chrom	Lstart	Lend	Lstem	Rstart	Rend	Rstem	loop	match%	Indels	score	AT	GC	ATpairs	GCpairs	GTpairs	Center	Lseq	Rseq	intergenic	tailL	tailR	polyTL	polyTR	strand	TTseq	FACoPscore	locus_tag	type	start	end	strand_y	stream	seq	aug_seq	3primeUTR	3primeUTRlen	ID
JABMMU010000012.1_2764_7066__2764_3648	962	974	13	981	993	13	6	92	0	21	19	80	16	83	0	977	GGAGACCCTCGCC	GGCGGGGGTCTCC	True	AGGCACTCG	TTTTTATGG	False	True	+	GGAGACCCTCGCC CATCTA GGCGGGGGTCTCC TTTTTATGG	90	JABMMU010000012.1_2764_7066__2764_3648_HeR	intergenic	885	1025	+	down	TCGCGCATGCGTTTGCGCTTTGCGATCGGACCTCTCTCCAGGTTGGAGGGGGGTCCGATCCTTTTACGAGGCACTCGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCCA	GACCGGAGTGTTCATGCCCGCCTGATCGCGCATGCGTTTGCGCTTTGCGATCGGACCTCTCTCCAGGTTGGAGGGGGGTCCGATCCTTTTACGAGGCACTCGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCCATGAGTAACGATCGGGTTCCTGGTGA	TCGCGCATGCGTTTGCGCTTTGCGATCGGACCTCTCTCCAGGTTGGAGGGGGGTCCGATCCTTTTACGAGGCACTCGGAGACCCTCGCCCATCTAGGCGGGGGTCTCC	108	TTerm_0001
JADKDT010000006.1_122337_133006__126620_127426	9147	9159	13	9164	9175	12	4	92	7	14	0	100	0	100	0	9161	CGGCGCGCCCGCC	GGCGGCGCGCCG	True	ATGCTAGCC	CTCCTTTTC	False	True	+	CGGCGCGCCCGCC TCGC GGCGGCGCGCCG CTCCTTTTC	76	JADKDT010000006.1_122337_133006__126620_127426_R4	intergenic	9121	9186	+	down	GTGAGCGCATGATCGGTATGCTAGCCGGCGCGCCCGCCTCGCGGCGGCGCGCCGCTCCTTTTCCG	CGACGATCTCGACAAGAATGAGTAAGTGAGCGCATGATCGGTATGCTAGCCGGCGCGCCCGCCTCGCGGCGGCGCGCCGCTCCTTTTCCGTGCCAATTCTGATCGCGCTGAATGT	GTGAGCGCATGATCGGTATGCTAGCCGGCGCGCCCGCCTCGCGGCGGCGCGCCG	54	TTerm_0002
JAEMTB010000008.1_2389_14476__8168_9052	6741	6753	13	6760	6772	13	6	92	0	21	19	80	16	83	0	6756	GGAGACCCTCGCC	GGCGGGGGTCTCC	True	AGGTACCTG	TTTTTATGG	False	True	+	GGAGACCCTCGCC CATCTA GGCGGGGGTCTCC TTTTTATGG	90	JAEMTB010000008.1_2389_14476__8168_9052_HeR	intergenic	6664	6804	+	down	TCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCCA	GACCGGAGTGTTCATGCCCGCCTGATCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCCATGAGTAACGACCGGGTTCCTGGTGA	TCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTCC	108	TTerm_0003
