##gff-version  3
# Sequence Data: seqnum=1;seqlen=17855;seqhdr="ref|NZ_JAGSPL010000029.1|:c31916-14062 Cognatundibacterium rugosum strain BYS50W NODE_29_length_34525_cov_32.524246, whole genome shotgun sequence"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="47|Xenorhabdus_nematophila_ATCC_19061|B|44.1|11|1";gc_cont=44.20;transl_table=11;uses_sd=1
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	104	1090	95.7	+	0	ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515;conf=100.00;score=95.75;cscore=86.03;sscore=9.72;rscore=3.02;uscore=2.71;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	1222	1980	53.2	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.518;conf=100.00;score=53.19;cscore=60.78;sscore=-7.59;rscore=-7.00;uscore=-4.58;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	1922	2080	1.5	-	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.566;conf=55.01;score=0.87;cscore=-5.44;sscore=6.32;rscore=6.87;uscore=-1.88;tscore=2.49;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	2239	4326	223.6	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529;conf=99.99;score=223.62;cscore=216.04;sscore=7.58;rscore=3.02;uscore=0.57;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	4409	5431	118.7	-	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544;conf=100.00;score=118.00;cscore=109.65;sscore=8.35;rscore=3.02;uscore=2.00;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	5632	6558	73.1	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533;conf=100.00;score=73.13;cscore=73.09;sscore=0.04;rscore=-7.00;uscore=3.05;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	7381	8310	60.3	+	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.494;conf=100.00;score=59.68;cscore=60.55;sscore=-0.86;rscore=-7.00;uscore=2.80;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	8307	10727	183.4	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.469;conf=99.99;score=193.57;cscore=188.29;sscore=5.28;rscore=-7.00;uscore=-1.92;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	10832	11083	6.5	+	0	ID=1_9;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.452;conf=81.65;score=6.49;cscore=13.30;sscore=-6.80;rscore=3.63;uscore=2.10;tscore=-12.53;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	11243	12925	110.5	-	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.501;conf=100.00;score=109.89;cscore=100.45;sscore=9.44;rscore=5.11;uscore=1.00;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	13145	14578	95.8	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.476;conf=100.00;score=95.85;cscore=78.59;sscore=17.26;rscore=9.79;uscore=3.48;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	14583	14861	11.8	+	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459;conf=95.20;score=13.00;cscore=-0.16;sscore=13.16;rscore=11.01;uscore=-2.57;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	15075	15554	33.0	-	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527;conf=99.96;score=34.24;cscore=27.47;sscore=6.77;rscore=3.02;uscore=-1.48;tscore=3.99;
ref|NZ_JAGSPL010000029.1|:c31916-14062	Prodigal_v2.6.3	CDS	15547	17853	161.4	-	0	ID=1_14;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.492;conf=100.00;score=161.41;cscore=158.20;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
chrom	db	type	start	end	name	strand	score	description
CDS_0005	ProPr	promoter	0.0	71.0	prom_0002	+	1.0	ID=p_0002;locus_tag=p_0002;TSS=71.0;class=intergenic;min10seq=AAGGATAAT;min10score=2;min10class=weak;promseq=AGATTTTATTTGTAAGTAATTCATAGATATCCTCATTTATCAAACAAATGTAGTCAAGGATAATGTGCACA
CDS_0010	ProPr	promoter	0.0	71.0	prom_0004	+	1.0	ID=p_0004;locus_tag=p_0004;TSS=71.0;class=intergenic;min10seq=TAGTAATTA;min10score=3;min10class=weak;promseq=TTGGACTTTTCCTTGATGTTTTCATTATGACAATAACAAAAAACTATTATAGTAATTAAGAAAGGGTATCA
CDS_0006	ProPr	promoter	127.0	198.0	prom_0001	+	1.0	ID=p_0001;locus_tag=p_0001;TSS=198.0;class=intergenic;min10seq=AAATAAAAT;min10score=3;min10class=weak;promseq=ACATTATCCTTGACTACATTTGTTTGATAAATGAGGATATCTATGAATTACTTACAAATAAAATCTGAAAA
CDS_0011	ProPr	promoter	131.0	202.0	prom_0003	+	1.0	ID=p_0003;locus_tag=p_0003;TSS=202.0;class=intergenic;min10seq=TGTCATAAT;min10score=3;min10class=weak;promseq=ACCACCAGTGCAAAGCTGATACCCTTTCTTAATTACTATAATAGTTTTTTGTTATTGTCATAATGAAAACA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	5556	5627	1.0	-	.	ID=p_0002;locus_tag=p_0002;TSS=5556;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=AGATTTTATTTGTAAGTAATTCATAGATATCCTCATTTATCAAACAAATGTAGTCAAGGATAATGTGCACA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	5561	5632	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=5632;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=ACATTATCCTTGACTACATTTGTTTGATAAATGAGGATATCTATGAATTACTTACAAATAAAATCTGAAAA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	13074	13145	1.0	-	.	ID=p_0004;locus_tag=p_0004;TSS=13074;Downstream_locus_tag=p_0004;class=intergenic;promoterSeq=TTGGACTTTTCCTTGATGTTTTCATTATGACAATAACAAAAAACTATTATAGTAATTAAGAAAGGGTATCA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	13058	13129	1.0	+	.	