chrom ID TSS locus_tag min10seq min10score strand score class promoterSeq locus_tag_intergenic startIntergenic endIntergenic 4882_pRCS46all_(246348 p_0001 1860 p_0001 ATATATAAT 5 - 1.0 intergenic TCCGCAGCCGGAAGGGCTTTGTCCCACACAAACAATTCCAATCGACAGCAGCATGATATATAATTATGATA CDS_0003 1806 1959 4882_pRCS46all_(246348 p_0003 2868 p_0003 TACTATGTA 2 - 0.99 intergenic AAGCGGAGGCGTATTCTTGCCCCTCCCCCTCGTTGCATGATGGTCTAAATCTGTCTACTATGTAACCAATG CDS_0004 2834 3151 4882_pRCS46all_(246348 p_0002 2971 p_0002 TCAATCTAA 2 - 1.0 intergenic CACATTTCTGGCTTGCCCCGCGCTTTTCTTCTTTCTCTCTTTTTCTCTCTCTTTCTCAATCTAATCTCACA CDS_0004 2834 3151 4882_pRCS46all_(246348 p_0005 6786 p_0005 TGTAAAATT 3 - 1.0 intergenic CGTTTTTTCAGCAAGTATGTTCCAGCGAGACATCTTATACCATTCCATCCAAATCTGTAAAATTACCGTAT CDS_0010 6642 6904 4882_pRCS46all_(246348 p_0004 6787 p_0004 ATCATAATT 3 + 1.0 intergenic ACATTTTAATAAGTAGAACAACAGCAAGAGGAACTCAAATTTATTTACCGTAATTATCATAATTACGGTAA CDS_0011 6642 6904 4882_pRCS46all_(246348 p_0006 19586 p_0006 TGCATAATA 3 - 1.0 intergenic ATAATTGCTCACAGCCAAACTATCAGGTCAAGTCTGCTTTTATTATTTTTAAGCGTGCATAATAAGCCCTA CDS_0027 19566 19749 4882_pRCS46all_(246348 p_0007 20995 p_0007 TGACGATTT 2 - 0.35 intergenic GCAATTGATAACGGCGTTATGCTCTGTGAGCCTGGTTATTGGCGAAGCGAAAGTATGACGATTTCAGCAAT CDS_0028 20975 21126 4882_pRCS46all_(246348 p_0008 23425 p_0008 TAAATTGCG 1 + 1.0 intergenic TAAATTGCGTCAGGATAGGATTGAATTTTGAATTTATTGACATATCTCGTTGAAGGTCATAGAGTCTTCCC CDS_0032 23321 23531 4882_pRCS46all_(246348 p_0009 25919 p_0009 TGCTAATTG 2 + 1.0 intergenic CCACTCTATTGTAAACAAGACATTTTTATCTTTTATATTCAATGGCTTATTTTCCTGCTAATTGGTAATAC CDS_0035 25842 26150 4882_pRCS46all_(246348 p_0010 29515 p_0010 TGTTATATT 3 + 1.0 intergenic GCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCCTCTGATGTTATATTGCACAAG CDS_0039 29430 29581 4882_pRCS46all_(246348 p_0013 34859 p_0013 TAGTGTTTT 1 - 0.99 intergenic TATCCACCTTAACTTAATGATTTTTACCAAAATCATTAGGGGATTCATCAGCGTATAGTGTTTTGCAGTTT CDS_0044 34844 34987 4882_pRCS46all_(246348 p_0012 34928 p_0012 ATTAAGTTA 2 + 1.0 intergenic CTAAACTGCAAAACACTATACGCTGATGAATCCCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGA CDS_0045 34844 34987 4882_pRCS46all_(246348 p_0014 36032 p_0014 TGATCAAAT 2 + 1.0 intergenic