JAGOBF010000006.1_15951_27115__23486_24292	10201	10215	15	10225	10239	15	9	80	0	15	56	43	58	41	0	10219	AAAACCGGGTTTTCC	GGAAATCCGGTTTTT	True	AGAAAAGCA	TGGGTCTTG	True	True	+	AAAACCGGGTTTTCC TCACCATCG GGAAATCCGGTTTTT TGGGTCTTG	46	JAGOBF010000006.1_15951_27115__23486_24292_R3	intergenic	10194	10281	+	down	AAAAGCAAAACCGGGTTTTCCTCACCATCGGGAAATCCGGTTTTTTGGGTCTTGACATATTCCCATATAGGAATATAATATAACTAA	CTCCACCCGAGACCCTCAGCGTTAGAAAAGCAAAACCGGGTTTTCCTCACCATCGGGAAATCCGGTTTTTTGGGTCTTGACATATTCCCATATAGGAATATAATATAACTAATGGCGCGAACGCCCACGACCTCAGA	AAAAGCAAAACCGGGTTTTCCTCACCATCGGGAAATCCGGTTTTT	45	TTerm_0004
JAGRCF010000005.1_31921_45918__39419_40204	8353	8365	13	8372	8384	13	6	84	0	16	15	84	9	90	0	8368	CGCTCCCCAACGC	GCGCTGGGGGGCG	True	GCCTACCCC	CTGCGTTTT	False	True	+	CGCTCCCCAACGC CCCACC GCGCTGGGGGGCG CTGCGTTTT	72	JAGRCF010000005.1_31921_45918__39419_40204_HeR	intergenic	8284	8519	+	down	CACGACGCGCTGCGCCTCCGCCGTGCTGAGGACCAAGCGCAGAGCCGGTTGCCCACGAGCGCCTACCCCGCTCCCCAACGCCCCACCGCGCTGGGGGGCGCTGCGTTTTGCCGCGCTCAAGCAATGCCCCTCACCGCGGCGCGGCGTTGTAGCGCGGGGGATCTGCGCTGCATTCGGCAGCGCAAGGTCAACGGGGATGACGCGGAAATAGCGGGGGCGGACTATTGCCTTTGAT	GACCGGCACGCTGGCTCCCATCTAGCACGACGCGCTGCGCCTCCGCCGTGCTGAGGACCAAGCGCAGAGCCGGTTGCCCACGAGCGCCTACCCCGCTCCCCAACGCCCCACCGCGCTGGGGGGCGCTGCGTTTTGCCGCGCTCAAGCAATGCCCCTCACCGCGGCGCGGCGTTGTAGCGCGGGGGATCTGCGCTGCATTCGGCAGCGCAAGGTCAACGGGGATGACGCGGAAATAGCGGGGGCGGACTATTGCCTTTGATCAACATAGACCTTCTCTCATCCGTT	CACGACGCGCTGCGCCTCCGCCGTGCTGAGGACCAAGCGCAGAGCCGGTTGCCCACGAGCGCCTACCCCGCTCCCCAACGCCCCACCGCGCTGGGGGGCG	100	TTerm_0005
JAGRCF010000005.1_31921_45918__39419_40204	8353	8365	13	8372	8384	13	6	84	0	16	15	84	9	90	0	8368	CGCTCCCCAACGC	GCGCTGGGGGGCG	True	GCCTACCCC	CTGCGTTTT	False	True	+	CGCTCCCCAACGC CCCACC GCGCTGGGGGGCG CTGCGTTTT	72	JAGRCF010000005.1_31921_45918__39419_40204_R1	intergenic	8284	8519	-	down	ATCAAAGGCAATAGTCCGCCCCCGCTATTTCCGCGTCATCCCCGTTGACCTTGCGCTGCCGAATGCAGCGCAGATCCCCCGCGCTACAACGCCGCGCCGCGGTGAGGGGCATTGCTTGAGCGCGGCAAAACGCAGCGCCCCCCAGCGCGGTGGGGCGTTGGGGAGCGGGGTAGGCGCTCGTGGGCAACCGGCTCTGCGCTTGGTCCTCAGCACGGCGGAGGCGCAGCGCGTCGTG	AACGGATGAGAGAAGGTCTATGTTGATCAAAGGCAATAGTCCGCCCCCGCTATTTCCGCGTCATCCCCGTTGACCTTGCGCTGCCGAATGCAGCGCAGATCCCCCGCGCTACAACGCCGCGCCGCGGTGAGGGGCATTGCTTGAGCGCGGCAAAACGCAGCGCCCCCCAGCGCGGTGGGGCGTTGGGGAGCGGGGTAGGCGCTCGTGGGCAACCGGCTCTGCGCTTGGTCCTCAGCACGGCGGAGGCGCAGCGCGTCGTGCTAGATGGGAGCCAGCGTGCCGGTC	CACGACGCGCTGCGCCTCCGCCGTGCTGAGGACCAAGCGCAGAGCCGGTTGCCCACGAGCGCCTACCCCGCTCCCCAACGCCCCACCGCGCTGGGGGGCG	100	TTerm_0006
