gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2019	2090	0.86	+	.	ID=p_0001;locus_tag=p_0001;TSS=2090;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TTTTTCGTTTCTATCCGCTTTATTCTCTTCACTCTCTCTTTGCCCTGCCTTCTTGGCAGATAATCTGACTG
gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2124	2195	0.76	+	.	ID=p_0002;locus_tag=p_0002;TSS=2195;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TATTGGCTCACTTTTTGAGACCAAAAAGCTCAGCTTTCAACACCCTGTTACAGGTATGTTAAAACTCGATT
##gff-version  3
# Sequence Data: seqnum=1;seqlen=10000;seqhdr="gnl|Bactopia|M1_115:170874-180873"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	3	158	2.5	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.410;conf=64.24;score=2.55;cscore=-0.17;sscore=2.72;rscore=0.00;uscore=0.00;tscore=3.22;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	835	1941	113.2	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.475;conf=100.00;score=112.54;cscore=106.94;sscore=5.60;rscore=2.79;uscore=-0.49;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	2259	3869	159.8	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475;conf=100.00;score=159.11;cscore=144.73;sscore=14.37;rscore=11.19;uscore=-0.11;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	4033	4953	76.0	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.486;conf=100.00;score=75.97;cscore=60.80;sscore=15.17;rscore=10.71;uscore=0.51;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	4963	5895	101.7	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.478;conf=100.00;score=102.89;cscore=85.23;sscore=17.66;rscore=14.84;uscore=-2.31;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	5905	6888	89.5	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509;conf=100.00;score=90.64;cscore=75.72;sscore=14.91;rscore=10.71;uscore=-0.92;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	6898	7893	76.1	+	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512;conf=100.00;score=77.26;cscore=58.83;sscore=18.42;rscore=10.71;uscore=2.59;tscore=3.95;
gnl|Bactopia|M1_115:170874-180873	Prodigal_v2.6.3	CDS	7890	9686	162.4	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.489;conf=100.00;score=163.68;cscore=144.14;sscore=19.54;rscore=10.71;uscore=3.59;tscore=3.95;
chrom	db	type	start	end	name	strand	score	description
CDS_0003	ProPr	promoter	78.0	149.0	prom_0001	+	0.86	ID=p_0001;locus_tag=p_0001;TSS=149.0;class=intergenic;min10seq=GCAGATAAT;min10score=2;min10class=weak;promseq=TTTTTCGTTTCTATCCGCTTTATTCTCTTCACTCTCTCTTTGCCCTGCCTTCTTGGCAGATAATCTGACTG
CDS_0003	ProPr	promoter	184.0	255.0	prom_0002	+	0.76	ID=p_0002;locus_tag=p_0002;TSS=255.0;class=intergenic;min10seq=ATGTTAAAA;min10score=3;min10class=weak;promseq=TATTGGCTCACTTTTTGAGACCAAAAAGCTCAGCTTTCAACACCCTGTTACAGGTATGTTAAAACTCGATT
gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2019	2090	0.86	+	.	ID=p_0001;locus_tag=p_0001;TSS=2090;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TTTTTCGTTTCTATCCGCTTTATTCTCTTCACTCTCTCTTTGCCCTGCCTTCTTGGCAGATAATCTGACTG
gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2124	2195	0.76	+	.	ID=p_0002;locus_tag=p_0002;TSS=2195;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TATTGGCTCACTTTTTGAGACCAAAAAGCTCAGCTTTCAACACCCTGTTACAGGTATGTTAAAACTCGATT
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	3	158	CDS_0001	+	64.24	ID=CDS_0001;locus_tag=CDS_0001;RBS=None;conf=64.24;prodigalID=1_1;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	835	1941	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_2;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	2259	3869	CDS_0003	+	100.00	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	4033	4953	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGA;conf=100.00;prodigalID=1_4;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	4963	5895	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAG;conf=100.00;prodigalID=1_5;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	5905	6888	CDS_0006	+	100.00	ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGA;conf=100.00;prodigalID=1_6;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	6898	7893	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=AGGA;conf=100.00;prodigalID=1_7;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	7890	9686	CDS_0008	+	100.00	ID=CDS_0008;locus_tag=CDS_0008;RBS=AGGA;conf=100.00;prodigalID=1_8;
gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2019	2090	0.86	+	.	ID=p_0001;locus_tag=p_0001;TSS=2090;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=TTTTTCGTTTCTATCCGCTTTATTCTCTTCACTCTCTCTTTGCCCTGCCTTCTTGGCAGATAATCTGACTG
gnl|Bactopia|M1_115:170874-180873	ProPr	promoter	2124	2195	0.76	+	.	ID=p_0002;locus_tag=p_0002;TSS=2195;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TATTGGCTCACTTTTTGAGACCAAAAAGCTCAGCTTTCAACACCCTGTTACAGGTATGTTAAAACTCGATT
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	3	158	CDS_0001	+	64.24	ID=CDS_0001;locus_tag=CDS_0001;RBS=None;conf=64.24;prodigalID=1_1;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	835	1941	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_2;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	2259	3869	CDS_0003	+	100.00	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_3;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	4033	4953	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGA;conf=100.00;prodigalID=1_4;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	4963	5895	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAG;conf=100.00;prodigalID=1_5;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	5905	6888	CDS_0006	+	100.00	ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGA;conf=100.00;prodigalID=1_6;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	6898	7893	CDS_0007	+	100.00	ID=CDS_0007;locus_tag=CDS_0007;RBS=AGGA;conf=100.00;prodigalID=1_7;