CCCTAATGATTTTGGTAAAAATCATTAAGTTAAGGTGGATACACATCTTGTCATATGATCAAATGGTTTCG CDS_0046 35955 36059 4882_pRCS46all_(246348 p_0015 49478 p_0015 AGGCTAAAA 2 + 0.15 intergenic AAAGATTGCTTTTAGATTGCTTTTCGATTGCTTGCCGCGTGTTGGATAGAGAATAAGGCTAAAAGCGGGGA CDS_0059 49397 49896 4882_pRCS46all_(246348 p_0017 49687 p_0017 TATATTTAA 3 - 1.0 intergenic ATCTATCTGGAATCTTGATGCTCTTATTCTTTCACAGCCTCTTTACATATGAATCTATATTTAAAGATTCC CDS_0058 49397 49896 4882_pRCS46all_(246348 p_0016 49742 p_0016 AAAGAATAA 3 + 1.0 intergenic CATATCCAATATATCTGGAATCTTTAAATATAGATTCATATGTAAAGAGGCTGTGAAAGAATAAGAGCATC CDS_0059 49397 49896 4882_pRCS46all_(246348 p_0018 51891 p_0018 CAGAAGAAA 2 + 1.0 intergenic ATCTCCCACCCCCCAGGGAAAAGAAAGATAGGCGCGTCAGCGCCTTTTTTTATGCCAGAAGAAAGCGCACA CDS_0062 51812 52140 4882_pRCS46all_(246348 p_0022 54454 p_0022 TTTTATAAT 5 - 1.0 intergenic ATCAAGTTCTCCTGAGTGATTAGTCGTTCTGAAAACTTTACTTTTCACAGTATCATTTTATAATACTGTAA CDS_0065 54416 54685 4882_pRCS46all_(246348 p_0019 54487 p_0019 TAAAATGAT 2 + 1.0 intergenic AAGTCGCTCTTTTTTCTTTACTGGGTTGTTTTTATGATTTACAGTATTATAAAATGATACTGTGAAAAGTA CDS_0066 54416 54685 4882_pRCS46all_(246348 p_0021 54545 p_0021 ACCGAAAAA 2 - 0.67 intergenic GCCACTTCTTGATGATTTCCAATCAGCAGCGGCAGGTTGCCCCTGAACTAACCTCACCGAAAAACCACCTT CDS_0065 54416 54685 4882_pRCS46all_(246348 p_0020 54641 p_0020 TCAGGGGCA 1 + 0.55 intergenic TCAGGGGCAACCTGCCGCTGCTGATTGGAAATCATCAAGAAGTGGCTTTTTGGTGGGGTTACGGTTTGAAG CDS_0066 54416 54685 4882_pRCS46all_(246348 p_0023 56426 p_0023 GAATCAGGG 1 + 1.0 intergenic GAATCAGGGTTGCCCGAATTGGGCAGCTAGGCGGGGTTGCATTTTTGAAAAGTCCTGTACGCTGGTTGGTA CDS_0069 56343 56440 4882_pRCS46all_(246348 p_0025 64983 p_0025 CTATATTAA 3 - 1.0 intergenic CCCCATCGCCGCCGATTTTTCTTGATTATAGGTTTGAATCTATATAGGATTGCACCTATATTAAGTAAGGA CDS_0085 64977 65140 4882_pRCS46all_(246348 p_0026 65760 p_0026 ATCATAAAA 3 + 1.0 intergenic CCAGAAAACTTTCACATGTGAAAGTCTTGCAAGGTGTCTTTTTATTGTTTACAGTATCATAAAATGAATCT CDS_0087 65688 66029 4882_pRCS46all_(246348 p_0027 65966 p_0027 CAGAATTGA 1 + 0.54 intergenic TTTCCGGGATAGCTTGGAAGGCGCAACTCATTGTTGCCCATGAAAGAGGCAGAATTGACAGCCTGGCTGTC CDS_0087 65688 66029 4882_pRCS46all_(246348 p_0029 67438 p_0029 TAGGATAAA 2 - 1.0 intergenic CACCTCTTTTTGAATGAAAAATGCCCTTTCACAGTTGCATTTTTTAATGCTGTGATAGGATAAAAGTGTAA