##gff-version  3
# Sequence Data: seqnum=1;seqlen=62730;seqhdr="NC_007409.1 Acidianus two-tailed virus, complete genome"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="44|Thermoplasma_volcanium_GSS1|A|39.9|11|1";gc_cont=39.90;transl_table=11;uses_sd=1
NC_007409.1	Prodigal_v2.6.3	CDS	2	178	7.6	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.379;conf=85.26;score=7.64;cscore=4.42;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
NC_007409.1	Prodigal_v2.6.3	CDS	152	973	82.4	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.370;conf=100.00;score=81.75;cscore=75.13;sscore=6.62;rscore=4.93;uscore=-0.31;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	1167	1406	14.3	-	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.458;conf=97.32;score=15.62;cscore=9.09;sscore=6.53;rscore=5.40;uscore=-2.67;tscore=2.52;
NC_007409.1	Prodigal_v2.6.3	CDS	1407	1607	9.9	-	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.418;conf=90.70;score=9.91;cscore=3.28;sscore=6.63;rscore=3.90;uscore=0.62;tscore=2.11;
NC_007409.1	Prodigal_v2.6.3	CDS	1583	1732	0.6	-	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.367;conf=72.19;score=4.15;cscore=-1.11;sscore=5.25;rscore=2.90;uscore=-2.23;tscore=1.56;
NC_007409.1	Prodigal_v2.6.3	CDS	1729	2082	40.4	-	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.427;conf=99.99;score=39.72;cscore=30.10;sscore=9.62;rscore=-0.52;uscore=8.13;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	2514	3143	36.3	-	0	ID=1_7;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424;conf=99.98;score=37.15;cscore=43.73;sscore=-6.58;rscore=4.93;uscore=-4.72;tscore=-7.61;
NC_007409.1	Prodigal_v2.6.3	CDS	3185	4414	94.2	-	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.421;conf=100.00;score=94.96;cscore=93.62;sscore=1.34;rscore=-0.52;uscore=-1.59;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	4459	4707	12.0	-	0	ID=1_9;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.378;conf=94.02;score=11.98;cscore=16.61;sscore=-4.63;rscore=5.61;uscore=-2.50;tscore=-7.74;
NC_007409.1	Prodigal_v2.6.3	CDS	4797	5156	8.6	-	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.458;conf=86.02;score=7.90;cscore=3.02;sscore=4.89;rscore=-0.52;uscore=3.40;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	5409	5594	7.0	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.425;conf=83.21;score=6.96;cscore=9.74;sscore=-2.78;rscore=-0.32;uscore=-4.40;tscore=1.95;
NC_007409.1	Prodigal_v2.6.3	CDS	5591	5974	51.5	+	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.438;conf=100.00;score=53.32;cscore=44.12;sscore=9.20;rscore=-0.52;uscore=5.25;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	5980	6507	32.1	+	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.432;conf=99.95;score=33.32;cscore=28.98;sscore=4.34;rscore=-0.52;uscore=0.98;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	6517	6759	9.5	+	0	ID=1_14;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.407;conf=92.15;score=10.71;cscore=12.29;sscore=-1.58;rscore=4.73;uscore=-2.95;tscore=-4.53;
NC_007409.1	Prodigal_v2.6.3	CDS	6820	7455	45.0	+	0	ID=1_15;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.409;conf=100.00;score=45.01;cscore=49.10;sscore=-4.10;rscore=-0.52;uscore=0.77;tscore=-4.35;
NC_007409.1	Prodigal_v2.6.3	CDS	7554	7850	30.4	-	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.424;conf=99.89;score=29.75;cscore=17.67;sscore=12.08;rscore=4.93;uscore=5.15;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	8518	9240	75.5	-	0	ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.405;conf=100.00;score=75.55;cscore=64.20;sscore=11.35;rscore=4.93;uscore=3.76;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	9323	9673	36.0	-	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410;conf=99.97;score=35.96;cscore=30.19;sscore=5.78;rscore=-0.52;uscore=3.63;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	9749	10252	41.7	-	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.389;conf=100.00;score=43.50;cscore=38.07;sscore=5.43;rscore=-0.52;uscore=1.48;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	10249	10509	13.1	-	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.326;conf=94.55;score=12.42;cscore=11.68;sscore=0.73;rscore=-0.52;uscore=-0.75;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	10642	10977	29.5	+	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.348;conf=99.89;score=29.52;cscore=22.46;sscore=7.07;rscore=-0.23;uscore=4.64;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	10990	11292	30.0	+	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.333;conf=99.92;score=31.10;cscore=24.34;sscore=6.76;rscore=5.70;uscore=-2.74;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	11289	11468	17.3	+	0	ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.356;conf=99.69;score=25.14;cscore=18.48;sscore=6.67;rscore=3.49;uscore=-6.54;tscore=1.88;