gnl|Bactopia|M1_115:170874-180873	ProPr	gene	7890	9686	CDS_0008	+	100.00	ID=CDS_0008;locus_tag=CDS_0008;RBS=AGGA;conf=100.00;prodigalID=1_8;
gnl|Bactopia|pilon_re2_3	prokka	gene	1554773	1555801	.	+	.	ID=pilon_re2_03624_gene;Name=astE;gene=astE;locus_tag=pilon_re2_03624
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1554773	1555801	.	+	0	ID=pilon_re2_03624;Parent=pilon_re2_03624_gene;eC_number=3.5.1.96;Name=astE;db_xref=COG:COG2988;gene=astE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q87Q40;locus_tag=pilon_re2_03624;product=Succinylglutamate desuccinylase;protein_id=gnl|Bactopia|pilon_re2_03624
gnl|Bactopia|pilon_re2_3	prokka	gene	1555886	1556899	.	+	.	ID=pilon_re2_03625_gene;Name=btuC;gene=btuC;locus_tag=pilon_re2_03625
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1555886	1556899	.	+	0	ID=pilon_re2_03625;Parent=pilon_re2_03625_gene;Name=btuC;db_xref=COG:COG4139;gene=btuC;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P06609;locus_tag=pilon_re2_03625;product=Vitamin B12 import system permease protein BtuC;protein_id=gnl|Bactopia|pilon_re2_03625
gnl|Bactopia|pilon_re2_3	prokka	gene	1556886	1557653	.	+	.	ID=pilon_re2_03626_gene;Name=btuD_4;gene=btuD_4;locus_tag=pilon_re2_03626
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1556886	1557653	.	+	0	ID=pilon_re2_03626;Parent=pilon_re2_03626_gene;eC_number=7.6.2.8;Name=btuD_4;db_xref=COG:COG4138;gene=btuD_4;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P06611;locus_tag=pilon_re2_03626;product=Vitamin B12 import ATP-binding protein BtuD;protein_id=gnl|Bactopia|pilon_re2_03626
gnl|Bactopia|pilon_re2_3	prokka	gene	1557882	1559081	.	+	.	ID=pilon_re2_03627_gene;locus_tag=pilon_re2_03627
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1557882	1559081	.	+	0	ID=pilon_re2_03627;Parent=pilon_re2_03627_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03627;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03627
gnl|Bactopia|pilon_re2_3	prokka	gene	1559260	1559661	.	+	.	ID=pilon_re2_03628_gene;locus_tag=pilon_re2_03628
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1559260	1559661	.	+	0	ID=pilon_re2_03628;Parent=pilon_re2_03628_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03628;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03628
gnl|Bactopia|pilon_re2_3	prokka	gene	1559715	1560071	.	+	.	ID=pilon_re2_03629_gene;locus_tag=pilon_re2_03629
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1559715	1560071	.	+	0	ID=pilon_re2_03629;Parent=pilon_re2_03629_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03629;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03629
gnl|Bactopia|pilon_re2_3	prokka	gene	1560235	1560651	.	+	.	ID=pilon_re2_03630_gene;locus_tag=pilon_re2_03630
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1560235	1560651	.	+	0	ID=pilon_re2_03630;Parent=pilon_re2_03630_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03630;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03630
gnl|Bactopia|pilon_re2_3	prokka	gene	1560905	1561138	.	+	.	ID=pilon_re2_03631_gene;locus_tag=pilon_re2_03631
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1560905	1561138	.	+	0	ID=pilon_re2_03631;Parent=pilon_re2_03631_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03631;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03631
gnl|Bactopia|pilon_re2_3	prokka	gene	1561198	1561704	.	+	.	ID=pilon_re2_03632_gene;locus_tag=pilon_re2_03632
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1561198	1561704	.	+	0	ID=pilon_re2_03632;Parent=pilon_re2_03632_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03632;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03632
gnl|Bactopia|pilon_re2_3	prokka	gene	1561736	1562509	.	+	.	ID=pilon_re2_03633_gene;locus_tag=pilon_re2_03633
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1561736	1562509	.	+	0	ID=pilon_re2_03633;Parent=pilon_re2_03633_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03633;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03633
gnl|Bactopia|pilon_re2_3	prokka	gene	1562599	1563174	.	-	.	ID=pilon_re2_03634_gene;locus_tag=pilon_re2_03634
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1562599	1563174	.	-	0	ID=pilon_re2_03634;Parent=pilon_re2_03634_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03634;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03634
gnl|Bactopia|pilon_re2_3	prokka	gene	1563283	1563864	.	-	.	ID=pilon_re2_03635_gene;locus_tag=pilon_re2_03635
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1563283	1563864	.	-	0	ID=pilon_re2_03635;Parent=pilon_re2_03635_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03635;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03635
gnl|Bactopia|pilon_re2_3	prokka	gene	1563947	1565158	.	-	.	ID=pilon_re2_03636_gene;Name=ynfM;gene=ynfM;locus_tag=pilon_re2_03636
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1563947	1565158	.	-	0	ID=pilon_re2_03636;Parent=pilon_re2_03636_gene;Name=ynfM;gene=ynfM;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P43531;locus_tag=pilon_re2_03636;product=Inner membrane transport protein YnfM;protein_id=gnl|Bactopia|pilon_re2_03636
gnl|Bactopia|pilon_re2_3	prokka	gene	1565271	1566140	.	+	.	ID=pilon_re2_03637_gene;Name=cynR_2;gene=cynR_2;locus_tag=pilon_re2_03637