ID=p_0003;locus_tag=p_0003;TSS=13129;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=ACCACCAGTGCAAAGCTGATACCCTTTCTTAATTACTATAATAGTTTTTTGTTATTGTCATAATGAAAACA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	104	1090	CDS_0001	+	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_1;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	1222	1980	CDS_0002	-	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=None;conf=100.00;prodigalID=1_2;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	1922	2080	CDS_0003	-	55.01	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=55.01;prodigalID=1_3;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	2239	4326	CDS_0004	+	99.99	ID=CDS_0004;locus_tag=CDS_0004;RBS=GGA/GAG/AGG;conf=99.99;prodigalID=1_4;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	4409	5431	CDS_0005	-	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_5;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	5632	6558	CDS_0006	+	100.00	ID=CDS_0006;locus_tag=CDS_0006;RBS=None;conf=100.00;prodigalID=1_6;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	7381	8310	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=None;conf=100.00;prodigalID=1_7;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	8307	10727	CDS_0008	+	99.99	ID=CDS_0008;locus_tag=CDS_0008;RBS=None;conf=99.99;prodigalID=1_8;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	10832	11083	CDS_0009	+	81.65	ID=CDS_0009;locus_tag=CDS_0009;RBS=AGxAGG/AGGxGG;conf=81.65;prodigalID=1_9;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	11243	12925	CDS_0010	-	100.00	ID=CDS_0010;locus_tag=CDS_0010;RBS=AGGA/GGAG/GAGG;conf=100.00;prodigalID=1_10;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	13145	14578	CDS_0011	+	100.00	ID=CDS_0011;locus_tag=CDS_0011;RBS=AGGA;conf=100.00;prodigalID=1_11;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	14583	14861	CDS_0012	+	95.20	ID=CDS_0012;locus_tag=CDS_0012;RBS=GGAG/GAGG;conf=95.20;prodigalID=1_12;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	15075	15554	CDS_0013	-	99.96	ID=CDS_0013;locus_tag=CDS_0013;RBS=GGA/GAG/AGG;conf=99.96;prodigalID=1_13;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	15547	17853	CDS_0014	-	100.00	ID=CDS_0014;locus_tag=CDS_0014;RBS=None;conf=100.00;prodigalID=1_14;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	5556	5627	1.0	-	.	ID=p_0002;locus_tag=p_0002;TSS=5556;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=AGATTTTATTTGTAAGTAATTCATAGATATCCTCATTTATCAAACAAATGTAGTCAAGGATAATGTGCACA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	5561	5632	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=5632;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=ACATTATCCTTGACTACATTTGTTTGATAAATGAGGATATCTATGAATTACTTACAAATAAAATCTGAAAA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	13074	13145	1.0	-	.	ID=p_0004;locus_tag=p_0004;TSS=13074;Downstream_locus_tag=p_0004;class=intergenic;promoterSeq=TTGGACTTTTCCTTGATGTTTTCATTATGACAATAACAAAAAACTATTATAGTAATTAAGAAAGGGTATCA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	promoter	13058	13129	1.0	+	.	ID=p_0003;locus_tag=p_0003;TSS=13129;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=ACCACCAGTGCAAAGCTGATACCCTTTCTTAATTACTATAATAGTTTTTTGTTATTGTCATAATGAAAACA
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	104	1090	CDS_0001	+	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_1;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	1222	1980	CDS_0002	-	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=None;conf=100.00;prodigalID=1_2;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	1922	2080	CDS_0003	-	55.01	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=55.01;prodigalID=1_3;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	2239	4326	CDS_0004	+	99.99	ID=CDS_0004;locus_tag=CDS_0004;RBS=GGA/GAG/AGG;conf=99.99;prodigalID=1_4;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	4409	5431	CDS_0005	-	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_5;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	5632	6558	CDS_0006	+	100.00	ID=CDS_0006;locus_tag=CDS_0006;RBS=None;conf=100.00;prodigalID=1_6;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	7381	8310	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=None;conf=100.00;prodigalID=1_7;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	8307	10727	CDS_0008	+	99.99	ID=CDS_0008;locus_tag=CDS_0008;RBS=None;conf=99.99;prodigalID=1_8;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	10832	11083	CDS_0009	+	81.65	ID=CDS_0009;locus_tag=CDS_0009;RBS=AGxAGG/AGGxGG;conf=81.65;prodigalID=1_9;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	11243	12925	CDS_0010	-	100.00	ID=CDS_0010;locus_tag=CDS_0010;RBS=AGGA/GGAG/GAGG;conf=100.00;prodigalID=1_10;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	13145	14578	CDS_0011	+	100.00	ID=CDS_0011;locus_tag=CDS_0011;RBS=AGGA;conf=100.00;prodigalID=1_11;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	14583	14861	CDS_0012	+	95.20	ID=CDS_0012;locus_tag=CDS_0012;RBS=GGAG/GAGG;conf=95.20;prodigalID=1_12;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	15075	15554	CDS_0013	-	99.96	ID=CDS_0013;locus_tag=CDS_0013;RBS=GGA/GAG/AGG;conf=99.96;prodigalID=1_13;
ref|NZ_JAGSPL010000029.1|:c31916-14062	ProPr	gene	15547	17853	CDS_0014	-	100.00	ID=CDS_0014;locus_tag=CDS_0014;RBS=None;conf=100.00;prodigalID=1_14;