JAGRCF010000005.1_31921_45918__39419_40204	10577	10587	11	10593	10603	11	5	100	0	22	45	54	45	54	0	10589	AAAAGGGCGAC	GTCGCCCTTTT	True	GCAAAAACA	ACGGTTATG	True	True	+	AAAAGGGCGAC AGCTA GTCGCCCTTTT ACGGTTATG	84	JAGRCF010000005.1_31921_45918__39419_40204_R2	intergenic	10498	10623	-	down	ACCGTGCCGTGCATAACCGTAAAAGGGCGACTAGCTGTCGCCCTTTTGTTTTTGCGCTCGTGACGGCAAAACGCGCTGATGGTATACTCGCCCCAACATTCTGTGCCTATCCAGAGGAATAAGCT	AAACCAATGACGACCCCGAGGCGTAACCGTGCCGTGCATAACCGTAAAAGGGCGACTAGCTGTCGCCCTTTTGTTTTTGCGCTCGTGACGGCAAAACGCGCTGATGGTATACTCGCCCCAACATTCTGTGCCTATCCAGAGGAATAAGCTATGGCCGCCTTTCCCCTCACCCGCA	AGCTTATTCCTCTGGATAGGCACAGAATGTTGGGGCGAGTATACCATCAGCGCGTTTTGCCGTCACGAGCGCAAAAACAAAAGGGCGACAGCTAGTCGCCCTTTT	105	TTerm_0007
JACIXB010000014.1_173829_185986__177671_178459	4702	4712	11	4718	4728	11	5	100	0	22	27	72	27	72	0	4714	TCCGGCATCCC	GGGATGCCGGA	True	AAAATAGAT	AATCGGTCT	True	False	-	TCCGGCATCCC TGTGC GGGATGCCGGA ATCTATTTT	76	JACIXB010000014.1_173829_185986__177671_178459_HeR	intergenic	4631	4738	+	down	TGCGAGGGGTTCCAGGCGGGAGGAGTGGCGGGGCGGCGTATGGCTGAGCCGGTCTGGAATTCAAAATAGATCCGGCATCCCGCACAGGGATGCCGGAAATCGGTCTT	CGGGGGCACCCTCCGCGGCGGATGATGCGAGGGGTTCCAGGCGGGAGGAGTGGCGGGGCGGCGTATGGCTGAGCCGGTCTGGAATTCAAAATAGATCCGGCATCCCGCACAGGGATGCCGGAAATCGGTCTTTAAGGATCGCCTGTGTCAACCCCTC	AAGACCGATTTCCGGCATCCCTGTGCGGGATGCCGG	36	TTerm_0008
JACIXB010000014.1_173829_185986__177671_178459	4702	4712	11	4718	4728	11	5	100	0	22	27	72	27	72	0	4714	TCCGGCATCCC	GGGATGCCGGA	True	AAAATAGAT	AATCGGTCT	True	False	-	TCCGGCATCCC TGTGC GGGATGCCGGA ATCTATTTT	76	JACIXB010000014.1_173829_185986__177671_178459_R1	intergenic	4631	4738	-	down	AAGACCGATTTCCGGCATCCCTGTGCGGGATGCCGGATCTATTTTGAATTCCAGACCGGCTCAGCCATACGCCGCCCCGCCACTCCTCCCGCCTGGAACCCCTCGCA	GAGGGGTTGACACAGGCGATCCTTAAAGACCGATTTCCGGCATCCCTGTGCGGGATGCCGGATCTATTTTGAATTCCAGACCGGCTCAGCCATACGCCGCCCCGCCACTCCTCCCGCCTGGAACCCCTCGCATCATCCGCCGCGGAGGGTGCCCCCG	AAGACCGATTTCCGGCATCCCTGTGCGGGATGCCGG	36	TTerm_0009
JACPCL010000036.1_4364_12786__8860_9636	2527	2538	12	2543	2554	12	4	91	0	19	45	54	45	54	0	2540	AGATTGGAGGCG	CGCCTCTAATCT	True	GCCAAAACA	CCCCTCTAG	True	False	-	AGATTAGAGGCG GAGA CGCCTCCAATCT TGTTTTGGC	78	JACPCL010000036.1_4364_12786__8860_9636_F3	intergenic	2247	2595	-	down	ACCTTAAGAGACGCCCACCCGGCGTCATGGCCCTAGAGGGGAGATTAGAGGCGGAGACGCCTCCAATCTGTTTTGGCAGGGGTAGGTGGCTAGACTGGAAGCTATCTGTTGGTTGTCGCTATATCAAGAACAACCCGCCCCAAACCATATCTGTGTGGACGAGTGTCAGGGGGCCTCAGGAGTCCTGAGTAGTAGTCTGACTATTGGGGTCCTTGCTGGCCGTCAGTTGTGTCGCCGCCAGTGGCGGTATCGGTGGGGTGGCCACGTCTGTGAGTGCTAGCCTAAAAGCCACCCACCTGAGCAGATCCTCCGGTAGGCTGGACGCAATCCAGCGACTGGAGGGAAGGA	