chrom_intergenic ID locus__tag TSS adjTSS_intergenic min10seq min10score score prediction class strand_intergenic promoterSeq start_intergenic end_intergenic chrom locus_tag_intergenic type startIntergenic endIntergenic strand stream seq aug_seq locus_tag RGSD01000015.1_1_13590__5003_5740_F2 p_0007 p_0007 3547 155 TTGTTTTTT 2 0.86 poor intergenic + GACAAAGGTTTCGGCGATTCGAATCGTTCACCAACTTGTCGATCGACGGTTGTTTTTTGGCATTCCTGGCG 84 155 RGSD01000015.1_1_13590__5003_5740 RGSD01000015.1_1_13590__5003_5740_F2 intergenic 3403 3702 - up CGTTGTGAAAACTATTGACTCGGTTCGTTTGGTCGTAGTTGTGCCGGTTAACGATGCGCGTACGTTTGGAGAACAATCGATTTCGACAAAGGTTTCGGCGATTCGAATCGTTCACCAACTTGTCGATCGACGGTTGTTTTTTGGCATTCCTGGCGAAACCTGCGGTTGTTACCTTCCGTCCGTGACGTACGAGGTGAACTCCGTGCCGGTCGCTTCACCCATCATTCCCCGCCACTTCTTCTTTTTGTGGACGGGATCATCCTTTCCCCGCCTCGTCGATCACGTCCATCGAGGTCAGA GACTTCTCGGCTCGACTCATGGTCACGTTGTGAAAACTATTGACTCGGTTCGTTTGGTCGTAGTTGTGCCGGTTAACGATGCGCGTACGTTTGGAGAACAATCGATTTCGACAAAGGTTTCGGCGATTCGAATCGTTCACCAACTTGTCGATCGACGGTTGTTTTTTGGCATTCCTGGCGAAACCTGCGGTTGTTACCTTCCGTCCGTGACGTACGAGGTGAACTCCGTGCCGGTCGCTTCACCCATCATTCCCCGCCACTTCTTCTTTTTGTGGACGGGATCATCCTTTCCCCGCCTCGTCGATCACGTCCATCGAGGTCAGAGTGGACCGTTCGGCCGACATCCTCG p_0007 RGSD01000015.1_1_13590__5003_5740_F1 p_0006 p_0006 3620 217 CCAGGAATG 1 0.89 poor intergenic + CCAGGAATGCCAAAAAACAACCGTCGATCGACAAGTTGGTGAACGATTCGAATCGCCGAAACCTTTGTCGA 146 217 RGSD01000015.1_1_13590__5003_5740 RGSD01000015.1_1_13590__5003_5740_F1 intergenic 3403 3702 + up TCTGACCTCGATGGACGTGATCGACGAGGCGGGGAAAGGATGATCCCGTCCACAAAAAGAAGAAGTGGCGGGGAATGATGGGTGAAGCGACCGGCACGGAGTTCACCTCGTACGTCACGGACGGAAGGTAACAACCGCAGGTTTCGCCAGGAATGCCAAAAAACAACCGTCGATCGACAAGTTGGTGAACGATTCGAATCGCCGAAACCTTTGTCGAAATCGATTGTTCTCCAAACGTACGCGCATCGTTAACCGGCACAACTACGACCAAACGAACCGAGTCAATAGTTTTCACAACG CGAGGATGTCGGCCGAACGGTCCACTCTGACCTCGATGGACGTGATCGACGAGGCGGGGAAAGGATGATCCCGTCCACAAAAAGAAGAAGTGGCGGGGAATGATGGGTGAAGCGACCGGCACGGAGTTCACCTCGTACGTCACGGACGGAAGGTAACAACCGCAGGTTTCGCCAGGAATGCCAAAAAACAACCGTCGATCGACAAGTTGGTGAACGATTCGAATCGCCGAAACCTTTGTCGAAATCGATTGTTCTCCAAACGTACGCGCATCGTTAACCGGCACAACTACGACCAAACGAACCGAGTCAATAGTTTTCACAACGTGACCATGAGTCGAGCCGAGAAGTC p_0006 RGRJ01000028.1_6375_14007__10971_11762_F1 p_0005 p_0005 4497 100 TGATTGAAT 2 0.39 poor intergenic + GTACCGCAGCCGGTACATCGAGCTGAAAAATTCACACGACCACGCCGTCATTCAGTGATTGAATGACGAAG 31 102 RGRJ01000028.1_6375_14007__10971_11762 RGRJ01000028.1_6375_14007__10971_11762_F1 