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1565271	1566140	.	+	0	ID=pilon_re2_03637;Parent=pilon_re2_03637_gene;Name=cynR_2;gene=cynR_2;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P27111;locus_tag=pilon_re2_03637;product=HTH-type transcriptional regulator CynR;protein_id=gnl|Bactopia|pilon_re2_03637
gnl|Bactopia|pilon_re2_3	prokka	gene	1566207	1567226	.	-	.	ID=pilon_re2_03638_gene;locus_tag=pilon_re2_03638
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1566207	1567226	.	-	0	ID=pilon_re2_03638;Parent=pilon_re2_03638_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03638;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03638
gnl|Bactopia|pilon_re2_3	prokka	gene	1567360	1568361	.	-	.	ID=pilon_re2_03639_gene;locus_tag=pilon_re2_03639
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1567360	1568361	.	-	0	ID=pilon_re2_03639;Parent=pilon_re2_03639_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03639;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03639
gnl|Bactopia|pilon_re2_3	prokka	gene	1568351	1569457	.	-	.	ID=pilon_re2_03640_gene;Name=mdtN_2;gene=mdtN_2;locus_tag=pilon_re2_03640
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1568351	1569457	.	-	0	ID=pilon_re2_03640;Parent=pilon_re2_03640_gene;Name=mdtN_2;db_xref=COG:COG1566;gene=mdtN_2;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P32716;locus_tag=pilon_re2_03640;product=Multidrug resistance protein MdtN;protein_id=gnl|Bactopia|pilon_re2_03640
gnl|Bactopia|pilon_re2_3	prokka	gene	1569743	1569970	.	-	.	ID=pilon_re2_03641_gene;locus_tag=pilon_re2_03641
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1569743	1569970	.	-	0	ID=pilon_re2_03641;Parent=pilon_re2_03641_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03641;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03641
gnl|Bactopia|pilon_re2_3	prokka	gene	1570244	1570714	.	+	.	ID=pilon_re2_03642_gene;locus_tag=pilon_re2_03642
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1570244	1570714	.	+	0	ID=pilon_re2_03642;Parent=pilon_re2_03642_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03642;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03642
gnl|Bactopia|pilon_re2_3	prokka	gene	1570911	1571426	.	+	.	ID=pilon_re2_03643_gene;Name=ygjP;gene=ygjP;locus_tag=pilon_re2_03643
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1570911	1571426	.	+	0	ID=pilon_re2_03643;Parent=pilon_re2_03643_gene;eC_number=3.6.1.-;Name=ygjP;db_xref=COG:COG1451;gene=ygjP;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P42597;locus_tag=pilon_re2_03643;product=UTP pyrophosphatase;protein_id=gnl|Bactopia|pilon_re2_03643
gnl|Bactopia|pilon_re2_3	prokka	gene	1571413	1572588	.	+	.	ID=pilon_re2_03644_gene;Name=rlmF;gene=rlmF;locus_tag=pilon_re2_03644
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1571413	1572588	.	+	0	ID=pilon_re2_03644;Parent=pilon_re2_03644_gene;eC_number=2.1.1.181;Name=rlmF;db_xref=COG:COG3129;gene=rlmF;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P75782;locus_tag=pilon_re2_03644;product=Ribosomal RNA large subunit methyltransferase F;protein_id=gnl|Bactopia|pilon_re2_03644
gnl|Bactopia|pilon_re2_3	prokka	gene	1572784	1573905	.	+	.	ID=pilon_re2_03645_gene;locus_tag=pilon_re2_03645
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1572784	1573905	.	+	0	ID=pilon_re2_03645;Parent=pilon_re2_03645_gene;inference=ab initio prediction:Prodigal:002006,protein motif:HAMAP:MF_00556;locus_tag=pilon_re2_03645;product=Bacteriohemerythrin;protein_id=gnl|Bactopia|pilon_re2_03645
gnl|Bactopia|pilon_re2_3	prokka	gene	1574017	1574784	.	-	.	ID=pilon_re2_03646_gene;locus_tag=pilon_re2_03646
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1574017	1574784	.	-	0	ID=pilon_re2_03646;Parent=pilon_re2_03646_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03646;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03646
gnl|Bactopia|pilon_re2_3	prokka	gene	1574812	1575486	.	-	.	ID=pilon_re2_03647_gene;Name=rspR;gene=rspR;locus_tag=pilon_re2_03647
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1574812	1575486	.	-	0	ID=pilon_re2_03647;Parent=pilon_re2_03647_gene;Name=rspR;db_xref=COG:COG1802;gene=rspR;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P0ACM2;locus_tag=pilon_re2_03647;product=HTH-type transcriptional repressor RspR;protein_id=gnl|Bactopia|pilon_re2_03647
gnl|Bactopia|pilon_re2_3	prokka	gene	1575627	1577159	.	-	.	ID=pilon_re2_03648_gene;Name=aldH;gene=aldH;locus_tag=pilon_re2_03648
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1575627	1577159	.	-	0	ID=pilon_re2_03648;Parent=pilon_re2_03648_gene;eC_number=1.2.1.4;Name=aldH;gene=aldH;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q56694;locus_tag=pilon_re2_03648;product=NADP-dependent fatty aldehyde dehydrogenase;protein_id=gnl|Bactopia|pilon_re2_03648
gnl|Bactopia|pilon_re2_3	prokka	gene	1577178	1578179	.	-	.	ID=pilon_re2_03649_gene;locus_tag=pilon_re2_03649
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1577178	1578179	.	-	0	ID=pilon_re2_03649;Parent=pilon_re2_03649_gene;db_xref=COG:COG3938;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q87Q20;locus_tag=pilon_re2_03649;product=putative protein;protein_id=gnl|Bactopia|pilon_re2_03649
gnl|Bactopia|pilon_re2_3	prokka	gene	1578290	1579546	.	+	.	ID=pilon_re2_03650_gene;Name=dadA;gene=dadA;locus_tag=pilon_re2_03650
