chrom Lstart Lend Lstem Rstart Rend Rstem loop match% Indels score AT GC ATpairs GCpairs GTpairs Center Lseq Rseq intergenic tailL tailR polyTL polyTR strand TTseq FACoPscore locus_tag type start end strand_y stream seq aug_seq 3primeUTR 3primeUTRlen ID NZ_LR027880.1 12971 12984 14 12989 13002 14 4 100 0 28 64 35 64 35 0 12986 AAAAAAACAGGGTG CACCCTGTTTTTTT True GTCAGAACA ACCATCCAC True True + AAAAAAACAGGGTG GCAG CACCCTGTTTTTTT ACCATCCAC 88 RIL182_RS00045 intergenic 12962 13098 + down GTCAGAACAAAAAAACAGGGTGGCAGCACCCTGTTTTTTTACCATCCACCGCCTAAAACCGACCACCTGCCGCAAATCAGTAGAAACCGTTCCAGACATTGCCTATAATGACATCAGAAAGGAGGAAGTGAGAAAA AAACGTTGATGAGTTATCAAAATAAGTCAGAACAAAAAAACAGGGTGGCAGCACCCTGTTTTTTTACCATCCACCGCCTAAAACCGACCACCTGCCGCAAATCAGTAGAAACCGTTCCAGACATTGCCTATAATGACATCAGAAAGGAGGAAGTGAGAAAATGCAAATAGAAATAAAACTCGACGA GTCAGAACAAAAAAACAGGGTGGCAGCACCCTGTTTTTTT 40 TTerm_0001 NZ_LR027880.1 20463 20481 19 20486 20504 19 4 94 0 33 81 18 83 16 0 20483 AAAAAGCAATCAGTTATAA TTATAATTGATTGCTTTTT True TGAATCATA TAATCATGG True True + AAAAAGCAATCAGTTATAA TTAT TTATAATTGATTGCTTTTT TAATCATGG 66 RIL182_RS00085 intergenic 20356 20578 + down AAAAATTTACTGTTTGAACAAATATGAAGGCTGTATTTAAAAAGGTTAAAGATACCTGAAATTCCAGAAACAGATGACCGGGAGCAAACGGTAACTGTTGAATCATAAAAAGCAATCAGTTATAATTATTTATAATTGATTGCTTTTTTAATCATGGAAACATATTTTTGTAGAACAGAATTTATTTTTGCAAAAAGATTTTTAATTACATGGAGGAAAATA CGGGGAGATATCGGCGATCCGTTAAAAAAATTTACTGTTTGAACAAATATGAAGGCTGTATTTAAAAAGGTTAAAGATACCTGAAATTCCAGAAACAGATGACCGGGAGCAAACGGTAACTGTTGAATCATAAAAAGCAATCAGTTATAATTATTTATAATTGATTGCTTTTTTAATCATGGAAACATATTTTTGTAGAACAGAATTTATTTTTGCAAAAAGATTTTTAATTACATGGAGGAAAATATGCCGCAGAACTGTTATGAACTCGT AAAAATTTACTGTTTGAACAAATATGAAGGCTGTATTTAAAAAGGTTAAAGATACCTGAAATTCCAGAAACAGATGACCGGGAGCAAACGGTAACTGTTGAATCATAAAAAGCAATCAGTTATAATTATTTATAATTGATTGCTTTTT 148 TTerm_0002 NZ_LR027880.1 22586 22591 6 22601 22606 6 9 100 0 12 83 16 83 16 0 22595 TTTTCA TGAAAA True AATAAGATT CGTTGTTTT False True + TTTTCA CACTGCAAA TGAAAA CGTTGTTTT 32 RIL182_RS00095 intergenic 22560 22648 + down AGGAGGATAGTGTGAAAAATAAGATTTTTCACACTGCAAATGAAAACGTTGTTTTCATTGAAAAGCAGCGCAAGAATGGAGGATATCA CCGTCATGTGGTAAGGGAAGTTTAAAGGAGGATAGTGTGAAAAATAAGATTTTTCACACTGCAAATGAAAACGTTGTTTTCATTGAAAAGCAGCGCAAGAATGGAGGATATCATGGATAAGCATATTACGACGCCGAT AGGAGGATAGTGTGAAAAATAAGATTTTTCACACTGCAAATGAAAA 46 TTerm_0003 NZ_LR027880.1 30558 30568 11 30574 30584 11 5 90 0 17 59 40 60 40 0 30570 AAGGCTTTAGG CCTAAAGTCTT True GAAAATAGA TTGTTGTAT True True + AAGGCTTTAGG TTTTT CCTAAAGTCTT TTGTTGTAT 50 RIL182_RS00140 intergenic 30547 30832 + down CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCA ATCGGTTCGATTCCGATTGTCGCCTCTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCATGGAGAATAAAAAAGGTGTATTGTT CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTT 37 TTerm_0004 NZ_LR027880.1 30631 30644 14 30651 30664 14 6 78 0 13 92 7 100 0 0 30647 ATAAATTTACAAAA TTTTTAAAATCTAT True TAAAAAGTA TTTTTGTGA True True + ATAAATTTACAAAA ATTGAC TTTTTAAAATCTAT TTTTTGTGA 26 RIL182_RS00140 intergenic 30547 30832 + down CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCA ATCGGTTCGATTCCGATTGTCGCCTCTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCATGGAGAATAAAAAAGGTGTATTGTT CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTAT 117 TTerm_0005 NZ_LR027880.1 32968 32978 11 32984 32994 11 5 90 0 17 31 68 30 70 0 32980 ATCCCTGTCCG CGGACGGGGAT True TCTGGTTGA TTTCCTGTT False True + ATCCCTGTCCG CATGT CGGACGGGGAT TTTCCTGTT 74 RIL182_RS00145 intergenic 32892 33073 + down TAAATAAGTAGAACATCAATTAAAAAGGTCAAATGACAAAGTGAATTCCGGTTTGTCAAAGTAAATGTCTGGTTGATCCCTGTCCGCATGTCGGACGGGGATTTTCCTGTTTTTTTTGCCTTAGTAAATTCCACCCGTATGAGTAGGCCTATGCAGCTGTGTCCCGGTTTGTCATGTCAGT GATTTCTGTATTTAAAACAGAATAATAAATAAGTAGAACATCAATTAAAAAGGTCAAATGACAAAGTGAATTCCGGTTTGTCAAAGTAAATGTCTGGTTGATCCCTGTCCGCATGTCGGACGGGGATTTTCCTGTTTTTTTTGCCTTAGTAAATTCCACCCGTATGAGTAGGCCTATGCAGCTGTGTCCCGGTTTGTCATGTCAGTTAAAAGAATTCATCTTTGGAGAGAA TAAATAAGTAGAACATCAATTAAAAAGGTCAAATGACAAAGTGAATTCCGGTTTGTCAAAGTAAATGTCTGGTTGATCCCTGTCCGCATGTCGGACGGGGAT 102 TTerm_0006 NZ_LR027880.1 32968 32978 11 32984 32994 11 5 90 0 17 31 68 30 70 0 32980 ATCCCTGTCCG CGGACGGGGAT True TCTGGTTGA TTTCCTGTT False True + ATCCCTGTCCG CATGT CGGACGGGGAT TTTCCTGTT 74 RIL182_RS00150 intergenic 32892 33073 - down ACTGACATGACAAACCGGGACACAGCTGCATAGGCCTACTCATACGGGTGGAATTTACTAAGGCAAAAAAAACAGGAAAATCCCCGTCCGACATGCGGACAGGGATCAACCAGACATTTACTTTGACAAACCGGAATTCACTTTGTCATTTGACCTTTTTAATTGATGTTCTACTTATTTA TTCTCTCCAAAGATGAATTCTTTTAACTGACATGACAAACCGGGACACAGCTGCATAGGCCTACTCATACGGGTGGAATTTACTAAGGCAAAAAAAACAGGAAAATCCCCGTCCGACATGCGGACAGGGATCAACCAGACATTTACTTTGACAAACCGGAATTCACTTTGTCATTTGACCTTTTTAATTGATGTTCTACTTATTTATTATTCTGTTTTAAATACAGAAATC TAAATAAGTAGAACATCAATTAAAAAGGTCAAATGACAAAGTGAATTCCGGTTTGTCAAAGTAAATGTCTGGTTGATCCCTGTCCGCATGTCGGACGGGGAT 102 TTerm_0007 NZ_LR027880.1 50684 50700 17 50706 50722 17 5 100 0 34 58 41 58 41 0 50702 CAAAAGCTGTCTGTTTC GAAACAGACAGCTTTTG True ACGAAAATC CAACCTTAC True True + CAAAAGCTGTCTGTTTC TGTTG GAAACAGACAGCTTTTG CAACCTTAC 84 RIL182_RS00245 intergenic 50611 51054 + down CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTA CCCCTTCAACATCATCGAGCCGTAACGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTATGAAAAATGATATGAAGCTTGTGCG CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTG 111 TTerm_0008 NZ_LR027880.1 50917 50932 16 50937 50952 16 4 100 0 32 62 37 62 37 0 50934 GTGCGAAAAATAAGCT AGCTTATTTTTCGCAC True AGAAAGTAG GGCTATTTG True True + GTGCGAAAAATAAGCT TGAT AGCTTATTTTTCGCAC GGCTATTTG 80 RIL182_RS00245 intergenic 50611 51054 + down CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTA CCCCTTCAACATCATCGAGCCGTAACGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTATGAAAAATGATATGAAGCTTGTGCG CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCAC 341 TTerm_0009 NZ_LR027880.1 70666 70676 11 70683 70693 11 6 90 0 17 59 40 60 40 0 70679 TACAGAATCAC GTGGTTCTGTA True AGGTATATT TTTTTTTAC False True + TACAGAATCAC AAAAAC GTGGTTCTGTA TTTTTTTAC 58 RIL182_RS00335 intergenic 70472 70813 + down AGGAATTCCGGCATCAAAATATATGATGTTAAAACCAAATAGTGCTTCACAACATGGCGGCTGACAAATTGCGCAAAGCCGAGAATGCTTTTCTTATTTTCGGACAACGGAACAAAACAGGCACGGCTTTGCGCAATTTGTCAATCAATAAACCTGAACGCACTATTTGTGCCAACAACATTATAAGGTATATTACAGAATCACAAAAACGTGGTTCTGTATTTTTTTACCCATTTTTTACATAAACCCCCACACCCATTTTACAATATCCGCTTAGGATATAGGGTAAAGATGAGAGAAATAAAAGAATCGATGCCGGACAGGCGGATTTAGTGCGCAGA TTATGAGGCGGCGCATAAGGATTAAAGGAATTCCGGCATCAAAATATATGATGTTAAAACCAAATAGTGCTTCACAACATGGCGGCTGACAAATTGCGCAAAGCCGAGAATGCTTTTCTTATTTTCGGACAACGGAACAAAACAGGCACGGCTTTGCGCAATTTGTCAATCAATAAACCTGAACGCACTATTTGTGCCAACAACATTATAAGGTATATTACAGAATCACAAAAACGTGGTTCTGTATTTTTTTACCCATTTTTTACATAAACCCCCACACCCATTTTACAATATCCGCTTAGGATATAGGGTAAAGATGAGAGAAATAAAAGAATCGATGCCGGACAGGCGGATTTAGTGCGCAGATGGAAGAAACCGGCAGGAATGGAGA AGGAATTCCGGCATCAAAATATATGATGTTAAAACCAAATAGTGCTTCACAACATGGCGGCTGACAAATTGCGCAAAGCCGAGAATGCTTTTCTTATTTTCGGACAACGGAACAAAACAGGCACGGCTTTGCGCAATTTGTCAATCAATAAACCTGAACGCACTATTTGTGCCAACAACATTATAAGGTATATTACAGAATCACAAAAACGTGGTTCTGTA 221 TTerm_0010 NZ_LR027880.1 92779 92784 6 92792 92797 6 7 100 0 12 50 50 50 50 0 92787 CTATCC GGATAG True AGGGTTTTC GGTTTTCTG False True + CTATCC CTGTTAA GGATAG GGTTTTCTG 48 RIL182_RS00425 intergenic 92766 92938 + down GGATAGGGTTTTCTATCCCTGTTAAGGATAGGGTTTTCTGTCTTTAGCAATTTTTTTATTGACAAAACATAGTATTCATATTAACATAATAGGAAATAAAAAGATAAAGATGAAACATATTTAATATAAAAACTGGATCCGCGGCAGAACGGCGGAGAAAAGGAGACTAGTG TGGATTTGTAACCCTATCCTGTTAAGGATAGGGTTTTCTATCCCTGTTAAGGATAGGGTTTTCTGTCTTTAGCAATTTTTTTATTGACAAAACATAGTATTCATATTAACATAATAGGAAATAAAAAGATAAAGATGAAACATATTTAATATAAAAACTGGATCCGCGGCAGAACGGCGGAGAAAAGGAGACTAGTGTGAAAGAAATATTATGCTTTGGAGA GGATAGGGTTTTCTATCCCTGTTAAGGATAG 31 TTerm_0011 NZ_LR027880.1 95190 95195 6 95205 95210 6 9 100 0 12 33 66 33 66 0 95199 AGCCGT ACGGCT True CTATTTCCA ATTTTATTA False True + AGCCGT TCTTATTGG ACGGCT ATTTTATTA 56 RIL182_RS00440 intergenic 94957 95245 + down GGTAAAAACACAATAAAAATCTGATTATCCGCTAAAACACAGTATCTATCAGCATTTTCAAGGAAACAAACACATCAATTTACTACTTATTTACTACTAACGAATGAGCCTTGATACGCAAGTTTTCCTAGATATGCAAAGATATGGTACAGCACATCAGTATTGAAACAAGAAAAAATTGAATAACTTATAGACTATGGAACGCCTAAAATGACGTTCCTTTTCTATTTCCAGCCGTTCTTATTGGACGGCTATTTTATTACCAAAAATGAAAGGAGCATTAAACTA AAACCATAAAGTCTGGAATATGTAAGGTAAAAACACAATAAAAATCTGATTATCCGCTAAAACACAGTATCTATCAGCATTTTCAAGGAAACAAACACATCAATTTACTACTTATTTACTACTAACGAATGAGCCTTGATACGCAAGTTTTCCTAGATATGCAAAGATATGGTACAGCACATCAGTATTGAAACAAGAAAAAATTGAATAACTTATAGACTATGGAACGCCTAAAATGACGTTCCTTTTCTATTTCCAGCCGTTCTTATTGGACGGCTATTTTATTACCAAAAATGAAAGGAGCATTAAACTATGAAAAAGACATGGAAACGATTGTG GGTAAAAACACAATAAAAATCTGATTATCCGCTAAAACACAGTATCTATCAGCATTTTCAAGGAAACAAACACATCAATTTACTACTTATTTACTACTAACGAATGAGCCTTGATACGCAAGTTTTCCTAGATATGCAAAGATATGGTACAGCACATCAGTATTGAAACAAGAAAAAATTGAATAACTTATAGACTATGGAACGCCTAAAATGACGTTCCTTTTCTATTTCCAGCCGTTCTTATTGGACGGCT 253 TTerm_0012 NZ_LR027880.1 124129 124151 23 124160 124182 23 8 91 0 36 52 47 52 47 0 124155 AAACATCCGGGGCAAAACAGATA TATCCGTTTCGCCCCGGATGTTT True TAAATTTTA TTGCAATCA True True + AAACATCCGGGGCAAAACAGATA TCTTTGAG TATCCGTTTCGCCCCGGATGTTT TTGCAATCA 96 RIL182_RS00615 intergenic 124096 124208 + down GTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTTTTGCAATCATTTTATGGTCAGCTTTT GATCGCAACGAAAAATGTGGAGTAAGTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTTTTGCAATCATTTTATGGTCAGCTTTTTATTTGCTATAAAATACTGATGTAG GTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTT 86 TTerm_0013 NZ_LR027880.1 124129 124151 23 124160 124182 23 8 91 0 36 52 47 52 47 0 124155 AAACATCCGGGGCAAAACAGATA TATCCGTTTCGCCCCGGATGTTT True TAAATTTTA TTGCAATCA True True + AAACATCCGGGGCAAAACAGATA TCTTTGAG TATCCGTTTCGCCCCGGATGTTT TTGCAATCA 96 RIL182_RS00620 intergenic 124096 124208 - down AAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTTTAAAATTTATTCACACCGCATGTAATCTATAAC CTACATCAGTATTTTATAGCAAATAAAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTTTAAAATTTATTCACACCGCATGTAATCTATAACTTACTCCACATTTTTCGTTGCGATC GTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTT 86 TTerm_0014 NZ_LR027880.1 130628 130647 20 130655 130674 20 7 80 0 20 70 30 75 25 0 130650 AAAACCTTTCGTCCTTTTAT ATAAAAAGATGGGAGGTTTT True CATTTTATA TTTATGTCG True True + AAAACCTTTCGTCCTTTTAT GATAAAG ATAAAAAGATGGGAGGTTTT TTTATGTCG 40 RIL182_RS00635 intergenic 130588 130678 + down TAAAAAAACGATACTCAATTAAAAAATAAGACATTTTATAAAACCTTTCGTCCTTTTATGATAAAGATAAAAAGATGGGAGGTTTTTTTA AGAGAATATTAATATTTCCATTTAATAAAAAAACGATACTCAATTAAAAAATAAGACATTTTATAAAACCTTTCGTCCTTTTATGATAAAGATAAAAAGATGGGAGGTTTTTTTATGTCGAAAAAAATAAAACTGCATCA TAAAAAAACGATACTCAATTAAAAAATAAGACATTTTATAAAACCTTTCGTCCTTTTATGATAAAGATAAAAAGATGGGAGGTTTT 86 TTerm_0015 NZ_LR027880.1 132697 132705 9 132711 132719 9 5 88 0 13 38 61 37 62 0 132707 GCTCTGTTC GAACAGGGC True AAAGAGATG TTTATTTTT False True + GCTCTGTTC AATTG GAACAGGGC TTTATTTTT 50 RIL182_RS00650 intergenic 132662 132721 + down TTTGGTTATAATATATATAAGATAGTAAAGAGATGCTCTGTTCAATTGGAACAGGGCTT GGATATTATTTACAAAAAAGAATAGTTTGGTTATAATATATATAAGATAGTAAAGAGATGCTCTGTTCAATTGGAACAGGGCTTTATTTTTTTGCAAGTTCCGGTGTAT TTTGGTTATAATATATATAAGATAGTAAAGAGATGCTCTGTTCAATTGGAACAGGGC 57 TTerm_0016 NZ_LR027880.1 132697 132705 9 132711 132719 9 5 88 0 13 38 61 37 62 0 132707 GCTCTGTTC GAACAGGGC True AAAGAGATG TTTATTTTT False True + GCTCTGTTC AATTG GAACAGGGC TTTATTTTT 50 RIL182_RS00655 intergenic 132662 132721 - down AAGCCCTGTTCCAATTGAACAGAGCATCTCTTTACTATCTTATATATATTATAACCAAA ATACACCGGAACTTGCAAAAAAATAAAGCCCTGTTCCAATTGAACAGAGCATCTCTTTACTATCTTATATATATTATAACCAAACTATTCTTTTTTGTAAATAATATCC TTTGGTTATAATATATATAAGATAGTAAAGAGATGCTCTGTTCAATTGGAACAGGGC 57 TTerm_0017 NZ_LR027880.1 143518 143524 7 143530 143536 7 5 100 0 14 14 85 14 85 0 143526 GGGGCTG CAGCCCC True CGCTTATGG TTGTTTTAC False True + GGGGCTG TTGAT CAGCCCC TTGTTTTAC 68 RIL182_RS00695 intergenic 143212 143584 + down AACAGGAAACATTTTATGAATGCGGCATAGAATATAACAGATAGAAACAAAAATCCGCAATCGAGTTTTTCACACGGAAAACCGGAAGTAAAAAGTGATGCAGTAGAATGGATAATATACATGATTGTCGATTGCTTTTAAATAAGAAGTAACACCCAGACCAAAAATCGGCGACGATTTTGTCGAAAGATGAGGTTTGGGGTACATAATTCCCGAAAATCCGCAGTTGATGCGAACTGTTGCGCGGGGGAATTTCTTGACAAAAGTACGGGCACCGTGTTATCATTCAGACTGTTGCGCTTATGGGGGCTGTTGATCAGCCCCTTGTTTTACGCGCGCCAATGGCGCACGTTTCTATAGAAAGGAAATATA CTTAGCAGATGTGAGTGACAAATAAAACAGGAAACATTTTATGAATGCGGCATAGAATATAACAGATAGAAACAAAAATCCGCAATCGAGTTTTTCACACGGAAAACCGGAAGTAAAAAGTGATGCAGTAGAATGGATAATATACATGATTGTCGATTGCTTTTAAATAAGAAGTAACACCCAGACCAAAAATCGGCGACGATTTTGTCGAAAGATGAGGTTTGGGGTACATAATTCCCGAAAATCCGCAGTTGATGCGAACTGTTGCGCGGGGGAATTTCTTGACAAAAGTACGGGCACCGTGTTATCATTCAGACTGTTGCGCTTATGGGGGCTGTTGATCAGCCCCTTGTTTTACGCGCGCCAATGGCGCACGTTTCTATAGAAAGGAAATATATGGAAACAGTTAGATTCGATCAGTT AACAGGAAACATTTTATGAATGCGGCATAGAATATAACAGATAGAAACAAAAATCCGCAATCGAGTTTTTCACACGGAAAACCGGAAGTAAAAAGTGATGCAGTAGAATGGATAATATACATGATTGTCGATTGCTTTTAAATAAGAAGTAACACCCAGACCAAAAATCGGCGACGATTTTGTCGAAAGATGAGGTTTGGGGTACATAATTCCCGAAAATCCGCAGTTGATGCGAACTGTTGCGCGGGGGAATTTCTTGACAAAAGTACGGGCACCGTGTTATCATTCAGACTGTTGCGCTTATGGGGGCTGTTGATCAGCCCC 324 TTerm_0018 NZ_LR027880.1 156274 156299 26 156307 156332 26 7 76 0 22 57 42 55 45 0 156302 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True + AAAAATAAAAGCCCCTGTTCTGCCTG TGAATTC CAGGCAAAGCAGGGGATATCAATTTT GGGTATCAA 76 RIL182_RS00750 intergenic 156252 156470 + down GCGCGCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA ACTTCGCCAGAAAAAGAAGTCTTAAGCGCGCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA GCGCGCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTT 80 TTerm_0019 NZ_LR027880.1 159991 160005 15 160011 160025 15 5 93 0 25 50 50 50 50 0 160007 AAAACGTGGCATGGC GCTATGCCACGTTTT True ACAGAATAA GTGTGGAAA True True + AAAACGTGGCATGGC GTAAA GCTATGCCACGTTTT GTGTGGAAA 74 RIL182_RS00770 intergenic 159906 160121 + down GACGGATGATTGGAACTGTTGGTACGGGTAGAATTTTCCGTGCATGACAGTACGTTTTAAATACAAAACAAATATGACAGAATAAAAACGTGGCATGGCGTAAAGCTATGCCACGTTTTGTGTGGAAACACATGTGAAAAATTGAATTTTCTACATGTAGGAATGTGCTTATGTTCAAATTTGTTATACAGAAAGACTGTGCAGGAATGTACTTA TATCATCACTGCAGCACTTGCATAAGACGGATGATTGGAACTGTTGGTACGGGTAGAATTTTCCGTGCATGACAGTACGTTTTAAATACAAAACAAATATGACAGAATAAAAACGTGGCATGGCGTAAAGCTATGCCACGTTTTGTGTGGAAACACATGTGAAAAATTGAATTTTCTACATGTAGGAATGTGCTTATGTTCAAATTTGTTATACAGAAAGACTGTGCAGGAATGTACTTATGCTCAAATTTGTGATACAAAAAGA GACGGATGATTGGAACTGTTGGTACGGGTAGAATTTTCCGTGCATGACAGTACGTTTTAAATACAAAACAAATATGACAGAATAAAAACGTGGCATGGCGTAAAGCTATGCCACGTTTT 119 TTerm_0020 NZ_LR027880.1 178659 178675 17 178681 178697 17 5 94 0 29 67 32 68 31 0 178677 AAAAAACGGATAGTGCA TGCATTATCCGTTTTTT True TAACTGTAA GTCAAAAAA True True + AAAAAACGGATAGTGCA AAAAA TGCATTATCCGTTTTTT GTCAAAAAA 74 RIL182_RS00880 intergenic 178527 178899 + down ACTCTGCCTTTCTAATTGAGAAAGTGGTTCTATATTCGAATAAGGTCATGCCGGTGTATTTTTTAGTAATCCGGTTCAGATAGTCACCGCTGTAACTGAGCAGACCAGCCTGGATGGAAACAATAACTGTAAAAAAACGGATAGTGCAAAAAATGCATTATCCGTTTTTTGTCAAAAAAAGTTGAAGAGCGTCGTTAAAACACTAAAAATATACATTTGTAATTGACGTGTATTTTACAAAACATTAAAATAAAAATGGTGAATCACGCAAATATAAACGAAAAAGGAATGATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTGAGATGCGCAAAAGACAGCGCAAGAA AGAGTATGGATTCTACATAAGATAAACTCTGCCTTTCTAATTGAGAAAGTGGTTCTATATTCGAATAAGGTCATGCCGGTGTATTTTTTAGTAATCCGGTTCAGATAGTCACCGCTGTAACTGAGCAGACCAGCCTGGATGGAAACAATAACTGTAAAAAAACGGATAGTGCAAAAAATGCATTATCCGTTTTTTGTCAAAAAAAGTTGAAGAGCGTCGTTAAAACACTAAAAATATACATTTGTAATTGACGTGTATTTTACAAAACATTAAAATAAAAATGGTGAATCACGCAAATATAAACGAAAAAGGAATGATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTGAGATGCGCAAAAGACAGCGCAAGAATGGAGATTAATTTGAAAAAGTACAT ACTCTGCCTTTCTAATTGAGAAAGTGGTTCTATATTCGAATAAGGTCATGCCGGTGTATTTTTTAGTAATCCGGTTCAGATAGTCACCGCTGTAACTGAGCAGACCAGCCTGGATGGAAACAATAACTGTAAAAAAACGGATAGTGCAAAAAATGCATTATCCGTTTTTT 170 TTerm_0021 NZ_LR027880.1 187348 187362 15 187368 187381 14 5 86 6 13 75 24 76 23 0 187364 AAAAGGAAATGAGTT