intergenic 4444 4597 - up GGCCGTTGGCAGCAGCGACGGACCGGCGGGTACCGCAGCCGGTACATCGAGCTGAAAAATTCACACGACCACGCCGTCATTCAGTGATTGAATGACGAAGTGAGCACTGCACCAGACTGCGTTCGGGTAGATATCCCCGCCGCGACGATCAAT CGGGAACCCTCGTACCTCCGGCCTAGGCCGTTGGCAGCAGCGACGGACCGGCGGGTACCGCAGCCGGTACATCGAGCTGAAAAATTCACACGACCACGCCGTCATTCAGTGATTGAATGACGAAGTGAGCACTGCACCAGACTGCGTTCGGGTAGATATCCCCGCCGCGACGATCAATATGTCCATCGCTCGGACGGTGGCCG p_0005 SHYU01000025.1_14851_22560__19193_19945_HeR p_0010 p_0010 5166 440 AACTTTTAT 3 0.87 poor intergenic + TGAACTATACGTCAGCGTGACAGAATTTGATAACCATATTGACGAGGAAGTGACAAACTTTTATCCTTTCC 374 445 SHYU01000025.1_14851_22560__19193_19945 SHYU01000025.1_14851_22560__19193_19945_HeR intergenic 5095 5606 - up GACATCGGGCAGCGCACCAAGCCGCGGTGATCATCGACGGATCTCTCGCGCGTTGTCGTTAAGTCCGCGTCGTCATCACCAAGTCACGAACATGCGAATGAGCGTTCATCGCTCACAAACGAAATGAATGCGACAGGCGTCTGAGAGTAAAGAGAACCCTTTGATGGGGTCACCGCCATTGCCGAGCTGGGCCTGAAGTCGTTCCATGAACGACGCGATCCCCGTCGACCCTGCCGCCACAGCCTCTGATTCCGACAATCTCCAGTCCATCGCCGTATCTTCCCCGCTACTCACAGCCATGGCAGTTGGGGGAGCCCCCTAGCCGAGATGGAATGCCGCTGTACTTCGTTATACCCGCATCGGTACCATTGAACTATACGTCAGCGTGACAGAATTTGATAACCATATTGACGAGGAAGTGACAAACTTTTATCCTTTCCCTCACAGAGATACGGGACGCAGGCCGCCATTCCCGTATTGGAGGGTCCGGATGCATGTTGAGGAGACTGAC TGGCGCGGCTGGCAGAGGCGGAATAGACATCGGGCAGCGCACCAAGCCGCGGTGATCATCGACGGATCTCTCGCGCGTTGTCGTTAAGTCCGCGTCGTCATCACCAAGTCACGAACATGCGAATGAGCGTTCATCGCTCACAAACGAAATGAATGCGACAGGCGTCTGAGAGTAAAGAGAACCCTTTGATGGGGTCACCGCCATTGCCGAGCTGGGCCTGAAGTCGTTCCATGAACGACGCGATCCCCGTCGACCCTGCCGCCACAGCCTCTGATTCCGACAATCTCCAGTCCATCGCCGTATCTTCCCCGCTACTCACAGCCATGGCAGTTGGGGGAGCCCCCTAGCCGAGATGGAATGCCGCTGTACTTCGTTATACCCGCATCGGTACCATTGAACTATACGTCAGCGTGACAGAATTTGATAACCATATTGACGAGGAAGTGACAAACTTTTATCCTTTCCCTCACAGAGATACGGGACGCAGGCCGCCATTCCCGTATTGGAGGGTCCGGATGCATGTTGAGGAGACTGACATGGCCGAGCAAGGGCGACTGCGTC p_0010 RGEL01000035.1_1017_11717__5821_6576_R2 p_0002 p_0002 6916 85 GCACGTGCT 1 1.0 poor intergenic + GCACGTGCTCATCACCAACGTCACGACGCCGTCATCGAACGGCGCACCGGTGTCGGTACGAATCGAAGGTG 14 85 RGEL01000035.1_1017_11717__5821_6576 RGEL01000035.1_1017_11717__5821_6576_R2 intergenic 6831 6959 + up CAACGGGCCACATCGCACGTGCTCATCACCAACGTCACGACGCCGTCATCGAACGGCGCACCGGTGTCGGTACGAATCGAAGGTGATCTCGTCACCGAAATTGGCGCGGGCCTCGTCGCGCGCAACGG GCCCAACCTGCAACCGCTCGTCTGACAACGGGCCACATCGCACGTGCTCATCACCAACGTCACGACGCCGTCATCGAACGGCGCACCGGTGTCGGTACGAATCGAAGGTGATCTCGTCACCGAAATTGGCGCGGGCCTCGTCGCGCGCAACGGTGAATCGGTTTGAAATCGTCGCGTT p_0002 