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1578290	1579546	.	+	0	ID=pilon_re2_03650;Parent=pilon_re2_03650_gene;eC_number=1.4.99.-;Name=dadA;gene=dadA;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:O30745;locus_tag=pilon_re2_03650;product=D-amino acid dehydrogenase;protein_id=gnl|Bactopia|pilon_re2_03650
gnl|Bactopia|pilon_re2_3	prokka	gene	1579668	1580741	.	+	.	ID=pilon_re2_03651_gene;locus_tag=pilon_re2_03651
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1579668	1580741	.	+	0	ID=pilon_re2_03651;Parent=pilon_re2_03651_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03651;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03651
gnl|Bactopia|pilon_re2_3	prokka	gene	1580846	1581817	.	+	.	ID=pilon_re2_03652_gene;Name=lhpI;gene=lhpI;locus_tag=pilon_re2_03652
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1580846	1581817	.	+	0	ID=pilon_re2_03652;Parent=pilon_re2_03652_gene;eC_number=1.5.1.49;Name=lhpI;db_xref=COG:COG2423;gene=lhpI;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q485R8;locus_tag=pilon_re2_03652;product=Delta(1)-pyrroline-2-carboxylate reductase;protein_id=gnl|Bactopia|pilon_re2_03652
gnl|Bactopia|pilon_re2_3	prokka	gene	1581874	1582788	.	+	.	ID=pilon_re2_03653_gene;Name=dapAL;gene=dapAL;locus_tag=pilon_re2_03653
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1581874	1582788	.	+	0	ID=pilon_re2_03653;Parent=pilon_re2_03653_gene;eC_number=4.-.-.-;Name=dapAL;gene=dapAL;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:O69782;locus_tag=pilon_re2_03653;product=putative DapA-like lyase;protein_id=gnl|Bactopia|pilon_re2_03653
gnl|Bactopia|pilon_re2_3	prokka	gene	1582863	1584002	.	+	.	ID=pilon_re2_03654_gene;Name=potA_1;gene=potA_1;locus_tag=pilon_re2_03654
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1582863	1584002	.	+	0	ID=pilon_re2_03654;Parent=pilon_re2_03654_gene;eC_number=7.6.2.11;Name=potA_1;db_xref=COG:COG3842;gene=potA_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P69874;locus_tag=pilon_re2_03654;product=Spermidine/putrescine import ATP-binding protein PotA;protein_id=gnl|Bactopia|pilon_re2_03654
gnl|Bactopia|pilon_re2_3	prokka	gene	1583999	1585279	.	+	.	ID=pilon_re2_03655_gene;locus_tag=pilon_re2_03655
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1583999	1585279	.	+	0	ID=pilon_re2_03655;Parent=pilon_re2_03655_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03655;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03655
gnl|Bactopia|pilon_re2_3	prokka	gene	1585282	1586130	.	+	.	ID=pilon_re2_03656_gene;Name=ydcV_1;gene=ydcV_1;locus_tag=pilon_re2_03656
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1585282	1586130	.	+	0	ID=pilon_re2_03656;Parent=pilon_re2_03656_gene;Name=ydcV_1;gene=ydcV_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P0AFR9;locus_tag=pilon_re2_03656;product=Inner membrane ABC transporter permease protein YdcV;protein_id=gnl|Bactopia|pilon_re2_03656
gnl|Bactopia|pilon_re2_3	prokka	gene	1586355	1587062	.	+	.	ID=pilon_re2_03657_gene;Name=deoD3;gene=deoD3;locus_tag=pilon_re2_03657
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1586355	1587062	.	+	0	ID=pilon_re2_03657;Parent=pilon_re2_03657_gene;eC_number=2.4.2.1;Name=deoD3;db_xref=COG:COG0813;gene=deoD3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q8EDM4;locus_tag=pilon_re2_03657;product=Purine nucleoside phosphorylase DeoD-type;protein_id=gnl|Bactopia|pilon_re2_03657
gnl|Bactopia|pilon_re2_3	prokka	gene	1587150	1588316	.	+	.	ID=pilon_re2_03658_gene;Name=tsgA;gene=tsgA;locus_tag=pilon_re2_03658
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1587150	1588316	.	+	0	ID=pilon_re2_03658;Parent=pilon_re2_03658_gene;Name=tsgA;db_xref=COG:COG0477;gene=tsgA;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P60778;locus_tag=pilon_re2_03658;product=Protein TsgA;protein_id=gnl|Bactopia|pilon_re2_03658
gnl|Bactopia|pilon_re2_3	prokka	gene	1588385	1589059	.	-	.	ID=pilon_re2_03659_gene;locus_tag=pilon_re2_03659
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1588385	1589059	.	-	0	ID=pilon_re2_03659;Parent=pilon_re2_03659_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03659;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03659
gnl|Bactopia|pilon_re2_3	prokka	gene	1589069	1589497	.	-	.	ID=pilon_re2_03660_gene;locus_tag=pilon_re2_03660
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1589069	1589497	.	-	0	ID=pilon_re2_03660;Parent=pilon_re2_03660_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03660;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03660
gnl|Bactopia|pilon_re2_3	prokka	gene	1589722	1590861	.	+	.	ID=pilon_re2_03661_gene;Name=acrE_1;gene=acrE_1;locus_tag=pilon_re2_03661
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1589722	1590861	.	+	0	ID=pilon_re2_03661;Parent=pilon_re2_03661_gene;Name=acrE_1;gene=acrE_1;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P24180;locus_tag=pilon_re2_03661;product=Multidrug export protein AcrE;protein_id=gnl|Bactopia|pilon_re2_03661
gnl|Bactopia|pilon_re2_3	prokka	gene	1590867	1593956	.	+	.	ID=pilon_re2_03662_gene;Name=mexB;gene=mexB;locus_tag=pilon_re2_03662
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1590867	1593956	.	+	0	ID=pilon_re2_03662;Parent=pilon_re2_03662_gene;Name=mexB;db_xref=COG:COG0841;gene=mexB;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P52002;locus_tag=pilon_re2_03662;product=Multidrug resistance protein MexB;protein_id=gnl|Bactopia|pilon_re2_03662
gnl|Bactopia|pilon_re2_3	prokka	gene	1594172	1594654	.	+	.	ID=pilon_re2_03663_gene;locus_tag=pilon_re2_03663