AACTCTTTCTTTTT True ACTATCAGA TAAACAGGA True True + AAAAGGAAATGAGTT CTAGC AACTCTTTCTTTTT TAAACAGGA 42 RIL182_RS00920 intergenic 186938 187460 + down CACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCA ATCAAATTTGATCAATATAGAATGACACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCATGAGCAGGGAAGTGTTAGAGATTCT CACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTT 443 TTerm_0022 NZ_LR027880.1 206828 206845 18 206850 206867 18 4 83 0 21 72 27 73 26 0 206847 AAAGATTGGAAGTGTTGA TCAACACTTCTTATTTTT True ATTAGCTAA GTACATTAA True True + AAAGATTGGAAGTGTTGA AAAA TCAACACTTCTTATTTTT GTACATTAA 58 RIL182_RS01035 intergenic 206820 206897 + down TTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTT CGGGGTTCGAATCCCCGATGTCTCATTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTTTAATTTAGCAAGTATCTTTGGTTGG TTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTT 47 TTerm_0023 NZ_LR027880.1 206828 206845 18 206850 206867 18 4 83 0 21 72 27 73 26 0 206847 AAAGATTGGAAGTGTTGA TCAACACTTCTTATTTTT True ATTAGCTAA GTACATTAA True True + AAAGATTGGAAGTGTTGA AAAA TCAACACTTCTTATTTTT GTACATTAA 58 RIL182_RS01040 intergenic 206820 206897 - down AACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAA CCAACCAAAGATACTTGCTAAATTAAACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAATGAGACATCGGGGATTCGAACCCCG TTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTT 47 TTerm_0024 NZ_LR027880.1 208328 208335 8 208340 208347 8 4 87 0 11 93 6 100 0 0 208337 TTTTTGAA TTTAAAAA True TTTTGTAAT CATTTTGAA False True + TTTTTGAA GTGG TTTAAAAA CATTTTGAA 22 RIL182_RS01045 intergenic 208052 208575 + down GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGT AAAGCAAGTATTCATAAAGAAATAGGATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGTTACAATAACTGCACATGAAACGCTA GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAA 295 TTerm_0025 NZ_LR027880.1 208328 208335 8 208340 208347 8 4 87 0 11 93 6 100 0 0 208337 TTTTTGAA TTTAAAAA True TTTTGTAAT CATTTTGAA False True + TTTTTGAA GTGG TTTAAAAA CATTTTGAA 22 RIL182_RS01050 intergenic 208052 208575 - down ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATC TAGCGTTTCATGTGCAGTTATTGTAACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATCCTATTTCTTTATGAATACTTGCTTT GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAA 295 TTerm_0026 NZ_LR027880.1 208454 208467 14 208473 208486 14 5 78 0 13 82 17 90 9 0 208469 AAAGAAACTGTTTT AAAAAGGTTTATTT True ATGAAAAAA CCTTTTGAC True True + AAAGAAACTGTTTT ATGTG AAAAAGGTTTATTT CCTTTTGAC 34 RIL182_RS01045 intergenic 208052 208575 + down GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGT AAAGCAAGTATTCATAAAGAAATAGGATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGTTACAATAACTGCACATGAAACGCTA GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTT 434 TTerm_0027 NZ_LR027880.1 208454 208467 14 208473 208486 14 5 78 0 13 82 17 90 9 0 208469 AAAGAAACTGTTTT AAAAAGGTTTATTT True ATGAAAAAA CCTTTTGAC True True + AAAGAAACTGTTTT ATGTG AAAAAGGTTTATTT CCTTTTGAC 34 RIL182_RS01050 intergenic 208052 208575 - down ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATC TAGCGTTTCATGTGCAGTTATTGTAACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATCCTATTTCTTTATGAATACTTGCTTT GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTT 434 TTerm_0028 NZ_LR027880.1 227141 227162 22 227167 227189 23 4 91 4 29 57 42 57 42 0 227164 AGCAAAAAATCCGTGCGGATCA TGATCCTGCACGGATTTTTTACT True AGGCTGACA TATTCATGA True True + AGCAAAAAATCCGTGCGGATCA AAAC TGATCCTGCACGGATTTTTTACT TATTCATGA 82 RIL182_RS01110 intergenic 227093 227229 + down AAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACTTATTCATGACAACAGGTTTCCTGTGAGGCGGTCTATTGTT AAATGCAGTGCGCTGTGGAAAATAAAAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACTTATTCATGACAACAGGTTTCCTGTGAGGCGGTCTATTGTTTAGTTCAACATATTTAAGAACTGTG AAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACT 96 TTerm_0029 NZ_LR027880.1 227141 227162 22 227167 227189 23 4 91 4 29 57 42 57 42 0 227164 AGCAAAAAATCCGTGCGGATCA TGATCCTGCACGGATTTTTTACT True AGGCTGACA TATTCATGA True True + AGCAAAAAATCCGTGCGGATCA AAAC TGATCCTGCACGGATTTTTTACT TATTCATGA 82 RIL182_RS01115 intergenic 227093 227229 - down AACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGCTGTCAGCCTTATCTACGCTCCAGATAATCATTATTATGATAAATCTTT CACAGTTCTTAAATATGTTGAACTAAACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGCTGTCAGCCTTATCTACGCTCCAGATAATCATTATTATGATAAATCTTTTTATTTTCCACAGCGCACTGCATTT AAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACT 96 TTerm_0030 NZ_LR027880.1 234439 234452 14 234461 234474 14 8 92 0 23 53 46 53 46 0 234456 AAAGCAGCACTTGA TCGAGTGCTGCTTT True CTGTAGACA TCTGTAACT False True + AAAGCAGCACTTGA TTTAACAC TCGAGTGCTGCTTT TCTGTAACT 70 RIL182_RS01135 intergenic 234083 234544 + down TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAACAGTGTTTTTTGAGTGCTCTC CACGCTGAACCGGATTTCGGACTGATCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAACAGTGTTTTTTGAGTGCTCTCTTGTGGAGCATTTCTGCCAGCTTTT TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTT 391 TTerm_0031 NZ_LR027880.1 234439 234452 14 234461 234474 14 8 92 0 23 53 46 53 46 0 234456 AAAGCAGCACTTGA TCGAGTGCTGCTTT True CTGTAGACA TCTGTAACT False True + AAAGCAGCACTTGA TTTAACAC TCGAGTGCTGCTTT TCTGTAACT 70 RIL182_RS01140 intergenic 234083 234544 - down GAGAGCACTCAAAAAACACTGTTTTTGCATACTTTTCAAAAATATGTGTGATAACAGGACAAGTTACAGAAAAGCAGCACTCGAGTGTTAAATCAAGTGCTGCTTTGTCTACAGTCTGAAAAGAGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCAAACTTCTTCTCCGCGAGGTGCGCATCCCGCCCGGAGGGCTTTTTCATTCATAGGACGTAATTTCCTATGAAGATTCGGGTGTCAAAAGGTGGCTCACAACTTAGCGGCTGGCAAATTGCACAAAGCCGAGGCTGTTTTTGTGACTTTGGGAGAAAAAATGAAAAAAAGCATGTCTGCCCCAGAATATTTATTCTGAAACAAACATGCTTTTTATTCATAAGATTCAAATGTCCGCCAAGCGTCCATCCTTTGATTGAACCAAATCTACAAACTATTTTGATTTAATGAAACGA AAAAGCTGGCAGAAATGCTCCACAAGAGAGCACTCAAAAAACACTGTTTTTGCATACTTTTCAAAAATATGTGTGATAACAGGACAAGTTACAGAAAAGCAGCACTCGAGTGTTAAATCAAGTGCTGCTTTGTCTACAGTCTGAAAAGAGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCAAACTTCTTCTCCGCGAGGTGCGCATCCCGCCCGGAGGGCTTTTTCATTCATAGGACGTAATTTCCTATGAAGATTCGGGTGTCAAAAGGTGGCTCACAACTTAGCGGCTGGCAAATTGCACAAAGCCGAGGCTGTTTTTGTGACTTTGGGAGAAAAAATGAAAAAAAGCATGTCTGCCCCAGAATATTTATTCTGAAACAAACATGCTTTTTATTCATAAGATTCAAATGTCCGCCAAGCGTCCATCCTTTGATTGAACCAAATCTACAAACTATTTTGATTTAATGAAACGATCAGTCCGAAATCCGGTTCAGCGTG TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTT 391 TTerm_0032 NZ_LR027880.1 234503 234508 6 234518 234523 6 9 100 0 12 83 16 83 16 0 234512 TTTTTG CAAAAA True CACACATAT CAGTGTTTT False True + TTTTTG AAAAGTATG CAAAAA CAGTGTTTT 32 RIL182_RS01135 intergenic 234083 234544 + down TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAACAGTGTTTTTTGAGTGCTCTC CACGCTGAACCGGATTTCGGACTGATCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAACAGTGTTTTTTGAGTGCTCTCTTGTGGAGCATTTCTGCCAGCTTTT TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAA 440 TTerm_0033 NZ_LR027880.1 234503 234508 6 234518 234523 6 9 100 0 12 83 16 83 16 0 234512 TTTTTG CAAAAA True CACACATAT CAGTGTTTT False True + TTTTTG AAAAGTATG CAAAAA CAGTGTTTT 32 RIL182_RS01140 intergenic 234083 234544 - down GAGAGCACTCAAAAAACACTGTTTTTGCATACTTTTCAAAAATATGTGTGATAACAGGACAAGTTACAGAAAAGCAGCACTCGAGTGTTAAATCAAGTGCTGCTTTGTCTACAGTCTGAAAAGAGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCAAACTTCTTCTCCGCGAGGTGCGCATCCCGCCCGGAGGGCTTTTTCATTCATAGGACGTAATTTCCTATGAAGATTCGGGTGTCAAAAGGTGGCTCACAACTTAGCGGCTGGCAAATTGCACAAAGCCGAGGCTGTTTTTGTGACTTTGGGAGAAAAAATGAAAAAAAGCATGTCTGCCCCAGAATATTTATTCTGAAACAAACATGCTTTTTATTCATAAGATTCAAATGTCCGCCAAGCGTCCATCCTTTGATTGAACCAAATCTACAAACTATTTTGATTTAATGAAACGA AAAAGCTGGCAGAAATGCTCCACAAGAGAGCACTCAAAAAACACTGTTTTTGCATACTTTTCAAAAATATGTGTGATAACAGGACAAGTTACAGAAAAGCAGCACTCGAGTGTTAAATCAAGTGCTGCTTTGTCTACAGTCTGAAAAGAGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCAAACTTCTTCTCCGCGAGGTGCGCATCCCGCCCGGAGGGCTTTTTCATTCATAGGACGTAATTTCCTATGAAGATTCGGGTGTCAAAAGGTGGCTCACAACTTAGCGGCTGGCAAATTGCACAAAGCCGAGGCTGTTTTTGTGACTTTGGGAGAAAAAATGAAAAAAAGCATGTCTGCCCCAGAATATTTATTCTGAAACAAACATGCTTTTTATTCATAAGATTCAAATGTCCGCCAAGCGTCCATCCTTTGATTGAACCAAATCTACAAACTATTTTGATTTAATGAAACGATCAGTCCGAAATCCGGTTCAGCGTG TCGTTTCATTAAATCAAAATAGTTTGTAGATTTGGTTCAATCAAAGGATGGACGCTTGGCGGACATTTGAATCTTATGAATAAAAAGCATGTTTGTTTCAGAATAAATATTCTGGGGCAGACATGCTTTTTTTCATTTTTTCTCCCAAAGTCACAAAAACAGCCTCGGCTTTGTGCAATTTGCCAGCCGCTAAGTTGTGAGCCACCTTTTGACACCCGAATCTTCATAGGAAATTACGTCCTATGAATGAAAAAGCCCTCCGGGCGGGATGCGCACCTCGCGGAGAAGAAGTTTGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTTCAGACTGTAGACAAAGCAGCACTTGATTTAACACTCGAGTGCTGCTTTTCTGTAACTTGTCCTGTTATCACACATATTTTTGAAAAGTATGCAAAAA 440 TTerm_0034 NZ_LR027880.1 241175 241182 8 241191 241198 8 8 100 0 16 62 37 62 37 0 241186 GATACACT AGTGTATC True TTATTTGTG GTGAATTTT False True + GATACACT GGAACAAG AGTGTATC GTGAATTTT 48 RIL182_RS01165 intergenic 241121 241228 + down AATTGATCTGGACAGATTTCCAGCATAATTTCTAGCTATTCCCCTTTATTTGTGATACACTGGAACAAGAGTGTATCGTGAATTTTTACAGAGAGGATAAAAAGCTA GAAAGCCGGGTTGAAGTGTTGTTAAAATTGATCTGGACAGATTTCCAGCATAATTTCTAGCTATTCCCCTTTATTTGTGATACACTGGAACAAGAGTGTATCGTGAATTTTTACAGAGAGGATAAAAAGCTATGCAGGATTATGATGAGAGTTTTTT AATTGATCTGGACAGATTTCCAGCATAATTTCTAGCTATTCCCCTTTATTTGTGATACACTGGAACAAGAGTGTATC 77 TTerm_0035 NZ_LR027880.1 246686 246700 15 246708 246722 15 7 86 0 20 53 46 53 46 0 246703 CATCTGATTTTTCCG CGGAGAAAGCAGATG True CAGAAGTGC TTTTTTTTC False True + CATCTGATTTTTCCG CATCAAA CGGAGAAAGCAGATG TTTTTTTTC 72 RIL182_RS01195 intergenic 246664 246886 + down TACCTGCTTCTGACAGAAGTGCATCTGATTTTTCCGCATCAAACGGAGAAAGCAGATGTTTTTTTTCGTTGGGAACATGGTGAGCAGTAATTTTCCGTTGCGTGTAAGTCTTGTCTTTACAAATACACAACAAAATGATATATTCGATTTGGATATGATATATTAATAAATATAAATAATATGTAAATGATATATAAATGACATATAAAAAGGAGGAAAAAA GATATTGGAAGAGGCAGGGAAATAGTACCTGCTTCTGACAGAAGTGCATCTGATTTTTCCGCATCAAACGGAGAAAGCAGATGTTTTTTTTCGTTGGGAACATGGTGAGCAGTAATTTTCCGTTGCGTGTAAGTCTTGTCTTTACAAATACACAACAAAATGATATATTCGATTTGGATATGATATATTAATAAATATAAATAATATGTAAATGATATATAAATGACATATAAAAAGGAGGAAAAAATGAAACTGGGGATCGATATGGGCGG TACCTGCTTCTGACAGAAGTGCATCTGATTTTTCCGCATCAAACGGAGAAAGCAGATG 58 TTerm_0036 NZ_LR027880.1 256235 256250 16 256259 256274 16 8 75 0 12 84 15 91 8 0 256254 TTATTTAAACATAACA TGTTAACTTTTGATAA True TGCTTAATT CATTGCTAT False True + TTATTTAAACATAACA AACAACTC TGTTAACTTTTGATAA CATTGCTAT 32 RIL182_RS01225 intergenic 256027 256311 - down ACCTTTCAAATTCTGTTCATCATCTTTCATAGCAATGTTATCAAAAGTTAACAGAGTTGTTTGTTATGTTTAAATAAATTAAGCAGATAGCTCAAAAATTTAAACTTATATTTGTGAACTATAGAGAAAAAGCACAAAATACAACATAAAAAGTTGACATTGATAACAAAAACGGATAACTTTATGATAACATATTATTAACAAATGATAAGGCGAGTTAAAAAATATGTTTAAGAAGTAACACTATGAAAAGACGGTGGGAGAAAAAAGAAAGGAAATGTTTT TGTACCGGGATTCTATCGTAGACTGACCTTTCAAATTCTGTTCATCATCTTTCATAGCAATGTTATCAAAAGTTAACAGAGTTGTTTGTTATGTTTAAATAAATTAAGCAGATAGCTCAAAAATTTAAACTTATATTTGTGAACTATAGAGAAAAAGCACAAAATACAACATAAAAAGTTGACATTGATAACAAAAACGGATAACTTTATGATAACATATTATTAACAAATGATAAGGCGAGTTAAAAAATATGTTTAAGAAGTAACACTATGAAAAGACGGTGGGAGAAAAAAGAAAGGAAATGTTTTATGAAAAACAAAGTTTTAGGAAGAA AAAACATTTCCTTTCTTTTTTCTCCCACCGTCTTTTCATAGTGTTACTTCTTAAACATATTTTTTAACTCGCCTTATCATTTGTTAATAATATGTTATCATAAAGTTATCCGTTTTTGTTATCAATGTCAACTTTTTATGTTGTATTTTGTGCTTTTTCTCTATAGTTCACAAATATAAGTTTAAATTTTTGAGCTATCTGCTTAATTTATTTAAACATAACAAACAACTCTGTTAACTTTTGATAA 247 TTerm_0037 NZ_LR027880.1 262079 262104 26 262109 262133 25 4 84 3 25 74 25 77 22 0 262106 AAAAACGGAGTTGTTACAAAATAATA TATTATTTGTGACAGCTCTGTTTTT True ATGTAATAA GCAAAAAAT True True + AAAAACGGAGTTGTTACAAAATAATA ATAA TATTATTTGTGACAGCTCTGTTTTT GCAAAAAAT 50 RIL182_RS01245 intergenic 262076 262295 + down TAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTTGCAAAAAATTTCTGGAAACAACAGTGGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGGCCTCT AATGGAAAGCATGGAAAGTATGTAATAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTTGCAAAAAATTTCTGGAAACAACAGTGGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGGCCTCTTATTCGAGGTTGAATTCTACTTCGC TAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTT 57 TTerm_0038 NZ_LR027880.1 262079 262104 26 262109 262133 25 4 84 3 25 74 25 77 22 0 262106 AAAAACGGAGTTGTTACAAAATAATA TATTATTTGTGACAGCTCTGTTTTT True ATGTAATAA GCAAAAAAT True True + AAAAACGGAGTTGTTACAAAATAATA ATAA TATTATTTGTGACAGCTCTGTTTTT GCAAAAAAT 50 RIL182_RS01250 intergenic 262076 262295 - down AGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTTTTA GCGAAGTAGAATTCAACCTCGAATAAGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTTTTATTACATACTTTCCATGCTTTCCATT TAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTT 57 TTerm_0039 NZ_LR027880.1 285623 285650 28 285657 285684 28 6 82 0 31 69 30 73 26 0 285653 AAAACTAAAAAAACAGTCGTACCGCTTT AAAACGGTATGGCTGTTTTTTTGATTTT True AAACTAAAA ATGCTTCTA True True + AAAACTAAAAAAACAGTCGTACCGCTTT GAAATA AAAACGGTATGGCTGTTTTTTTGATTTT ATGCTTCTA 78 RIL182_RS01310 intergenic 285596 285683 + down TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTT ATGCGTACAGATGCTGTTGGATTAATACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTTTATGCTTCTACTGCATTCTGTTTTA TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTTT 88 TTerm_0040 NZ_LR027880.1 285623 285650 28 285657 285684 28 6 82 0 31 69 30 73 26 0 285653 AAAACTAAAAAAACAGTCGTACCGCTTT AAAACGGTATGGCTGTTTTTTTGATTTT True AAACTAAAA ATGCTTCTA True True + AAAACTAAAAAAACAGTCGTACCGCTTT GAAATA AAAACGGTATGGCTGTTTTTTTGATTTT ATGCTTCTA 78 RIL182_RS01315 intergenic 285596 285683 - down AAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTA TAAAACAGAATGCAGTAGAAGCATAAAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTATTAATCCAACAGCATCTGTACGCAT TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTTT 88 TTerm_0041 NZ_LR027880.1 285656 285661 6 285671 285676 6 9 100 0 12 83 16 83 16 0 285665 AAAAAC GTTTTT True TTTGAAATA TTGATTTTA False True + AAAAAC GGTATGGCT GTTTTT TTGATTTTA 32 RIL182_RS01310 intergenic 285596 285683 + down TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTT ATGCGTACAGATGCTGTTGGATTAATACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTTTATGCTTCTACTGCATTCTGTTTTA TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTT 80 TTerm_0042 NZ_LR027880.1 285656 285661 6 285671 285676 6 9 100 0 12 83 16 83 16 0 285665 AAAAAC GTTTTT True TTTGAAATA TTGATTTTA False True + AAAAAC GGTATGGCT GTTTTT TTGATTTTA 32 RIL182_RS01315 intergenic 285596 285683 - down AAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTA TAAAACAGAATGCAGTAGAAGCATAAAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTATTAATCCAACAGCATCTGTACGCAT TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTT 80 TTerm_0043 NZ_LR027880.1 301731 301748 18 301753 301771 19 4 94 5 26 75 24 77 22 0 301750 AAATAATCCCCAAAAATT AATTTTTCGGGGATTATTT True ATAATGTTA TTGGCTTAT False True + AAATAATCCCCAAAAATT CTAA AATTTTTCGGGGATTATTT TTGGCTTAT 52 RIL182_RS01400 intergenic 301726 301844 + down TGTTAAATAATCCCCAAAAATTCTAAAATTTTTCGGGGATTATTTTTGGCTTATATTTATTATTCAATTTAACTGATAATGATTCTCATATGAGATTTATCTTTAGAAATCATATCAT TGCAGAGGACACTCTTTATTTATAATGTTAAATAATCCCCAAAAATTCTAAAATTTTTCGGGGATTATTTTTGGCTTATATTTATTATTCAATTTAACTGATAATGATTCTCATATGAGATTTATCTTTAGAAATCATATCATCAATCACGCCAGTCTGCATCTGATT TGTTAAATAATCCCCAAAAATTCTAAAATTTTTCGGGGATTATTT 45 TTerm_0044 NZ_LR027880.1 301731 301748 18 301753 301771 19 4 94 5 26 75 24 77 22 0 301750 AAATAATCCCCAAAAATT AATTTTTCGGGGATTATTT True ATAATGTTA TTGGCTTAT False True + AAATAATCCCCAAAAATT CTAA AATTTTTCGGGGATTATTT TTGGCTTAT 52 RIL182_RS01405 intergenic 301726 301844 - down ATGATATGATTTCTAAAGATAAATCTCATATGAGAATCATTATCAGTTAAATTGAATAATAAATATAAGCCAAAAATAATCCCCGAAAAATTTTAGAATTTTTGGGGATTATTTAACA AATCAGATGCAGACTGGCGTGATTGATGATATGATTTCTAAAGATAAATCTCATATGAGAATCATTATCAGTTAAATTGAATAATAAATATAAGCCAAAAATAATCCCCGAAAAATTTTAGAATTTTTGGGGATTATTTAACATTATAAATAAAGAGTGTCCTCTGCA