CDS_0090 67418 67515 4882_pRCS46all_(246348 p_0028 67492 p_0028 TGTGAAAGG 1 + 1.0 intergenic CATCTCTCCTTTTCAACTTACACTTTTATCCTATCACAGCATTAAAAAATGCAACTGTGAAAGGGCATTTT CDS_0091 67418 67515 4882_pRCS46all_(246348 p_0030 68575 p_0030 TCACATAAT 2 + 1.0 intergenic GGAAAATTACTTCGGAAGGGCGGCTATGGCCGCTTTCTTTTTAATATTTACAGCATCACATAATGATACTA CDS_0093 68503 68607 4882_pRCS46all_(246348 p_0031 68942 p_0031 TGTAAATGC 2 + 1.0 intergenic GTAAAAACGGCTATGCCGTTTTTTATTTGTCTATTACGGCATCACATTATAAGCCTGTAAATGCTGAATCT CDS_0094 68870 69065 4882_pRCS46all_(246348 p_0032 76401 p_0032 TGCTATAAA 3 + 1.0 intergenic GTACTGTAAAGCGCCGGGTTTTTTATGCCGCCCTGTTTACAGTATCAAAAAGTGATGCTATAAAGTGAGCA CDS_0105 76306 76423 4882_pRCS46all_(246348 p_0033 80478 p_0033 ACCATAATT 3 + 1.0 intergenic TTGTCAATAAGCGGCCTTCATGGCCGTTTTTTTGTTTAAAGTTTGTTTTAACAGAACCATAATTAGATATT CDS_0112 80396 80570 4882_pRCS46all_(246348 p_0036 85301 p_0036 ATATTATTT 3 - 1.0 intergenic GGGAGACTTTCACATGTGAAAGTTTTGTTTCTTGGTATCGTTTTATTGTCCCTTGATATTATTTTATGATG CDS_0117 85214 85533 4882_pRCS46all_(246348 p_0034 85339 p_0034 ACAATAAAA 3 + 1.0 intergenic GAGCGATGCGGCCCTTATTTATGATTATTACAGCATCATAAAATAATATCAAGGGACAATAAAACGATACC CDS_0118 85214 85533 4882_pRCS46all_(246348 p_0035 85502 p_0035 TGGCTATAT 3 + 1.0 intergenic CGCGTAAGCGTCCGATAGAAAGTAATTGTTAGTGAGATATTGACTACACGGAATATGGCTATATCATAGAA CDS_0118 85214 85533 4882_pRCS46all_(246348 p_0037 95538 p_0037 TTTTAGAAT 2 - 0.49 intergenic CACGCCTATCTGTCCAATTTGGGCAGTTTGAGAAACCAGCTTTCCATCCCCCCCCTTTTAGAATGGGCTCA CDS_0133 95510 95678 4882_pRCS46all_(246348 p_0038 103310 p_0038 TGCCCAAAA 2 + 0.22 intergenic GTGAAAGTTTTTCGCCTCCCGCTCTTATCATCTCCTCGAATAAACCTCCATAAAGTGCCCAAAATGGGCCG CDS_0141 103204 103385 4882_pRCS46all_(246348 p_0039 103990 p_0039 GCAAAAAAG 1 + 0.9 intergenic GCAAAAAAGGCGGCTTAGGCCGCCTTTTTTTATTTGTCGCTGGAAGTGCCCGAAAAGGGCGCGAAGCCGTG CDS_0143 103905 104050 4882_pRCS46all_(246348 p_0040 108251 p_0040 TCCTTATTT 2 + 1.0 intergenic AAAAGCTGCCCTTATTTTTTGGCAAAAAGTCCAGTCATAACAAATTCCAACTATTTCCTTATTTGCTCAAA CDS_0149 108139 108340 4882_pRCS46all_(246348 p_0041 113954 p_0041 TGGGCTATT 2 + 0.88 intergenic TCAAAGCCCGGTTCAGACCGGGCTTTTTTTTGTATCGCGCTGGAATTGTCCAAATTGGGCTATTACAGAGG CDS_0150 113871 