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1594172	1594654	.	+	0	ID=pilon_re2_03663;Parent=pilon_re2_03663_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03663;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03663
gnl|Bactopia|pilon_re2_3	prokka	gene	1594708	1595397	.	+	.	ID=pilon_re2_03664_gene;Name=mprA_3;gene=mprA_3;locus_tag=pilon_re2_03664
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1594708	1595397	.	+	0	ID=pilon_re2_03664;Parent=pilon_re2_03664_gene;Name=mprA_3;db_xref=COG:COG0745;gene=mprA_3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:A0R3I8;locus_tag=pilon_re2_03664;product=Response regulator MprA;protein_id=gnl|Bactopia|pilon_re2_03664
gnl|Bactopia|pilon_re2_3	prokka	gene	1595394	1596653	.	+	.	ID=pilon_re2_03665_gene;Name=sasA_7;gene=sasA_7;locus_tag=pilon_re2_03665
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1595394	1596653	.	+	0	ID=pilon_re2_03665;Parent=pilon_re2_03665_gene;eC_number=2.7.-.-;Name=sasA_7;gene=sasA_7;inference=ab initio prediction:Prodigal:002006,protein motif:HAMAP:MF_01837;locus_tag=pilon_re2_03665;product=Adaptive-response sensory-kinase SasA;protein_id=gnl|Bactopia|pilon_re2_03665
gnl|Bactopia|pilon_re2_3	prokka	gene	1596728	1597243	.	-	.	ID=pilon_re2_03666_gene;locus_tag=pilon_re2_03666
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1596728	1597243	.	-	0	ID=pilon_re2_03666;Parent=pilon_re2_03666_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03666;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03666
gnl|Bactopia|pilon_re2_3	prokka	gene	1597718	1600162	.	+	.	ID=pilon_re2_03667_gene;locus_tag=pilon_re2_03667
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1597718	1600162	.	+	0	ID=pilon_re2_03667;Parent=pilon_re2_03667_gene;eC_number=3.4.24.3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P43154;locus_tag=pilon_re2_03667;product=Microbial collagenase;protein_id=gnl|Bactopia|pilon_re2_03667
gnl|Bactopia|pilon_re2_3	prokka	gene	1600278	1603988	.	-	.	ID=pilon_re2_03668_gene;locus_tag=pilon_re2_03668
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1600278	1603988	.	-	0	ID=pilon_re2_03668;Parent=pilon_re2_03668_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03668;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03668
gnl|Bactopia|pilon_re2_3	prokka	gene	1604401	1606197	.	-	.	ID=pilon_re2_03669_gene;locus_tag=pilon_re2_03669
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1604401	1606197	.	-	0	ID=pilon_re2_03669;Parent=pilon_re2_03669_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03669;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03669
gnl|Bactopia|pilon_re2_3	prokka	gene	1606194	1607189	.	-	.	ID=pilon_re2_03670_gene;Name=oppF_4;gene=oppF_4;locus_tag=pilon_re2_03670
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1606194	1607189	.	-	0	ID=pilon_re2_03670;Parent=pilon_re2_03670_gene;Name=oppF_4;db_xref=COG:COG4608;gene=oppF_4;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P24137;locus_tag=pilon_re2_03670;product=Oligopeptide transport ATP-binding protein OppF;protein_id=gnl|Bactopia|pilon_re2_03670
gnl|Bactopia|pilon_re2_3	prokka	gene	1607199	1608182	.	-	.	ID=pilon_re2_03671_gene;Name=oppD_4;gene=oppD_4;locus_tag=pilon_re2_03671
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1607199	1608182	.	-	0	ID=pilon_re2_03671;Parent=pilon_re2_03671_gene;Name=oppD_4;db_xref=COG:COG0444;gene=oppD_4;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P76027;locus_tag=pilon_re2_03671;product=Oligopeptide transport ATP-binding protein OppD;protein_id=gnl|Bactopia|pilon_re2_03671
gnl|Bactopia|pilon_re2_3	prokka	gene	1608192	1609124	.	-	.	ID=pilon_re2_03672_gene;Name=oppC_2;gene=oppC_2;locus_tag=pilon_re2_03672
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1608192	1609124	.	-	0	ID=pilon_re2_03672;Parent=pilon_re2_03672_gene;Name=oppC_2;db_xref=COG:COG1173;gene=oppC_2;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P08006;locus_tag=pilon_re2_03672;product=Oligopeptide transport system permease protein OppC;protein_id=gnl|Bactopia|pilon_re2_03672
gnl|Bactopia|pilon_re2_3	prokka	gene	1609134	1610054	.	-	.	ID=pilon_re2_03673_gene;Name=oppB_3;gene=oppB_3;locus_tag=pilon_re2_03673
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1609134	1610054	.	-	0	ID=pilon_re2_03673;Parent=pilon_re2_03673_gene;Name=oppB_3;db_xref=COG:COG0601;gene=oppB_3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P08005;locus_tag=pilon_re2_03673;product=Oligopeptide transport system permease protein OppB;protein_id=gnl|Bactopia|pilon_re2_03673
gnl|Bactopia|pilon_re2_3	prokka	gene	1610218	1611828	.	-	.	ID=pilon_re2_03674_gene;Name=oppA_3;gene=oppA_3;locus_tag=pilon_re2_03674
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1610218	1611828	.	-	0	ID=pilon_re2_03674;Parent=pilon_re2_03674_gene;Name=oppA_3;db_xref=COG:COG4166;gene=oppA_3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P23843;locus_tag=pilon_re2_03674;product=Periplasmic oligopeptide-binding protein;protein_id=gnl|Bactopia|pilon_re2_03674
gnl|Bactopia|pilon_re2_3	prokka	gene	1612146	1613252	.	-	.	ID=pilon_re2_03675_gene;Name=pepT_2;gene=pepT_2;locus_tag=pilon_re2_03675
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1612146	1613252	.	-	0	ID=pilon_re2_03675;Parent=pilon_re2_03675_gene;eC_number=3.4.11.4;Name=pepT_2;db_xref=COG:COG2195;gene=pepT_2;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:Q81WU4;locus_tag=pilon_re2_03675;product=Peptidase T;protein_id=gnl|Bactopia|pilon_re2_03675
gnl|Bactopia|pilon_re2_3	prokka	gene	1613935	1614399	.	-	.	ID=pilon_re2_03676_gene;locus_tag=pilon_re2_03676