TGTTAAATAATCCCCAAAAATTCTAAAATTTTTCGGGGATTATTT 45 TTerm_0045 NZ_LR027880.1 304839 304848 10 304855 304864 10 6 80 0 10 90 10 100 0 0 304851 ATATGCAAAT ATTTATATAT True AGTATTCTA TTTATCTAT False True + ATATGCAAAT GGATAG ATTTATATAT TTTATCTAT 20 RIL182_RS01415 intergenic 304709 304886 + down TTTCTACTTTCTGTAATCATACAATATTTGGAGATGATGTTGTTTTTCGTTATATTATCTGTATCAATTATGCTGACAATATACTATTTATGCATCATATTTACAATGTTCAAAAGATAAAAGTATTCTATATGCAAATGGATAGATTTATATATTTTATCTATCTGTTTGCAATTT GAGGAAAACAGAGGAAATTTCTTAATTTCTACTTTCTGTAATCATACAATATTTGGAGATGATGTTGTTTTTCGTTATATTATCTGTATCAATTATGCTGACAATATACTATTTATGCATCATATTTACAATGTTCAAAAGATAAAAGTATTCTATATGCAAATGGATAGATTTATATATTTTATCTATCTGTTTGCAATTTTAATAATAACTCCTTGTATCCCGCC TTTCTACTTTCTGTAATCATACAATATTTGGAGATGATGTTGTTTTTCGTTATATTATCTGTATCAATTATGCTGACAATATACTATTTATGCATCATATTTACAATGTTCAAAAGATAAAAGTATTCTATATGCAAATGGATAGATTTATATAT 155 TTerm_0046 NZ_LR027880.1 304839 304848 10 304855 304864 10 6 80 0 10 90 10 100 0 0 304851 ATATGCAAAT ATTTATATAT True AGTATTCTA TTTATCTAT False True + ATATGCAAAT GGATAG ATTTATATAT TTTATCTAT 20 RIL182_RS01420 intergenic 304709 304886 - down AAATTGCAAACAGATAGATAAAATATATAAATCTATCCATTTGCATATAGAATACTTTTATCTTTTGAACATTGTAAATATGATGCATAAATAGTATATTGTCAGCATAATTGATACAGATAATATAACGAAAAACAACATCATCTCCAAATATTGTATGATTACAGAAAGTAGAAA GGCGGGATACAAGGAGTTATTATTAAAATTGCAAACAGATAGATAAAATATATAAATCTATCCATTTGCATATAGAATACTTTTATCTTTTGAACATTGTAAATATGATGCATAAATAGTATATTGTCAGCATAATTGATACAGATAATATAACGAAAAACAACATCATCTCCAAATATTGTATGATTACAGAAAGTAGAAATTAAGAAATTTCCTCTGTTTTCCTC TTTCTACTTTCTGTAATCATACAATATTTGGAGATGATGTTGTTTTTCGTTATATTATCTGTATCAATTATGCTGACAATATACTATTTATGCATCATATTTACAATGTTCAAAAGATAAAAGTATTCTATATGCAAATGGATAGATTTATATAT 155 TTerm_0047 NZ_LR027880.1 311235 311241 7 311246 311252 7 4 100 0 14 71 28 71 28 0 311243 AGGTATA TATACCT True GAAAGGTAA GTTTTATGT False True + AGGTATA AATG TATACCT GTTTTATGT 44 RIL182_RS01465 intergenic 311242 311445 + down ATGTATACCTGTTTTATGTGGAAATTGGAAACAGGTAACAGGAAATTTACTTATAGCAGAGGGTGAAAATTTTGTTGAGGCACTACGTTCAGGAGCTTTTTTAACGTGCATATATGGAGGAAAAATAACGATAATAGGGATAAAAGAGGGGGAAAAACCAGAGCCAGAAGAACTTCTTTGGATACCATCCAATATATTGCAGT TCTGGAACGGAAAGGTAAGGTATAAATGTATACCTGTTTTATGTGGAAATTGGAAACAGGTAACAGGAAATTTACTTATAGCAGAGGGTGAAAATTTTGTTGAGGCACTACGTTCAGGAGCTTTTTTAACGTGCATATATGGAGGAAAAATAACGATAATAGGGATAAAAGAGGGGGAAAAACCAGAGCCAGAAGAACTTCTTTGGATACCATCCAATATATTGCAGTTGACAGGGAAAACGGAGGCAGAAAA ATGTATACCT 10 TTerm_0048 NZ_LR027880.1 328149 328162 14 328167 328180 14 4 85 0 18 42 57 41 58 0 328164 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS01585 intergenic 328150 328200 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGA ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACAGAGTATCCG AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0049 NZ_LR027880.1 328423 328436 14 328441 328454 14 4 85 0 18 42 57 41 58 0 328438 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS01590 intergenic 328424 328489 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTAC ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGTTCCACAGTCCGGACAATAGCGGT AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0050 NZ_LR027880.1 328423 328436 14 328441 328454 14 4 85 0 18 42 57 41 58 0 328438 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS01595 intergenic 328424 328489 - down GTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATT ACCGCTATTGTCCGGACTGTGGAACGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAAT AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0051 NZ_LR027880.1 331058 331071 14 331076 331089 14 4 85 0 18 42 57 41 58 0 331073 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS01610 intergenic 331059 331431 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTTTAAAAAGAAAAATATAATAATTTGTAAACGAGTGGCAGACTAGCGTAAATCCAGTTTTGCTGCTCGTTTTTTTGTGCGCATGCTGTCGCACATTATGAAAATATATAACGCATTTTAAAGTGTGTAGCTTATCAGCGTAAGTCCAGCTTATGAGGTAAGTACACACTTTTTTTATGCAGAACAAGGAGGCTAAATCCTCTCCTCACCAAAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGCTAAATCCTCTCCTCGCCAAGGGGCTCGGATTTTGCTTCGCAAAACAAGGAGGATTATAAAA ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTTTAAAAAGAAAAATATAATAATTTGTAAACGAGTGGCAGACTAGCGTAAATCCAGTTTTGCTGCTCGTTTTTTTGTGCGCATGCTGTCGCACATTATGAAAATATATAACGCATTTTAAAGTGTGTAGCTTATCAGCGTAAGTCCAGCTTATGAGGTAAGTACACACTTTTTTTATGCAGAACAAGGAGGCTAAATCCTCTCCTCACCAAAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGCTAAATCCTCTCCTCGCCAAGGGGCTCGGATTTTGCTTCGCAAAACAAGGAGGATTATAAAATGGCAGAAAGTAACAAGATGAAGGA AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0052 NZ_LR027880.1 340393 340416 24 340422 340445 24 5 70 0 13 81 18 88 11 0 340418 AAAAAAAGTGTAAAAGGAGAAAAA TTTTACACTTTTTTGATTTCTTTT True CATAGACGA AATGGAAAT True True + AAAAAAAGTGTAAAAGGAGAAAAA AATTC TTTTACACTTTTTTGATTTCTTTT AATGGAAAT 34 RIL182_RS01675 intergenic 340367 340501 + down AACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTTAATGGAAATTCCAGTTCTTTAAACAATAAAATCTGTTGCAGCCGTTCTTTTCAGGT AGAAGAGCTTGTGATCGAAGCGTAAAACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTTAATGGAAATTCCAGTTCTTTAAACAATAAAATCTGTTGCAGCCGTTCTTTTCAGGTCATATCCGAAGACCCATTAAAATAT AACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTT 78 TTerm_0053 NZ_LR027880.1 340393 340416 24 340422 340445 24 5 70 0 13 81 18 88 11 0 340418 AAAAAAAGTGTAAAAGGAGAAAAA TTTTACACTTTTTTGATTTCTTTT True CATAGACGA AATGGAAAT True True + AAAAAAAGTGTAAAAGGAGAAAAA AATTC TTTTACACTTTTTTGATTTCTTTT AATGGAAAT 34 RIL182_RS21535 intergenic 340367 340501 - down ACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTTTCGTCTATGATTTTATTTTTAAAGTT ATATTTTAATGGGTCTTCGGATATGACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTTTCGTCTATGATTTTATTTTTAAAGTTTTACGCTTCGATCACAAGCTCTTCT AACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTT 78 TTerm_0054 NZ_LR027880.1 354971 354983 13 354991 355003 13 7 92 0 21 50 50 50 50 0 354986 AAAATGCAGGTGC GCGCCTGCATTTT True AAAAGTTTA TTAATGCCA True True + AAAATGCAGGTGC AGATGGG GCGCCTGCATTTT TTAATGCCA 82 RIL182_RS01770 intergenic 354957 355077 + down AAAATAAAAGTTTAAAATGCAGGTGCAGATGGGGCGCCTGCATTTTTTAATGCCAGATGATTGTTCATCAAAACGGACTGTGTTATAGTAATAAAAAATATCACAAGGGGGGAATTCGGG AATTATTATTTATCGGTTTTTATAAAAAATAAAAGTTTAAAATGCAGGTGCAGATGGGGCGCCTGCATTTTTTAATGCCAGATGATTGTTCATCAAAACGGACTGTGTTATAGTAATAAAAAATATCACAAGGGGGGAATTCGGGTGAAAAAATTATTATTAAAGAATGC AAAATAAAAGTTTAAAATGCAGGTGCAGATGGGGCGCCTGCATTTT 46 TTerm_0055 NZ_LR027880.1 359406 359411 6 359421 359426 6 9 100 0 12 66 33 66 33 0 359415 CGTAAA TTTACG True CTCCATTAC GTCATTTTA False True + CGTAAA AAAGTTCAC TTTACG GTCATTTTA 40 RIL182_RS01795 intergenic 359327 359556 + down TATCTGTTTTTAGTAGTGTTGCTAATGTGGAATGCATTGATAAGAATAGAACTTTATGCGGATTTTAAATCTCCATTACGTAAAAAAGTTCACTTTACGGTCATTTTACGGATAAGGGTATAATATTAAAATAGAAAGCTGTAAAATTCCACGTTGAATTTTACAGCTTTCTTGCGTATAATATATATGTAAATGAAGAAGCTATATCAAGGAAAGGAAGTTGATTTTG TGCAGGTATAGCAGAGAGTTTGTAATATCTGTTTTTAGTAGTGTTGCTAATGTGGAATGCATTGATAAGAATAGAACTTTATGCGGATTTTAAATCTCCATTACGTAAAAAAGTTCACTTTACGGTCATTTTACGGATAAGGGTATAATATTAAAATAGAAAGCTGTAAAATTCCACGTTGAATTTTACAGCTTTCTTGCGTATAATATATATGTAAATGAAGAAGCTATATCAAGGAAAGGAAGTTGATTTTGTGCCGAATATATTACCTGTATCAGA TATCTGTTTTTAGTAGTGTTGCTAATGTGGAATGCATTGATAAGAATAGAACTTTATGCGGATTTTAAATCTCCATTACGTAAAAAAGTTCACTTTACG 99 TTerm_0056 NZ_LR027880.1 361655 361672 18 361677 361694 18 4 88 0 26 61 38 56 43 0 361674 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True + AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTCTTATGC 68 RIL182_RS01810 intergenic 361596 361698 + down AGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTTTTCT TGTCTGCGTGTTGATTAGACAATAAAGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTTTTCTTATGCAAATATTTCTGCAATCTCGC AGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTT 98 TTerm_0057 NZ_LR027880.1 361655 361672 18 361677 361694 18 4 88 0 26 61 38 56 43 0 361674 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True + AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTCTTATGC 68 RIL182_RS01815 intergenic 361596 361698 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCTTAGTTCAATCTCTCATCCCACTCT GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCTTAGTTCAATCTCTCATCCCACTCTTTATTGTCTAATCAACACGCAGACA AGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTT 98 TTerm_0058 NZ_LR027880.1 363901 363906 6 363913 363918 6 6 100 0 12 50 50 50 50 0 363909 AAGCCT AGGCTT True GTACCACAA ATTTTTTTG False True + AAGCCT TGAAAT AGGCTT ATTTTTTTG 48 RIL182_RS01820 intergenic 363881 363998 + down AATCCAAAAAAGTACCACAAAGCCTTGAAATAGGCTTATTTTTTTGTCAAATTTTTATTTTTATTATATAGTAATATTTGGTGATATGTGGTATAATAGTGACAGAGGTGATTATTG ATGTCACGGGAGTTTGACACATTGAAATCCAAAAAAGTACCACAAAGCCTTGAAATAGGCTTATTTTTTTGTCAAATTTTTATTTTTATTATATAGTAATATTTGGTGATATGTGGTATAATAGTGACAGAGGTGATTATTGTGCGTATAACAACATCAAAATCAAA AATCCAAAAAAGTACCACAAAGCCTTGAAATAGGCTT 37 TTerm_0059 NZ_LR027880.1 383863 383880 18 383886 383902 17 5 94 5 24 60 40 58 41 0 383882 TCTCTGTATGACAAAACC GGTTTTGCATACAGAGA True ATTTTGCGT TTTTTTGTA False True + TCTCTGTATGACAAAACC ACACA GGTTTTGCATACAGAGA TTTTTTGTA 64 RIL182_RS01915 intergenic 383504 384025 + down AATATAGAAGATTAAAATAAATCAATAAAATTGATAAAATCACACCTTGCGGAACTCGAAAAAGGTATGTTATTATGTAGAACAGAAAATGAAATGCAATGAAAAGGAATAGTAACAGCGGAATGGAAATCAGAGAACTGCCGGAAGGTGCGAGGCAGTCAGAGTGAAGTTGTGAACTCGCCTTGGAGCTGCCGGCTGAAGGAATCGGATGCATTATGAATGAGCAGATGATACTGGGTAGGCTTGGACGGATCGCCCGCCGTAAGAGGGAAAAGGCATGATAGTGCCGGATGAGTGCATGCATGACGATACAGGTCATTCATGAAACAGAGTGGTACCGCGTGAAGAAAATTTTGCGTCTCTGTATGACAAAACCACACAGGTTTTGCATACAGAGATTTTTTGTATCATGAGAAATTATTATGACATTTTTTCTTACACAAAAAGCTCTCCGGACAGAAAACAGAAAGTGACACACAGAAAATAGAATCATTGTTAAAACAGGATAAGGAGAATGAATA AGATTATGAAGATTTTCAGTTTTAAAATATAGAAGATTAAAATAAATCAATAAAATTGATAAAATCACACCTTGCGGAACTCGAAAAAGGTATGTTATTATGTAGAACAGAAAATGAAATGCAATGAAAAGGAATAGTAACAGCGGAATGGAAATCAGAGAACTGCCGGAAGGTGCGAGGCAGTCAGAGTGAAGTTGTGAACTCGCCTTGGAGCTGCCGGCTGAAGGAATCGGATGCATTATGAATGAGCAGATGATACTGGGTAGGCTTGGACGGATCGCCCGCCGTAAGAGGGAAAAGGCATGATAGTGCCGGATGAGTGCATGCATGACGATACAGGTCATTCATGAAACAGAGTGGTACCGCGTGAAGAAAATTTTGCGTCTCTGTATGACAAAACCACACAGGTTTTGCATACAGAGATTTTTTGTATCATGAGAAATTATTATGACATTTTTTCTTACACAAAAAGCTCTCCGGACAGAAAACAGAAAGTGACACACAGAAAATAGAATCATTGTTAAAACAGGATAAGGAGAATGAATATGAATTTTGATGTTGCAGAAAAATA AATATAGAAGATTAAAATAAATCAATAAAATTGATAAAATCACACCTTGCGGAACTCGAAAAAGGTATGTTATTATGTAGAACAGAAAATGAAATGCAATGAAAAGGAATAGTAACAGCGGAATGGAAATCAGAGAACTGCCGGAAGGTGCGAGGCAGTCAGAGTGAAGTTGTGAACTCGCCTTGGAGCTGCCGGCTGAAGGAATCGGATGCATTATGAATGAGCAGATGATACTGGGTAGGCTTGGACGGATCGCCCGCCGTAAGAGGGAAAAGGCATGATAGTGCCGGATGAGTGCATGCATGACGATACAGGTCATTCATGAAACAGAGTGGTACCGCGTGAAGAAAATTTTGCGTCTCTGTATGACAAAACCACACAGGTTTTGCATACAGAGA 398 TTerm_0060 NZ_LR027880.1 386026 386048 23 386054 386077 24 5 91 4 31 55 44 54 45 0 386050 AAAAACAAGAGGTGCTTCCGGAA TTCCGGTGAGCACCTCTTGTTTTT True ATAAATAAA GTGATAACA True True + AAAAACAAGAGGTGCTTCCGGAA ATCTG TTCCGGTGAGCACCTCTTGTTTTT GTGATAACA 94 RIL182_RS01920 intergenic 386025 386160 + down AAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTTGTGATAACAGATCTGTTTAAAATATGCACAGATTGTTGTTTGTGAAAATGATGTACTAATATATAGATGTATATATATCAGGT ACAGTTCCGCAGACAGTATAAATAAAAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTTGTGATAACAGATCTGTTTAAAATATGCACAGATTGTTGTTTGTGAAAATGATGTACTAATATATAGATGTATATATATCAGGTTATTTAATATGTTTTTTGATCGCAT AAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTT 52 TTerm_0061 NZ_LR027880.1 386026 386048 23 386054 386077 24 5 91 4 31 55 44 54 45 0 386050 AAAAACAAGAGGTGCTTCCGGAA TTCCGGTGAGCACCTCTTGTTTTT True ATAAATAAA GTGATAACA True True + AAAAACAAGAGGTGCTTCCGGAA ATCTG TTCCGGTGAGCACCTCTTGTTTTT GTGATAACA 94 RIL182_RS01925 intergenic 386025 386160 - down ACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTTT ATGCGATCAAAAAACATATTAAATAACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTTTTTATTTATACTGTCTGCGGAACTGT AAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTT 52 TTerm_0062 NZ_LR027880.1 393731 393743 13 393752 393764 13 8 92 0 21 65 34 66 33 0 393747 AAAAAGTGTCACA TGTGGCACTTTTT True AACAGGCAA ATTTTGTGG True True + AAAAAGTGTCACA TCGTATGG TGTGGCACTTTTT ATTTTGTGG 74 RIL182_RS01955 intergenic 393666 393854 + down AGAAAGCGTATCGCCTGAAAAACAGGTAATAGCCTTAAAAATAAATCATAGACAAAAACAGGCAAAAAAGTGTCACATCGTATGGTGTGGCACTTTTTATTTTGTGGCAAGTGTGCTAAAATTACATTTAATACATTATAATCTTTTAACATAAAAGAAATCATTATGGCATAAAGTGAGGACACAGA CTCCACAGCATTATTCGCAGACTAAAGAAAGCGTATCGCCTGAAAAACAGGTAATAGCCTTAAAAATAAATCATAGACAAAAACAGGCAAAAAAGTGTCACATCGTATGGTGTGGCACTTTTTATTTTGTGGCAAGTGTGCTAAAATTACATTTAATACATTATAATCTTTTAACATAAAAGAAATCATTATGGCATAAAGTGAGGACACAGATGGAAGCGAAAAGACAGGATATCGG AGAAAGCGTATCGCCTGAAAAACAGGTAATAGCCTTAAAAATAAATCATAGACAAAAACAGGCAAAAAAGTGTCACATCGTATGGTGTGGCACTTTTT 98 TTerm_0063 NZ_LR027880.1 402480 402489 10 402494 402503 10 4 100 0 20 70 30 70 30 0 402491 CTCTGAAATA TATTTCAGAG True ATACATGGC TCTTTTTAT False True + CTCTGAAATA GTTT TATTTCAGAG TCTTTTTAT 48 RIL182_RS01980 intergenic 402241 402785 + down AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCA TGGACTTATTTATATGCTGCAGTAAAATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCATGCAGCAGGAAAGATATATGCGCCG AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAG 262 TTerm_0064 NZ_LR027880.1 402630 402636 7 402643 402649 7 6 100 0 14 85 14 85 14 0 402639 ATTTTAG CTAAAAT True AATATGTCA CCGGTTTTA False True + ATTTTAG AAATCC CTAAAAT CCGGTTTTA 36 RIL182_RS01980 intergenic 402241 402785 + down AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCA TGGACTTATTTATATGCTGCAGTAAAATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCATGCAGCAGGAAAGATATATGCGCCG AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAAT 408 TTerm_0065 NZ_LR027880.1 402658 402671 14 402678 402691 14 6 100 0 28 57 42 57 42 0 402674 AAGAAGCTCTGAAC GTTCAGAGCTTCTT True CCGGTTTTA TTTATGGCA False True + AAGAAGCTCTGAAC GATCGT GTTCAGAGCTTCTT TTTATGGCA 80 RIL182_RS01980 intergenic 402241 402785 + down AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCA TGGACTTATTTATATGCTGCAGTAAAATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCATGCAGCAGGAAAGATATATGCGCCG AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTT 450 TTerm_0066 NZ_LR027880.1 409122 409135 14 409144 409157 14 8 85 0 18 82 17 83 16 0 409139 TTGATTCCATTTTA TATAATGTAATCAA True CCGATTTAT AATTATTTT False True + TTGATTCCATTTTA ACACAGGA TATAATGTAATCAA AATTATTTT 36 RIL182_RS02020 intergenic 409095 409240 - down GCTTTATTAAAAAATCAAAATAACAGACAAGTCCGATATGTGGCAAGATGCTGCTATTGGGCTTGTTTTTTTGTAAAATAATTTTGATTACATTATATCCTGTGTTAAAATGGAATCAATAAATCGGAGTTTCAGGAGGAAAATC ATATCTCTGACACACTTGGCAGATAGCTTTATTAAAAAATCAAAATAACAGACAAGTCCGATATGTGGCAAGATGCTGCTATTGGGCTTGTTTTTTTGTAAAATAATTTTGATTACATTATATCCTGTGTTAAAATGGAATCAATAAATCGGAGTTTCAGGAGGAAAATCATGAGCAGTAGGGGAATTTTTATTT GATTTTCCTCCTGAAACTCCGATTTATTGATTCCATTTTAACACAGGATATAATGTAATCAA 62 TTerm_0067 NZ_LR027880.1 415117 415124 8 415134 415141 8 9 87 0 11 93 6 100 0 0 415128 AACTTATT AATAATTT True TGAAGATGA TTTGGAGGC False True + AACTTATT TTTGAGTGC AATAATTT TTTGGAGGC 22 RIL182_RS02040 intergenic 415063 415157 + down GATTTGAAGAAAAAAGCTGCATGGACAGGCAGGATTGCGTATCTGTGAAGATGAACTTATTTTTGAGTGCAATAATTTTTTGGAGGCGTGCAGA TGTGAGGGAGATCGCGGCGGGATAAGATTTGAAGAAAAAAGCTGCATGGACAGGCAGGATTGCGTATCTGTGAAGATGAACTTATTTTTGAGTGCAATAATTTTTTGGAGGCGTGCAGATGGAACAGCAGAAAGACGAAAAAAT GATTTGAAGAAAAAAGCTGCATGGACAGGCAGGATTGCGTATCTGTGAAGATGAACTTATTTTTGAGTGCAATAATTT 78 TTerm_0068 NZ_LR027880.1 425440 425455 16 425462 425478 17 6 88 5 17 57 42 60 40 0 425458 AAAAGAACAGGTTTCC GGAAACGCTGTCCTTTT True GTAAAATAA CTATGCTAT True True + AAAAGAACAGGTTTCC TGAGGT GGAAACGCTGTCCTTTT CTATGCTAT 58 RIL182_RS02095 intergenic 425435 425602 + down