##gff-version  3
# Sequence Data: seqnum=1;seqlen=100000;seqhdr="gnl|Bactopia|pilon_re2_3:1553989-1653988"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="47|Xenorhabdus_nematophila_ATCC_19061|B|44.1|11|1";gc_cont=44.20;transl_table=11;uses_sd=1
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	1	546	64.9	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.458;conf=100.00;score=64.94;cscore=61.72;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	785	1813	121.3	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.467;conf=100.00;score=120.63;cscore=103.82;sscore=16.81;rscore=14.77;uscore=-1.29;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	1898	2911	68.9	+	0	ID=1_3;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.489;conf=100.00;score=68.88;cscore=81.57;sscore=-12.68;rscore=0.14;uscore=-0.35;tscore=-12.48;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	2898	3665	66.3	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.466;conf=100.00;score=67.48;cscore=67.50;sscore=-0.02;rscore=-5.31;uscore=0.12;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	3894	5093	43.8	+	0	ID=1_5;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441;conf=100.00;score=43.14;cscore=51.19;sscore=-8.05;rscore=3.02;uscore=2.06;tscore=-12.48;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	5272	5673	14.1	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.413;conf=95.62;score=13.41;cscore=19.35;sscore=-5.94;rscore=-7.00;uscore=-2.28;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	5727	6083	24.3	+	0	ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.387;conf=99.68;score=25.00;cscore=15.97;sscore=9.03;rscore=14.77;uscore=-0.44;tscore=-5.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	6247	6663	42.7	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.410;conf=99.99;score=42.66;cscore=27.75;sscore=14.91;rscore=11.01;uscore=-0.08;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	6917	7150	13.0	+	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.372;conf=94.47;score=12.35;cscore=1.42;sscore=10.93;rscore=10.17;uscore=-2.27;tscore=3.69;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	7183	7716	32.4	+	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.448;conf=99.95;score=33.36;cscore=32.29;sscore=1.07;rscore=-7.00;uscore=3.16;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	7748	8521	58.7	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.435;conf=100.00;score=59.62;cscore=41.86;sscore=17.75;rscore=11.01;uscore=1.83;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	8611	9186	46.5	-	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465;conf=100.00;score=46.54;cscore=39.68;sscore=6.86;rscore=3.02;uscore=-0.15;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	9295	9876	43.3	-	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.445;conf=100.00;score=43.28;cscore=45.92;sscore=-2.64;rscore=-7.00;uscore=0.37;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	9959	11170	76.6	-	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.485;conf=100.00;score=75.91;cscore=70.15;sscore=5.76;rscore=3.02;uscore=-0.59;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	11283	12152	81.5	+	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.455;conf=100.00;score=81.54;cscore=81.87;sscore=-0.33;rscore=-7.00;uscore=2.68;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	12219	13238	67.4	-	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468;conf=100.00;score=67.38;cscore=59.63;sscore=7.76;rscore=3.02;uscore=0.75;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	13372	14373	66.9	-	0	ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.459;conf=100.00;score=68.12;cscore=61.23;sscore=6.89;rscore=0.14;uscore=1.55;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	14363	15469	121.9	-	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.477;conf=100.00;score=121.25;cscore=114.28;sscore=6.96;rscore=3.02;uscore=0.61;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	15755	15982	20.7	-	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.434;conf=99.01;score=20.04;cscore=9.39;sscore=10.64;rscore=9.90;uscore=-2.20;tscore=3.59;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	16256	16726	62.5	+	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.433;conf=100.00;score=62.55;cscore=46.94;sscore=15.61;rscore=11.01;uscore=0.62;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	16923	17438	44.8	+	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=11-12bp;gc_cont=0.430;conf=100.00;score=44.16;cscore=42.36;sscore=1.80;rscore=-1.81;uscore=0.27;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	17425	18600	107.3	+	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.451;conf=100.00;score=108.46;cscore=110.89;sscore=-2.43;rscore=-7.00;uscore=-0.61;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	18796	19917	110.6	+	0	ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.382;conf=100.00;score=109.95;cscore=111.85;sscore=-1.90;rscore=-7.00;uscore=1.76;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	