##gff-version 3 # Sequence Data: seqnum=1;seqlen=2624;seqhdr="Novel_1_context source=docx_extracted accession=CP053602.1 document_region=764657-767280 orientation=novel_gene_5to3 selected_orf=766026-766142 length=2624" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="8|Bacteroides_fragilis_NCTC_9343|B|43.2|11|0";gc_cont=43.20;transl_table=11;uses_sd=0 Novel_1_context Prodigal_v2.6.3 CDS 1 504 42.9 + 0 ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.452;conf=99.99;score=42.85;cscore=39.63;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; Novel_1_context Prodigal_v2.6.3 CDS 546 1124 37.7 + 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=AAAAA;rbs_spacer=5bp;gc_cont=0.520;conf=99.99;score=38.54;cscore=27.69;sscore=10.86;rscore=6.25;uscore=-0.34;tscore=4.12; Novel_1_context Prodigal_v2.6.3 CDS 1801 2124 25.2 + 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=TAA;rbs_spacer=3bp;gc_cont=0.481;conf=99.65;score=24.57;cscore=18.69;sscore=5.88;rscore=0.97;uscore=1.44;tscore=4.12; Novel_1_context Prodigal_v2.6.3 CDS 2108 2584 54.1 + 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=TAAAAA;rbs_spacer=14bp;gc_cont=0.503;conf=100.00;score=55.26;cscore=43.36;sscore=11.90;rscore=6.73;uscore=-0.10;tscore=4.12; # Sequence Data: seqnum=2;seqlen=3370;seqhdr="Novel_2_context source=docx_extracted accession=CP053602.1 document_region=2201535-2204904 orientation=novel_gene_5to3 selected_orf=2203699-2203809 length=3370" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 Novel_2_context Prodigal_v2.6.3 CDS 2 283 46.1 - 0 ID=2_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.564;conf=100.00;score=45.44;cscore=40.19;sscore=5.24;rscore=2.79;uscore=-0.85;tscore=3.95; Novel_2_context Prodigal_v2.6.3 CDS 501 2144 231.6 - 0 ID=2_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.535;conf=99.99;score=231.64;cscore=235.84;sscore=-4.20;rscore=-8.50;uscore=0.35;tscore=3.95; Novel_2_context Prodigal_v2.6.3 CDS 2220 2870 70.1 - 0 ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.527;conf=100.00;score=71.49;cscore=51.42;sscore=20.07;rscore=14.84;uscore=-0.11;tscore=3.95; Novel_2_context Prodigal_v2.6.3 CDS 2870 3370 43.6 - 0 ID=2_4;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.565;conf=100.00;score=43.65;cscore=40.43;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=3;seqlen=2470;seqhdr="Novel_3_context source=docx_extracted accession=CP053602.1 document_region=3588365-3590834 orientation=novel_gene_5to3 selected_orf=3589169-3589258 length=2470" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 Novel_3_context Prodigal_v2.6.3 CDS 2 406 47.7 - 0 ID=3_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563;conf=100.00;score=47.67;cscore=52.59;sscore=-4.92;rscore=-8.50;uscore=-0.37;tscore=3.95; Novel_3_context Prodigal_v2.6.3 CDS 501 800 14.7 - 0 ID=3_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.463;conf=96.15;score=14.00;cscore=16.82;sscore=-2.82;rscore=-8.50;uscore=2.38;tscore=3.95; Novel_3_context Prodigal_v2.6.3 CDS 975 1970 87.8 + 0 ID=3_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.463;conf=100.00;score=87.75;cscore=79.73;sscore=8.02;rscore=2.79;uscore=1.28;tscore=3.95; Novel_3_context Prodigal_v2.6.3 CDS 2012 2449 45.1 - 0 ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.413;conf=100.00;score=45.11;cscore=35.29;sscore=9.82;rscore=10.71;uscore=-4.84;tscore=3.95; # Sequence Data: seqnum=4;seqlen=4315;seqhdr="Novel_4_context source=docx_extracted accession=CP053602.1 document_region=c783701-779387 orientation=novel_gene_5to3 selected_orf=781490-782113 length=4315" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 Novel_4_context Prodigal_v2.6.3 CDS 1 501 69.7 - 0 ID=4_1;partial=10;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.571;conf=100.00;score=72.10;cscore=63.08;sscore=9.02;rscore=3.78;uscore=-1.12;tscore=3.95; Novel_4_context