AATAAAAAGAACAGGTTTCCTGAGGTGGAAACGCTGTCCTTTTCTATGCTATAAATGTGTGTGTGTATATAGCAATTAAAATGTATCATGGATTTGATATAACTTCAAATAGGATAAAATTATAGAAAACATAAGTAAATACTTATGAGAGAAACGGAGATATGATA TGATACGAACACGCTGTTGCTGTAAAATAAAAAGAACAGGTTTCCTGAGGTGGAAACGCTGTCCTTTTCTATGCTATAAATGTGTGTGTGTATATAGCAATTAAAATGTATCATGGATTTGATATAACTTCAAATAGGATAAAATTATAGAAAACATAAGTAAATACTTATGAGAGAAACGGAGATATGATATGAACCTGTTAGACATCATCGGACC AATAAAAAGAACAGGTTTCCTGAGGTGGAAACGCTGTCCTTTT 43 TTerm_0069 NZ_LR027880.1 430348 430364 17 430374 430390 17 9 94 0 29 50 50 50 50 0 430368 AAGAAAAGGCAGAGCCG CGGTTCTGCCTTTTCTT True TAAAATATA TATGCATAA True True + AAGAAAAGGCAGAGCCG GGGATGAAG CGGTTCTGCCTTTTCTT TATGCATAA 90 RIL182_RS02125 intergenic 430214 430426 + down GAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTTTATGCATAATTTATGCATGCATAGATTATGTGCAAT GAAAAAACAGAGTGTAACGGTGTGAGAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTTTATGCATAATTTATGCATGCATAGATTATGTGCAATTAGTATTTGTTGCTGCGTCTCCAGA GAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTT 176 TTerm_0070 NZ_LR027880.1 430348 430364 17 430374 430390 17 9 94 0 29 50 50 50 50 0 430368 AAGAAAAGGCAGAGCCG CGGTTCTGCCTTTTCTT True TAAAATATA TATGCATAA True True + AAGAAAAGGCAGAGCCG GGGATGAAG CGGTTCTGCCTTTTCTT TATGCATAA 90 RIL182_RS02130 intergenic 430214 430426 - down ATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCTTATATTTTATACTCATTTTTTCACACAGTCCAGCTTTTTGCTATCTTTCCATCTCTGGCATTCCCTATACTGTTGCTTTCTATTTTTCACACCGGCATTTCACCCATTCTGTTATCTTTCCAGTTCTGACATTC TCTGGAGACGCAGCAACAAATACTAATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCTTATATTTTATACTCATTTTTTCACACAGTCCAGCTTTTTGCTATCTTTCCATCTCTGGCATTCCCTATACTGTTGCTTTCTATTTTTCACACCGGCATTTCACCCATTCTGTTATCTTTCCAGTTCTGACATTCTCACACCGTTACACTCTGTTTTTTC GAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTT 176 TTerm_0071 NZ_LR027880.1 438124 438138 15 438143 438157 15 4 80 0 15 63 36 66 33 0 438140 ATAGGCGTATCATTA TAGTGGTACGCTTAT True TAATGAGGA TTTTGTCCC False True + ATAGGCGTATCATTA GAAA TAGTGGTACGCTTAT TTTTGTCCC 54 RIL182_RS02155 intergenic 438118 438233 + down TGAGGATAGGCGTATCATTAGAAATAGTGGTACGCTTATTTTTGTCCCTTTTTGCAGATTTGTCCTTTCCCCTGCTTTCCAATATAATGAAGCTAAAGAAGTGGAGGTGTGCTTA GTTGAAGCATTTTGAAGTGATTTAATGAGGATAGGCGTATCATTAGAAATAGTGGTACGCTTATTTTTGTCCCTTTTTGCAGATTTGTCCTTTCCCCTGCTTTCCAATATAATGAAGCTAAAGAAGTGGAGGTGTGCTTATGAGAGAGAAATTTAATCATCTGTA TGAGGATAGGCGTATCATTAGAAATAGTGGTACGCTTAT 39 TTerm_0072 NZ_LR027880.1 438424 438439 16 438447 438462 16 7 87 0 22 56 43 57 42 0 438442 AAGCCGCTTATTCTTA TAAGAGTAGGCGGCTT True AAATTACGA TTTTGCGTT False True + AAGCCGCTTATTCTTA TTGATTT TAAGAGTAGGCGGCTT TTTTGCGTT 60 RIL182_RS02160 intergenic 438412 438538 + down GGCAAATTACGAAGCCGCTTATTCTTATTGATTTTAAGAGTAGGCGGCTTTTTTGCGTTCTCTGGTACTGTTTACATAGCTACCTTGACAAAGTGGCTAAATCTATGTGAAAGGAGGACGCATCTA GAGAATGAAAATTGAATATGTCTAAGGCAAATTACGAAGCCGCTTATTCTTATTGATTTTAAGAGTAGGCGGCTTTTTTGCGTTCTCTGGTACTGTTTACATAGCTACCTTGACAAAGTGGCTAAATCTATGTGAAAGGAGGACGCATCTATGTCAAATTGCAAAGTAATTGCTCT GGCAAATTACGAAGCCGCTTATTCTTATTGATTTTAAGAGTAGGCGGCTT 50 TTerm_0073 NZ_LR027880.1 475790 475802 13 475810 475822 13 7 84 0 16 53 46 54 45 0 475805 AGGCAGGTAATTC GAATTGTCTGCCT True AGAGGGGCA CTTTTAGCT False True + AGGCAGGTAATTC TTGAACG GAATTGTCTGCCT CTTTTAGCT 48 RIL182_RS02325 intergenic 475759 475908 + down TTCTCAATATTATTGCATTCATAGAGGGGCAGGCAGGTAATTCTTGAACGGAATTGTCTGCCTCTTTTAGCTTACTATTTTGTAAGTCAAAATTCATCTAATTGTAAGGTTGGCTCTATATCATAATATAGGAAAGATGGAGAACACCA CGTAGATATAATTAGTGTGCAATAGTTCTCAATATTATTGCATTCATAGAGGGGCAGGCAGGTAATTCTTGAACGGAATTGTCTGCCTCTTTTAGCTTACTATTTTGTAAGTCAAAATTCATCTAATTGTAAGGTTGGCTCTATATCATAATATAGGAAAGATGGAGAACACCATGAAAAAACGATTATCTAAAAAAAC TTCTCAATATTATTGCATTCATAGAGGGGCAGGCAGGTAATTCTTGAACGGAATTGTCTGCCT 63 TTerm_0074 NZ_LR027880.1 477120 477132 13 477137 477149 13 4 84 0 16 38 61 36 63 0 477134 CCCTCTAAACCCG CGAGTTTGGAGGG True TTTTACTGC ATTTTTATG False True + CCCTCTAAACCCG TTTT CGAGTTTGGAGGG ATTTTTATG 56 RIL182_RS02335 intergenic 476980 477469 + down GATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGGATTTTTATGTGTTGGTCAAGCACGACCATCACGCTGCTTATCAGAAGCAGCAGTTATTTACATAGTGTCACGTAGAAGTGAGGATAACTTATTAAAAAAAGCCTTGCTTGCTCGTGGCACTTTTCTACTTTTCGAGTAGAAGTCACATATCTATATCATAGAGATAATTATGCGTGTTGCCGTAGAGGTCTTAGTACCTTTGCGGCTTTTTGTTTGTTGTTTTTTGTCGCAACACAGGATAAACCTGCTTCTGGCATTGGGTGCCGTAGCCCACCTCAATCTGAATTTCTCAAAAAAATTCAGATTGGAGGTACACATTA CGTCATCAAAGAGCCAGACGCATAAGATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGGATTTTTATGTGTTGGTCAAGCACGACCATCACGCTGCTTATCAGAAGCAGCAGTTATTTACATAGTGTCACGTAGAAGTGAGGATAACTTATTAAAAAAAGCCTTGCTTGCTCGTGGCACTTTTCTACTTTTCGAGTAGAAGTCACATATCTATATCATAGAGATAATTATGCGTGTTGCCGTAGAGGTCTTAGTACCTTTGCGGCTTTTTGTTTGTTGTTTTTTGTCGCAACACAGGATAAACCTGCTTCTGGCATTGGGTGCCGTAGCCCACCTCAATCTGAATTTCTCAAAAAAATTCAGATTGGAGGTACACATTATGGCTTACAACAAAGCCAGAGAAGA GATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGG 169 TTerm_0075 NZ_LR027880.1 477328 477338 11 477345 477355 11 6 81 0 12 36 63 33 66 0 477341 GCCGTAGAGGT ACCTTTGCGGC True TGCGTGTTG TTTTTGTTT False True + GCCGTAGAGGT CTTAGT ACCTTTGCGGC TTTTTGTTT 40 RIL182_RS02335 intergenic 476980 477469 + down GATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGGATTTTTATGTGTTGGTCAAGCACGACCATCACGCTGCTTATCAGAAGCAGCAGTTATTTACATAGTGTCACGTAGAAGTGAGGATAACTTATTAAAAAAAGCCTTGCTTGCTCGTGGCACTTTTCTACTTTTCGAGTAGAAGTCACATATCTATATCATAGAGATAATTATGCGTGTTGCCGTAGAGGTCTTAGTACCTTTGCGGCTTTTTGTTTGTTGTTTTTTGTCGCAACACAGGATAAACCTGCTTCTGGCATTGGGTGCCGTAGCCCACCTCAATCTGAATTTCTCAAAAAAATTCAGATTGGAGGTACACATTA CGTCATCAAAGAGCCAGACGCATAAGATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGGATTTTTATGTGTTGGTCAAGCACGACCATCACGCTGCTTATCAGAAGCAGCAGTTATTTACATAGTGTCACGTAGAAGTGAGGATAACTTATTAAAAAAAGCCTTGCTTGCTCGTGGCACTTTTCTACTTTTCGAGTAGAAGTCACATATCTATATCATAGAGATAATTATGCGTGTTGCCGTAGAGGTCTTAGTACCTTTGCGGCTTTTTGTTTGTTGTTTTTTGTCGCAACACAGGATAAACCTGCTTCTGGCATTGGGTGCCGTAGCCCACCTCAATCTGAATTTCTCAAAAAAATTCAGATTGGAGGTACACATTATGGCTTACAACAAAGCCAGAGAAGA GATGCAGAGCCGATGAACAAGTGAGTAATCGCAGTTTGTCGGCTCTGTTTTTATATAACCATAGGTAGGACAAGCCCGCCGAATAAAAAAAACGGTGCTTTGGTGGGCGGCTTTGTCACGCCCAGACTAAATTTTACTGCCCTCTAAACCCGTTTTCGAGTTTGGAGGGATTTTTATGTGTTGGTCAAGCACGACCATCACGCTGCTTATCAGAAGCAGCAGTTATTTACATAGTGTCACGTAGAAGTGAGGATAACTTATTAAAAAAAGCCTTGCTTGCTCGTGGCACTTTTCTACTTTTCGAGTAGAAGTCACATATCTATATCATAGAGATAATTATGCGTGTTGCCGTAGAGGTCTTAGTACCTTTGCGGC 375 TTerm_0076 NZ_LR027880.1 477926 477937 12 477947 477958 12 9 83 0 14 41 58 40 60 0 477941 ACAGGGTGAGAG CTCTTGCCCTGT True CACGGGCTA TTTCCTTTG False True + ACAGGGTGAGAG GACAAAAAA CTCTTGCCCTGT TTTCCTTTG 52 RIL182_RS02340 intergenic 477897 478483 + down AGGGGAAAATTGAATATTCCCACGGGCTACAGGGTGAGAGGACAAAAAACTCTTGCCCTGTTTTCCTTTGTGTGGCGAAAACGGGATTGCTCCTTGATAAATGAATACCCATTCGCCAAATACTTTCTCTTTGTGATTGTGATGAGCATAAGCGTGTGCAGCGGTACGCCACGACCTGTCAAAAGGCAGCGAGCGATTGAAAGGTGGTGAGACTATCTTTACCGACTCAAAATATCGGGCAGCTCCCGATTTCGCCATAACCCACAAAGAGGATAATGATACTCCCGTCCAGTCACAGTCCGAGCGTGAAAAAACCGTCGCAGGCAATGAGGGCGGCTCTGTCAGAACGACAGTTGGGGTGGAACTCCCGTGGCGTCAGTTCGCTGCTGACCGTTTGGCGACTTCCCATAGCATTTCGGGGTGTCGAGGACAAATTGAAATGCTTCTATCATATCAGCCAAACGAAAGGCGGTCATAAGAACAGAGATATTGATAATATTCTTCCGACCTTAAAAACTTCCTTTTGTTTGGCTGCCTACATAGGCAGAACTCATCTGCCTAAATCCAGATGGGAGGTCAAACACAA AGGGGAAAATTGAATATTCCCACGGGCTACAGGGTGAGAGGACAAAAAACTCTTGCCCTGT 61 TTerm_0077 NZ_LR027880.1 478891 478904 14 478910 478923 14 5 85 0 18 50 50 50 50 0 478906 CGGCTGTATTTCTA TAGAGGTACAGCCG True TAAAATGGC TTTTAGCTT True True + CGGCTGTATTTCTA TAATT TAGAGGTACAGCCG TTTTAGCTT 60 RIL182_RS02355 intergenic 478839 478951 + down AAAAATGTGTAAAGCAGGTATGCGGGATAGATTTGCACATTGGTAAAATGGCGGCTGTATTTCTATAATTTAGAGGTACAGCCGTTTTAGCTTTAGCGGAGGTATTCGTTTA TAGTGTTGCACTTAAAAAAATATGAAAAAATGTGTAAAGCAGGTATGCGGGATAGATTTGCACATTGGTAAAATGGCGGCTGTATTTCTATAATTTAGAGGTACAGCCGTTTTAGCTTTAGCGGAGGTATTCGTTTATGGGAAATGAAAATTTAATTCAAAA AAAAATGTGTAAAGCAGGTATGCGGGATAGATTTGCACATTGGTAAAATGGCGGCTGTATTTCTATAATTTAGAGGTACAGCCG 84 TTerm_0078 NZ_LR027880.1 498478 498489 12 498495 498506 12 5 83 0 14 58 41 60 40 0 498491 AAAGGCACAGCA TGTTGTGCTTTT True CGTAAAGGA TTTGTGGGC False True + AAAGGCACAGCA GAAAA TGTTGTGCTTTT TTTGTGGGC 44 RIL182_RS02485 intergenic 498459 498566 + down ATAAACAGAACGTAAAGGAAAGGCACAGCAGAAAATGTTGTGCTTTTTTTGTGGGCAGATACGGGCAGTGTGCCATATCTGCCCGCTGTGTTTAAAGGAGAAATGCA CAATAAGATCGGAATCATGGATTAAATAAACAGAACGTAAAGGAAAGGCACAGCAGAAAATGTTGTGCTTTTTTTGTGGGCAGATACGGGCAGTGTGCCATATCTGCCCGCTGTGTTTAAAGGAGAAATGCATGAAATATATCAAACAGAAAATCCT ATAAACAGAACGTAAAGGAAAGGCACAGCAGAAAATGTTGTGCTTTT 47 TTerm_0079 NZ_LR027880.1 513966 513974 9 513979 513987 9 4 88 0 13 50 50 50 50 0 513976 GACCATTAC GTAGTGGTC True GAATACAGG TTTTCTGTA False True + GACCATTAC TTCG GTAGTGGTC TTTTCTGTA 50 RIL182_RS02590 intergenic 513946 514034 + down TTATCAGAAGGGAATACAGGACCATTACTTCGGTAGTGGTCTTTTCTGTACTCTTAAAAGCTGTGAATTTATGAGGAGGAAACATAGT GTTGAGAGAGTTAGAAAAAAATTAATTATCAGAAGGGAATACAGGACCATTACTTCGGTAGTGGTCTTTTCTGTACTCTTAAAAGCTGTGAATTTATGAGGAGGAAACATAGTTGAAAGATTTTGAAGGGTTCATTAA TTATCAGAAGGGAATACAGGACCATTACTTCGGTAGTGGTC 41 TTerm_0080 NZ_LR027880.1 534513 534518 6 534523 534528 6 4 100 0 12 83 16 83 16 0 534520 ACTATA TATAGT True AGTATGAAA ATGTTTTAT False True + ACTATA AAAA TATAGT ATGTTTTAT 32 RIL182_RS02680 intergenic 534492 534619 + down GATATATATACAAGTATGAAACTATAAAAATATAGTATGTTTTATGTGGTAAAAATATTGTATTTATGAGACTTTTGGTATTTCACAAATACCTAAGAAAAAATAAAGTAGAGGAGAGTGTATATTA AGGCAGATATTATATGTTTGCATAAGATATATATACAAGTATGAAACTATAAAAATATAGTATGTTTTATGTGGTAAAAATATTGTATTTATGAGACTTTTGGTATTTCACAAATACCTAAGAAAAAATAAAGTAGAGGAGAGTGTATATTATGAATATTGATTACAGTCAGTTTTA GATATATATACAAGTATGAAACTATAAAAATATAGT 36 TTerm_0081 NZ_LR027880.1 537755 537760 6 537766 537771 6 5 100 0 12 100 0 100 0 0 537762 TATATT AATATA True CCGGGATGT TTTTGAGAA False True + TATATT TGATC AATATA TTTTGAGAA 24 RIL182_RS02700 intergenic 537733 537792 + down AGCAGCACAGTCTCCGGGATGTATATTTGATCAATATATTTTGAGAAGGAGACGATGTA GAGAAAGCTGATGACAGGCCGTTAAAGCAGCACAGTCTCCGGGATGTATATTTGATCAATATATTTTGAGAAGGAGACGATGTATGAGGGTAGCAATCTGCGATGATAA AGCAGCACAGTCTCCGGGATGTATATTTGATCAATATA 38 TTerm_0082 NZ_LR027880.1 540542 540552 11 540559 540569 11 6 90 0 17 40 59 40 60 0 540555 AGTCCTTTCCG CGGAAGGGACT True AAATAGATA TTTTTTCTG False True + AGTCCTTTCCG AACAAA CGGAAGGGACT TTTTTTCTG 66 RIL182_RS02720 intergenic 540543 540918 + down TCCTTTCCGAACAAACGGAAGGGACTTTTTTTCTGGAAAACAGGAAGGATGACAATCCAAGACGGTAACTTATTACAGGTACCGTAAGACTTATTACACTTATATTGAAACGCACTTTCTTTCCAAGTATAGTACCGCAAAAAGGCTTAGGAGAAGAAAGGCGTGGCATGTTTTGGGGAATTCATGCCGCACCGGATTGCAGGGGGCGGCAGAAAGGGAAAAGTTCATAAGGATAACATCCGGGTGCAGTTTTGCATGCTTTATTTTGCATGGGAACAGCACCTTTTTTTATTGTCTTTTTCCAGTGAAGTAAAACCCAGAGGCCCTCCAGATGTCCTTCATTTCAAAAAAATTACGAAATGGAGGACATTTGAA ACAGTCACATACCGAAAATAGATAGTCCTTTCCGAACAAACGGAAGGGACTTTTTTTCTGGAAAACAGGAAGGATGACAATCCAAGACGGTAACTTATTACAGGTACCGTAAGACTTATTACACTTATATTGAAACGCACTTTCTTTCCAAGTATAGTACCGCAAAAAGGCTTAGGAGAAGAAAGGCGTGGCATGTTTTGGGGAATTCATGCCGCACCGGATTGCAGGGGGCGGCAGAAAGGGAAAAGTTCATAAGGATAACATCCGGGTGCAGTTTTGCATGCTTTATTTTGCATGGGAACAGCACCTTTTTTTATTGTCTTTTTCCAGTGAAGTAAAACCCAGAGGCCCTCCAGATGTCCTTCATTTCAAAAAAATTACGAAATGGAGGACATTTGAATGTCAGAATGGATCAGGATCAGAGT TCCTTTCCGAACAAACGGAAGGGACT 26 TTerm_0083 NZ_LR027880.1 546960 546983 24 546990 547013 24 6 83 0 28 62 37 70 30 0 546986 TTTATGGTAAGAATAAAATGCCCG CGGGCGTTTTATTGTTGGCATAAA True CCTGCCAGT ATAGGAAAG True True + TTTATGGTAAGAATAAAATGCCCG ATGATC CGGGCGTTTTATTGTTGGCATAAA ATAGGAAAG 104 RIL182_RS02745 intergenic 546909 547115 + down GGCTGCGGCAGGAATGGCAGCAAGTAAATAGGAAACGTTGTTCCTGCCAGTTTATGGTAAGAATAAAATGCCCGATGATCCGGGCGTTTTATTGTTGGCATAAAATAGGAAAGGACAGCAGAAAGCATATAACGGAAAATGAGTAAAAGAAAGTGGATATAAAAAAAGCACATGAAGTAAGTGTGCGACAGGAGGAGAAAAGCGTA GGAACAGGAGATTCGATATGAGTAAGGCTGCGGCAGGAATGGCAGCAAGTAAATAGGAAACGTTGTTCCTGCCAGTTTATGGTAAGAATAAAATGCCCGATGATCCGGGCGTTTTATTGTTGGCATAAAATAGGAAAGGACAGCAGAAAGCATATAACGGAAAATGAGTAAAAGAAAGTGGATATAAAAAAAGCACATGAAGTAAGTGTGCGACAGGAGGAGAAAAGCGTATGAATTATGAGCAACTGATAGAAGA GGCTGCGGCAGGAATGGCAGCAAGTAAATAGGAAACGTTGTTCCTGCCAGTTTATGGTAAGAATAAAATGCCCGATGATCCGGGCGTTTTATTGTTGGCATAAA 104 TTerm_0084 NZ_LR027880.1 550103 550108 6 550118 550123 6 9 100 0 12 83 16 83 16 0 550112 ATCATA TATGAT True TCCTAATTA TAATTTTTG False True + ATCATA CAAGTAGGT TATGAT TAATTTTTG 32 RIL182_RS02765 intergenic 549841 550112 - down CTTGTATGATAATTAGGAAGTTAATTATCACATATTTCCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACATTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTC TGGATCAAAAATTAATCATAACCTACTTGTATGATAATTAGGAAGTTAATTATCACATATTTCCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACATTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTCATGAAAATTTACGTAGGCATTGATA GAGGTTGTACCTCCCTTTCCTAAAGTCTGATACCATGATGTCCACCAACGATTATCATCGTAGACTTGATAGAAATAAGTACTCTGAGTGAAAAACACTCCGGCAACATCCAGCTAATAAACAATTCAGATAAATGTAGTGGCAATACACTCCAGTTGAGTAGTCAAGCTACAGAAAACAAATCAAAAGTCCATAGTATCTGAATTGTATTGAACCACGATATTAAAAGAAAGGAAATATGTGATAATTAACTTCCTAATTATCATACAAGTAGGTTATGAT 282 TTerm_0085 NZ_LR027880.1 558290 558309 20 558316 558335 20 6 85 0 25 62 37 64 35 0 558312 AGGAAAAGAGAACTGTGAGA TCTCACGGTTCTTTTTTACT True TAACGTATA TGACAAGTG True True + AGGAAAAGAGAACTGTGAGA AAATAA TCTCACGGTTCTTTTTTACT TGACAAGTG 74 RIL182_RS02805 intergenic 558154 558426 + down GCGTATAAAAAAATCTGAAACTGAAAAAAGGCTCCAAATACTGTCTGATGGATTCGAAATATTATCCGACGGAGCGTGATACATGGGTAACAAGGTCGAAAGTATACAAGTTTACAGCAAAATAAAATAACGTATAGGAAAAGAGAACTGTGAGAAAATAATCTCACGGTTCTTTTTTACTTGACAAGTGATGGTATCTTCCTGTATGATAAAAAGCGTAAAGATTGCACACAATTAAATTTAAAACAATGATTTTGAGATGGAGAGAAAAA GATATTGAAAGAGGGAGAAGTGTGAGCGTATAAAAAAATCTGAAACTGAAAAAAGGCTCCAAATACTGTCTGATGGATTCGAAATATTATCCGACGGAGCGTGATACATGGGTAACAAGGTCGAAAGTATACAAGTTTACAGCAAAATAAAATAACGTATAGGAAAAGAGAACTGTGAGAAAATAATCTCACGGTTCTTTTTTACTTGACAAGTGATGGTATCTTCCTGTATGATAAAAAGCGTAAAGATTGCACACAATTAAATTTAAAACAATGATTTTGAGATGGAGAGAAAAATGGAGAGAGCAGACATAGCGATTAT GCGTATAAAAAAATCTGAAACTGAAAAAAGGCTCCAAATACTGTCTGATGGATTCGAAATATTATCCGACGGAGCGTGATACATGGGTAACAAGGTCGAAAGTATACAAGTTTACAGCAAAATAAAATAACGTATAGGAAAAGAGAACTGTGAGAAAATAATCTCACGGTTCTTTTTTACT 181 TTerm_0086 NZ_LR027880.1 586970 586986 17 586992 587009 18 5 94 5 24 48 51 47 52 0 586988 AAAAAGCTGACTGCCGG CCGGCAAGTCAGCTTTTT True TATTATTAA GGTTTGCGC True True + AAAAAGCTGACTGCCGG GCAAA CCGGCAAGTCAGCTTTTT GGTTTGCGC 88 RIL182_RS02945 intergenic 586929 587493 + down ATAACAGAATGCACGTTCTACGAACATTTTATTATTATTAAAAAAGCTGACTGCCGGGCAAACCGGCAAGTCAGCTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCA ATAACAGAATGCACGTTCTACGAACATTTTATTATTATTAAAAAAGCTGACTGCCGGGCAAACCGGCAAGTCAGCTTTTT 80 TTerm_0087 NZ_LR027880.1 606873 606890 18 606895 606912 18 4 94 0 31 52 47 52 47 0 606892 ACAGTAAAAACCCCGAAG CTTCGGGGTTTTTGCTGT True ATACATCAA CTATATAGG True True + ACAGTAAAAACCCCGAAG GTGA CTTCGGGGTTTTTGCTGT CTATATAGG 94 RIL182_RS03020 intergenic 606809 607024 + down TATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGTCTATATAGGAAAATCAATGGCTGAGAGATTTTTTTGCGTGTGAAAAATTCGCTTGTATGAAACTAAAAAAAATGAAGTGTCTGGGAATTTTCTGGGAGTTTTTTATAATTCT TTTCGTATCCAGAGAGTTACATTAATATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGTCTATATAGGAAAATCAATGGCTGAGAGATTTTTTTGCGTGTGAAAAATTCGCTTGTATGAAACTAAAAAAAATGAAGTGTCTGGGAATTTTCTGGGAGTTTTTTATAATTCTTATTTCCAGTAACGGGAATTTTGAA TATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGT 103 TTerm_0088 NZ_LR027880.1 606873 606890 18 606895 606912 18 4 94 0 31 52 47 52 47 0 606892 ACAGTAAAAACCCCGAAG CTTCGGGGTTTTTGCTGT True ATACATCAA CTATATAGG True True + ACAGTAAAAACCCCGAAG GTGA CTTCGGGGTTTTTGCTGT CTATATAGG 94 RIL182_RS03025 intergenic 606809 607024 - down AGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTGTTGATGTATATACTAACTAAGGGGATTAGATTTCACCAATCTAATCAAATTAGATTAGTGCATA TTCAAAATTCCCGTTACTGGAAATAAGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTGTTGATGTATATACTAACTAAGGGGATTAGATTTCACCAATCTAATCAAATTAGATTAGTGCATATTAATGTAACTCTCTGGATACGAAA TATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGT 103 TTerm_0089 NZ_LR027880.1 609362 609373 12 609378 609389 12 4 100 0 24 50 50 50 50 0 609375 AAAACCCCGAAG CTTCGGGGTTTT True CAACAGTGA TGCTGAAAA True True + AAAACCCCGAAG GTGA CTTCGGGGTTTT TGCTGAAAA 80 RIL182_RS03045 intergenic 609206 609401 + down TCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGAAAAATC AGTAAAAGCGTTTCTGGAAAAATAGTCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGAAAAATCTAGAAATCTTCATCGTCCGTCCACA TCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTT 183 TTerm_0090 NZ_LR027880.1 609362 609373 12 609378 609389 12 4 100 0 24 50 50 50 50 0 609375 AAAACCCCGAAG CTTCGGGGTTTT True CAACAGTGA TGCTGAAAA True True + AAAACCCCGAAG GTGA CTTCGGGGTTTT TGCTGAAAA 80 RIL182_RS03050 intergenic 609206 609401 - down GATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTCACTGTTGATGTATATACTAACTAAGGGGATACATTTTTTCGCATTTTCCTTAGTTTCTGATTTGATAAAAGCCTTTATTTTCGGCATTTTCTGATTATCTGTCGTTTTGCTCTAAGCTGAAATTCCCAGTCAGATTCCCAGACAAATTCCCAGA TGTGGACGGACGATGAAGATTTCTAGATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTCACTGTTGATGTATATACTAACTAAGGGGATACATTTTTTCGCATTTTCCTTAGTTTCTGATTTGATAAAAGCCTTTATTTTCGGCATTTTCTGATTATCTGTCGTTTTGCTCTAAGCTGAAATTCCCAGTCAGATTCCCAGACAAATTCCCAGACTATTTTTCCAGAAACGCTTTTACT TCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTT 183 TTerm_0091 NZ_LR027880.1 615144 615160 17 615166 615182 17 5 94 0 29 50 50 50 50 0 615162 AAAAACTGCCACATCGG CCGGTGTGGCAGTTTTT True GCAAAAATA TAATCACTC True True + AAAAACTGCCACATCGG ACAAC CCGGTGTGGCAGTTTTT TAATCACTC 98 RIL182_RS21110 intergenic 615145 615271 + down AAACTGCCACATCGGACAACCCGGTGTGGCAGTTTTTTAATCACTCTTACAAGTAAAAATAGCCGGTTTGGTAAAATGAGCCTGTAAACAAAAACAAGTCTTTAAGAAAAGAGAGGGCATACGTCA TAAACATGACATAAGGCAAAAATAAAAACTGCCACATCGGACAACCCGGTGTGGCAGTTTTTTAATCACTCTTACAAGTAAAAATAGCCGGTTTGGTAAAATGAGCCTGTAAACAAAAACAAGTCTTTAAGAAAAGAGAGGGCATACGTCATGGAAACAGTTCTTTTAATCATTTA AAACTGCCACATCGGACAACCCGGTGTGGCAGTTTTT 37 TTerm_0092 NZ_LR027880.1 617631 617653 23 617661 617683 23 7 91 0 36 56 43 57 42 0 617656 AAACAGAAAAATACCGGAGTTCC GGAGCCCCGGTATTTTTCTGTTT True AGTTTACTA TATGAGTGA True True + AAACAGAAAAATACCGGAGTTCC ATGAAAA GGAGCCCCGGTATTTTTCTGTTT TATGAGTGA 112 RIL182_RS03080 intergenic 617451 617693 + down TAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGAT GCTTAGACTTAAGGCAGGAGCCTAATAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGATCATCCGCCATTTCCGTCGGAGTTGT TAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTT 232 TTerm_0093 NZ_LR027880.1 617631 617653 23 617661 617683 23 7 91 0 36 56 43 57 42 0 617656 AAACAGAAAAATACCGGAGTTCC GGAGCCCCGGTATTTTTCTGTTT True AGTTTACTA TATGAGTGA True True + AAACAGAAAAATACCGGAGTTCC ATGAAAA GGAGCCCCGGTATTTTTCTGTTT TATGAGTGA 112 RIL182_RS03085 intergenic 617451 617693 - down ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTA ACAACTCCGACGGAAATGGCGGATGATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTATTAGGCTCCTGCCTTAAGTCTAAGC TAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTT 232 TTerm_0094 NZ_LR027880.1 621569 621579 11 621585 621595 11 5 100 0 22 45 54 45 54 0 621581 ACCTCAGCAGT ACTGCTGAGGT True CTAATGAGA TATTTTTTT False True + ACCTCAGCAGT GAGAA ACTGCTGAGGT TATTTTTTT 68 RIL182_RS03095 intergenic 621560 621751 + down CTAATGAGACCTCAGCAGTGAGAAACTGCTGAGGTTATTTTTTTGCCCGGGGAGGCGCAACAGCCAGTGGTCACAGACAGAAAATTTCGAATATCCCTACCATAACTCAGAAAAATGTGGTAGCATAACAAAAGAACAAAAACAGTAAAGCAGTTATGGACGTTTCAAATACCCGGAATCGAGGCATCGTA CAAGGTTCGAATCCTTGTAGCCCTGCTAATGAGACCTCAGCAGTGAGAAACTGCTGAGGTTATTTTTTTGCCCGGGGAGGCGCAACAGCCAGTGGTCACAGACAGAAAATTTCGAATATCCCTACCATAACTCAGAAAAATGTGGTAGCATAACAAAAGAACAAAAACAGTAAAGCAGTTATGGACGTTTCAAATACCCGGAATCGAGGCATCGTATGTATAGTTTTAGCAACCGTGTGCG CTAATGAGACCTCAGCAGTGAGAAACTGCTGAGGT 35 TTerm_0095 NZ_LR027880.1 623814 623835 22 623842 623863 22 6 90 0 34 59 40 60 40 0 623838 GAAAAATCCCGGTACAAATGGA TCCATCTGTATCGGGATTTTTC True GTTAACATG CTATTTTGC True True + GAAAAATCCCGGTACAAATGGA TATGTT TCCATCTGTATCGGGATTTTTC CTATTTTGC 92 RIL182_RS03110 intergenic 623761 623906 + down AAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTCCTATTTTGCCGGCACAACATATAATCCGTGAATATATATTGTT GATCGAAGCTATTGCTGTAAAATAAAAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTCCTATTTTGCCGGCACAACATATAATCCGTGAATATATATTGTTTAAATGTAGACGTCAATATTTCCGC AAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTC 102 TTerm_0096 NZ_LR027880.1 623814 623835 22 623842 623863 22 6 90 0 34 59 40 60 40 0 623838 GAAAAATCCCGGTACAAATGGA TCCATCTGTATCGGGATTTTTC True GTTAACATG CTATTTTGC True True + GAAAAATCCCGGTACAAATGGA TATGTT TCCATCTGTATCGGGATTTTTC CTATTTTGC 92 RIL182_RS03115 intergenic 623761 623906 - down AACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTTCATGTTAACCTATGGTAACAGATCTGCTTACACAACGTGTAATCCATTGCTTT GCGGAAATATTGACGTCTACATTTAAACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTTCATGTTAACCTATGGTAACAGATCTGCTTACACAACGTGTAATCCATTGCTTTTTATTTTACAGCAATAGCTTCGATC AAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTC 102 TTerm_0097 NZ_LR027880.1 628439 628444 6 628452 628457 6 7 100 0 12 83 16 83 16 0 628447 ATATAC GTATAT True CATGTTTGA TTTTTCAAT False True + ATATAC TGTTCGC GTATAT TTTTTCAAT 32 RIL182_RS03135 intergenic 628397 628492 + down AAGCTAAGATCAGTATTTCTTGAAATATTACACCATGTTTGATATACTGTTCGCGTATATTTTTTCAATATATGGAAATGAATATGGGTGTAAAA AACGAAAAATTCGGAACAGAAATAAAAGCTAAGATCAGTATTTCTTGAAATATTACACCATGTTTGATATACTGTTCGCGTATATTTTTTCAATATATGGAAATGAATATGGGTGTAAAATGATTAAGAAAATAGATATTCTTGG AAGCTAAGATCAGTATTTCTTGAAATATTACACCATGTTTGATATACTGTTCGCGTATAT 60 TTerm_0098 NZ_LR027880.1 630099 630111 13 630117 630129 13 5 92 0 21 57 42 58 41 0 630113 GAGGAAGTGCATA TATGCATTTCCTC True CATACATTG TTTCTTTTT False True + GAGGAAGTGCATA AAAAA TATGCATTTCCTC TTTCTTTTT 58 RIL182_RS03145 intergenic 630041 630334 + down ATTTTTTCTTTGTGAACTATGTACACTGTAAAAAATAGGAAAAAAGCAGCATACATTGAGGAAGTGCATAAAAAATATGCATTTCCTCTTTCTTTTTTTGCTGTTTTGCATTAAAATAGAATCTAGGTATTTTTGAGTGGGGACAATGGGTATATTTTTATTGTGAAAGTTGCCCATGCGTGCAATGGAGGTTATGCACTGTGGCATAGGATCATTCGGACAGCTGACAGCTGCAGCAACCTGATTTGCCGGGTGTGTTTCAAATGAAACGAAGATAGAAGGAGTGGAGCTTA AGGATTTCAGGAACAGATGTCATAAATTTTTTCTTTGTGAACTATGTACACTGTAAAAAATAGGAAAAAAGCAGCATACATTGAGGAAGTGCATAAAAAATATGCATTTCCTCTTTCTTTTTTTGCTGTTTTGCATTAAAATAGAATCTAGGTATTTTTGAGTGGGGACAATGGGTATATTTTTATTGTGAAAGTTGCCCATGCGTGCAATGGAGGTTATGCACTGTGGCATAGGATCATTCGGACAGCTGACAGCTGCAGCAACCTGATTTGCCGGGTGTGTTTCAAATGAAACGAAGATAGAAGGAGTGGAGCTTATGATTTCAAATCAGATACTTCAAAA ATTTTTTCTTTGTGAACTATGTACACTGTAAAAAATAGGAAAAAAGCAGCATACATTGAGGAAGTGCATAAAAAATATGCATTTCCTC 88 TTerm_0099 NZ_LR027880.1 634371 634380 10 634386 634395 10 5 80 0 10 20 80 12 87 0 634382 GGACTGCCGC GCGGTGGTCC True TGTTTTTGG TTTTTAAAT False True + GGACTGCCGC AATGC GCGGTGGTCC TTTTTAAAT 60 RIL182_RS03165 intergenic 634356 634589 + down TGCGGATGTTTTTGGGACTGCCGCAATGCGCGGTGGTCCTTTTTAAATTGGTTGGATTTGTGTAGTAGGACAGCGAATTTTCACATATGAATGATATGATAAGTAATGTGGAGTGTAGTATAAAAGGCAATATAAAATAAAAATGTGGCTGGTCACACAACAGGTGGGAATAGCGGTGTAAAACGGCAGCAAAAACGGCAGCATAAAAACAGCGCAGGAATGGAGACAGAATA CCCGTGGAGTTATCTGGGCAGATGATGCGGATGTTTTTGGGACTGCCGCAATGCGCGGTGGTCCTTTTTAAATTGGTTGGATTTGTGTAGTAGGACAGCGAATTTTCACATATGAATGATATGATAAGTAATGTGGAGTGTAGTATAAAAGGCAATATAAAATAAAAATGTGGCTGGTCACACAACAGGTGGGAATAGCGGTGTAAAACGGCAGCAAAAACGGCAGCATAAAAACAGCGCAGGAATGGAGACAGAATATGGAAAATAAAAATGAGCAGCAGGT TGCGGATGTTTTTGGGACTGCCGCAATGCGCGGTGGTCC 39 TTerm_0100 NZ_LR027880.1 645228 645237 10 645242 645251 10 4 90 0 15 75 25 77 22 0 645239 AAGAAAAACG CGTTTTTTTT True GGAAAAAGA TTGGAAAAA True True + AAGAAAAACG GCGA CGTTTTTTTT TTGGAAAAA 46 RIL182_RS03220 intergenic 644925 645283 + down AAAGTCAGTTCCATGCTGCCCATTGCTGCAGGAAAATCAGAAAAGTCTGTTACTGTTTATGCCTTGCCGGGCGTTTGGGTAATAAAGATTTTCTGCGTATGGGCGGCACATACTGCCGCTTTCTATGGATTTGGAAATAATGTATAAATATACATAAATATGCATAAAATCTTAGTGCTATTTGTTTTAGGAAAAAGGTTGAAAAATATCTTATGATATGATACACTTTTTACAATTTAGGAAAAAGACTATAGGTACTAATAAGGGAAAGTTCAGTCAGGGGACTGTCTGGATGGAAAAAGAAGAAAAACGGCGACGTTTTTTTTTTGGAAAAAAAGTGAAAGGACAGGGAAACGAA ACTTGCGTTTCAGAAGATTATTTAAAAAGTCAGTTCCATGCTGCCCATTGCTGCAGGAAAATCAGAAAAGTCTGTTACTGTTTATGCCTTGCCGGGCGTTTGGGTAATAAAGATTTTCTGCGTATGGGCGGCACATACTGCCGCTTTCTATGGATTTGGAAATAATGTATAAATATACATAAATATGCATAAAATCTTAGTGCTATTTGTTTTAGGAAAAAGGTTGAAAAATATCTTATGATATGATACACTTTTTACAATTTAGGAAAAAGACTATAGGTACTAATAAGGGAAAGTTCAGTCAGGGGACTGTCTGGATGGAAAAAGAAGAAAAACGGCGACGTTTTTTTTTTGGAAAAAAAGTGAAAGGACAGGGAAACGAATGAAAGCTCATTTAATACTCGAAGA AAAGTCAGTTCCATGCTGCCCATTGCTGCAGGAAAATCAGAAAAGTCTGTTACTGTTTATGCCTTGCCGGGCGTTTGGGTAATAAAGATTTTCTGCGTATGGGCGGCACATACTGCCGCTTTCTATGGATTTGGAAATAATGTATAAATATACATAAATATGCATAAAATCTTAGTGCTATTTGTTTTAGGAAAAAGGTTGAAAAATATCTTATGATATGATACACTTTTTACAATTTAGGAAAAAGACTATAGGTACTAATAAGGGAAAGTTCAGTCAGGGGACTGTCTGGATGGAAAAAGAAGAAAAACGGCGACGTTTTTTTT 326 TTerm_0101 NZ_LR027880.1 649754 649775 22 649780 649801 22 4 95 0 39 70 29 71 28 0 649777 AAAAAACGACATGAAAGCAGTT AATTGCTTTCATGTCGTTTTTT True ACAACATGA ATATCGCCG True True + AAAAAACGACATGAAAGCAGTT AAGA AATTGCTTTCATGTCGTTTTTT ATATCGCCG 94 RIL182_RS03230 intergenic 649594 649849 + down TTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTTATATCGCCGGAATATCCACTCCAACATATAGAAAAAAGTCGCGCGGAT TATTGCGACCGTAAAGAACTTGTAGTTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTTATATCGCCGGAATATCCACTCCAACATATAGAAAAAAGTCGCGCGGATTAACGGAGTTTCATTTTTTTGCGCG TTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTT 207 TTerm_0102 NZ_LR027880.1 649754 649775 22 649780 649801 22 4 95 0 39 70 29 71 28 0 649777 AAAAAACGACATGAAAGCAGTT AATTGCTTTCATGTCGTTTTTT True ACAACATGA ATATCGCCG True True + AAAAAACGACATGAAAGCAGTT AAGA AATTGCTTTCATGTCGTTTTTT ATATCGCCG 94 RIL182_RS03235 intergenic 649594 649849 - down ATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTTTCATGTTGTCGCCAATATCCATATTCCGCAAAAGCAAAAACAGCACGCCTCCTTTTGGATTTGTGCTGTCTTTTCTATATTATAAGATTCAAAGAACTACAAGTTTAAAGAATTATAAATCCAAAGAACTACAAGTTCAAAGAATTATAAATTCAAAGAA CGCGCAAAAAAATGAAACTCCGTTAATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTTTCATGTTGTCGCCAATATCCATATTCCGCAAAAGCAAAAACAGCACGCCTCCTTTTGGATTTGTGCTGTCTTTTCTATATTATAAGATTCAAAGAACTACAAGTTTAAAGAATTATAAATCCAAAGAACTACAAGTTCAAAGAATTATAAATTCAAAGAACTACAAGTTCTTTACGGTCGCAATA TTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTT 207 TTerm_0103 NZ_LR027880.1 652706 652722 17 652731 652746 16 8 88 5 17 90 9 93 6 0 652726 AAAAAGATAAATTTCAA TTGAATTTATTTTTTT True TGAAAGAAA AAAAAAGAT True True + AAAAAGATAAATTTCAA CCGAAAGT TTGAATTTATTTTTTT AAAAAAGAT 42 RIL182_RS03240 intergenic 652509 652855 + down ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAA TATAGGTAATCATGTGTTTTATTAAACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAATGGCAAAGAAAGTAGTTTTAGCAGG ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTT 237 TTerm_0104 NZ_LR027880.1 652748 652761 14 652766 652779 14 4 78 0 13 82 17 90 9 0 652763 AAAAAGATTGTTAA TTAACAGCATTTTT True TTTTTTTAA CGGCAACTT True True + AAAAAGATTGTTAA AAAA TTAACAGCATTTTT CGGCAACTT 34 RIL182_RS03240 intergenic 652509 652855 + down ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAA TATAGGTAATCATGTGTTTTATTAAACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAATGGCAAAGAAAGTAGTTTTAGCAGG ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTT 270 TTerm_0105 NZ_LR027880.1 654054 654063 10 654068 654077 10 4 90 0 15 30 70 33 66 0 654065 TCCCGGGGAA TTCCCGGGGA True ATAGTAATT TTGCATTTT False True + TCCCGGGGAA TGAC TTCCCGGGGA TTGCATTTT 62 RIL182_RS03250 intergenic 654036 654130 + down TAGTTTTTTATAGTAATTCCCGGGGAATGACTTCCCGGGGATTGCATTTTTCAAACATACAGTTAACATAATTATTTTCAGGAGGTAACCGAAA ATGCTCTACAATCGTTGAGAGATAATAGTTTTTTATAGTAATTCCCGGGGAATGACTTCCCGGGGATTGCATTTTTCAAACATACAGTTAACATAATTATTTTCAGGAGGTAACCGAAATGAAGGTTGGCGTTATTGGTGCAGG TAGTTTTTTATAGTAATTCCCGGGGAATGACTTCCCGGGGA 41 TTerm_0106 NZ_LR027880.1 658126 658151 26 658158 658182 25 6 84 3 25 43 56 45 54 0 658154 AAAGCCCGTCTTTCGTGTGCGGCTTC GAAGCTGACAGGAAGGACGGGCTTT True TAAGATAGA TTGCTGGGA False True + AAAGCCCGTCTTTCGTGTGCGGCTTC TGTGAG GAAGCTGACAGGAAGGACGGGCTTT TTGCTGGGA 74 RIL182_RS03270 intergenic 658098 658410 + down TACATAGGTGAATAACCTGTAAGATAGAAAGCCCGTCTTTCGTGTGCGGCTTCTGTGAGGAAGCTGACAGGAAGGACGGGCTTTTTGCTGGGAGCTGGAGAAAATTTGAGGCTTCTTGTTTGGAGTTGGAGGAAATTTGAGGCTCTTGGTCAGGAGTTGAGGGAAAATATACTTAGTTGTTTGTCAAAATCGTTATGGTACAGTTTTTCTGATCCTCAGATACGGAGTCGACCGTGATCGTATACCCGGTATCACAATGGTCAACTGTCCGTTGTTGTCATACCAGCCAAAGCCTGTGGCAGTGCCTCCGAT ATTAAAAGCTGAGTTAGGCAAATAATACATAGGTGAATAACCTGTAAGATAGAAAGCCCGTCTTTCGTGTGCGGCTTCTGTGAGGAAGCTGACAGGAAGGACGGGCTTTTTGCTGGGAGCTGGAGAAAATTTGAGGCTTCTTGTTTGGAGTTGGAGGAAATTTGAGGCTCTTGGTCAGGAGTTGAGGGAAAATATACTTAGTTGTTTGTCAAAATCGTTATGGTACAGTTTTTCTGATCCTCAGATACGGAGTCGACCGTGATCGTATACCCGGTATCACAATGGTCAACTGTCCGTTGTTGTCATACCAGCCAAAGCCTGTGGCAGTGCCTCCGATCACGTCACCGTCCCGGTAAAAGCCA TACATAGGTGAATAACCTGTAAGATAGAAAGCCCGTCTTTCGTGTGCGGCTTCTGTGAGGAAGCTGACAGGAAGGACGGGCTTT 84 TTerm_0107 NZ_LR027880.1 658126 658151 26 658158 658182 25 6 84 3 25 43 56 45 54 0 658154 AAAGCCCGTCTTTCGTGTGCGGCTTC GAAGCTGACAGGAAGGACGGGCTTT True TAAGATAGA TTGCTGGGA False True + AAAGCCCGTCTTTCGTGTGCGGCTTC TGTGAG GAAGCTGACAGGAAGGACGGGCTTT TTGCTGGGA 74 RIL182_RS03275 intergenic 658098 658410 - down ATCGGAGGCACTGCCACAGGCTTTGGCTGGTATGACAACAACGGACAGTTGACCATTGTGATACCGGGTATACGATCACGGTCGACTCCGTATCTGAGGATCAGAAAAACTGTACCATAACGATTTTGACAAACAACTAAGTATATTTTCCCTCAACTCCTGACCAAGAGCCTCAAATTTCCTCCAACTCCAAACAAGAAGCCTCAAATTTTCTCCAGCTCCCAGCAAAAAGCCCGTCCTTCCTGTCAGCTTCCTCACAGAAGCCGCACACGAAAGACGGGCTTTCTATCTTACAGGTTATTCACCTATGTA TGGCTTTTACCGGGACGGTGACGTGATCGGAGGCACTGCCACAGGCTTTGGCTGGTATGACAACAACGGACAGTTGACCATTGTGATACCGGGTATACGATCACGGTCGACTCCGTATCTGAGGATCAGAAAAACTGTACCATAACGATTTTGACAAACAACTAAGTATATTTTCCCTCAACTCCTGACCAAGAGCCTCAAATTTCCTCCAACTCCAAACAAGAAGCCTCAAATTTTCTCCAGCTCCCAGCAAAAAGCCCGTCCTTCCTGTCAGCTTCCTCACAGAAGCCGCACACGAAAGACGGGCTTTCTATCTTACAGGTTATTCACCTATGTATTATTTGCCTAACTCAGCTTTTAAT TACATAGGTGAATAACCTGTAAGATAGAAAGCCCGTCTTTCGTGTGCGGCTTCTGTGAGGAAGCTGACAGGAAGGACGGGCTTT 84 TTerm_0108 NZ_LR027880.1 660765 660781 17 660790 660806 17 8 76 0 14 58 41 61 38 0 660785 AATCCTCTTATATGCAG CTGTATGTGAGGGGATT True AATTGAGGA TTTTTGCGG False True + AATCCTCTTATATGCAG GTTGTTGT CTGTATGTGAGGGGATT TTTTTGCGG 44 RIL182_RS03290 intergenic 660737 660933 + down ATTGAATGAAATATAATATAATTGAGGAATCCTCTTATATGCAGGTTGTTGTCTGTATGTGAGGGGATTTTTTTGCGGTAACATGGGAAATGGAGATCAAAATGAGAAAAAGTCTCAAAAGTGCAGATTGACATTTGCGTCTGGTGCATTGTAAGCTAAAATGATTAGAAAATACTAACCAAAGTTAGAGGGAAAA CAAAAAGGCATTGAAATATAATTAAATTGAATGAAATATAATATAATTGAGGAATCCTCTTATATGCAGGTTGTTGTCTGTATGTGAGGGGATTTTTTTGCGGTAACATGGGAAATGGAGATCAAAATGAGAAAAAGTCTCAAAAGTGCAGATTGACATTTGCGTCTGGTGCATTGTAAGCTAAAATGATTAGAAAATACTAACCAAAGTTAGAGGGAAAATGAGCGAAGGTAAAGTAAAAAGAAA ATTGAATGAAATATAATATAATTGAGGAATCCTCTTATATGCAGGTTGTTGTCTGTATGTGAGGGGATT 69 TTerm_0109 NZ_LR027880.1 665631 665644 14 665650 665663 14 5 92 0 23 53 46 53 46 0 665646 CAGAGAAAGCGATC GATTGCTTTCTCTG True ACGTGCAGC TTTTTTTGT False True + CAGAGAAAGCGATC GCAAA GATTGCTTTCTCTG TTTTTTTGT 70 RIL182_RS03320 intergenic 665407 665717 + down AACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATA GAAATATCTGCATCAGCATGCATAAAACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATATGCCAAAAACAAAGTTACAGGAAGT AACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTG 256 TTerm_0110 NZ_LR027880.1 681863 681876 14 681881 681894 14 4 85 0 18 42 57 41 58 0 681878 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS03400 intergenic 681516 681893 + down AATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT ATATCATTTGTGCTTGAAAAGATAAAATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC AATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 378 TTerm_0111 NZ_LR027880.1 681863 681876 14 681881 681894 14 4 85 0 18 42 57 41 58 0 681878 