NC_007409.1	Prodigal_v2.6.3	CDS	11475	12044	20.6	+	0	ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391;conf=99.34;score=21.79;cscore=19.44;sscore=2.35;rscore=-0.23;uscore=-1.28;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	12041	12223	19.5	+	0	ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.355;conf=99.79;score=26.82;cscore=16.11;sscore=10.71;rscore=7.50;uscore=-6.02;tscore=1.91;
NC_007409.1	Prodigal_v2.6.3	CDS	12382	12867	51.0	-	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.395;conf=100.00;score=52.13;cscore=38.90;sscore=13.23;rscore=10.42;uscore=-0.99;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	12880	13347	31.6	-	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.393;conf=99.92;score=30.96;cscore=28.18;sscore=2.78;rscore=-0.52;uscore=1.29;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	13485	14048	45.5	+	0	ID=1_28;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.443;conf=100.00;score=45.47;cscore=43.16;sscore=2.31;rscore=10.42;uscore=-0.50;tscore=-7.61;
NC_007409.1	Prodigal_v2.6.3	CDS	14060	15040	110.5	+	0	ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.420;conf=100.00;score=111.67;cscore=109.05;sscore=2.62;rscore=-0.52;uscore=-0.68;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	15100	16047	46.9	+	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.410;conf=100.00;score=46.94;cscore=48.24;sscore=-1.30;rscore=-0.52;uscore=-3.44;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	16106	16768	36.5	+	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.401;conf=99.98;score=36.51;cscore=37.74;sscore=-1.23;rscore=-0.23;uscore=-3.66;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	16861	17157	1.2	+	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.377;conf=56.66;score=1.17;cscore=-3.71;sscore=4.87;rscore=-0.52;uscore=3.23;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	17154	17408	21.6	+	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.373;conf=99.48;score=22.89;cscore=12.13;sscore=10.75;rscore=4.93;uscore=1.87;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	17454	17699	4.9	+	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386;conf=78.59;score=5.66;cscore=0.43;sscore=5.23;rscore=-0.53;uscore=2.40;tscore=2.58;
NC_007409.1	Prodigal_v2.6.3	CDS	17741	18154	38.4	+	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.379;conf=99.99;score=39.19;cscore=37.39;sscore=1.80;rscore=-0.52;uscore=-1.16;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	18295	19668	124.5	-	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.409;conf=100.00;score=124.48;cscore=121.67;sscore=2.81;rscore=-0.23;uscore=0.38;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	19802	20383	38.7	-	0	ID=1_37;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.392;conf=99.99;score=39.63;cscore=41.08;sscore=-1.45;rscore=-0.52;uscore=2.53;tscore=-4.35;
NC_007409.1	Prodigal_v2.6.3	CDS	20419	20847	44.2	-	0	ID=1_38;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.408;conf=100.00;score=43.55;cscore=43.90;sscore=-0.35;rscore=-0.52;uscore=-1.84;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	20979	22130	65.6	+	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.434;conf=100.00;score=65.60;cscore=62.38;sscore=3.22;rscore=-0.52;uscore=1.08;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	22197	23102	84.4	-	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.398;conf=100.00;score=84.41;cscore=79.71;sscore=4.70;rscore=-0.52;uscore=2.56;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	23208	23693	50.2	-	0	ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.379;conf=100.00;score=49.55;cscore=47.76;sscore=1.79;rscore=-0.52;uscore=0.30;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	23951	24394	43.0	-	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.367;conf=99.99;score=43.02;cscore=39.15;sscore=3.87;rscore=-0.52;uscore=1.73;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	24460	26862	220.3	-	0	ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.407;conf=99.99;score=219.64;cscore=218.51;sscore=1.13;rscore=0.54;uscore=-1.41;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	27000	28703	57.7	+	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.448;conf=100.00;score=57.72;cscore=47.77;sscore=9.95;rscore=5.70;uscore=1.59;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	28800	34622	639.4	+	0	