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1613935	1614399	.	-	0	ID=pilon_re2_03676;Parent=pilon_re2_03676_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03676;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03676
gnl|Bactopia|pilon_re2_3	prokka	gene	1614788	1615861	.	+	.	ID=pilon_re2_03677_gene;Name=hpd;gene=hpd;locus_tag=pilon_re2_03677
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1614788	1615861	.	+	0	ID=pilon_re2_03677;Parent=pilon_re2_03677_gene;eC_number=1.13.11.27;Name=hpd;gene=hpd;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P80064;locus_tag=pilon_re2_03677;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=gnl|Bactopia|pilon_re2_03677
gnl|Bactopia|pilon_re2_3	prokka	gene	1615854	1616984	.	+	.	ID=pilon_re2_03678_gene;Name=hmgA;gene=hmgA;locus_tag=pilon_re2_03678
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1615854	1616984	.	+	0	ID=pilon_re2_03678;Parent=pilon_re2_03678_gene;eC_number=1.13.11.5;Name=hmgA;gene=hmgA;inference=ab initio prediction:Prodigal:002006,protein motif:HAMAP:MF_00334;locus_tag=pilon_re2_03678;product=Homogentisate 1%2C2-dioxygenase;protein_id=gnl|Bactopia|pilon_re2_03678
gnl|Bactopia|pilon_re2_3	prokka	gene	1616994	1618031	.	+	.	ID=pilon_re2_03679_gene;locus_tag=pilon_re2_03679
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1616994	1618031	.	+	0	ID=pilon_re2_03679;Parent=pilon_re2_03679_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03679;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03679
gnl|Bactopia|pilon_re2_3	prokka	gene	1618052	1618720	.	+	.	ID=pilon_re2_03680_gene;Name=nagL;gene=nagL;locus_tag=pilon_re2_03680
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1618052	1618720	.	+	0	ID=pilon_re2_03680;Parent=pilon_re2_03680_gene;eC_number=5.2.1.4;Name=nagL;gene=nagL;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:O86043;locus_tag=pilon_re2_03680;product=Maleylpyruvate isomerase;protein_id=gnl|Bactopia|pilon_re2_03680
gnl|Bactopia|pilon_re2_3	prokka	gene	1618917	1619579	.	+	.	ID=pilon_re2_03681_gene;locus_tag=pilon_re2_03681
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1618917	1619579	.	+	0	ID=pilon_re2_03681;Parent=pilon_re2_03681_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03681;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03681
gnl|Bactopia|pilon_re2_3	prokka	gene	1619733	1620071	.	+	.	ID=pilon_re2_03682_gene;locus_tag=pilon_re2_03682
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1619733	1620071	.	+	0	ID=pilon_re2_03682;Parent=pilon_re2_03682_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03682;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03682
gnl|Bactopia|pilon_re2_3	prokka	gene	1620251	1620327	.	+	.	ID=pilon_re2_03683_gene;locus_tag=pilon_re2_03683
gnl|Bactopia|pilon_re2_3	Aragorn:001002	tRNA	1620251	1620327	.	+	.	ID=pilon_re2_03683;Parent=pilon_re2_03683_gene;inference=COORDINATES:profile:Aragorn:001002;locus_tag=pilon_re2_03683;product=tRNA-Val(gac)
gnl|Bactopia|pilon_re2_3	prokka	gene	1620374	1620450	.	+	.	ID=pilon_re2_03684_gene;locus_tag=pilon_re2_03684
gnl|Bactopia|pilon_re2_3	Aragorn:001002	tRNA	1620374	1620450	.	+	.	ID=pilon_re2_03684;Parent=pilon_re2_03684_gene;inference=COORDINATES:profile:Aragorn:001002;locus_tag=pilon_re2_03684;product=tRNA-Val(gac)
gnl|Bactopia|pilon_re2_3	prokka	gene	1621285	1621755	.	+	.	ID=pilon_re2_03685_gene;locus_tag=pilon_re2_03685
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1621285	1621755	.	+	0	ID=pilon_re2_03685;Parent=pilon_re2_03685_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03685;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03685
gnl|Bactopia|pilon_re2_3	prokka	gene	1621866	1622588	.	-	.	ID=pilon_re2_03686_gene;locus_tag=pilon_re2_03686
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1621866	1622588	.	-	0	ID=pilon_re2_03686;Parent=pilon_re2_03686_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03686;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03686
gnl|Bactopia|pilon_re2_3	prokka	gene	1622696	1623046	.	-	.	ID=pilon_re2_03687_gene;locus_tag=pilon_re2_03687
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1622696	1623046	.	-	0	ID=pilon_re2_03687;Parent=pilon_re2_03687_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03687;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03687
gnl|Bactopia|pilon_re2_3	prokka	gene	1623369	1623713	.	+	.	ID=pilon_re2_03688_gene;locus_tag=pilon_re2_03688
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1623369	1623713	.	+	0	ID=pilon_re2_03688;Parent=pilon_re2_03688_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03688;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03688
gnl|Bactopia|pilon_re2_3	prokka	gene	1623809	1624237	.	+	.	ID=pilon_re2_03689_gene;locus_tag=pilon_re2_03689
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1623809	1624237	.	+	0	ID=pilon_re2_03689;Parent=pilon_re2_03689_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03689;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03689
gnl|Bactopia|pilon_re2_3	prokka	gene	1624363	1624728	.	-	.	ID=pilon_re2_03690_gene;locus_tag=pilon_re2_03690
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1624363	1624728	.	-	0	ID=pilon_re2_03690;Parent=pilon_re2_03690_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03690;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03690
gnl|Bactopia|pilon_re2_3	prokka	gene	1624841	1625950	.	-	.	ID=pilon_re2_03691_gene;locus_tag=pilon_re2_03691
