##gff-version 3 # Sequence Data: seqnum=1;seqlen=9907;seqhdr="NC_025416_MCE-2014 Concatenation of 2 sequences" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="0|Mycoplasma_bovis_PG45|B|29.3|4|1";gc_cont=29.30;transl_table=4;uses_sd=1 NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 3 305 33.6 + 0 ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.290;conf=99.96;score=33.57;cscore=30.35;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 299 484 18.0 + 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.290;conf=98.81;score=19.22;cscore=6.34;sscore=12.87;rscore=10.60;uscore=-1.88;tscore=2.88; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 884 1171 32.4 + 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.288;conf=99.93;score=31.79;cscore=16.38;sscore=15.41;rscore=13.71;uscore=-1.59;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 1171 1464 27.4 + 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.347;conf=99.93;score=31.74;cscore=12.80;sscore=18.94;rscore=13.71;uscore=-3.06;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 1468 1725 39.2 + 0 ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.283;conf=99.99;score=40.40;cscore=22.57;sscore=17.83;rscore=13.71;uscore=-1.06;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 1833 2072 28.2 + 0 ID=1_6;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.308;conf=99.85;score=28.25;cscore=18.12;sscore=10.13;rscore=9.91;uscore=-3.51;tscore=3.74; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 2083 2427 51.9 + 0 ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.310;conf=100.00;score=53.05;cscore=38.07;sscore=14.98;rscore=14.49;uscore=-4.61;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 2628 2966 73.1 - 0 ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.204;conf=100.00;score=72.49;cscore=54.78;sscore=17.71;rscore=8.70;uscore=5.72;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 3277 3585 36.5 + 0 ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.362;conf=99.98;score=36.48;cscore=16.88;sscore=19.61;rscore=11.23;uscore=4.44;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 3791 4075 46.0 + 0 ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.340;conf=100.00;score=45.36;cscore=29.22;sscore=16.14;rscore=8.70;uscore=4.15;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 4150 4341 24.5 + 0 ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.177;conf=99.64;score=24.51;cscore=11.60;sscore=12.91;rscore=6.58;uscore=3.35;tscore=2.98; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 4672 5160 57.4 - 0 ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.309;conf=100.00;score=56.70;cscore=37.28;sscore=19.42;rscore=13.71;uscore=2.42;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 5327 5485 13.9 + 0 ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.226;conf=96.04;score=13.87;cscore=3.13;sscore=10.73;rscore=9.04;uscore=-0.76;tscore=2.46; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 5558 5689 18.5 + 0 ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.242;conf=98.60;score=18.49;cscore=9.75;sscore=8.74;rscore=4.49;uscore=2.22;tscore=2.03; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 5855 6178 56.9 + 0 ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333;conf=100.00;score=56.91;cscore=41.99;sscore=14.93;rscore=8.70;uscore=2.29;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 6278 6679 55.7 + 0 ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303;conf=100.00;score=55.68;cscore=43.31;sscore=12.37;rscore=8.70;uscore=-0.27;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 7176 7397 41.1 + 0 ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.333;conf=99.99;score=40.40;cscore=26.54;sscore=13.87;rscore=7.62;uscore=3.45;tscore=3.45; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 7477 7575 5.3 + 0 ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.394;conf=77.25;score=5.32;cscore=-2.21;sscore=7.53;rscore=5.56;uscore=0.95;tscore=1.51; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 7657 7821 21.7 + 0 ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.303;conf=99.32;score=21.69;cscore=12.52;sscore=9.17;rscore=5.64;uscore=0.98;tscore=2.55; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 8061 8297 23.7 + 0 ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.354;conf=99.51;score=23.08;cscore=8.57;sscore=14.51;rscore=8.14;uscore=3.33;tscore=3.69; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 8378 8728 65.7 + 0 ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.305;conf=100.00;score=65.68;cscore=49.92;sscore=15.76;rscore=5.66;uscore=6.16;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 8797 8961 22.5 + 0 ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.291;conf=99.44;score=22.51;cscore=17.92;sscore=4.59;rscore=8.88;uscore=-6.85;tscore=2.55; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 8974 9147 21.5 + 0 ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.356;conf=99.45;score=22.60;cscore=13.12;sscore=9.48;rscore=9.38;uscore=-3.74;tscore=2.70; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 9147 9416 3.6 + 0 ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.396;conf=96.23;score=14.10;cscore=8.87;sscore=5.22;rscore=-5.22;uscore=-4.04;tscore=3.94; NC_025416_MCE-2014 Prodigal_v2.6.3 CDS 9518 9685 32.0 + 0 ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.250;conf=99.94;score=32.03;cscore=21.20;sscore=10.83;rscore=5.74;uscore=2.49;tscore=2.60;