ID=1_45;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.423;conf=99.99;score=639.41;cscore=636.35;sscore=3.06;rscore=0.54;uscore=-0.13;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	34705	35109	17.9	+	0	ID=1_46;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.398;conf=98.41;score=17.95;cscore=15.78;sscore=2.17;rscore=-0.52;uscore=0.03;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	35175	35858	56.9	+	0	ID=1_47;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.406;conf=100.00;score=56.95;cscore=52.36;sscore=4.58;rscore=-0.52;uscore=2.44;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	35892	37448	119.4	+	0	ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.409;conf=100.00;score=120.35;cscore=113.19;sscore=7.16;rscore=-0.52;uscore=4.11;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	37676	38536	58.8	-	0	ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.402;conf=100.00;score=58.78;cscore=63.23;sscore=-4.44;rscore=-0.52;uscore=-6.58;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	38542	39375	71.1	-	0	ID=1_50;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.409;conf=100.00;score=71.76;cscore=68.90;sscore=2.86;rscore=-0.52;uscore=0.05;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	39432	41393	201.7	-	0	ID=1_51;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.408;conf=99.99;score=201.70;cscore=200.74;sscore=0.96;rscore=-0.52;uscore=-1.18;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	41455	42096	36.2	-	0	ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.414;conf=99.98;score=36.20;cscore=34.83;sscore=1.37;rscore=-0.23;uscore=-1.05;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	42204	42671	36.6	-	0	ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378;conf=99.97;score=35.92;cscore=36.50;sscore=-0.58;rscore=-0.52;uscore=-2.07;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	42857	44989	137.4	-	0	ID=1_54;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.417;conf=100.00;score=138.19;cscore=135.63;sscore=2.56;rscore=-0.52;uscore=-0.37;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	45034	47712	286.5	-	0	ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453;conf=99.99;score=286.47;cscore=282.67;sscore=3.80;rscore=-0.23;uscore=1.38;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	47850	48245	35.6	-	0	ID=1_56;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.409;conf=99.97;score=34.91;cscore=38.00;sscore=-3.09;rscore=-0.52;uscore=-4.58;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	48407	49555	113.0	+	0	ID=1_57;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.421;conf=100.00;score=113.02;cscore=103.62;sscore=9.40;rscore=5.70;uscore=1.05;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	49719	50801	89.0	+	0	ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.398;conf=100.00;score=89.01;cscore=90.08;sscore=-1.07;rscore=-0.23;uscore=-3.49;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	50873	51319	17.1	-	0	ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.391;conf=98.09;score=17.14;cscore=16.08;sscore=1.06;rscore=-0.23;uscore=-1.36;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	51453	53309	209.0	-	0	ID=1_60;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.424;conf=99.99;score=208.35;cscore=204.12;sscore=4.23;rscore=-0.52;uscore=2.74;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	53415	54935	109.0	+	0	ID=1_61;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.429;conf=100.00;score=108.98;cscore=108.85;sscore=0.13;rscore=-0.52;uscore=-2.01;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	55008	56159	101.0	+	0	ID=1_62;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.433;conf=100.00;score=101.02;cscore=98.52;sscore=2.51;rscore=-0.52;uscore=0.37;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	56251	56829	39.8	+	0	ID=1_63;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.344;conf=99.99;score=39.83;cscore=36.07;sscore=3.76;rscore=-0.52;uscore=1.62;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	56849	57829	116.6	-	0	ID=1_64;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.401;conf=100.00;score=116.64;cscore=117.60;sscore=-0.96;rscore=-0.52;uscore=-3.10;tscore=2.66;
NC_007409.1	Prodigal_v2.6.3	CDS	57892	61929	208.5	-	0	ID=1_65;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456;conf=99.99;score=207.87;cscore=209.46;sscore=-1.58;rscore=4.93;uscore=1.75;tscore=-7.61;
NC_007409.1	Prodigal_v2.6.3	CDS	61995	62720	80.4	+	0	ID=1_66;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.433;conf=100.00;score=80.41;cscore=74.79;sscore=5.62;rscore=-0.52;uscore=3.48;tscore=2.66;