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1624841	1625950	.	-	0	ID=pilon_re2_03691;Parent=pilon_re2_03691_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03691;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03691
gnl|Bactopia|pilon_re2_3	prokka	gene	1626311	1627945	.	+	.	ID=pilon_re2_03692_gene;Name=oppA_4;gene=oppA_4;locus_tag=pilon_re2_03692
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1626311	1627945	.	+	0	ID=pilon_re2_03692;Parent=pilon_re2_03692_gene;Name=oppA_4;db_xref=COG:COG4166;gene=oppA_4;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P06202;locus_tag=pilon_re2_03692;product=Periplasmic oligopeptide-binding protein;protein_id=gnl|Bactopia|pilon_re2_03692
gnl|Bactopia|pilon_re2_3	prokka	gene	1628045	1628842	.	-	.	ID=pilon_re2_03693_gene;locus_tag=pilon_re2_03693
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1628045	1628842	.	-	0	ID=pilon_re2_03693;Parent=pilon_re2_03693_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03693;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03693
gnl|Bactopia|pilon_re2_3	prokka	gene	1629458	1630171	.	+	.	ID=pilon_re2_03694_gene;locus_tag=pilon_re2_03694
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1629458	1630171	.	+	0	ID=pilon_re2_03694;Parent=pilon_re2_03694_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03694;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03694
gnl|Bactopia|pilon_re2_3	prokka	gene	1630306	1630665	.	-	.	ID=pilon_re2_03695_gene;locus_tag=pilon_re2_03695
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1630306	1630665	.	-	0	ID=pilon_re2_03695;Parent=pilon_re2_03695_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03695;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03695
gnl|Bactopia|pilon_re2_3	prokka	gene	1631221	1631490	.	+	.	ID=pilon_re2_03696_gene;locus_tag=pilon_re2_03696
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1631221	1631490	.	+	0	ID=pilon_re2_03696;Parent=pilon_re2_03696_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03696;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03696
gnl|Bactopia|pilon_re2_3	prokka	gene	1631572	1632252	.	-	.	ID=pilon_re2_03697_gene;Name=dpiA;gene=dpiA;locus_tag=pilon_re2_03697
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1631572	1632252	.	-	0	ID=pilon_re2_03697;Parent=pilon_re2_03697_gene;Name=dpiA;db_xref=COG:COG4565;gene=dpiA;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P0AEF4;locus_tag=pilon_re2_03697;product=Transcriptional regulatory protein DpiA;protein_id=gnl|Bactopia|pilon_re2_03697
gnl|Bactopia|pilon_re2_3	prokka	gene	1632239	1633894	.	-	.	ID=pilon_re2_03698_gene;Name=citA;gene=citA;locus_tag=pilon_re2_03698
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1632239	1633894	.	-	0	ID=pilon_re2_03698;Parent=pilon_re2_03698_gene;eC_number=2.7.13.3;Name=citA;db_xref=COG:COG3290;gene=citA;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P52687;locus_tag=pilon_re2_03698;product=Sensor histidine kinase CitA;protein_id=gnl|Bactopia|pilon_re2_03698
gnl|Bactopia|pilon_re2_3	prokka	gene	1634007	1635308	.	-	.	ID=pilon_re2_03699_gene;Name=oadB;gene=oadB;locus_tag=pilon_re2_03699
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1634007	1635308	.	-	0	ID=pilon_re2_03699;Parent=pilon_re2_03699_gene;eC_number=7.2.4.2;Name=oadB;db_xref=COG:COG1883;gene=oadB;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P13156;locus_tag=pilon_re2_03699;product=Oxaloacetate decarboxylase beta chain;protein_id=gnl|Bactopia|pilon_re2_03699
gnl|Bactopia|pilon_re2_3	prokka	gene	1635324	1636907	.	-	.	ID=pilon_re2_03700_gene;Name=oadA_2;gene=oadA_2;locus_tag=pilon_re2_03700
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1635324	1636907	.	-	0	ID=pilon_re2_03700;Parent=pilon_re2_03700_gene;eC_number=7.2.4.2;Name=oadA_2;db_xref=COG:COG0511;gene=oadA_2;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P13187;locus_tag=pilon_re2_03700;product=Oxaloacetate decarboxylase alpha chain;protein_id=gnl|Bactopia|pilon_re2_03700
gnl|Bactopia|pilon_re2_3	prokka	gene	1636949	1637134	.	-	.	ID=pilon_re2_03701_gene;Name=oadA_3;gene=oadA_3;locus_tag=pilon_re2_03701
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1636949	1637134	.	-	0	ID=pilon_re2_03701;Parent=pilon_re2_03701_gene;eC_number=7.2.4.2;Name=oadA_3;db_xref=COG:COG0511;gene=oadA_3;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P13187;locus_tag=pilon_re2_03701;product=Oxaloacetate decarboxylase alpha chain;protein_id=gnl|Bactopia|pilon_re2_03701
gnl|Bactopia|pilon_re2_3	prokka	gene	1637146	1637397	.	-	.	ID=pilon_re2_03702_gene;Name=oadG_2;gene=oadG_2;locus_tag=pilon_re2_03702
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1637146	1637397	.	-	0	ID=pilon_re2_03702;Parent=pilon_re2_03702_gene;eC_number=7.2.4.2;Name=oadG_2;gene=oadG_2;inference=ab initio prediction:Prodigal:002006,protein motif:HAMAP:MF_00404;locus_tag=pilon_re2_03702;product=oxaloacetate decarboxylase gamma chain;protein_id=gnl|Bactopia|pilon_re2_03702
gnl|Bactopia|pilon_re2_3	prokka	gene	1637466	1638812	.	-	.	ID=pilon_re2_03703_gene;Name=citS;gene=citS;locus_tag=pilon_re2_03703
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1637466	1638812	.	-	0	ID=pilon_re2_03703;Parent=pilon_re2_03703_gene;Name=citS;db_xref=COG:COG3493;gene=citS;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P31602;locus_tag=pilon_re2_03703;product=Citrate-sodium symporter;protein_id=gnl|Bactopia|pilon_re2_03703
gnl|Bactopia|pilon_re2_3	prokka	gene	1639080	1640132	.	+	.	ID=pilon_re2_03704_gene;Name=citC;gene=citC;locus_tag=pilon_re2_03704