RFST01000005.1_21953_32497__29065_29826_F1 p_0001 p_0001 7012 101 TATTCCCGA 1 0.98 poor intergenic + TATTCCCGATCACGACCCACACGGTCGGTCGGATCGCTCTCCGACAGGCGCTGTTGGGCAGACTGGCGGTG 30 101 RFST01000005.1_21953_32497__29065_29826 RFST01000005.1_21953_32497__29065_29826_F1 intergenic 6906 7113 - up CGCCTGTGCAAAGCCGACAGGCAGGATTTCTATTCCCGATCACGACCCACACGGTCGGTCGGATCGCTCTCCGACAGGCGCTGTTGGGCAGACTGGCGGTGGAAGCGACGCAAGGGGGAAAGACATGATGTCGACACTGTGGGAGGCGTTTCGCCGCTCGTTGATGCTGAACACCACCCGTCCCGCACTGACCGTTGACGGCACCAC TCGGGGGTGACGGACACAGAGTTCACGCCTGTGCAAAGCCGACAGGCAGGATTTCTATTCCCGATCACGACCCACACGGTCGGTCGGATCGCTCTCCGACAGGCGCTGTTGGGCAGACTGGCGGTGGAAGCGACGCAAGGGGGAAAGACATGATGTCGACACTGTGGGAGGCGTTTCGCCGCTCGTTGATGCTGAACACCACCCGTCCCGCACTGACCGTTGACGGCACCACGTGGACCTACCGAGATCTCGCAGTG p_0001 SHYU01000025.1_14851_22560__19193_19945_R2 p_0012 p_0012 7263 164 TGGCTAAAT 3 1.0 poor intergenic + CCAAATCACATATTCGTCATCATGACAATGGTTGTCAACATTCTTGACGAAGTATTGGCTAAATTGCTACG 92 163 SHYU01000025.1_14851_22560__19193_19945 SHYU01000025.1_14851_22560__19193_19945_R2 intergenic 7255 7427 - up TCTTCCCGCCTCTCGTACATGTGGCTCAGTCAGAACCTCGTGACATCTGCTACCCGGCCAAGAGCCTCAGACTCATACGGCTCGGTGCGCTGACCAAATCACATATTCGTCATCATGACAATGGTTGTCAACATTCTTGACGAAGTATTGGCTAAATTGCTACGTTCTGTCC ATGACTGCAGCTGCGGTTCGCGGCATCTTCCCGCCTCTCGTACATGTGGCTCAGTCAGAACCTCGTGACATCTGCTACCCGGCCAAGAGCCTCAGACTCATACGGCTCGGTGCGCTGACCAAATCACATATTCGTCATCATGACAATGGTTGTCAACATTCTTGACGAAGTATTGGCTAAATTGCTACGTTCTGTCCATGCAGTACACAGTGCGCGCAGCAA p_0012 SHYU01000025.1_14851_22560__19193_19945_R3 p_0011 p_0011 7331 76 TGACGAATA 2 1.0 poor intergenic + GAACGTAGCAATTTAGCCAATACTTCGTCAAGAATGTTGACAACCATTGTCATGATGACGAATATGTGATT 5 76 SHYU01000025.1_14851_22560__19193_19945 SHYU01000025.1_14851_22560__19193_19945_R3 intergenic 7255 7427 + up GGACAGAACGTAGCAATTTAGCCAATACTTCGTCAAGAATGTTGACAACCATTGTCATGATGACGAATATGTGATTTGGTCAGCGCACCGAGCCGTATGAGTCTGAGGCTCTTGGCCGGGTAGCAGATGTCACGAGGTTCTGACTGAGCCACATGTACGAGAGGCGGGAAGA TTGCTGCGCGCACTGTGTACTGCATGGACAGAACGTAGCAATTTAGCCAATACTTCGTCAAGAATGTTGACAACCATTGTCATGATGACGAATATGTGATTTGGTCAGCGCACCGAGCCGTATGAGTCTGAGGCTCTTGGCCGGGTAGCAGATGTCACGAGGTTCTGACTGAGCCACATGTACGAGAGGCGGGAAGATGCCGCGAACCGCAGCTGCAGTCAT p_0011 RGSD01000015.1_1_13590__5003_5740_R3 p_0009 p_0009 10744 144 GGGAATAAT 2 0.7 poor intergenic + ACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGA 72 143 RGSD01000015.1_1_13590__5003_5740 RGSD01000015.1_1_13590__5003_5740_R3 intergenic 10712 