AGAAGGCCCTCGCCACTACTTATTGACCTTAAGAGACGCCCACCCGGCGTCATGGCCCTAGAGGGGAGATTAGAGGCGGAGACGCCTCCAATCTGTTTTGGCAGGGGTAGGTGGCTAGACTGGAAGCTATCTGTTGGTTGTCGCTATATCAAGAACAACCCGCCCCAAACCATATCTGTGTGGACGAGTGTCAGGGGGCCTCAGGAGTCCTGAGTAGTAGTCTGACTATTGGGGTCCTTGCTGGCCGTCAGTTGTGTCGCCGCCAGTGGCGGTATCGGTGGGGTGGCCACGTCTGTGAGTGCTAGCCTAAAAGCCACCCACCTGAGCAGATCCTCCGGTAGGCTGGACGCAATCCAGCGACTGGAGGGAAGGAGTGCTCAAGGTGGACCAACGGGAAC	ACCTTAAGAGACGCCCACCCGGCGTCATGGCCCTAGAGGGGAGATTAGAGGCGGAGACGCCTCCAATC	68	TTerm_0010
JAEMSP010000007.1_2490_14290__7914_8798	5317	5329	13	5336	5348	13	6	92	0	21	19	80	16	83	0	5332	GGAGACCCCCGCC	GGCGAGGGTCTCC	True	CATAAAAAG	AGGTACCTC	True	False	-	GGAGACCCTCGCC CATCTA GGCGGGGGTCTCC CTTTTTATG	82	JAEMSP010000007.1_2490_14290__7914_8798_HeR	intergenic	5285	5425	-	down	ATCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCC	GGACCGGAGTGTTCATGCCCGCCTGATCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTCCTTTTTATGGCGGCGGGGCGTACTATGCAGCCATGAGTAACGACCGGGTTCCTGGTG	ATCGCGCATACGTTTGCGCTTTGCGGTCGGACCTCTCTCCAGGCTGGAGGGGGGTCTGATCCTTTTACGAGGTACCTGGAGACCCTCGCCCATCTAGGCGGGGGTCTC	108	TTerm_0011
JAFGBX010000202.1_1_14126__6683_7489	6643	6654	12	6664	6675	12	9	83	0	14	83	16	90	10	0	6658	AACAAAAAAAAT	ATTTTTCGTGTT	True	TACACAGCA	TAAATGGCT	True	False	-	AACACGAAAAAT CCATTATCC ATTTTTTTTGTT TGCTGTGTA	28	JAFGBX010000202.1_1_14126__6683_7489_HeR	intergenic	6511	6683	-	down	GCCATTTAAACACGAAAAATCCATTATCCATTTTTTTTGTTGCTGTGTATTCCATCGAAGTGAACATCAGGTAGAGTCTCTCTTAAATAATCCAACACGAGGGCTTTCTCCTTTCATTGACAAGATCTTCCAGATAGATGCGAACTTCGGGCTCGTCGCCGGGGTGATCGAA	TTGGAGGCGTGTTCCAGCCTTCTTAGCCATTTAAACACGAAAAATCCATTATCCATTTTTTTTGTTGCTGTGTATTCCATCGAAGTGAACATCAGGTAGAGTCTCTCTTAAATAATCCAACACGAGGGCTTTCTCCTTTCATTGACAAGATCTTCCAGATAGATGCGAACTTCGGGCTCGTCGCCGGGGTGATCGAAATGCTCGTGTTCTCGCGGGAGCACG	GCCATTTAAACACGAAAAATCCATTATCCATTTTTTTTGT	40	TTerm_0012