114020 4882_pRCS46all_(246348 p_0042 124795 p_0042 TGCATTTTT 3 - 1.0 intergenic ACCCAGCCCAAACCTTTGCCCCTCGCCCGAGGGGCTTTTTTTTGTCTTTTATGGTTGCATTTTTTGATGCT CDS_0158 124743 124866 4882_pRCS46all_(246348 p_0043 125649 p_0043 AGCTATATT 3 + 1.0 intergenic ACCTCTCGAAGTGCCCAAAATGGACAGTTACAGCGTTTTCTGTTTAGCAAAGGTGAGCTATATTTGAATCA CDS_0160 125507 125801 4882_pRCS46all_(246348 p_0044 126759 p_0044 AGCAAATTA 3 + 0.93 intergenic GATTTTGTTCTCTTCGGAGAGCGAAAAGTGCGATAGCTGGTCGCCAAAAACAAACAGCAAATTAACGTTAA CDS_0163 126610 126830 4882_pRCS46all_(246348 p_0045 131594 p_0045 AGCAAATTA 3 + 0.93 intergenic GATTTTGTTCTCTTCGGAGAGCGAAAAGTGCGATAGCTGGTCGCCAAAAACAAACAGCAAATTAACGTTAA CDS_0168 131465 131665 4882_pRCS46all_(246348 p_0046 136693 p_0046 TTCGAAATT 2 + 1.0 intergenic ATTCTACGTCAGTACTTCAAAAAGCATAATCAAAGCCTTGATAAATATGCATTCCTTCGAAATTCAGCTTT CDS_0173 136615 136804 4882_pRCS46all_(246348 p_0047 138138 p_0047 GTTTATTAA 3 + 1.0 intergenic AAGAATATCATCAATAAAATTGAGTGTTGCTCTGTGGATAACTTGCAGAGTTTATTAAGTATCATTGCAGC CDS_0174 138066 138319 4882_pRCS46all_(246348 p_0048 149670 p_0048 TGTCATACT 2 + 1.0 intergenic CTTTTTCTTTTGCACCCCAAAAGGGCAATTACAGCGTTTTACCCTTTTAGGTGGCTGTCATACTCTTTGTT CDS_0190 149579 149781 4882_pRCS46all_(246348 p_0049 152866 p_0049 ATTTATTAA 3 + 1.0 intergenic GAGGGCGAAAGCGTGCGATAGCTGGTCGCCAAAAACAAACAGCAAATTAACGTTAATTTATTAATCCCTGC CDS_0196 152712 152917 4882_pRCS46all_(246348 p_0050 157624 p_0050 AGCATAAAA 3 + 0.48 intergenic TAAAAGGGCAAAAACGCAGTCGTTGATAACGACTCTCCCACCTGAAAATAGCTCCAGCATAAAAACTGGAG CDS_0203 157498 157631 4882_pRCS46all_(246348 p_0054 173719 p_0054 TGGATAATA 3 - 1.0 intergenic CAGTGTAGCGTAATCAATTAGTTATTGATTACGTTGTCGGTGGTAACTCTTATTATGGATAATATGTTAAA CDS_0210 173708 174046 4882_pRCS46all_(246348 p_0051 173797 p_0051 TATTATCCA 1 + 1.0 intergenic TATTATCCATAATAAGAGTTACCACCGACAACGTAATCAATAACTAATTGATTACGCTACACTGGTTGTCA CDS_0211 173708 174046 4882_pRCS46all_(246348 p_0053 173821 p_0053 TGAATGACT 1 - 0.98 intergenic AGAAGAAACTAGAGCACCGTCTCGCTTGTTTATGCTGCTTTTACCGTTCATCCCTTGAATGACTGGTGCCA CDS_0210 173708 174046 4882_pRCS46all_(246348 p_0052 173970 p_0052 TATCATTTT 2 + 1.0 intergenic CCTTCAAAAGCAAACTTCTTGATGCGGTGCCGTTTGTAATCGTCCCCGTTCCGGGTATCATTTTGCGAACT CDS_0211 173708 174046 