Prodigal_v2.6.3 CDS 501 830 33.2 - 0 ID=4_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.561;conf=99.98;score=37.06;cscore=19.13;sscore=17.93;rscore=12.68;uscore=-2.53;tscore=3.95; Novel_4_context Prodigal_v2.6.3 CDS 827 3388 346.0 - 0 ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.589;conf=99.99;score=347.29;cscore=328.92;sscore=18.37;rscore=14.84;uscore=-1.67;tscore=3.95; Novel_4_context Prodigal_v2.6.3 CDS 3381 3815 30.1 - 0 ID=4_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563;conf=99.90;score=30.10;cscore=48.53;sscore=-18.43;rscore=-8.50;uscore=-3.30;tscore=-6.63; Novel_4_context Prodigal_v2.6.3 CDS 3797 4219 54.3 - 0 ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539;conf=100.00;score=55.37;cscore=38.20;sscore=17.17;rscore=11.19;uscore=0.93;tscore=3.95; Novel_4_context Prodigal_v2.6.3 CDS 4235 4315 2.6 - 0 ID=4_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.494;conf=64.39;score=2.58;cscore=-0.14;sscore=2.72;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=5;seqlen=3624;seqhdr="Novel_5_context source=docx_extracted accession=CP053602.1 document_region=c4186591-4182968 orientation=novel_gene_5to3 selected_orf=4184497-4184736 length=3624" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 Novel_5_context Prodigal_v2.6.3 CDS 2 415 53.7 - 0 ID=5_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.524;conf=100.00;score=53.06;cscore=43.71;sscore=9.35;rscore=4.46;uscore=1.59;tscore=3.95; Novel_5_context Prodigal_v2.6.3 CDS 501 824 40.1 + 0 ID=5_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509;conf=99.99;score=40.10;cscore=22.99;sscore=17.11;rscore=11.19;uscore=1.97;tscore=3.95; Novel_5_context Prodigal_v2.6.3 CDS 827 2413 145.3 - 0 ID=5_3;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.448;conf=100.00;score=144.64;cscore=137.42;sscore=7.22;rscore=4.46;uscore=-0.54;tscore=3.95; Novel_5_context Prodigal_v2.6.3 CDS 2843 3124 23.5 + 0 ID=5_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525;conf=99.55;score=23.52;cscore=10.55;sscore=12.97;rscore=11.19;uscore=-2.16;tscore=3.95; Novel_5_context Prodigal_v2.6.3 CDS 3223 3624 59.4 - 0 ID=5_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.597;conf=100.00;score=59.36;cscore=56.14;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; # Sequence Data: seqnum=6;seqlen=6170;seqhdr="Novel_6_context source=docx_extracted accession=CP053602.1 document_region=c4486066-4479897 orientation=novel_gene_5to3 selected_orf=4481336-4481404 length=6170" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 Novel_6_context Prodigal_v2.6.3 CDS 1 501 43.9 + 0 ID=6_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.407;conf=100.00;score=43.87;cscore=40.65;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; Novel_6_context Prodigal_v2.6.3 CDS 501 1547 58.4 + 0 ID=6_2;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.384;conf=100.00;score=59.69;cscore=59.99;sscore=-0.29;rscore=2.79;uscore=2.26;tscore=-6.63; Novel_6_context Prodigal_v2.6.3 CDS 1604 4858 365.3 - 0 ID=6_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.531;conf=99.99;score=365.29;cscore=369.99;sscore=-4.70;rscore=-8.50;uscore=-0.15;tscore=3.95; Novel_6_context Prodigal_v2.6.3 CDS 4973 5350 7.6 - 0 ID=6_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.537;conf=87.37;score=8.41;cscore=14.95;sscore=-6.54;rscore=-8.50;uscore=-2.78;tscore=3.95; Novel_6_context Prodigal_v2.6.3 CDS 5395 5670 5.7 - 0 ID=6_5;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525;conf=81.35;score=6.41;cscore=0.08;sscore=6.32;rscore=11.19;uscore=1.08;tscore=-6.63; Novel_6_context Prodigal_v2.6.3 CDS 5725 6168 33.0 - 0 ID=6_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.498;conf=99.95;score=32.99;cscore=29.77;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;