JAFGKK010000003.1_323_8415__3155_4030	2317	2323	7	2329	2335	7	5	100	0	14	14	85	14	85	0	2325	CGTCGCC	GGCGACG	True	CTGAAAATC	GTCGCCACC	True	False	-	CGTCGCC AGCGC GGCGACG GATTTTCAG	68	JAFGKK010000003.1_323_8415__3155_4030_F2	intergenic	2275	2833	+	down	GGCGGAGGGAAAACTATGGACATCCTGCAGATTCTGAAAATCGTCGCCGCGCTGGCGACGGTCGCCACCGGCCTGATCTCCCTGGTCAAGCCGCGTGCGATCAAAGGCTTTACCGGGCTCGAGGCGACCGGCCCGCGCGGGATCACCGAAATCCGAGCCGTGTTGGGCGGCTTGTTTATCGGCTTGGGGCTCGCGCCGTTCATCCTCGCCGTGCCGCAGGTCTACCAGATGCTGGGAATTGCATACCTGGCGATCGGAGCGGTCCGCGCCGTCTCGATGGTCCTCGACCGCTCGGTGGTGCAATCCAACGTCATCAGCCTGGCGGTGGAGATCGTCTTCGGCGTCATCCTGGTGCTCTGACCGTACCGCCCTTGCTCCTTTCCTATCACCCGCGCTCCCCGATCGCCGCCCCCCGCTCCTTCGGGCCGTCGGCGGAAGCCGGTTGCGGGTTGCGCCGGGGCGGGTTTTCCTATATTCTCGGTTGGTGATTCGGGATCGAGCAGACAAACGGAGGGGCCTCCCCGGAGCGGGGAGCGTCCAAAAAAAAGGAGGAAATCA		TGATTTCCTCCTTTTTTTTGGACGCTCCCCGCTCCGGGGAGGCCCCTCCGTTTGTCTGCTCGATCCCGAATCACCAACCGAGAATATAGGAAAACCCGCCCCGGCGCAACCCGCAACCGGCTTCCGCCGACGGCCCGAAGGAGCGGGGGGCGGCGATCGGGGAGCGCGGGTGATAGGAAAGGAGCAAGGGCGGTACGGTCAGAGCACCAGGATGACGCCGAAGACGATCTCCACCGCCAGGCTGATGACGTTGGATTGCACCACCGAGCGGTCGAGGACCATCGAGACGGCGCGGACCGCTCCGATCGCCAGGTATGCAATTCCCAGCATCTGGTAGACCTGCGGCACGGCGAGGATGAACGGCGCGAGCCCCAAGCCGATAAACAAGCCGCCCAACACGGCTCGGATTTCGGTGATCCCGCGCGGGCCGGTCGCCTCGAGCCCGGTAAAGCCTTTGATCGCACGCGGCTTGACCAGGGAGATCAGGCCGGTGGCGACCGTCGCCAGCGCGGCGAC	516	TTerm_0013
JAGOBF010000006.1_15951_27115__23486_24292	10201	10215	15	10225	10239	15	9	80	0	15	56	43	58	41	0	10219	AAAACCGGGTTTTCC	GGAAATCCGGTTTTT	True	AGAAAAGCA	TGGGTCTTG	True	True	-	AAAAACCGGATTTCC CGATGGTGA GGAAAACCCGGTTTT TGCTTTTCT	46	JAGOBF010000006.1_15951_27115__23486_24292_R3	intergenic	10194	10281	+	down	AAAAGCAAAACCGGGTTTTCCTCACCATCGGGAAATCCGGTTTTTTGGGTCTTGACATATTCCCATATAGGAATATAATATAACTAA	CTCCACCCGAGACCCTCAGCGTTAGAAAAGCAAAACCGGGTTTTCCTCACCATCGGGAAATCCGGTTTTTTGGGTCTTGACATATTCCCATATAGGAATATAATATAACTAATGGCGCGAACGCCCACGACCTCAGA	TTAGTTATATTATATTCCTATATGGGAATATGTCAAGACCCAAAAAACCGGATTTCCCGATGGTGAGGAAAACCCGGTTT	80	TTerm_0014
JAGRCF010000005.1_31921_45918__39419_40204	10577	10587	11	10593	10603	11	5	100	0	22	45	54	45	54	0	10589	AAAAGGGCGAC	GTCGCCCTTTT	True	GCAAAAACA	ACGGTTATG	True	True	-	AAAAGGGCGAC TAGCT GTCGCCCTTTT TGTTTTTGC	84	JAGRCF010000005.1_31921_45918__39419_40204_R2	intergenic	10498	10623	-	down	ACCGTGCCGTGCATAACCGTAAAAGGGCGACTAGCTGTCGCCCTTTTGTTTTTGCGCTCGTGACGGCAAAACGCGCTGATGGTATACTCGCCCCAACATTCTGTGCCTATCCAGAGGAATAAGCT	AAACCAATGACGACCCCGAGGCGTAACCGTGCCGTGCATAACCGTAAAAGGGCGACTAGCTGTCGCCCTTTTGTTTTTGCGCTCGTGACGGCAAAACGCGCTGATGGTATACTCGCCCCAACATTCTGTGCCTATCCAGAGGAATAAGCTATGGCCGCCTTTCCCCTCACCCGCA	ACCGTGCCGTGCATAACCGTAAAAGGGCGACTAGCTGTCGCCCTTT	46	TTerm_0015