4882_pRCS46all_(246348 p_0055 175731 p_0055 TGATAAGTT 2 + 1.0 intergenic CTGAAAATGCTGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACC CDS_0213 175591 176027 4882_pRCS46all_(246348 p_0057 175837 p_0057 TGTAAAAAT 4 - 1.0 intergenic CATATCCTTCTTTCTCGGTTTTCACCGCAGATCCGAAAAAATGTAAATCGGGAAATGTAAAAATTGTTCAC CDS_0212 175591 176027 4882_pRCS46all_(246348 p_0056 175900 p_0056 TGAAAACCG 1 + 1.0 intergenic CGCTGACTGTGAACAATTTTTACATTTCCCGATTTACATTTTTTCGGATCTGCGGTGAAAACCGAGAAAGA CDS_0213 175591 176027 4882_pRCS46all_(246348 p_0058 181684 p_0058 TGAAAATGT 2 + 1.0 intergenic CCTCCGGGGCTGGCCTTTTTGTTTTGACCAGTCCCAAAATTTTGTCAAAGCTCAGTGAAAATGTCCAATCA CDS_0222 181605 181815 4882_pRCS46all_(246348 p_0059 183304 p_0059 AAGTTAATT 3 + 1.0 intergenic ACACCCGAACTTTACCCCGGCTTCCCGACTTTTTCCTTTGTATATAATATCATTGAAGTTAATTGCATTTC CDS_0224 183153 183662 4882_pRCS46all_(246348 p_0060 183450 p_0060 CTTTATTAT 3 + 0.96 intergenic CTGATTTGCGTCAAGTTCACCTTTTACCAAAGATGGCCTCAGAGCTCCCCTGAAGCTTTATTATGGCTTCA CDS_0224 183153 183662 4882_pRCS46all_(246348 p_0061 186015 p_0061 TTATTTAAT 3 - 1.0 intergenic AGTGAAACATTAATATATATAATTTTTACCAATTAATTGGTGACGTTAATTATTTAATTTATCAGTTAATA CDS_0225 185974 186086 4882_pRCS46all_(246348 p_0064 187024 p_0064 TGCTTTGAT 2 - 0.99 intergenic CAATAAACAGCGTAGACGGGCATTTTTCAGCCCAGGAGAAAGGCCTTCACCGCTATGCTTTGATACCGAAA CDS_0226 186976 187249 4882_pRCS46all_(246348 p_0062 187100 p_0062 GCTGTTTAT 2 + 1.0 intergenic GTATCAAAGCATAGCGGTGAAGGCCTTTCTCCTGGGCTGAAAAATGCCCGTCTACGCTGTTTATTGCTAAG CDS_0227 186976 187249 4882_pRCS46all_(246348 p_0063 187224 p_0063 TGTCACTTA 2 + 0.87 intergenic ACATCAAAAAACCGCTGTACAGCTCATCTCTGGCCATACCTTTTCAGCATCAAAATGTCACTTAAGGGTAT CDS_0227 186976 187249 4882_pRCS46all_(246348 p_0066 197195 p_0066 AAAATAAAT 3 - 1.0 intergenic TCTGCGACAAACCTGAACTGTGTTTTACTGATTTATCTAGATATGCTTAGAAAACAAAATAAATTTTTCAT CDS_0237 197103 197546 4882_pRCS46all_(246348 p_0065 197421 p_0065 TTTGAATAA 3 - 0.99 intergenic GTTCGATTTATTCAACAAAGCCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAA CDS_0237 197103 197546 4882_pRCS46all_(246348 p_0067 203712 p_0067 GGCTGGTCG 1 + 1.0 intergenic GGCTGGTCGATGAAGCCGACACTGTCGCGCGAGCTGGCACTGGATGCGCTGCTGATGGCGGTCTGGCGACG CDS_0245 203486 204028 