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1639080	1640132	.	+	0	ID=pilon_re2_03704;Parent=pilon_re2_03704_gene;eC_number=6.2.1.22;Name=citC;db_xref=COG:COG3053;gene=citC;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P77390;locus_tag=pilon_re2_03704;product=[Citrate [pro-3S]-lyase] ligase;protein_id=gnl|Bactopia|pilon_re2_03704
gnl|Bactopia|pilon_re2_3	prokka	gene	1640174	1640470	.	+	.	ID=pilon_re2_03705_gene;Name=citD;gene=citD;locus_tag=pilon_re2_03705
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1640174	1640470	.	+	0	ID=pilon_re2_03705;Parent=pilon_re2_03705_gene;Name=citD;db_xref=COG:COG3052;gene=citD;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P69330;locus_tag=pilon_re2_03705;product=Citrate lyase acyl carrier protein;protein_id=gnl|Bactopia|pilon_re2_03705
gnl|Bactopia|pilon_re2_3	prokka	gene	1640467	1641342	.	+	.	ID=pilon_re2_03706_gene;Name=citE;gene=citE;locus_tag=pilon_re2_03706
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1640467	1641342	.	+	0	ID=pilon_re2_03706;Parent=pilon_re2_03706_gene;eC_number=4.1.3.6;Name=citE;db_xref=COG:COG2301;gene=citE;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P0A9I1;locus_tag=pilon_re2_03706;product=Citrate lyase subunit beta;protein_id=gnl|Bactopia|pilon_re2_03706
gnl|Bactopia|pilon_re2_3	prokka	gene	1641352	1642869	.	+	.	ID=pilon_re2_03707_gene;Name=citF;gene=citF;locus_tag=pilon_re2_03707
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1641352	1642869	.	+	0	ID=pilon_re2_03707;Parent=pilon_re2_03707_gene;eC_number=4.1.3.6;Name=citF;db_xref=COG:COG3051;gene=citF;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P45413;locus_tag=pilon_re2_03707;product=Citrate lyase alpha chain;protein_id=gnl|Bactopia|pilon_re2_03707
gnl|Bactopia|pilon_re2_3	prokka	gene	1642866	1643402	.	+	.	ID=pilon_re2_03708_gene;Name=citX;gene=citX;locus_tag=pilon_re2_03708
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1642866	1643402	.	+	0	ID=pilon_re2_03708;Parent=pilon_re2_03708_gene;eC_number=2.7.7.61;Name=citX;db_xref=COG:COG3697;gene=citX;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P0A6G5;locus_tag=pilon_re2_03708;product=Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase;protein_id=gnl|Bactopia|pilon_re2_03708
gnl|Bactopia|pilon_re2_3	prokka	gene	1643383	1644342	.	+	.	ID=pilon_re2_03709_gene;Name=citG;gene=citG;locus_tag=pilon_re2_03709
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1643383	1644342	.	+	0	ID=pilon_re2_03709;Parent=pilon_re2_03709_gene;eC_number=2.4.2.52;Name=citG;db_xref=COG:COG1767;gene=citG;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P77231;locus_tag=pilon_re2_03709;product=2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase;protein_id=gnl|Bactopia|pilon_re2_03709
gnl|Bactopia|pilon_re2_3	prokka	gene	1644361	1645188	.	+	.	ID=pilon_re2_03710_gene;locus_tag=pilon_re2_03710
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1644361	1645188	.	+	0	ID=pilon_re2_03710;Parent=pilon_re2_03710_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03710;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03710
gnl|Bactopia|pilon_re2_3	prokka	gene	1645668	1647179	.	+	.	ID=pilon_re2_03711_gene;Name=gbpA_3;gene=gbpA_3;locus_tag=pilon_re2_03711
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1645668	1647179	.	+	0	ID=pilon_re2_03711;Parent=pilon_re2_03711_gene;Name=gbpA_3;gene=gbpA_3;inference=ab initio prediction:Prodigal:002006,protein motif:HAMAP:MF_01905;locus_tag=pilon_re2_03711;product=GlcNAc-binding protein A;protein_id=gnl|Bactopia|pilon_re2_03711
gnl|Bactopia|pilon_re2_3	prokka	gene	1647402	1647608	.	-	.	ID=pilon_re2_03712_gene;locus_tag=pilon_re2_03712
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1647402	1647608	.	-	0	ID=pilon_re2_03712;Parent=pilon_re2_03712_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03712;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03712
gnl|Bactopia|pilon_re2_3	prokka	gene	1647881	1649401	.	+	.	ID=pilon_re2_03713_gene;locus_tag=pilon_re2_03713
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1647881	1649401	.	+	0	ID=pilon_re2_03713;Parent=pilon_re2_03713_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03713;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03713
gnl|Bactopia|pilon_re2_3	prokka	gene	1649533	1650444	.	-	.	ID=pilon_re2_03714_gene;locus_tag=pilon_re2_03714
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1649533	1650444	.	-	0	ID=pilon_re2_03714;Parent=pilon_re2_03714_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03714;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03714
gnl|Bactopia|pilon_re2_3	prokka	gene	1650787	1650924	.	+	.	ID=pilon_re2_03715_gene;locus_tag=pilon_re2_03715
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1650787	1650924	.	+	0	ID=pilon_re2_03715;Parent=pilon_re2_03715_gene;inference=ab initio prediction:Prodigal:002006;locus_tag=pilon_re2_03715;product=hypothetical protein;protein_id=gnl|Bactopia|pilon_re2_03715
gnl|Bactopia|pilon_re2_3	prokka	gene	1650988	1652751	.	-	.	ID=pilon_re2_03716_gene;Name=acoR;gene=acoR;locus_tag=pilon_re2_03716
gnl|Bactopia|pilon_re2_3	Prodigal:002006	CDS	1650988	1652751	.	-	0	ID=pilon_re2_03716;Parent=pilon_re2_03716_gene;Name=acoR;db_xref=COG:COG3284;gene=acoR;inference=ab initio prediction:Prodigal:002006,similar to AA sequence:UniProtKB:P28614;locus_tag=pilon_re2_03716;product=Acetoin catabolism regulatory protein;protein_id=gnl|Bactopia|pilon_re2_03716