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS03405 intergenic 681516 681893 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTATATACGTTATGAAATAAAATTTTTATCTCTTGAATAATCACAAAATGTTGCCATTTTGTTGCCAATCACTAAACAAATTTGTTTGTAACCAGCATGAATACTGGTTTCTCGTGATTGTGTGAATTATTCAAACTCTTAATTGTAAAGTTGTTTTGTGGTGTTCGAGATTGCTTTTTGCAGTAGAACGCCGAGAGTTTTGTCTGAATTCTACCTGTTGCGTGGATTTTATGAAGATTGTATTGTCATTTTATTGTCAGCACAATAATTCAACACCTCAACATATAATCCCTAATATGCTTATACCTATT GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTATATACGTTATGAAATAAAATTTTTATCTCTTGAATAATCACAAAATGTTGCCATTTTGTTGCCAATCACTAAACAAATTTGTTTGTAACCAGCATGAATACTGGTTTCTCGTGATTGTGTGAATTATTCAAACTCTTAATTGTAAAGTTGTTTTGTGGTGTTCGAGATTGCTTTTTGCAGTAGAACGCCGAGAGTTTTGTCTGAATTCTACCTGTTGCGTGGATTTTATGAAGATTGTATTGTCATTTTATTGTCAGCACAATAATTCAACACCTCAACATATAATCCCTAATATGCTTATACCTATTTTATCTTTTCAAGCACAAATGATAT AATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 378 TTerm_0112 NZ_LR027880.1 685012 685018 7 685023 685029 7 4 100 0 14 28 71 28 71 0 685020 AGCAGCC GGCTGCT True ACAGATAGA TTTTGTTTT False True + AGCAGCC GAGA GGCTGCT TTTTGTTTT 68 RIL182_RS03420 intergenic 684947 685156 + down AGGCAAATTGCATTGAGTGAGATTAGAGAATGAAACGAAAGTAATATAGTGGATATACAGATAGAGCAGCCGAGAGGCTGCTTTTTGTTTTTGTGAATGAACATTAGATCTCAATATTAATATTTTTTATGAAAAAAAGTTGCATAAAAAATATTTAATGATATAATAATGATAAGTAAATAGGAAAAGTGACTTGGAGGAATGAGCCA TAGACATCCAATCAAGAAAGTATAGAGGCAAATTGCATTGAGTGAGATTAGAGAATGAAACGAAAGTAATATAGTGGATATACAGATAGAGCAGCCGAGAGGCTGCTTTTTGTTTTTGTGAATGAACATTAGATCTCAATATTAATATTTTTTATGAAAAAAAGTTGCATAAAAAATATTTAATGATATAATAATGATAAGTAAATAGGAAAAGTGACTTGGAGGAATGAGCCATGATTATAGAGGTAAGAGCAAAAAA AGGCAAATTGCATTGAGTGAGATTAGAGAATGAAACGAAAGTAATATAGTGGATATACAGATAGAGCAGCCGAGAGGCTGCT 82 TTerm_0113 NZ_LR027880.1 692783 692792 10 692801 692810 10 8 90 0 15 55 45 55 44 0 692796 AATGTGTCAG CTGACACCTT True CTGTGCTTA TTTAAGCCA False True + AATGTGTCAG GTTAAATT CTGACACCTT TTTAAGCCA 54 RIL182_RS21575 intergenic 692772 693283 + down GGCTGTGCTTAATGTGTCAGGTTAAATTCTGACACCTTTTTAAGCCACAAACAGCTCCTTGATATCATTACAATAAATGGAAATAATGCAAGTAAAAACAAAATTGAATAAATTGAAGATAAAATTCACACAATTTATCGAAAAACCGCTTATTGATTTACTTTAAAAAATATCAAAAATAGTGTTGACTTCGTAAGTTTATGATGATATTATAACTGAGCTGAAACGCGAAATACCTTGATTTGCAAGGCATGCGAATCAGAAAAATAAAAAAAGTCTTGACAAACACAAAGTTGTCTGCTAAGATGTAGAAGTTGTTTGAAATGAATAAACAATTTGAACAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATAGATATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTT TATACAGCCTGATAAATTCAACTAGGGCTGTGCTTAATGTGTCAGGTTAAATTCTGACACCTTTTTAAGCCACAAACAGCTCCTTGATATCATTACAATAAATGGAAATAATGCAAGTAAAAACAAAATTGAATAAATTGAAGATAAAATTCACACAATTTATCGAAAAACCGCTTATTGATTTACTTTAAAAAATATCAAAAATAGTGTTGACTTCGTAAGTTTATGATGATATTATAACTGAGCTGAAACGCGAAATACCTTGATTTGCAAGGCATGCGAATCAGAAAAATAAAAAAAGTCTTGACAAACACAAAGTTGTCTGCTAAGATGTAGAAGTTGTTTGAAATGAATAAACAATTTGAACAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATAGATATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTTAACATGAGAGTTTGATCCTGGCTCA GGCTGTGCTTAATGTGTCAGGTTAAATTCTGACACCTT 38 TTerm_0114 NZ_LR027880.1 698626 698634 9 698641 698649 9 6 100 0 18 66 33 66 33 0 698637 AAGACACTA TAGTGTCTT True AGGTATGGA TTTTTTATA False True + AAGACACTA TTAATT TAGTGTCTT TTTTTTATA 52 RIL182_RS03495 intergenic 698608 699052 + down TTTATACTGAGGTATGGAAGACACTATTAATTTAGTGTCTTTTTTTTATAGGATTGTGATATCAAAAGATTCTTTACAACTTAATGGCTGGTAAGTTATGTAAAACAGTGAATTTGAGAGAAAATCGCTACTGTTCAGACGCAAGCTTGACGATTGGCTGTCAAGCTATGTGCTGTAGTGTATATTGTTGTGAGATTACAGCCCCCCTGCCTCAAAGAGGTACTTTTCATGGGATGTAATTGTTGTTGGTCACATTGAAGTGCGAACAGTAACAGAAAATCTGTAAATCTTAAAATGAAACAAAAATTTTCTTGCGGCTGTCTCAACTTGTAAGTATAATATAAACATTGGAATAAAAGTTGGAGAGTAACTGGAATCAGGCGGTTGAAGCTGATTCAGACATACCACAAATATCAGAATCAGGCAGTTGGTTCTGGCGTATCA AAGAGTTCAAGTCTCTTTCTCGCTATTTATACTGAGGTATGGAAGACACTATTAATTTAGTGTCTTTTTTTTATAGGATTGTGATATCAAAAGATTCTTTACAACTTAATGGCTGGTAAGTTATGTAAAACAGTGAATTTGAGAGAAAATCGCTACTGTTCAGACGCAAGCTTGACGATTGGCTGTCAAGCTATGTGCTGTAGTGTATATTGTTGTGAGATTACAGCCCCCCTGCCTCAAAGAGGTACTTTTCATGGGATGTAATTGTTGTTGGTCACATTGAAGTGCGAACAGTAACAGAAAATCTGTAAATCTTAAAATGAAACAAAAATTTTCTTGCGGCTGTCTCAACTTGTAAGTATAATATAAACATTGGAATAAAAGTTGGAGAGTAACTGGAATCAGGCGGTTGAAGCTGATTCAGACATACCACAAATATCAGAATCAGGCAGTTGGTTCTGGCGTATCATGAATAAAGGAGAACATGTCGCGTT TTTATACTGAGGTATGGAAGACACTATTAATTTAGTGTCTT 41 TTerm_0115 NZ_LR027880.1 722924 722938 15 722944 722958 15 5 93 0 25 60 40 57 42 0 722940 TGCTATGCAAGCTAT ATAGCATGCATAGCA True GAGGCACAT GACATTTTG False True + TGCTATGCAAGCTAT TGAGC ATAGCATGCATAGCA GACATTTTG 66 RIL182_RS03595 intergenic 722837 723049 + down ACGTAAACAATGTTTTTTAACATTTGTATAAACAAGGAGTAAAATCCTGCCCAATGTGTTGGGCATTGCTCCATGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTCATATTA GAGCAATTTAGATCGCAGAAAATAAACGTAAACAATGTTTTTTAACATTTGTATAAACAAGGAGTAAAATCCTGCCCAATGTGTTGGGCATTGCTCCATGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTCATATTATGAAAAAAAGAGTACTTACCACAAT ACGTAAACAATGTTTTTTAACATTTGTATAAACAAGGAGTAAAATCCTGCCCAATGTGTTGGGCATTGCTCCATGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCA 121 TTerm_0116 NZ_LR027880.1 743314 743326 13 743334 743346 13 7 92 0 21 50 50 50 50 0 743329 AAAAGGCAGGCTG CAGCCTGTCTTTT True TAAAAAAGA TTAATGCTT True True + AAAAGGCAGGCTG TGTTTTG CAGCCTGTCTTTT TTAATGCTT 74 RIL182_RS03695 intergenic 743256 743354 + down TGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTTTTAATGCT ACAGCCGGTACTGCAGGAGCCATGATGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTTTTAATGCTTAAGCGTTTTGGGACGCCTCTAATG TGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTT 90 TTerm_0117 NZ_LR027880.1 743314 743326 13 743334 743346 13 7 92 0 21 50 50 50 50 0 743329 AAAAGGCAGGCTG CAGCCTGTCTTTT True TAAAAAAGA TTAATGCTT True True + AAAAGGCAGGCTG TGTTTTG CAGCCTGTCTTTT TTAATGCTT 74 RIL182_RS03700 intergenic 743256 743354 - down AGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTTTCTTTTTTACGATGACTAAATATTCACGAAACATACATTCCATGCTTCCCCTTTTTCA CATTAGAGGCGTCCCAAAACGCTTAAGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTTTCTTTTTTACGATGACTAAATATTCACGAAACATACATTCCATGCTTCCCCTTTTTCATCATGGCTCCTGCAGTACCGGCTGT TGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTT 90 TTerm_0118 NZ_LR027880.1 747973 747987 15 747992 748006 15 4 80 0 15 56 43 58 41 0 747989 CAAAGCATGGGATAA TTGTCCTGTGCTTTG True AAGCATAGC TTTTTGCAG False True + CAAAGCATGGGATAA AATA TTGTCCTGTGCTTTG TTTTTGCAG 54 RIL182_RS03710 intergenic 747939 748164 + down AATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCA TGCGATTGTGAACAGTATGGTATAAAATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCATGGATCATTTCAAATTACATTCAAA AATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTG 67 TTerm_0119 NZ_LR027880.1 748016 748026 11 748031 748041 11 4 81 0 12 72 27 77 22 0 748028 AAAAACAGAAC GTTCGATTTTT True TTTTGCAGA GCTGTACAA True True + AAAAACAGAAC AAAA GTTCGATTTTT GCTGTACAA 48 RIL182_RS03710 intergenic 747939 748164 + down AATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCA TGCGATTGTGAACAGTATGGTATAAAATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCATGGATCATTTCAAATTACATTCAAA AATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTT 102 TTerm_0120 NZ_LR027880.1 753087 753111 25 753121 753145 25 9 84 0 30 62 38 66 33 0 753115 ATGTATAGAGGAAAAGAAGTGGCTG CAGCCACTTCTTTTGCGTTATAAAT True AGTTATATA CCGTATGGA True True + ATGTATAGAGGAAAAGAAGTGGCTG TAGAAAAGG CAGCCACTTCTTTTGCGTTATAAAT CCGTATGGA 92 RIL182_RS03720 intergenic 753072 753163 + down AACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAATCCGTATGGAATGAATCAT GAAGTATTTAGAGAAGGATAAATAAAACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAATCCGTATGGAATGAATCATTATTTTTTTGTTCGAATGATATCAA AACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAAT 73 TTerm_0121 NZ_LR027880.1 753087 753111 25 753121 753145 25 9 84 0 30 62 38 66 33 0 753115 ATGTATAGAGGAAAAGAAGTGGCTG CAGCCACTTCTTTTGCGTTATAAAT True AGTTATATA CCGTATGGA True True + ATGTATAGAGGAAAAGAAGTGGCTG TAGAAAAGG CAGCCACTTCTTTTGCGTTATAAAT CCGTATGGA 92 RIL182_RS03725 intergenic 753072 753163 - down ATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACATATATAACTTCCGTT TTGATATCATTCGAACAAAAAAATAATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACATATATAACTTCCGTTTTATTTATCCTTCTCTAAATACTTC AACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAAT 73 TTerm_0122 NZ_LR027880.1 756701 756713 13 756722 756734 13 8 84 0 16 92 7 90 9 0 756717 AAATAAAAAAGAA TTCTTATTTTTTT True AACAAAATA TAAAAATGC True True + AAATAAAAAAGAA TGAAGATT TTCTTATTTTTTT TAAAAATGC 40 RIL182_RS03740 intergenic 756485 756902 + down AAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAA AGGTTGGTTTATAGAAGGAGTTTAAAAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAATGATGAGTACAGATATTGGTATCGA AAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTT 249 TTerm_0123 NZ_LR027880.1 766912 766936 25 766945 766970 26 8 76 3 15 60 39 65 35 0 766940 TTTCTTATAAGAGAAGAGCAGGGCC GGTCCTGCTTTTTTATTCATAAGGAA True AAGATGCGT TTACGTCCT False True + TTTCTTATAAGAGAAGAGCAGGGCC TGACAGGT GGTCCTGCTTTTTTATTCATAAGGAA TTACGTCCT 62 RIL182_RS03790 intergenic 766921 767208 + down GAGAAGAGCAGGGCCTGACAGGTGGTCCTGCTTTTTTATTCATAAGGAATTACGTCCTATGAATAAAAAAGCCCTCCGGGTGGGATCGCACTGCGTCAGAGATGAATTATGTCGCGGGGGCGACCCGCCGCAGGCGGTGAATCCTGTGGAACAGGATTCTTTTTTTCCTTTGAAAAAGAAGGGCACTGTGATATAATGAAAAATAAGAATGCGTAACTGCGAGCAAAAATGCAGTTTGCTAAGAGAAAGGAAACGCAGCATGGTCAATGAACAACGACTGCACAGCA CGGAAACAAGATGCGTTTCTTATAAGAGAAGAGCAGGGCCTGACAGGTGGTCCTGCTTTTTTATTCATAAGGAATTACGTCCTATGAATAAAAAAGCCCTCCGGGTGGGATCGCACTGCGTCAGAGATGAATTATGTCGCGGGGGCGACCCGCCGCAGGCGGTGAATCCTGTGGAACAGGATTCTTTTTTTCCTTTGAAAAAGAAGGGCACTGTGATATAATGAAAAATAAGAATGCGTAACTGCGAGCAAAAATGCAGTTTGCTAAGAGAAAGGAAACGCAGCATGGTCAATGAACAACGACTGCACAGCATGATAAAAATAGCAAAATTTGATGC GAGAAGAGCAGGGCCTGACAGGTGGTCCTGCTTTTTTATTCATAAGGAA 49 TTerm_0124 NZ_LR027880.1 776317 776322 6 776328 776333 6 5 100 0 12 33 66 33 66 0 776324 CCTCTG CAGAGG True AGGAAAATC GCAAATTTT True True + CCTCTG CTCAC CAGAGG GCAAATTTT 56 RIL182_RS03835 intergenic 776233 776390 + down GAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAA TGAGGATATGTATCAGAACAGGTAAGAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAATGAAGGGTATTATTTTAGCAGGTGG GAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGG 100 TTerm_0125 NZ_LR027880.1 776337 776343 7 776349 776355 7 5 100 0 14 100 0 100 0 0 776345 AATTTTA TAAAATT True AGAGGGCAA GCATTTTGC False True + AATTTTA CATGA TAAAATT GCATTTTGC 28 RIL182_RS03835 intergenic 776233 776390 + down GAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAA TGAGGATATGTATCAGAACAGGTAAGAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAATGAAGGGTATTATTTTAGCAGGTGG GAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATT 122 TTerm_0126 NZ_LR027880.1 790249 790264 16 790269 790284 16 4 93 0 27 65 34 66 33 0 790266 GTGCGAAAAATAAGCT AGCTTATTTTTTGCAC True AAGGATTAG GGCTATTTG True True + GTGCGAAAAATAAGCT CGAT AGCTTATTTTTTGCAC GGCTATTTG 70 RIL182_RS03895 intergenic 790241 790387 + down AGGATTAGTGCGAAAAATAAGCTCGATAGCTTATTTTTTGCACGGCTATTTGTTTCTAAATAAAAACAAATAGCTTTGATGGCAGACGAGAATTTGAGATTCTCGTCGCCTCTTCTCAGCAAGTTGCTCAAAAATGAGGATGAATA TTCGTATGTATTATCACAGAAATAAAGGATTAGTGCGAAAAATAAGCTCGATAGCTTATTTTTTGCACGGCTATTTGTTTCTAAATAAAAACAAATAGCTTTGATGGCAGACGAGAATTTGAGATTCTCGTCGCCTCTTCTCAGCAAGTTGCTCAAAAATGAGGATGAATATGAAAAAGAAGATTTTATTTAACGG AGGATTAGTGCGAAAAATAAGCTCGATAGCTTATTTTTTGCAC 43 TTerm_0127 NZ_LR027880.1 803403 803418 16 803428 803443 16 9 87 0 22 37 62 35 64 0 803422 ATACCCCGGTGGGATG CATCCTGCCGGGGTAT True AAAAAGAGA TTTTAAGAT True True + ATACCCCGGTGGGATG ATCATCATA CATCCTGCCGGGGTAT TTTTAAGAT 68 RIL182_RS03940 intergenic 803390 803543 + down AAGTAAAAAGAGATACCCCGGTGGGATGATCATCATACATCCTGCCGGGGTATTTTTAAGATTTTATGAAAATTCTGGTAAGATATATTCAAAGGTTGGGTTTTATGATAAAATAATATAGATTATGCAAAGGTATGAATGTGAGGTACTTCA TTCCGTAAAGACAAAAGCAAAATAAAAGTAAAAAGAGATACCCCGGTGGGATGATCATCATACATCCTGCCGGGGTATTTTTAAGATTTTATGAAAATTCTGGTAAGATATATTCAAAGGTTGGGTTTTATGATAAAATAATATAGATTATGCAAAGGTATGAATGTGAGGTACTTCATGAGGAAAAGGGAAAGATATAAACA AAGTAAAAAGAGATACCCCGGTGGGATGATCATCATACATCCTGCCGGGGTAT 53 TTerm_0128 NZ_LR027880.1 810402 810418 17 810426 810442 17 7 82 0 19 50 50 50 50 0 810421 ATCCCTGGTTTTGCCTG CAGGAAAAACAGGGGAT True AAAATATAA ATCCATTTT True True + ATCCCTGGTTTTGCCTG TGAATTT CAGGAAAAACAGGGGAT ATCCATTTT 62 RIL182_RS03955 intergenic 810361 810530 + down TCCTTGGCTTAAAGACAGAGATTTTGCTTTTAAAAATATAATCCCTGGTTTTGCCTGTGAATTTCAGGAAAAACAGGGGATATCCATTTTCAATATAAAATCCCACAAAAAATCAAGTGTTTAACGGACAAAAGAAAAAGAAAATCTATTCCATTGTTCAACATTGTCA ATATTCGGTCTTTCTCAGAAAGTAATCCTTGGCTTAAAGACAGAGATTTTGCTTTTAAAAATATAATCCCTGGTTTTGCCTGTGAATTTCAGGAAAAACAGGGGATATCCATTTTCAATATAAAATCCCACAAAAAATCAAGTGTTTAACGGACAAAAGAAAAAGAAAATCTATTCCATTGTTCAACATTGTCATGCCGGTACTGCTTTTTCTGATGCC TCCTTGGCTTAAAGACAGAGATTTTGCTTTTAAAAATATAATCCCTGGTTTTGCCTGTGAATTTCAGGAAAAACAGGGGAT 81 TTerm_0129 NZ_LR027880.1 858398 858405 8 858410 858417 8 4 100 0 16 37 62 37 62 0 858407 AGGCACTC GAGTGCCT True AACAGAATA TATTTTAAT False True + AGGCACTC TGTG GAGTGCCT TATTTTAAT 64 RIL182_RS04150 intergenic 858399 858445 + down GCACTCTGTGGAGTGCCTTATTTTAATGAAAGGTTGAAAATAAAAA AATTGAAGAATTTATAACAGAATAGGCACTCTGTGGAGTGCCTTATTTTAATGAAAGGTTGAAAATAAAAATGCAAAATGTAGGAACCGTGATATG GCACTCTGTGGAGTGCCT 18 TTerm_0130 NZ_LR027880.1 860623 860636 14 860641 860654 14 4 85 0 18 42 57 41 58 0 860638 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS04165 intergenic 860354 860653 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACCTTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACCTTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTCATGAAAATTTACGTAGGCATTGATA GAGGTTGTACCTCCCTTTCCTAAAGTCTGATACCATGATGTCCACCAACGATTATCATCGTAGACTTGATAGAAATAAGTACTCTGAGTGAAAAACACTCCGGCAACATCCAGCTAATAAACAATTCAGATAAAGGTAGTGGCAATACACTCCAGTTGAGTAGTCAAGCTACAGAAAACAAATCAAAAGTCCATAGTATCTGAATTGTATTGAACCACGATATTAAAAGAAAGGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 300 TTerm_0131 NZ_LR027880.1 863327 863340 14 863345 863358 14 4 85 0 18 42 57 41 58 0 863342 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS04180 intergenic 863130 863357 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCGTAAGTACGTAATCATTCGTATCTGTCAGCAACTATATTTTTCTGATACACTCTTTTCATAACAAAGAAAGGAAACTGTATCATT GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCGTAAGTACGTAATCATTCGTATCTGTCAGCAACTATATTTTTCTGATACACTCTTTTCATAACAAAGAAAGGAAACTGTATCATTATGAAAACAGATGAAAAAATCACGC AATGATACAGTTTCCTTTCTTTGTTATGAAAAGAGTGTATCAGAAAAATATAGTTGCTGACAGATACGAATGATTACGTACTTACGAGTAGTCAAGCTACAGAAAACAAATCAAAAGTCCATAGTATCTGAATTGTATTGAACCACGATATTAAAAGAAAGGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 228 TTerm_0132 NZ_LR027880.1 873325 873334 10 873343 873352 10 8 90 0 15 25 75 22 77 0 873338 TCCCGTGGTG CACCGCGGGA True GACATACTT TTTTTTTGT False True + TCCCGTGGTG AGATATGA CACCGCGGGA TTTTTTTGT 70 RIL182_RS04220 intergenic 873107 873481 + down ACATAATTTCTTCCCCAGCCCCCTTGACAACCCCACCCCCTCAAGCGTATACTTGCAAAGTAATCTAAAATTTTGAAGAAAGAGAGGTAAAAGTAATGATTAGATTAACAAATGTTACAATCAACGAACTGCATAATCATCATACAATTACCTCGGTTAATTCTGTTACGCTGGCATAAATTCATGCAAAAGTAAATAGAATGTTTTTTGACATACTTCCCGTGGTGAGATATGACACCGCGGGATTTTTTTGTGCTAAGGGGGCTGCTTGTGAAGCGTGCAGGCGGCTGTCAGAGTGGTGCGTCACGGTACAAAAATATGTCAGAGACCGGGGAGTGTAAGAGGGGAAAGTAAGGAGGAATCACAAGAATTTA TGGAATAGAGGAGTTTGCCGGATAAACATAATTTCTTCCCCAGCCCCCTTGACAACCCCACCCCCTCAAGCGTATACTTGCAAAGTAATCTAAAATTTTGAAGAAAGAGAGGTAAAAGTAATGATTAGATTAACAAATGTTACAATCAACGAACTGCATAATCATCATACAATTACCTCGGTTAATTCTGTTACGCTGGCATAAATTCATGCAAAAGTAAATAGAATGTTTTTTGACATACTTCCCGTGGTGAGATATGACACCGCGGGATTTTTTTGTGCTAAGGGGGCTGCTTGTGAAGCGTGCAGGCGGCTGTCAGAGTGGTGCGTCACGGTACAAAAATATGTCAGAGACCGGGGAGTGTAAGAGGGGAAAGTAAGGAGGAATCACAAGAATTTATGAAAAAGTTACATACATATATCGG