20029	20796	84.8	-	0	ID=1_24;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.438;conf=100.00;score=85.82;cscore=76.16;sscore=9.66;rscore=3.64;uscore=1.06;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	20824	21498	102.1	-	0	ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461;conf=100.00;score=102.12;cscore=83.38;sscore=18.75;rscore=11.01;uscore=3.75;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	21639	23171	155.5	-	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509;conf=100.00;score=156.55;cscore=141.66;sscore=14.89;rscore=9.79;uscore=0.03;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	23190	24191	107.2	-	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.494;conf=100.00;score=106.52;cscore=88.06;sscore=18.46;rscore=14.77;uscore=0.35;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	24302	25558	106.7	+	0	ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.468;conf=100.00;score=106.73;cscore=89.33;sscore=17.40;rscore=11.01;uscore=2.41;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	25680	26753	117.1	+	0	ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.486;conf=100.00;score=117.12;cscore=99.09;sscore=18.03;rscore=14.77;uscore=-0.73;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	26858	27829	94.0	+	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.496;conf=100.00;score=93.98;cscore=80.32;sscore=13.65;rscore=11.01;uscore=-1.34;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	27886	28800	109.6	+	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.484;conf=100.00;score=110.29;cscore=97.75;sscore=12.54;rscore=3.02;uscore=4.87;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	28875	30014	116.2	+	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.490;conf=100.00;score=116.22;cscore=95.83;sscore=20.39;rscore=14.77;uscore=1.63;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	30011	31291	101.0	+	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.461;conf=100.00;score=104.31;cscore=84.25;sscore=20.06;rscore=14.77;uscore=-2.02;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	31294	32142	72.3	+	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.483;conf=100.00;score=73.59;cscore=52.13;sscore=21.47;rscore=14.77;uscore=1.45;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	32367	33074	93.3	+	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492;conf=100.00;score=92.62;cscore=77.13;sscore=15.50;rscore=11.01;uscore=1.16;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	33162	34328	103.3	+	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473;conf=100.00;score=103.29;cscore=86.88;sscore=16.41;rscore=11.01;uscore=1.42;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	34397	35071	65.4	-	0	ID=1_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453;conf=100.00;score=66.56;cscore=61.27;sscore=5.29;rscore=3.02;uscore=-2.89;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	35081	35509	22.7	-	0	ID=1_38;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.457;conf=99.38;score=22.07;cscore=26.18;sscore=-4.11;rscore=-7.00;uscore=-0.45;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	35734	36873	127.9	+	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.487;conf=100.00;score=127.85;cscore=120.13;sscore=7.72;rscore=3.02;uscore=0.71;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	36879	39968	247.7	+	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.484;conf=99.99;score=248.90;cscore=251.34;sscore=-2.44;rscore=-7.00;uscore=-0.65;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	40184	40666	34.2	+	0	ID=1_41;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420;conf=99.96;score=33.52;cscore=29.27;sscore=4.26;rscore=11.01;uscore=-0.10;tscore=-5.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	40720	41409	66.5	+	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.468;conf=100.00;score=67.21;cscore=56.94;sscore=10.27;rscore=3.02;uscore=2.56;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	41406	42665	99.9	+	0	ID=1_43;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438;conf=100.00;score=101.21;cscore=90.80;sscore=10.41;rscore=14.77;uscore=0.34;tscore=-5.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	42740	43255	41.9	-	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.424;conf=99.99;score=41.21;cscore=25.62;sscore=15.59;rscore=9.79;uscore=2.46;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	43730	46174	176.7	+	0	ID=1_45;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.476;conf=100.00;score=176.68;cscore=176.84;sscore=-0.16;rscore=-3.65;uscore=-0.50;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	46290	50000	315.5	-	0	ID=1_46;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493;conf=99.99;score=314.89;cscore=307.87;sscore=7.02;rscore=3.02;uscore=0.67;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	50413	52209	171.9	-	0	