4882_pRCS46all_(246348 p_0068 209105 p_0068 TGCATATCA 2 - 1.0 intergenic CGGGAATCAAGGCATTGCGATTCTCGAAAATAGTTCTTGAAATTCTATTCTTGATTGCATATCATCTCAAC CDS_0253 209081 209240 4882_pRCS46all_(246348 p_0072 221336 p_0072 AGCGTGACG 1 - 1.0 intergenic AGCGTGACGATAATCCAGATCGCCTGCCGGATAATGGTGCCAACTTACTGATTTAGTGTACGATGGTGTCT CDS_0265 221323 221475 4882_pRCS46all_(246348 p_0073 223154 p_0073 TGTATATTA 3 - 0.82 intergenic GTATGGGGCGAAGCGTTGACAGGGGTGTTGACAGGCCAGCCATTGAGCCACGAAATGTATATTAAATTACC CDS_0266 222962 223368 4882_pRCS46all_(246348 p_0076 227350 p_0076 TGTTCAAAA 2 - 1.0 intergenic CTGTTGAGAGCGAAATCAAAACAATATGATTTTTTTCTTGCAACATGACACTTTTTGTTCAAAATGACAAA CDS_0270 227331 227746 4882_pRCS46all_(246348 p_0075 227572 p_0075 CTCATACAA 1 + 0.39 intergenic CTCATACAAAAGGGCTTTGAGAAAGGTATTCAACTTGCAAGACAGGAGAGTCATTCAGAAGGATTCTGATT CDS_0271 227331 227746 4882_pRCS46all_(246348 p_0077 231825 p_0077 ATTGCCGCA 1 - 0.55 intergenic ATTGCCGCAGAGCTTAACCCTCAGCATGAACTGCTCTCCGGAGCGGATGCCCTGCAGGCTTTCGCGGGGTC CDS_0275 231783 231941 4882_pRCS46all_(246348 p_0080 236207 p_0080 TGGTAAGTT 2 - 1.0 intergenic AGCAAAAGTTCGATTTATTCAACAAAGCCGCCGTTATGTTAAAAAACTGTCCAAATGGTAAGTTTCCGGCG CDS_0282 236057 236282 4882_pRCS46all_(246348 p_0079 236247 p_0079 GTTTTTTAA 3 + 0.99 intergenic CCAGCCAAAGAACCATCAAAATAATCAGCAACGCCGGAAACTTACCATTTGGACAGTTTTTTAACATAACG CDS_0283 236057 236282 4882_pRCS46all_(246348 p_0081 237375 p_0081 CCCATTTGA 1 + 1.0 intergenic CCCATTTGATCTGGAAAGTTGAGGGTGATTTGTCACAGTTTTGCTGTTCCCTCCCTGGCATCCTGCGCTTA CDS_0284 237250 237536 4882_pRCS46all_(246348 p_0082 237533 p_0082 TGTTTTTGA 2 + 1.0 intergenic ATTTTCTCCCTCTTCCCGGGTAATGGTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTC CDS_0284 237250 237536 4882_pRCS46all_(246348 p_0083 241682 p_0083 TTTGTTAAT 2 - 0.29 intergenic AGAATAATCACGGTAGAGGTAAACAGCGTGATGTTGACTTCAAAGGGGCTTTGTTAATGGAATGGTCGCCT CDS_0287 241621 241758 4882_pRCS46all_(246348 p_0085 242349 p_0085 TGCAAAAAC 3 - 0.99 intergenic CCCATTCAGACGCCGGATAGATTCAAGCAAGCCAATTTATCGTCAAAATCGGTGTTGCAAAAACGGGAGTG CDS_0289 242318 242597 4882_pRCS46all_(246348 p_0084 242521 p_0084 TGATACTAA 2 - 0.89 intergenic AGAAATACACCGGTTTAAAGAATCACTGATCTGGTTTTGCGAATACTGATATTGATGATACTAACGGCCCA CDS_0289 242318 242597