10888 - up TGCTCTTCCTTTCGACGGCTTTCTTGTGGTCATGCTACCTACGGGGGAGTGGTGAACGAGGTGGCGGGGACACACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGAAATTCCGCGCGCCGCTGGGCATCTAAGGTGCA GCCCGGTCTGTGAAGCGTTCGAACATGCTCTTCCTTTCGACGGCTTTCTTGTGGTCATGCTACCTACGGGGGAGTGGTGAACGAGGTGGCGGGGACACACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGAAATTCCGCGCGCCGCTGGGCATCTAAGGTGCAGTGGTGCCCGTAAATCCGAACCGTT p_0009 RGSD01000015.1_1_13590__5003_5740_R4 p_0008 p_0008 10792 80 TGAGACAAA 2 0.7 poor intergenic + GATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAG 11 82 RGSD01000015.1_1_13590__5003_5740 RGSD01000015.1_1_13590__5003_5740_R4 intergenic 10712 10888 + up TGCACCTTAGATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAGCCATGTCTCACACGTGTTTCGGTGTGTCCCCGCCACCTCGTTCACCACTCCCCCGTAGGTAGCATGACCACAAGAAAGCCGTCGAAAGGAAGAGCA AACGGTTCGGATTTACGGGCACCACTGCACCTTAGATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAGCCATGTCTCACACGTGTTTCGGTGTGTCCCCGCCACCTCGTTCACCACTCCCCCGTAGGTAGCATGACCACAAGAAAGCCGTCGAAAGGAAGAGCATGTTCGAACGCTTCACAGACCGGGC p_0008 RGPI01000012.1_3922_16980__9936_10673_R3 p_0004 p_0004 11702 144 GGGAATAAT 2 0.7 poor intergenic + ACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGA 72 143 RGPI01000012.1_3922_16980__9936_10673 RGPI01000012.1_3922_16980__9936_10673_R3 intergenic 11670 11846 - up TGCTCTTCCTTTCGACGGCTTTCTTGTGGTCATGCTACCTACGGGGGAGTGGTGAACGAGGTGGCGGGGACACACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGAAATTCCGCGCGCCGCTGGGCATCTAAGGTGCA GCCCGGTCTGTGAAGCGTTCGAACATGCTCTTCCTTTCGACGGCTTTCTTGTGGTCATGCTACCTACGGGGGAGTGGTGAACGAGGTGGCGGGGACACACCGAAACACGTGTGAGACATGGCTCATCGTTTGTCTCAAAAAGTTGTCAAATCGGGGAATAATCGGGAGAAATTCCGCGCGCCGCTGGGCATCTAAGGTGCAGTGGTGCCCGTAAATCCGAACCGTT p_0004 RGPI01000012.1_3922_16980__9936_10673_R4 p_0003 p_0003 11750 80 TGAGACAAA 2 0.7 poor intergenic + GATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAG 11 82 RGPI01000012.1_3922_16980__9936_10673 RGPI01000012.1_3922_16980__9936_10673_R4 intergenic 11670 11846 + up TGCACCTTAGATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAGCCATGTCTCACACGTGTTTCGGTGTGTCCCCGCCACCTCGTTCACCACTCCCCCGTAGGTAGCATGACCACAAGAAAGCCGTCGAAAGGAAGAGCA AACGGTTCGGATTTACGGGCACCACTGCACCTTAGATGCCCAGCGGCGCGCGGAATTTCTCCCGATTATTCCCCGATTTGACAACTTTTTGAGACAAACGATGAGCCATGTCTCACACGTGTTTCGGTGTGTCCCCGCCACCTCGTTCACCACTCCCCCGTAGGTAGCATGACCACAAGAAAGCCGTCGAAAGGAAGAGCATGTTCGAACGCTTCACAGACCGGGC p_0003