##gff-version  3
# Sequence Data: seqnum=1;seqlen=8182;seqhdr="rs08885 putative operon"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="39|Rickettsia_conorii_Malish_7|B|32.4|11|1";gc_cont=32.40;transl_table=11;uses_sd=1
rs08885	Prodigal_v2.6.3	CDS	1	1452	219.0	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.316;conf=99.99;score=219.03;cscore=215.81;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
rs08885	Prodigal_v2.6.3	CDS	1672	2133	84.3	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.312;conf=100.00;score=84.29;cscore=70.57;sscore=13.72;rscore=5.66;uscore=5.16;tscore=2.90;
rs08885	Prodigal_v2.6.3	CDS	2239	3432	202.3	-	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.296;conf=99.99;score=203.36;cscore=189.00;sscore=14.36;rscore=7.43;uscore=3.00;tscore=2.90;
rs08885	Prodigal_v2.6.3	CDS	3455	4120	102.9	-	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.287;conf=100.00;score=103.80;cscore=94.55;sscore=9.25;rscore=7.43;uscore=-1.99;tscore=2.90;
rs08885	Prodigal_v2.6.3	CDS	4154	5257	141.5	-	0	ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.288;conf=100.00;score=140.86;cscore=137.36;sscore=3.50;rscore=5.67;uscore=2.97;tscore=-4.48;
rs08885	Prodigal_v2.6.3	CDS	5699	8182	386.3	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.273;conf=99.99;score=386.29;cscore=372.71;sscore=13.57;rscore=7.43;uscore=3.25;tscore=2.90;
chrom	db	type	start	end	name	strand	score	description
CDS_0005	ProPr	promoter	107.0	178.0	prom_0002	+	1.0	ID=p_0002;locus_tag=p_0002;TSS=178.0;class=intergenic;min10seq=ATTCTAAAT;min10score=3;min10class=weak;promseq=TATTAACATATATTTTTTAAAAAAATAGTTTGCAAAGTAAAATAATTTATGATACATTCTAAATATAAATT
CDS_0006	ProPr	promoter	265.0	336.0	prom_0001	+	1.0	ID=p_0001;locus_tag=p_0001;TSS=336.0;class=intergenic;min10seq=ATATATAAT;min10score=5;min10class=strong;promseq=AATGTATCATAAATTATTTTACTTTGCAAACTATTTTTTTAAAAAATATATGTTAATATATAATATAGAAT
rs08885	ProPr	promoter	5515	5586	1.0	-	.	ID=p_0002;locus_tag=p_0002;TSS=5515;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TATTAACATATATTTTTTAAAAAAATAGTTTGCAAAGTAAAATAATTTATGATACATTCTAAATATAAATT
rs08885	ProPr	promoter	5528	5599	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=5599;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=AATGTATCATAAATTATTTTACTTTGCAAACTATTTTTTTAAAAAATATATGTTAATATATAATATAGAAT
rs08885	ProPr	gene	1	1452	CDS_0001	+	99.99	ID=CDS_0001;locus_tag=CDS_0001;RBS=None;conf=99.99;prodigalID=1_1;
rs08885	ProPr	gene	1672	2133	CDS_0002	-	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
rs08885	ProPr	gene	2239	3432	CDS_0003	-	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=AGGAG;conf=99.99;prodigalID=1_3;
rs08885	ProPr	gene	3455	4120	CDS_0004	-	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
rs08885	ProPr	gene	4154	5257	CDS_0005	-	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAGG;conf=100.00;prodigalID=1_5;
rs08885	ProPr	gene	5699	8182	CDS_0006	+	99.99	ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGAG;conf=99.99;prodigalID=1_6;
rs08885	ProPr	promoter	5515	5586	1.0	-	.	ID=p_0002;locus_tag=p_0002;TSS=5515;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=TATTAACATATATTTTTTAAAAAAATAGTTTGCAAAGTAAAATAATTTATGATACATTCTAAATATAAATT
rs08885	ProPr	promoter	5528	5599	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=5599;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=AATGTATCATAAATTATTTTACTTTGCAAACTATTTTTTTAAAAAATATATGTTAATATATAATATAGAAT
rs08885	FACoP_TransTerm	TransTerm	1512	1555	28	+	.	ID=TTerm_0001;locus_tag=TTerm_0001;Upstream_gene=CDS_0001;FACoPscore=28;TTseq=GAATATAATATTGAATTAAT TTAT ATTACTGGAATTTTTAATTC CAGTAATAT
rs08885	FACoP_TransTerm	TransTerm	1512	1555	28	+	.	ID=TTerm_0002;locus_tag=TTerm_0002;Upstream_gene=CDS_0002;FACoPscore=28;TTseq=GAATATAATATTGAATTAAT TTAT ATTACTGGAATTTTTAATTC CAGTAATAT
rs08885	FACoP_TransTerm	TransTerm	1597	1612	24	-	.	ID=TTerm_0003;locus_tag=TTerm_0003;Upstream_gene=CDS_0001;FACoPscore=24;TTseq=TTTTTA ATAA TAAAAA ACTTTTAAT
rs08885	FACoP_TransTerm	TransTerm	1597	1612	24	-	.	ID=TTerm_0004;locus_tag=TTerm_0004;Upstream_gene=CDS_0002;FACoPscore=24;TTseq=TTTTTA ATAA TAAAAA ACTTTTAAT
rs08885	FACoP_TransTerm	TransTerm	2226	2247	26	-	.	ID=TTerm_0005;locus_tag=TTerm_0005;Upstream_gene=CDS_0003;FACoPscore=26;TTseq=ATTATATAA ATGA TTATATGAT TGATATTTT
rs08885	FACoP	operon	1	1452	.	+	#37A397	ID=operon_0001;locus_tag=operon_0001;Name=operon_0001;operon_members=CDS_0001;
rs08885	FACoP	operon	1672	2133	.	-	#45CCBC	ID=operon_0002;locus_tag=operon_0002;Name=operon_0002;operon_members=CDS_0002;
rs08885	FACoP	operon	2239	5257	.	-	#37A397	ID=operon_0003;locus_tag=operon_0003;Name=operon_0003;operon_members=CDS_0003,CDS_0004,CDS_0005;
rs08885	FACoP	operon	5699	8182	.	+	#45CCBC	ID=operon_0004;locus_tag=operon_0004;Name=operon_0004;operon_members=CDS_0006;
rs08885	ProPr	gene	1	1452	CDS_0001	+	99.99	ID=CDS_0001;locus_tag=CDS_0001;RBS=None;conf=99.99;prodigalID=1_1;
rs08885	ProPr	gene	1672	2133	CDS_0002	-	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
rs08885	ProPr	gene	2239	3432	CDS_0003	-	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=AGGAG;conf=99.99;prodigalID=1_3;
rs08885	ProPr	gene	3455	4120	CDS_0004	-	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
rs08885	ProPr	gene	4154	5257	CDS_0005	-	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=AGGAGG;conf=100.00;prodigalID=1_5;
rs08885	ProPr	gene	5699	8182	CDS_0006	+	99.99	ID=CDS_0006;locus_tag=CDS_0006;RBS=AGGAG;conf=99.99;prodigalID=1_6;