ID=1_47;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487;conf=100.00;score=173.20;cscore=155.33;sscore=17.87;rscore=9.79;uscore=2.80;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	52206	53201	94.0	-	0	ID=1_48;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.507;conf=100.00;score=95.20;cscore=78.99;sscore=16.21;rscore=9.79;uscore=1.25;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	53211	54194	81.2	-	0	ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.516;conf=100.00;score=82.40;cscore=69.94;sscore=12.45;rscore=9.79;uscore=-2.50;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	54204	55136	79.4	-	0	ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.483;conf=100.00;score=80.53;cscore=63.78;sscore=16.74;rscore=14.77;uscore=-3.19;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	55146	56066	82.7	-	0	ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.490;conf=100.00;score=82.71;cscore=69.65;sscore=13.06;rscore=9.79;uscore=-0.72;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	56230	57840	145.7	-	0	ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473;conf=100.00;score=145.01;cscore=132.02;sscore=12.99;rscore=11.01;uscore=-1.35;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	58158	59264	121.5	-	0	ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.479;conf=100.00;score=120.83;cscore=115.74;sscore=5.09;rscore=3.02;uscore=-1.27;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	59947	60411	28.5	-	0	ID=1_54;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.452;conf=99.83;score=27.82;cscore=26.98;sscore=0.84;rscore=-7.00;uscore=4.50;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	60800	61873	145.7	+	0	ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.485;conf=100.00;score=145.71;cscore=125.91;sscore=19.80;rscore=14.77;uscore=1.03;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	61866	62996	105.3	+	0	ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.489;conf=100.00;score=106.50;cscore=88.68;sscore=17.82;rscore=14.77;uscore=-2.19;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	63006	64043	109.8	+	0	ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.487;conf=100.00;score=110.93;cscore=104.86;sscore=6.07;rscore=3.02;uscore=-2.11;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	64064	64732	56.4	+	0	ID=1_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462;conf=100.00;score=57.41;cscore=42.68;sscore=14.73;rscore=11.01;uscore=-1.32;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	64929	65591	38.5	+	0	ID=1_59;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.437;conf=99.98;score=37.86;cscore=41.18;sscore=-3.32;rscore=-7.00;uscore=0.34;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	65745	66083	22.7	+	0	ID=1_60;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.413;conf=99.47;score=22.73;cscore=12.94;sscore=9.79;rscore=3.02;uscore=2.78;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	67297	67767	15.5	+	0	ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.401;conf=96.79;score=14.82;cscore=8.00;sscore=6.82;rscore=3.02;uscore=0.46;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	67878	68600	65.6	-	0	ID=1_62;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.398;conf=100.00;score=65.63;cscore=58.40;sscore=7.23;rscore=3.02;uscore=0.22;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	68708	69052	3.3	-	0	ID=1_63;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.438;conf=64.75;score=2.64;cscore=2.08;sscore=0.57;rscore=-7.00;uscore=4.23;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	69381	69725	5.2	+	0	ID=1_64;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.426;conf=76.75;score=5.19;cscore=14.03;sscore=-8.84;rscore=-7.00;uscore=4.16;tscore=-5.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	69821	70249	28.2	+	0	ID=1_65;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469;conf=99.85;score=28.20;cscore=37.74;sscore=-9.54;rscore=3.02;uscore=-0.09;tscore=-12.48;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	70375	70740	50.0	-	0	ID=1_66;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.437;conf=100.00;score=49.99;cscore=28.58;sscore=21.40;rscore=14.77;uscore=2.64;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	70853	71962	92.5	-	0	ID=1_67;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465;conf=100.00;score=91.86;cscore=84.94;sscore=6.92;rscore=3.02;uscore=0.56;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	72323	73957	155.2	+	0	ID=1_68;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.459;conf=100.00;score=155.23;cscore=145.38;sscore=9.84;rscore=3.64;uscore=2.21;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	74057	74854	40.9	-	0	ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459;conf=99.99;score=40.29;cscore=25.80;sscore=14.49;rscore=11.01;uscore=0.15;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	75470	76183	47.6	+	0	ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.402;conf=100.00;score=47.55;cscore=37.89;sscore=9.66;rscore=3.02;uscore=2.65;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	