##gff-version  3
# Sequence Data: seqnum=1;seqlen=6803;seqhdr="RS00455 putative operon"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="32|Orientia_tsutsugamushi_Boryong|B|30.5|11|1";gc_cont=30.50;transl_table=11;uses_sd=1
RS00455	Prodigal_v2.6.3	CDS	2	847	93.7	-	0	ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.251;conf=100.00;score=93.02;cscore=79.69;sscore=13.33;rscore=9.86;uscore=1.36;tscore=2.76;
RS00455	Prodigal_v2.6.3	CDS	1064	2230	173.4	+	0	ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.327;conf=100.00;score=173.40;cscore=167.71;sscore=5.70;rscore=7.34;uscore=-0.47;tscore=-1.17;
RS00455	Prodigal_v2.6.3	CDS	2252	3898	226.3	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.318;conf=99.99;score=227.38;cscore=215.59;sscore=11.79;rscore=7.34;uscore=0.64;tscore=2.76;
RS00455	Prodigal_v2.6.3	CDS	3995	5368	165.9	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.289;conf=100.00;score=165.91;cscore=151.85;sscore=14.06;rscore=9.86;uscore=1.44;tscore=2.76;
RS00455	Prodigal_v2.6.3	CDS	5813	6766	154.9	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.288;conf=100.00;score=154.21;cscore=142.15;sscore=12.06;rscore=7.34;uscore=2.61;tscore=2.76;
chrom	db	type	start	end	name	strand	score	description
CDS_0002	ProPr	promoter	134.0	205.0	prom_0001	+	0.96	ID=p_0001;locus_tag=p_0001;TSS=205.0;class=intergenic;min10seq=ATTTAAATA;min10score=3;min10class=weak;promseq=CTGTATATTAAAATAACTTAAAAAAATTATTTTATTATAAGTGCAAAATATACCTATTTAAATAAGATAAG
CDS_0005	ProPr	promoter	286.0	357.0	prom_0002	+	1.0	ID=p_0002;locus_tag=p_0002;TSS=357.0;class=intergenic;min10seq=TTTTTATAT;min10score=3;min10class=weak;promseq=GTGGTGGTACAAGAAAAGTATCACCTTTTTTTTGTTATACAAAAAAACAGTTGACTTTTTATATGAACCCC
RS00455	ProPr	promoter	977	1048	0.96	+	.	ID=p_0001;locus_tag=p_0001;TSS=1048;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=CTGTATATTAAAATAACTTAAAAAAATTATTTTATTATAAGTGCAAAATATACCTATTTAAATAAGATAAG
RS00455	ProPr	promoter	5660	5731	1.0	+	.	ID=p_0002;locus_tag=p_0002;TSS=5731;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=GTGGTGGTACAAGAAAAGTATCACCTTTTTTTTGTTATACAAAAAAACAGTTGACTTTTTATATGAACCCC
RS00455	ProPr	gene	2	847	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGAG;conf=100.00;prodigalID=1_1;
RS00455	ProPr	gene	1064	2230	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
RS00455	ProPr	gene	2252	3898	CDS_0003	+	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=99.99;prodigalID=1_3;
RS00455	ProPr	gene	3995	5368	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
RS00455	ProPr	gene	5813	6766	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_5;
RS00455	ProPr	promoter	977	1048	0.96	+	.	ID=p_0001;locus_tag=p_0001;TSS=1048;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=CTGTATATTAAAATAACTTAAAAAAATTATTTTATTATAAGTGCAAAATATACCTATTTAAATAAGATAAG
RS00455	ProPr	promoter	5660	5731	1.0	+	.	ID=p_0002;locus_tag=p_0002;TSS=5731;Downstream_locus_tag=p_0002;class=intergenic;promoterSeq=GTGGTGGTACAAGAAAAGTATCACCTTTTTTTTGTTATACAAAAAAACAGTTGACTTTTTATATGAACCCC
RS00455	ProPr	gene	2	847	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=AGGAG;conf=100.00;prodigalID=1_1;
RS00455	ProPr	gene	1064	2230	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_2;
RS00455	ProPr	gene	2252	3898	CDS_0003	+	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=GGAG/GAGG;conf=99.99;prodigalID=1_3;
RS00455	ProPr	gene	3995	5368	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGAG;conf=100.00;prodigalID=1_4;
RS00455	ProPr	gene	5813	6766	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGAG/GAGG;conf=100.00;prodigalID=1_5;