85;sscore=2.69;rscore=6.07;uscore=1.57;tscore=-4.96; SA16 Prodigal_v2.6.3 CDS 43825 45198 180.9 - 0 ID=1_53;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=11bp;gc_cont=0.385;conf=99.99;score=180.88;cscore=167.87;sscore=13.01;rscore=6.07;uscore=3.47;tscore=3.47; SA16 Prodigal_v2.6.3 CDS 45357 45704 34.0 - 0 ID=1_54;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.385;conf=99.96;score=34.01;cscore=30.79;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;