76318	76677	13.6	-	0	ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.358;conf=95.14;score=12.94;cscore=5.80;sscore=7.14;rscore=0.14;uscore=3.67;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	77233	77502	5.4	+	0	ID=1_72;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.470;conf=77.72;score=5.44;cscore=7.68;sscore=-2.25;rscore=-7.00;uscore=0.76;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	77584	78264	66.4	-	0	ID=1_73;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.419;conf=100.00;score=67.56;cscore=57.78;sscore=9.78;rscore=3.02;uscore=1.59;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	78251	79906	110.9	-	0	ID=1_74;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.468;conf=100.00;score=110.93;cscore=105.83;sscore=5.11;rscore=-3.65;uscore=4.76;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	80019	81320	136.3	-	0	ID=1_75;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.484;conf=100.00;score=137.44;cscore=122.33;sscore=15.12;rscore=11.01;uscore=-0.99;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	81336	82919	155.1	-	0	ID=1_76;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.494;conf=100.00;score=155.92;cscore=154.06;sscore=1.86;rscore=0.14;uscore=-3.09;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	82961	83146	16.8	-	0	ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.478;conf=98.41;score=17.95;cscore=6.53;sscore=11.42;rscore=8.06;uscore=-0.71;tscore=2.92;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	83158	83409	25.8	-	0	ID=1_78;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.433;conf=99.73;score=25.77;cscore=10.61;sscore=15.16;rscore=10.96;uscore=0.23;tscore=3.97;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	83478	84824	139.3	-	0	ID=1_79;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.450;conf=100.00;score=138.65;cscore=129.50;sscore=9.15;rscore=3.02;uscore=2.79;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	85092	86144	75.3	+	0	ID=1_80;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408;conf=100.00;score=75.28;cscore=61.34;sscore=13.93;rscore=11.01;uscore=-1.06;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	86186	86482	32.9	+	0	ID=1_81;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.451;conf=99.96;score=33.69;cscore=24.98;sscore=8.71;rscore=3.02;uscore=0.88;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	86479	87354	113.6	+	0	ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.469;conf=100.00;score=114.85;cscore=98.34;sscore=16.52;rscore=11.01;uscore=0.23;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	87364	88881	154.4	+	0	ID=1_83;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.475;conf=100.00;score=155.58;cscore=145.63;sscore=9.95;rscore=3.64;uscore=1.15;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	88878	89414	37.1	+	0	ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.477;conf=99.99;score=40.14;cscore=31.84;sscore=8.30;rscore=3.02;uscore=-1.77;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	89395	90354	90.4	+	0	ID=1_85;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.483;conf=100.00;score=90.44;cscore=90.13;sscore=0.31;rscore=-5.31;uscore=1.63;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	90373	91200	81.7	+	0	ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.457;conf=100.00;score=82.80;cscore=72.50;sscore=10.30;rscore=5.11;uscore=0.12;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	91680	93191	126.6	+	0	ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.468;conf=100.00;score=125.96;cscore=131.53;sscore=-5.57;rscore=-7.00;uscore=-1.91;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	93414	93620	11.2	-	0	ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.435;conf=91.94;score=10.59;cscore=-2.60;sscore=13.19;rscore=10.31;uscore=0.78;tscore=3.25;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	93893	95413	158.1	+	0	ID=1_89;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.452;conf=100.00;score=158.10;cscore=144.53;sscore=13.58;rscore=9.79;uscore=-0.21;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	95545	96456	63.1	-	0	ID=1_90;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.450;conf=100.00;score=62.42;cscore=64.99;sscore=-2.57;rscore=3.02;uscore=1.06;tscore=-5.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	96799	96936	16.5	+	0	ID=1_91;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.420;conf=97.79;score=16.48;cscore=7.25;sscore=9.23;rscore=5.94;uscore=1.14;tscore=2.15;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	97000	98763	142.0	-	0	ID=1_92;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.455;conf=100.00;score=141.36;cscore=146.48;sscore=-5.11;rscore=-7.00;uscore=-1.45;tscore=3.99;
gnl|Bactopia|pilon_re2_3:1553989-1653988	Prodigal_v2.6.3	CDS	99011	100000	104.0	+	0	ID=1_93;partial=01;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.481;conf=100.00;score=104.05;cscore=89.06;sscore=14.99;rscore=9.79;uscore=1.21;tscore=3.99;