ACATAATTTCTTCCCCAGCCCCCTTGACAACCCCACCCCCTCAAGCGTATACTTGCAAAGTAATCTAAAATTTTGAAGAAAGAGAGGTAAAAGTAATGATTAGATTAACAAATGTTACAATCAACGAACTGCATAATCATCATACAATTACCTCGGTTAATTCTGTTACGCTGGCATAAATTCATGCAAAAGTAAATAGAATGTTTTTTGACATACTTCCCGTGGTGAGATATGACACCGCGGGA 245 TTerm_0133 NZ_LR027880.1 892165 892179 15 892187 892201 15 7 100 0 30 60 40 60 40 0 892182 ACAAAAGAAGCCTTC GAAGGCTTCTTTTGT True TTTGGGATA CAGGTAAAG True True + ACAAAAGAAGCCTTC ATAAAAA GAAGGCTTCTTTTGT CAGGTAAAG 92 RIL182_RS04290 intergenic 892156 892224 + down TTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGTCAGGTAAAGACAGGCAGGGAGGT ATACAGAAAAAATGAAACATTTTAGTTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGTCAGGTAAAGACAGGCAGGGAGGTTAGCCCATCGTTACTTCTACATTTA TTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGT 45 TTerm_0134 NZ_LR027880.1 892165 892179 15 892187 892201 15 7 100 0 30 60 40 60 40 0 892182 ACAAAAGAAGCCTTC GAAGGCTTCTTTTGT True TTTGGGATA CAGGTAAAG True True + ACAAAAGAAGCCTTC ATAAAAA GAAGGCTTCTTTTGT CAGGTAAAG 92 RIL182_RS04295 intergenic 892156 892224 - down ACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTGTATCCCAAA TAAATGTAGAAGTAACGATGGGCTAACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTGTATCCCAAACTAAAATGTTTCATTTTTTCTGTAT TTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGT 45 TTerm_0135 NZ_LR027880.1 904504 904517 14 904522 904535 14 4 92 0 23 46 53 46 53 0 904519 GCCCTTTGTATTCC GGAATACGAAGGGC True TCATATTCG TTTTTTTAA False True + GCCCTTTGTATTCC GTAT GGAATACGAAGGGC TTTTTTTAA 62 RIL182_RS04320 intergenic 904189 904613 + down AAAAACAGTTGACAAACCCCGCGTCCCCTCGTATGATAAAAACAGCAAAAAACAAAGGTTGTGAGAAAGAGGAGTACACATAAACTCTTTGCAGAGAGGGAAGTTCACCGGCTGAAAGACATCCCAGAGAAAGATATGTGGAAGGTAGCTTTTGAACCGGAATGCTGAGAAAGCATAGCTGTATGACAGGATATAAGAACAGGCATTGCAGATATGCACAGGTATTCACGACTCATCCACGTTACAGGATGACCGGTCAGATATGGAACTGGCTGGACATGAGCACCAACAAAGGTGGTACCGCGATCATATTCGCCCTTTGTATTCCGTATGGAATACGAAGGGCTTTTTTTAATTCATAGGAAATTATGTCCTGTGAATCAAAACCGCCTATCTATCAGAACTAAAAAAGGAGAACAGATTA GAGTATGGTGGAGGAAGAGATCTAAAAAAACAGTTGACAAACCCCGCGTCCCCTCGTATGATAAAAACAGCAAAAAACAAAGGTTGTGAGAAAGAGGAGTACACATAAACTCTTTGCAGAGAGGGAAGTTCACCGGCTGAAAGACATCCCAGAGAAAGATATGTGGAAGGTAGCTTTTGAACCGGAATGCTGAGAAAGCATAGCTGTATGACAGGATATAAGAACAGGCATTGCAGATATGCACAGGTATTCACGACTCATCCACGTTACAGGATGACCGGTCAGATATGGAACTGGCTGGACATGAGCACCAACAAAGGTGGTACCGCGATCATATTCGCCCTTTGTATTCCGTATGGAATACGAAGGGCTTTTTTTAATTCATAGGAAATTATGTCCTGTGAATCAAAACCGCCTATCTATCAGAACTAAAAAAGGAGAACAGATTATGTGTCAGAATTGCAGTAAAGAATT AAAAACAGTTGACAAACCCCGCGTCCCCTCGTATGATAAAAACAGCAAAAAACAAAGGTTGTGAGAAAGAGGAGTACACATAAACTCTTTGCAGAGAGGGAAGTTCACCGGCTGAAAGACATCCCAGAGAAAGATATGTGGAAGGTAGCTTTTGAACCGGAATGCTGAGAAAGCATAGCTGTATGACAGGATATAAGAACAGGCATTGCAGATATGCACAGGTATTCACGACTCATCCACGTTACAGGATGACCGGTCAGATATGGAACTGGCTGGACATGAGCACCAACAAAGGTGGTACCGCGATCATATTCGCCCTTTGTATTCCGTATGGAATACGAAGGGC 346 TTerm_0136 NZ_LR027880.1 910761 910773 13 910780 910792 13 6 100 0 26 69 30 69 30 0 910776 AAAAGACGTCTAA TTAGACGTCTTTT True GATGATACA TTTATTCAT True True + AAAAGACGTCTAA GTGATA TTAGACGTCTTTT TTTATTCAT 68 RIL182_RS04335 intergenic 910728 910865 + down AAATCATTATAAAAATTAAATAAAGATGATACAAAAGACGTCTAAGTGATATTAGACGTCTTTTTTTATTCATAGGGTATTGAAAGCAAAAGGTGACTTTTAAACCAATTAAAAAAGTAACAGGAAAGGAGCATTTA GAATTACATCAATATTGAAGAGTAAAAATCATTATAAAAATTAAATAAAGATGATACAAAAGACGTCTAAGTGATATTAGACGTCTTTTTTTATTCATAGGGTATTGAAAGCAAAAGGTGACTTTTAAACCAATTAAAAAAGTAACAGGAAAGGAGCATTTATGGAAGAAAAGTATCAGTTAAAAGA AAATCATTATAAAAATTAAATAAAGATGATACAAAAGACGTCTAAGTGATATTAGACGTCTTTT 64 TTerm_0137 NZ_LR027880.1 918896 918914 19 918923 918941 19 8 84 0 23 71 28 75 25 0 918918 AAAAGGGGGTGTGAAAAAT ATTTTTCATACTTCCTTTT True TAAATGAGA TCTGGTTAA True True + AAAAGGGGGTGTGAAAAAT GATTTTTT ATTTTTCATACTTCCTTTT TCTGGTTAA 46 RIL182_RS04380 intergenic 918848 919069 + down ATCAATAAAATAAATGTTTTGGGAACCTTTCTGTCACCCTAAATGAGAAAAGGGGGTGTGAAAAATGATTTTTTATTTTTCATACTTCCTTTTTCTGGTTAAATGAAAAAATATACTGTATATTGTCGAATTTTGAGTTATAATAGATAATAAGTTTGTATTCAGGCTTGTCAGGAATGAGAATATTGTTTTTATAAAAAAGCACGAAATGGGGAATGGTA AGATTTAGCAGAGATCCTTGGATAAATCAATAAAATAAATGTTTTGGGAACCTTTCTGTCACCCTAAATGAGAAAAGGGGGTGTGAAAAATGATTTTTTATTTTTCATACTTCCTTTTTCTGGTTAAATGAAAAAATATACTGTATATTGTCGAATTTTGAGTTATAATAGATAATAAGTTTGTATTCAGGCTTGTCAGGAATGAGAATATTGTTTTTATAAAAAAGCACGAAATGGGGAATGGTATGGAAAGAATCTGGAATTTTTTTGA ATCAATAAAATAAATGTTTTGGGAACCTTTCTGTCACCCTAAATGAGAAAAGGGGGTGTGAAAAATGATTTTTTATTTTTCATACTTCCTTTT 93 TTerm_0138 NZ_LR027880.1 922291 922306 16 922314 922329 16 7 81 0 17 59 40 61 38 0 922309 GAGATCACCCATGTTA TAACATATGTGGTCTC True TGTTTCAGG TTTTTGTTA False True + GAGATCACCCATGTTA AAAAAAA TAACATATGTGGTCTC TTTTTGTTA 42 RIL182_RS04390 intergenic 922175 922433 + down AGATAGAACTGCATAAAATAAGTGTCGGAATTTACTCAAATTTTTCCTACTTTGGACATTGGTTTTTACAACGGTATTGTATAGTGAAGCAGAGGAAAAACAAAACATGTTTCAGGAGATCACCCATGTTAAAAAAAATAACATATGTGGTCTCTTTTTGTTATATCTTTTGCTGGAAAATGATGTTTCGTATGTTTACAATAAAGTATGAAAAGTATGAAATGTATGAGAACACGAGAGGAGATGGGAGGAAAAACA TTATGATGTTGATGAAATCTCATAAAGATAGAACTGCATAAAATAAGTGTCGGAATTTACTCAAATTTTTCCTACTTTGGACATTGGTTTTTACAACGGTATTGTATAGTGAAGCAGAGGAAAAACAAAACATGTTTCAGGAGATCACCCATGTTAAAAAAAATAACATATGTGGTCTCTTTTTGTTATATCTTTTGCTGGAAAATGATGTTTCGTATGTTTACAATAAAGTATGAAAAGTATGAAATGTATGAGAACACGAGAGGAGATGGGAGGAAAAACATGCTTTCAGATAATATACAGTTACT AGATAGAACTGCATAAAATAAGTGTCGGAATTTACTCAAATTTTTCCTACTTTGGACATTGGTTTTTACAACGGTATTGTATAGTGAAGCAGAGGAAAAACAAAACATGTTTCAGGAGATCACCCATGTTAAAAAAAATAACATATGTGGTCTC 154 TTerm_0139 NZ_LR027880.1 924628 924642 15 924647 924661 15 4 93 0 25 30 70 28 71 0 924644 ATGCCCCCGGAGAGC GCTCTTCGGGGGCAT True ATGAGAGGA TTTTGTGCG False True + ATGCCCCCGGAGAGC GAAA GCTCTTCGGGGGCAT TTTTGTGCG 74 RIL182_RS04410 intergenic 924616 924843 + down CAGATGAGAGGATGCCCCCGGAGAGCGAAAGCTCTTCGGGGGCATTTTTGTGCGTAAGAAGATTTTTACAGGTTGTATATGAGAAATGAATGTTGTATAGTATCTGCAAGAAATATCTTCTTTCGTGAATGTTATAAATGTTGGTTTCGTTACTTTCATTATATAACAATTGGATTTAAAGGGGATTATAATGACGCGGTAAAAAACAAAGGAGAAGGAAATAAACA ACGATACATATCCATTGAGGGATAACAGATGAGAGGATGCCCCCGGAGAGCGAAAGCTCTTCGGGGGCATTTTTGTGCGTAAGAAGATTTTTACAGGTTGTATATGAGAAATGAATGTTGTATAGTATCTGCAAGAAATATCTTCTTTCGTGAATGTTATAAATGTTGGTTTCGTTACTTTCATTATATAACAATTGGATTTAAAGGGGATTATAATGACGCGGTAAAAAACAAAGGAGAAGGAAATAAACATGAGAATTTTTTTGGCGGAAGATGA CAGATGAGAGGATGCCCCCGGAGAGCGAAAGCTCTTCGGGGGCAT 45 TTerm_0140 NZ_LR027880.1 932880 932885 6 932890 932895 6 4 100 0 12 50 50 50 50 0 932887 TCTGCT AGCAGA True GAAAATCCT TAAATTTTA True True + TCTGCT CGTC AGCAGA TAAATTTTA 48 RIL182_RS04440 intergenic 932537 932952 + down TCTGTGGCAGACCTCTTTGATGCAGTCGTTTAAACAATAGGGAAGTATGTGAACGGTCGATCTGCGAGGCATTAAAAGCCGGATACCGGTTGATTGACATGGTGGAAGCATATGGAAATGAAAGAGCGGGCAGGCAATGACCTGGTAAAAAGAATCTTTTACGCCATGTTTTGTGTACAATGCATAAAAATATGGCGTTTATTTTGTCTAAAACTTCCAACATGCAAAACAGTTTATGCAAAAAAAGTGCAGATTGTGAAGATTTTTACCAAAGGACGTGTGGTATGGTAGGATACAGTTACAAGATCCGAAACGGATAAAGAAAACAAGGGAGGAAAATCCTCTGCTCGTCAGCAGATAAATTTTACATTGTAAAATTGCATTTTCCTTCGGAAAACAAGGGAGGATTTAGAAA CCTGATCCCGATGCGGGAAAACTGATCTGTGGCAGACCTCTTTGATGCAGTCGTTTAAACAATAGGGAAGTATGTGAACGGTCGATCTGCGAGGCATTAAAAGCCGGATACCGGTTGATTGACATGGTGGAAGCATATGGAAATGAAAGAGCGGGCAGGCAATGACCTGGTAAAAAGAATCTTTTACGCCATGTTTTGTGTACAATGCATAAAAATATGGCGTTTATTTTGTCTAAAACTTCCAACATGCAAAACAGTTTATGCAAAAAAAGTGCAGATTGTGAAGATTTTTACCAAAGGACGTGTGGTATGGTAGGATACAGTTACAAGATCCGAAACGGATAAAGAAAACAAGGGAGGAAAATCCTCTGCTCGTCAGCAGATAAATTTTACATTGTAAAATTGCATTTTCCTTCGGAAAACAAGGGAGGATTTAGAAATGTTAGCAATTAACATGGATGACGT TCTGTGGCAGACCTCTTTGATGCAGTCGTTTAAACAATAGGGAAGTATGTGAACGGTCGATCTGCGAGGCATTAAAAGCCGGATACCGGTTGATTGACATGGTGGAAGCATATGGAAATGAAAGAGCGGGCAGGCAATGACCTGGTAAAAAGAATCTTTTACGCCATGTTTTGTGTACAATGCATAAAAATATGGCGTTTATTTTGTCTAAAACTTCCAACATGCAAAACAGTTTATGCAAAAAAAGTGCAGATTGTGAAGATTTTTACCAAAGGACGTGTGGTATGGTAGGATACAGTTACAAGATCCGAAACGGATAAAGAAAACAAGGGAGGAAAATCCTCTGCTCGTCAGCAGA 358 TTerm_0141 NZ_LR027880.1 936501 936521 21 936526 936546 21 4 80 0 22 66 33 70 29 0 936523 AAAAAGCATGTTTTACGATTC GAATTGCAGAGCATGCTTTTT True GCACATATA TTGTTGTAT True True + AAAAAGCATGTTTTACGATTC AAAA GAATTGCAGAGCATGCTTTTT TTGTTGTAT 60 RIL182_RS04455 intergenic 936466 936655 + down AAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAG CCCGGAAGGGGAAGCGAAAGCGTAAAAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAGTGACAAAACAAGTAGAAGGAGTTTC AAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTT 80 TTerm_0142 NZ_LR027880.1 936522 936529 8 936538 936545 8 8 87 0 11 81 18 85 14 0 936533 AAAAGAAT ATGCTTTT True TACGATTCA TTTGTTGTA False True + AAAAGAAT TGCAGAGC ATGCTTTT TTTGTTGTA 38 RIL182_RS04455 intergenic 936466 936655 + down AAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAG CCCGGAAGGGGAAGCGAAAGCGTAAAAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAGTGACAAAACAAGTAGAAGGAGTTTC AAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTT 79 TTerm_0143 NZ_LR027880.1 945610 945628 19 945635 945653 19 6 89 0 28 57 42 58 41 0 945631 AAAAACACCATGGACATGC GCATGTTCGTGGTGTTTTT True TTGTTATGA GGTTATACT True True + AAAAACACCATGGACATGC AAAATC GCATGTTCGTGGTGTTTTT GGTTATACT 80 RIL182_RS04495 intergenic 945543 945762 + down GTAGTTGCGTCAGGGTTTCCGATGAAAAAACAGATTGCACGCACTACGGGCAGACTGATTGTTATGAAAAACACCATGGACATGCAAAATCGCATGTTCGTGGTGTTTTTGGTTATACTAAAAATAAGTGACAGGTCAGGTGTCCTGTGTTAATATGGAACAGAAAGAACGGAATGTAACACGCCAGACCGGCGTCGTTCTGAAAATGGAGGACGACTA TGGCTGGACAGTAGAGGTAAAATAAGTAGTTGCGTCAGGGTTTCCGATGAAAAAACAGATTGCACGCACTACGGGCAGACTGATTGTTATGAAAAACACCATGGACATGCAAAATCGCATGTTCGTGGTGTTTTTGGTTATACTAAAAATAAGTGACAGGTCAGGTGTCCTGTGTTAATATGGAACAGAAAGAACGGAATGTAACACGCCAGACCGGCGTCGTTCTGAAAATGGAGGACGACTATGAGTAAAACATTAGAACAATTCGA GTAGTTGCGTCAGGGTTTCCGATGAAAAAACAGATTGCACGCACTACGGGCAGACTGATTGTTATGAAAAACACCATGGACATGCAAAATCGCATGTTCGTGGTGTTTTT 110 TTerm_0144 NZ_LR027880.1 960163 960182 20 960191 960210 20 8 85 0 25 60 40 58 41 0 960186 AAACATCAGAGGCATCAAGA TCTTGACGCCTCTGTTTTTT True AGCAGTAAA GCCCCAGAA True True + AAACATCAGAGGCATCAAGA GACAAGAA TCTTGACGCCTCTGTTTTTT GCCCCAGAA 66 RIL182_RS04540 intergenic 960155 960325 + down GCAGTAAAAACATCAGAGGCATCAAGAGACAAGAATCTTGACGCCTCTGTTTTTTGCCCCAGAATCTTTGTCATACATTGTTGACAAGGAAACAAACTTGCGCTATATTAAAACAGAAGTAATTGTTGACAAGGAAACAATATTTGCTTTTATGTAAGGGAGTGGATGTA GGCAGGATTTCACTTTGACGCGTAAGCAGTAAAAACATCAGAGGCATCAAGAGACAAGAATCTTGACGCCTCTGTTTTTTGCCCCAGAATCTTTGTCATACATTGTTGACAAGGAAACAAACTTGCGCTATATTAAAACAGAAGTAATTGTTGACAAGGAAACAATATTTGCTTTTATGTAAGGGAGTGGATGTATGAAAGAGCAGGAACTTCTGTTAAA GCAGTAAAAACATCAGAGGCATCAAGAGACAAGAATCTTGACGCCTCTGTTTTTT 55 TTerm_0145 NZ_LR027880.1 978165 978176 12 978183 978194 12 6 91 0 19 45 54 45 54 0 978179 AAAGTCCTGGCA TGCCGGGACTTT True GAAAAGTGA TAAGATTCA True True + AAAGTCCTGGCA GTTATT TGCCGGGACTTT TAAGATTCA 78 RIL182_RS04625 intergenic 978145 978220 + down GATCTGTTGAAGAAAAGTGAAAGTCCTGGCAGTTATTTGCCGGGACTTTTAAGATTCATAGGAAATTACGTCCTA TGGTAAAAATAAAATAACAGAATAAGATCTGTTGAAGAAAAGTGAAAGTCCTGGCAGTTATTTGCCGGGACTTTTAAGATTCATAGGAAATTACGTCCTATGAATCTTAAAGCCCTCCGGGCGGG GATCTGTTGAAGAAAAGTGAAAGTCCTGGCAGTTATTTGCCGGGACTTT 49 TTerm_0146 NZ_LR027880.1 980036 980053 18 980060 980077 18 6 94 0 31 63 36 64 35 0 980056 AAAAAATGAGGAACCTGT ACAGGTTCCTCGTTTTTT True TAATGAATA GTGCTTTTT True True + AAAAAATGAGGAACCTGT TTCGTG ACAGGTTCCTCGTTTTTT GTGCTTTTT 86 RIL182_RS04635 intergenic 980005 980094 + down AAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTTGTGCTTTTTGAGTTTGT AGAGAAATATCCGCTGGAGAGATAAAAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTTGTGCTTTTTGAGTTTGTTATTTTATATCATCTGCAATACGGT AAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTT 72 TTerm_0147 NZ_LR027880.1 980036 980053 18 980060 980077 18 6 94 0 31 63 36 64 35 0 980056 AAAAAATGAGGAACCTGT ACAGGTTCCTCGTTTTTT True TAATGAATA GTGCTTTTT True True + AAAAAATGAGGAACCTGT TTCGTG ACAGGTTCCTCGTTTTTT GTGCTTTTT 86 RIL182_RS04640 intergenic 980005 980094 - down ACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTTTATTCATTATTAAATTATATTCTATTCTCTT ACCGTATTGCAGATGATATAAAATAACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTTTATTCATTATTAAATTATATTCTATTCTCTTTTATCTCTCCAGCGGATATTTCTCT AAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTT 72 TTerm_0148 NZ_LR027880.1 991552 991566 15 991576 991590 15 9 100 0 30 73 26 73 26 0 991570 AAAAAAGCTTACATG CATGTAAGCTTTTTT True TGAGATCAA ACGCTTTCA True True + AAAAAAGCTTACATG TCAAAAGGG CATGTAAGCTTTTTT ACGCTTTCA 76 RIL182_RS04685 intergenic 991532 991690 + down GAACGGAAAAGTGAGATCAAAAAAAGCTTACATGTCAAAAGGGCATGTAAGCTTTTTTACGCTTTCAAGTACGAAAGTACGATTGACGGGGATAAACTGTTACATTAACATAAAAAATGCGCGTGACAATGTGCAATAAATCAGAAGGAGAAAAGTTA AGATGTAAAAGTTACAAAGTGTTAAGAACGGAAAAGTGAGATCAAAAAAAGCTTACATGTCAAAAGGGCATGTAAGCTTTTTTACGCTTTCAAGTACGAAAGTACGATTGACGGGGATAAACTGTTACATTAACATAAAAAATGCGCGTGACAATGTGCAATAAATCAGAAGGAGAAAAGTTATGAAAAGAAAGAGACTCACGGGTTG GAACGGAAAAGTGAGATCAAAAAAAGCTTACATGTCAAAAGGGCATGTAAGCTTTTTT 58 TTerm_0149 NZ_LR027880.1 995523 995538 16 995544 995559 16 5 93 0 27 59 40 60 40 0 995540 AAAAACCGGAAGAAGC GCTTTTTCCGGTTTTT True ATAATAATA GTCATAGAA True True + AAAAACCGGAAGAAGC GGATT GCTTTTTCCGGTTTTT GTCATAGAA 70 RIL182_RS04695 intergenic 995507 995635 + down TTTTGCAATAATAATAAAAACCGGAAGAAGCGGATTGCTTTTTCCGGTTTTTGTCATAGAAAGTAAGTTGCTTTTTACAGATAAAGTAAGTATACTGATAAACAATAAAAAGAGATGGAGAAGGAATA AGTGAAAATTAAAGTAAAAAAATAATTTTGCAATAATAATAAAAACCGGAAGAAGCGGATTGCTTTTTCCGGTTTTTGTCATAGAAAGTAAGTTGCTTTTTACAGATAAAGTAAGTATACTGATAAACAATAAAAAGAGATGGAGAAGGAATATGCCGAAGGGAAAAACAACAGTATT TTTTGCAATAATAATAAAAACCGGAAGAAGCGGATTGCTTTTTCCGGTTTTT 52 TTerm_0150 NZ_LR027880.1 1002871 1002884 14 1002889 1002902 14 4 92 0 23 60 39 61 38 0 1002886 AAGAAGCCTTGAAC GTTCAAGGCTTTTT True CTGCTTGGA TGATATATT False True + AAGAAGCCTTGAAC GGAA GTTCAAGGCTTTTT TGATATATT 62 RIL182_RS04725 intergenic 1002865 1003256 + down CTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGA GGGAGTTCGATTCTCTCATCCCCTGCTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGATGGAGGCAAAAAAGCTGACAACGGA CTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTT 37 TTerm_0151 NZ_LR027880.1 1015513 1015523 11 1015528 1015538 11 4 100 0 22 63 36 63 36 0 1015525 TAATCCCATTC GAATGGGATTA True AAAAGCTCT TCTTTTATA True True + TAATCCCATTC TTCG GAATGGGATTA TCTTTTATA 68 RIL182_RS04760 intergenic 1015366 1015665 + down TAATTTTACATGATTTTTGAAGGAAAAATGTAAAAAATCAAAAACAGGTATTTACAATCGTCGAAAACAGGGGTATAATCTAAGAGAATTATATCATACCAAGTGATAATTAGGTTATTACAATAAGGTAAGAAACCTAAAAGCTCTAATCCCATTCTTCGGAATGGGATTATCTTTTATACAGAAGTTTATTCATGACAATGACCGGTATGCGGATCATTGTTGAAGCGCGCAGAATAAAACAGTTGTCCCGTTTGCTGGTATGAGAGAGAACGGTTCAGATGAGAGGAGAAGGAACA TTATGGTTTACAGGATATGGAATAATAATTTTACATGATTTTTGAAGGAAAAATGTAAAAAATCAAAAACAGGTATTTACAATCGTCGAAAACAGGGGTATAATCTAAGAGAATTATATCATACCAAGTGATAATTAGGTTATTACAATAAGGTAAGAAACCTAAAAGCTCTAATCCCATTCTTCGGAATGGGATTATCTTTTATACAGAAGTTTATTCATGACAATGACCGGTATGCGGATCATTGTTGAAGCGCGCAGAATAAAACAGTTGTCCCGTTTGCTGGTATGAGAGAGAACGGTTCAGATGAGAGGAGAAGGAACATGGACGAAAAAATGGATTATCGTAT TAATTTTACATGATTTTTGAAGGAAAAATGTAAAAAATCAAAAACAGGTATTTACAATCGTCGAAAACAGGGGTATAATCTAAGAGAATTATATCATACCAAGTGATAATTAGGTTATTACAATAAGGTAAGAAACCTAAAAGCTCTAATCCCATTCTTCGGAATGGGATTA 172 TTerm_0152 NZ_LR027880.1 1027783 1027795 13 1027801 1027813 13 5 100 0 26 53 46 53 46 0 1027797 AAAAAGGTTCCGG CCGGAACCTTTTT True AAGAATCAA GTGTAAAAA True True + AAAAAGGTTCCGG ATGTA CCGGAACCTTTTT GTGTAAAAA 84 RIL182_RS04795 intergenic 1027727 1027825 + down CACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTTGTGTAAAAAAGT GATCGCAGAGGGAGAGGCAGATTAACACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTTGTGTAAAAAAGTTATTCTTCTGTGCTGAGCGTATCCA CACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTT 86 TTerm_0153 NZ_LR027880.1 1027783 1027795 13 1027801 1027813 13 5 100 0 26 53 46 53 46 0 1027797 AAAAAGGTTCCGG CCGGAACCTTTTT True AAGAATCAA GTGTAAAAA True True + AAAAAGGTTCCGG ATGTA CCGGAACCTTTTT GTGTAAAAA 84 RIL182_RS04800 intergenic 1027727 1027825 - down ACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTTTTGATTCTTGACAACACACAGTTCTCAAACCTCTCATTCTTTGATTTTAAACTGTG TGGATACGCTCAGCACAGAAGAATAACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTTTTGATTCTTGACAACACACAGTTCTCAAACCTCTCATTCTTTGATTTTAAACTGTGTTAATCTGCCTCTCCCTCTGCGATC CACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTT 86 TTerm_0154 NZ_LR027880.1 1029920 1029927 8 1029934 1029941 8 6 87 0 11 62 37 57 42 0 1029930 ATTTCCCA TGGGATAT True ATCATTGCA AGTTTTTTG False True + ATTTCCCA GTGAGA TGGGATAT AGTTTTTTG 46 RIL182_RS04810 intergenic 1029906 1029985 + down ATAAAATCATTGCATTTCCCAGTGAGATGGGATATAGTTTTTTGAAAGAAAAAATACCTTGGTTTTTGGGAGGACGATA AAAATCAGTCGGGTTGATTGGATAAATAAAATCATTGCATTTCCCAGTGAGATGGGATATAGTTTTTTGAAAGAAAAAATACCTTGGTTTTTGGGAGGACGATATGGATATAACAGGCAGAAAATTATT ATAAAATCATTGCATTTCCCAGTGAGATGGGATAT 35 TTerm_0155 NZ_LR027880.1 1039792 1039808 17 1039816 1039832 17 7 100 0 34 64 35 64 35 0 1039811 AAAAAGAGTCATAACCG CGGTTATGACTCTTTTT True TTTGAATGA AAAACGAAT True True + AAAAAGAGTCATAACCG GCAAAAT CGGTTATGACTCTTTTT AAAACGAAT 92 RIL182_RS04850 intergenic 1039737 1039871 + down AGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTTAAAACGAATCAAATATTCAGGAAACATAACGTTTGTATT AGCCGGATGTGCGTGTGAGCTGTAAAGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTTAAAACGAATCAAATATTCAGGAAACATAACGTTTGTATTTAGATCTGGTGAAGTTTGCGCTCAT AGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTT 95 TTerm_0156 NZ_LR027880.1 1039792 1039808 17 1039816 1039832 17 7 100 0 34 64 35 64 35 0 1039811 AAAAAGAGTCATAACCG CGGTTATGACTCTTTTT True TTTGAATGA AAAACGAAT True True + AAAAAGAGTCATAACCG GCAAAAT CGGTTATGACTCTTTTT AAAACGAAT 92 RIL182_RS04855 intergenic 1039737 1039871 - down AATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTTTCATTCAAATTTGGAGAGCCTCTAAATTTTTCTGATTTTCACTCTATCTGAACCT ATGAGCGCAAACTTCACCAGATCTAAATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTTTCATTCAAATTTGGAGAGCCTCTAAATTTTTCTGATTTTCACTCTATCTGAACCTTTACAGCTCACACGCACATCCGGCT AGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTT 95 TTerm_0157 NZ_LR027880.1 1042758 1042772 15 1042782 1042796 15 9 100 0 30 46 53 46 53 0 1042776 AAAAAGCTCCTGCGC GCGCAGGAGCTTTTT True CAAAGCAAA GCTGCCAAT True True + AAAAAGCTCCTGCGC ATTAACCAA GCGCAGGAGCTTTTT GCTGCCAAT 100 RIL182_RS04860 intergenic 1042724 1042820 + down TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGAT GGACGGAAGTCAGCCACAGGGATGATGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGATCAATAACGTTTTATGGAAGGTTTAG TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTT 72 TTerm_0158 NZ_LR027880.1 1042758 1042772 15 1042782 1042796 15 9 100 0 30 46 53 46 53 0 1042776 AAAAAGCTCCTGCGC GCGCAGGAGCTTTTT True CAAAGCAAA GCTGCCAAT True True + AAAAAGCTCCTGCGC ATTAACCAA GCGCAGGAGCTTTTT GCTGCCAAT 100 RIL182_RS04865 intergenic 1042724 1042820 - down ATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCA CTAAACCTTCCATAAAACGTTATTGATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCATCATCCCTGTGGCTGACTTCCGTCC TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTT 72 TTerm_0159 NZ_LR027880.1 1042808 1042813 6 1042819 1042824 6 5 100 0 12 83 16 83 16 0 1042815 ATTGAT ATCAAT True GCCAATGGA AACGTTTTA False True + ATTGAT AAACG ATCAAT AACGTTTTA 32 RIL182_RS04860 intergenic 1042724 1042820 + down TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGAT GGACGGAAGTCAGCCACAGGGATGATGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGATCAATAACGTTTTATGGAAGGTTTAG TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGATCAAT 100 TTerm_0160 NZ_LR027880.1 1042808 1042813 6 1042819 1042824 6 5 100 0 12 83 16 83 16 0 1042815 ATTGAT ATCAAT True GCCAATGGA AACGTTTTA False True + ATTGAT AAACG ATCAAT AACGTTTTA 32 RIL182_RS04865 intergenic 1042724 1042820 - down ATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCA CTAAACCTTCCATAAAACGTTATTGATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCATCATCCCTGTGGCTGACTTCCGTCC TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGATCAAT 100 TTerm_0161 NZ_LR027880.1 1051514 1051539 26 1051549 1051575 27 9 85 3 27 75 24 73 26 0 1051543 TAAAATAAAAAATTCCGGCATCTATT AATAGATGACCGGAGTTTTTTTATTTA True TGTGGTTCT TGGCGGATT True True + TAAAATAAAAAATTCCGGCATCTATT TAGTAATTG AATAGATGACCGGAGTTTTTTTATTTA TGGCGGATT 62 RIL182_RS21610 intergenic 1051501 1051575 + down TATTTGTGGTTCTAAAATAAAAAATTCCGGCATCTATTTAGTAATTGAATAGATGACCGGAGTTTTTTTATTTA TGTACAGAAATTCGAATTAGAATAATATTTGTGGTTCTAAAATAAAAAATTCCGGCATCTATTTAGTAATTGAATAGATGACCGGAGTTTTTTTATTTATGGCGGATTGCAGGGAACAGGTGTA TATTTGTGGTTCTAAAATAAAAAATTCCGGCATCTATTTAGTAATTGAATAGATGACCGGAGTTTTTTTATTTA 74 TTerm_0162 NZ_LR027880.1 1054161 1054177 17 1054182 1054198 17 4 82 0 19 50 50 50 50 0 1054179 AATAAAAGCGTCAGGGC GCTCTGGCGCTTTTGTT True TAGCGAAAA ATGCCCGGT True True + AATAAAAGCGTCAGGGC TTAG GCTCTGGCGCTTTTGTT ATGCCCGGT 70 RIL182_RS04925 intergenic 1054077 1054493 + down CTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTTATGCCCGGTCGTCTCTCGATAGGGCTCGAGAAATAGAGCCTGCTCAGCTCGGCAGCTATCACCGTTCCTCTCTGGCCTCCTCGGCCGCGTGGCTATTGTTTACGGGTTGCACGGGACTGGCTGCGGCGCCTGCTGCCTTCTTGTCTCGTTTTAAGGTTTTCACATTAAAAACCAGCAAAACTTGTCAGCTATCACTCAGACCGGGCTTGATCTGTTCATTATGCGCACCCCTCTGAATTTTCACGGGCTTGGGACCGTCCTCGGCTTCATTAGTGCCCCGCATTGCTGCGGGTGT ATGGGTTCAAGTCCCATTGCCGGCACTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTTATGCCCGGTCGTCTCTCGATAGGGCTCGAGAAATAGAGCCTGCTCAGCTCGGCAGCTATCACCGTTCCTCTCTGGCCTCCTCGGCCGCGTGGCTATTGTTTACGGGTTGCACGGGACTGGCTGCGGCGCCTGCTGCCTTCTTGTCTCGTTTTAAGGTTTTCACATTAAAAACCAGCAAAACTTGTCAGCTATCACTCAGACCGGGCTTGATCTGTTCATTATGCGCACCCCTCTGAATTTTCACGGGCTTGGGACCGTCCTCGGCTTCATTAGTGCCCCGCATTGCTGCGGGTGTTATCTTTCCCCCATGTCTTTGTATA CTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTT 121 TTerm_0163 NZ_LR027880.1 1054161 1054177 17 1054182 1054198 17 4 82 0 19 50 50 50 50 0 1054179 AATAAAAGCGTCAGGGC GCTCTGGCGCTTTTGTT True TAGCGAAAA ATGCCCGGT True True + AATAAAAGCGTCAGGGC TTAG GCTCTGGCGCTTTTGTT ATGCCCGGT 70 RIL182_RS04930 intergenic 1054077 1054493 - down ACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTATTTTTCGCTATTTCCGCGTGAAGTTTACCACCACGGCGAACACTTTCTTGAAAAAGTACACCGGGTTCGGCTTCGCGCCATTGAG TATACAAAGACATGGGGGAAAGATAACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTATTTTTCGCTATTTCCGCGTGAAGTTTACCACCACGGCGAACACTTTCTTGAAAAAGTACACCGGGTTCGGCTTCGCGCCATTGAGTGCCGGCAATGGGACTTGAACCCAT CTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTT 121 TTerm_0164 NZ_LR027880.1 1059636 1059643 8 1059649 1059656 8 5 100 0 16 25 75 25 75 0 1059645 CCGGCTAC GTAGCCGG True CCAGTTACC ATTTTGAAA False True + CCGGCTAC ACGAG GTAGCCGG ATTTTGAAA 64 RIL182_RS04975 intergenic 1059618 1059678 - down AGCCGCGGCATAATTTCAAAATCCGGCTACCTCGTGTAGCCGGGTAACTGGAGGCATAGA TCTGCTTCCGAATTGACGAGGCGTAAGCCGCGGCATAATTTCAAAATCCGGCTACCTCGTGTAGCCGGGTAACTGGAGGCATAGAATGAGTAACGTATACACCAGAAACC TCTATGCCTCCAGTTACCCGGCTACACGAGGTAGCCGG 38 TTerm_0165 NZ_LR027880.1 1068064 1068072 9 1068078 1068086 9 5 88 0 13 5 94 0 100 0 1068074 GCCGCCGGC GCCAGCGGC True TAGAAAAAG CATGTTTTA True True + GCCGCCGGC GTTCT GCCAGCGGC CATGTTTTA 66 RIL182_RS05025 intergenic 1068035 1068093 - down AAACATGGCCGCTGGCAGAACGCCGGCGGCTTTTTCTATAAAAGGAGGAACCAAAACC TGAGCGACATTAACAAACTACTGTAAAACATGGCCGCTGGCAGAACGCCGGCGGCTTTTTCTATAAAAGGAGGAACCAAAACCATGAGAACCCAGACAGAAGAAAGAG GGTTTTGGTTCCTCCTTTTATAGAAAAAGCCGCCGGCGTTCTGCCAGCGGC 51 TTerm_0166 NZ_LR027880.1 1070085 1070090 6 1070098 1070103 6 7 100 0 12 83 16 83 16 0 1070093 TGTAAA TTTACA True AGCTCATCT ATAATTTTT False True + TGTAAA TCACTCC TTTACA ATAATTTTT 32 RIL182_RS05035 intergenic 1070083 1070099 - down AAGGAGTGATTTACAG CCGCAGACTATGAAAAATTATTGTAAAGGAGTGATTTACAGATGAGCTATCAACACGGAGCTTACG CTGTAAATCACTCCTTTACA 20 TTerm_0167 NZ_LR027880.1 1078791 1078796 6 1078802 1078807 6 5 100 0 12 83 16 83 16 0 1078798 GAAAAT ATTTTC True AACCTATTG TTTTGCCGG False True + GAAAAT TTTTT ATTTTC TTTTGCCGG 32 RIL182_RS05085 intergenic 1078679 1079123 - down AACTCTACAGGGCACACACGCAGCCACACGGGCACCATACACCACCAGAGAACCAGAGGCCAACCACTCCACACCATGCGAGCGGCTGGCCTCTTTCTATATGCTCAGCATTCTAAGACTGAGCCACCACATCAGGCGCGGCAAGCTGGCCCAGACATGGACCACACCCAAAGGCCACGCCACACCAGAGGCGCAGCCCCCGGCAGCAGGCCCGGGCAAGCCGAGGCAAGTCACCACTCGCGCGCCGAGTCGGCGCACCAACACCGCAGAGAAACGCAAGCGAAAAAAGAACGCGAACGCCGGGCACCCGGCAAAAGAAAATAAAAAATTTTCAATAGGTTCTTCTGAGCGAATTTTTTCCCTGCGGTGCTTGCGAGCCCAAAAACTTGCTAGACTCATAGAAAAATTTTAGGCCGTTTCGTTACGCCGGGAAGGAGGCAAGGC AAATGCTCGCCAAAGCTCAGGGGTGAACTCTACAGGGCACACACGCAGCCACACGGGCACCATACACCACCAGAGAACCAGAGGCCAACCACTCCACACCATGCGAGCGGCTGGCCTCTTTCTATATGCTCAGCATTCTAAGACTGAGCCACCACATCAGGCGCGGCAAGCTGGCCCAGACATGGACCACACCCAAAGGCCACGCCACACCAGAGGCGCAGCCCCCGGCAGCAGGCCCGGGCAAGCCGAGGCAAGTCACCACTCGCGCGCCGAGTCGGCGCACCAACACCGCAGAGAAACGCAAGCGAAAAAAGAACGCGAACGCCGGGCACCCGGCAAAAGAAAATAAAAAATTTTCAATAGGTTCTTCTGAGCGAATTTTTTCCCTGCGGTGCTTGCGAGCCCAAAAACTTGCTAGACTCATAGAAAAATTTTAGGCCGTTTCGTTACGCCGGGAAGGAGGCAAGGCATGGCAACACCACGAAAAGAAAAAC GCCTTGCCTCCTTCCCGGCGTAACGAAACGGCCTAAAATTTTTCTATGAGTCTAGCAAGTTTTTGGGCTCGCAAGCACCGCAGGGAAAAAATTCGCTCAGAAGAACCTATTGAAAATTTTTTATTTTC 128 TTerm_0168 NZ_LR027880.1 1079840 1079845 6 1079852 1079857 6 6 100 0 12 83 16 83 16 0 1079848 CAATTT AAATTG True ACACGGCTC CATCTTTTT False True + CAATTT CAAAGT AAATTG CATCTTTTT 32 RIL182_RS05090 intergenic 1079734 1079908 - down GCCGCCGCCGGCAGCAGGCTGAGCGTGCAATTTACCGGTGCAAAAAAGATGCAATTTACTTTGAAATTGAGCCGTGTTATAATTTTTACAATGCAATAAATGGGTAAAGAAACCGCGCGAGAAAATCGGGCGGTTTTTTGCTGCCGTTTTCAGGCTGAGAGGAGGCGATCACAC TATATGGCACGGCCGCCATTGATTAGCCGCCGCCGGCAGCAGGCTGAGCGTGCAATTTACCGGTGCAAAAAAGATGCAATTTACTTTGAAATTGAGCCGTGTTATAATTTTTACAATGCAATAAATGGGTAAAGAAACCGCGCGAGAAAATCGGGCGGTTTTTTGCTGCCGTTTTCAGGCTGAGAGGAGGCGATCACACATGGCAGCCACCAGAGGAACAACCA GTGTGATCGCCTCCTCTCAGCCTGAAAACGGCAGCAAAAAACCGCCCGATTTTCTCGCGCGGTTTCTTTACCCATTTATTGCATTGTAAAAATTATAACACGGCTCAATTTCAAAGTAAATTG 123 TTerm_0169 NZ_LR027880.1 1093214 1093223 10 1093231 1093240 10 7 80 0 10 20 80 12 87 0 1093226 GGGCTGGACG CGTCTGGCCC True GGTCACTTG TTTTTATGT False True + GGGCTGGACG TTCTGGG CGTCTGGCCC TTTTTATGT 52 RIL182_RS05195 intergenic 1093211 1093252 - down AGGACATAAAAAGGGCCAGACGCCCAGAACGTCCAGCCCAA GCATACAGACCAATGCAAACACATGAGGACATAAAAAGGGCCAGACGCCCAGAACGTCCAGCCCAAGTGACCGCGAAGAAGGAGACGGTGC TTGGGCTGGACGTTCTGGGCGTCTGGCCC 29 TTerm_0170 NZ_LR027880.1 1106627 1106645 19 1106652 1106670 19 6 78 0 18 36 63 33 66 0 1106648 AGCCTTTCGTCCCATGTGC GCACACAGGGCGGAAGGCT True TGATTTATA TTTTGTGTT False True + AGCCTTTCGTCCCATGTGC AGGATG GCACACAGGGCGGAAGGCT TTTTGTGTT 68 RIL182_RS05270 intergenic 1106357 1106770 + down ACTTGCATTACGGAAATAATGAGTGTATAATAACGTCAGAAATTGGCAGTGATGGAAGCTGCGGCAGCAGGAATGTTTCAGAGAGCCGGTGGATGGTGAGAACCGGTACAGGAAAATGCCTTTCCACTTCCGGAGTCAGTGATGAAAGTCACGGGGTCGTATCCCATAGCATACGAATCGAGAGGTCATTGCAAAAGGATTTCCACAAAAAGCTTTGGATAAGAATGCTGCAGTGACAAGATGGGTGGCAACGCGGAAGAGTGATTTATAGCCTTTCGTCCCATGTGCAGGATGGCACACAGGGCGGAAGGCTTTTTGTGTTATCAGGAAAAATGTCAGACAGAGATTTGCTGTCCGGCAAAATCAGAAATTTACAAAAAGAAGCGGCAGGTTCCGCAGAAAGAGGAGAACGA GGAAGAAAAAATCAGGGTATATTAGACTTGCATTACGGAAATAATGAGTGTATAATAACGTCAGAAATTGGCAGTGATGGAAGCTGCGGCAGCAGGAATGTTTCAGAGAGCCGGTGGATGGTGAGAACCGGTACAGGAAAATGCCTTTCCACTTCCGGAGTCAGTGATGAAAGTCACGGGGTCGTATCCCATAGCATACGAATCGAGAGGTCATTGCAAAAGGATTTCCACAAAAAGCTTTGGATAAGAATGCTGCAGTGACAAGATGGGTGGCAACGCGGAAGAGTGATTTATAGCCTTTCGTCCCATGTGCAGGATGGCACACAGGGCGGAAGGCTTTTTGTGTTATCAGGAAAAATGTCAGACAGAGATTTGCTGTCCGGCAAAATCAGAAATTTACAAAAAGAAGCGGCAGGTTCCGCAGAAAGAGGAGAACGATGATCGATTTAAAATTTTTAAGAGA ACTTGCATTACGGAAATAATGAGTGTATAATAACGTCAGAAATTGGCAGTGATGGAAGCTGCGGCAGCAGGAATGTTTCAGAGAGCCGGTGGATGGTGAGAACCGGTACAGGAAAATGCCTTTCCACTTCCGGAGTCAGTGATGAAAGTCACGGGGTCGTATCCCATAGCATACGAATCGAGAGGTCATTGCAAAAGGATTTCCACAAAAAGCTTTGGATAAGAATGCTGCAGTGACAAGATGGGTGGCAACGCGGAAGAGTGATTTATAGCCTTTCGTCCCATGTGCAGGATGGCACACAGGGCGGAAGGCT 313 TTerm_0171 NZ_LR027880.1 1112518 1112523 6 1112533 1112538 6 9 100 0 12 83 16 83 16 0 1112527 TCTTTT AAAAGA True CTGATCCTT GTCTGTTTT False True + TCTTTT GTGTCGAAA AAAAGA GTCTGTTTT 32 RIL182_RS05300 intergenic 1112439 1112671 + down CGGAACAAAAAAGTAAATATTGTATGAATGATACAAAAGAAGGATCAGTCAATGGAATGAGGTACGTTGGCTGATCCTTCTTTTGTGTCGAAAAAAAGAGTCTGTTTTACATATTGACTGAAAAAATAGAGGAAATAATGCCTTGCTATCAGATTAAGAAATGAATATAATTAATATATCAGTAATTTTTGGGGAACGTAATAGACAGCAGAAAGGATACGGGGGTTATTCA AATACAAAGGTCTGCAGAAGCATAGCGGAACAAAAAAGTAAATATTGTATGAATGATACAAAAGAAGGATCAGTCAATGGAATGAGGTACGTTGGCTGATCCTTCTTTTGTGTCGAAAAAAAGAGTCTGTTTTACATATTGACTGAAAAAATAGAGGAAATAATGCCTTGCTATCAGATTAAGAAATGAATATAATTAATATATCAGTAATTTTTGGGGAACGTAATAGACAGCAGAAAGGATACGGGGGTTATTCATGAATGAGATCATTACGAAACTTGA CGGAACAAAAAAGTAAATATTGTATGAATGATACAAAAGAAGGATCAGTCAATGGAATGAGGTACGTTGGCTGATCCTTCTTTTGTGTCGAAAAAAAGA 99 TTerm_0172 NZ_LR027880.1 1156536 1156556 21 1156565 1156585 21 8 71 0 12 52 47 53 46 0 1156560 TACCGACCCCAAAAGTTTAGA TCTAACGATTGGAGGCCGGTA True GAAAAGTGT TTTTTATTG True True + TACCGACCCCAAAAGTTTAGA CCTAAAAA TCTAACGATTGGAGGCCGGTA TTTTTATTG 40 RIL182_RS05495 intergenic 1156481 1156769 + down TAAGGCAGTTATAATTTTTTGTATATGAAAAAAGAGATATGATATCGAAAAGTGTACCGACCCCAAAAGTTTAGACCTAAAAATCTAACGATTGGAGGCCGGTATTTTTATTGCTTTATTTGTTTCATATAAATTCAATGAAATCTCAATATCTTGTAATCTTTAGAATTCCTTAATAATATTTTCCATAAAATAAATGTTGACAAATTATATTATACGAAATATAGTATTAATAAGAAAATAATATTAAAACAGATAGAATATTATAAAGAAAAGGAGATGAGCGTA CGTGTATCTGTTTGGTGCGAAATAGTAAGGCAGTTATAATTTTTTGTATATGAAAAAAGAGATATGATATCGAAAAGTGTACCGACCCCAAAAGTTTAGACCTAAAAATCTAACGATTGGAGGCCGGTATTTTTATTGCTTTATTTGTTTCATATAAATTCAATGAAATCTCAATATCTTGTAATCTTTAGAATTCCTTAATAATATTTTCCATAAAATAAATGTTGACAAATTATATTATACGAAATATAGTATTAATAAGAAAATAATATTAAAACAGATAGAATATTATAAAGAAAAGGAGATGAGCGTATGGTATTTAATACAGGAGCCGCTCT TAAGGCAGTTATAATTTTTTGTATATGAAAAAAGAGATATGATATCGAAAAGTGTACCGACCCCAAAAGTTTAGACCTAAAAATCTAACGATTGGAGGCCGGTA 104 TTerm_0173 NZ_LR027880.1 1192802 1192818 17 1192826 1192842 17 7 88 0 24 64 35 66 33 0 1192821 AAAGAAGGACTTTATCC GGATAGAGTCCTTTTTT True AAATAGAAA CAATAGTTG True True + AAAGAAGGACTTTATCC CCAAAAC GGATAGAGTCCTTTTTT CAATAGTTG 72 RIL182_RS05620 intergenic 1192730 1192902 + down CAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTTCAATAGTTGTATTTTGAAGATGAAGGAACATGATGAGGAAGAAATCTGAAAAAATTCGTT CCATCTGACTGCGCGCGTAAAGTGACAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTTCAATAGTTGTATTTTGAAGATGAAGGAACATGATGAGGAAGAAATCTGAAAAAATTCGTTTATTTGCTGTGTACTTTGCGCAGCA CAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTT 112 TTerm_0174 NZ_LR027880.1 1192802 1192818 17 1192826 1192842 17 7 88 0 24 64 35 66 33 0 1192821 AAAGAAGGACTTTATCC GGATAGAGTCCTTTTTT True AAATAGAAA CAATAGTTG True True + AAAGAAGGACTTTATCC CCAAAAC GGATAGAGTCCTTTTTT CAATAGTTG 72 RIL182_RS05625 intergenic 1192730 1192902 - down AACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTTTTTCTATTTTGTATCTATACAATTATCTCTTCAGGCACATTGTCTGATTCTCTCGCTACCATCCACAATCTG TGCTGCGCAAAGTACACAGCAAATAAACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTTTTTCTATTTTGTATCTATACAATTATCTCTTCAGGCACATTGTCTGATTCTCTCGCTACCATCCACAATCTGTCACTTTACGCGCGCAGTCAGATGG CAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTT 112 TTerm_0175 NZ_LR027880.1 1197346 1197371 26 1197378 1197403 26 6 84 0 32 71 28 72 27 0 1197374 AAAACCAAAACGTTTTGGGATATGAT ATCAGTTACCAAAACGTTTTAGTTTT True AAGACTTGA TTACTTTAT True True + AAAACCAAAACGTTTTGGGATATGAT TCGTTT ATCAGTTACCAAAACGTTTTAGTTTT TTACTTTAT 80 RIL182_RS05640 intergenic 1197266 1197437 + down ACTTGTGAAAATTATATAAAAGTAAACAATAAAATTCGTGAAACATGATGAAAAAACAAAAAAATGTACAAAAGACTTGAAAACCAAAACGTTTTGGGATATGATTCGTTTATCAGTTACCAAAACGTTTTAGTTTTTTACTTTATACTAATGTTTCAGGAGGAATACATA GAAACGCGCATCAACAAAGAAATGAACTTGTGAAAATTATATAAAAGTAAACAATAAAATTCGTGAAACATGATGAAAAAACAAAAAAATGTACAAAAGACTTGAAAACCAAAACGTTTTGGGATATGATTCGTTTATCAGTTACCAAAACGTTTTAGTTTTTTACTTTATACTAATGTTTCAGGAGGAATACATATGAAGAAAAGATTTGTATCTATTTT ACTTGTGAAAATTATATAAAAGTAAACAATAAAATTCGTGAAACATGATGAAAAAACAAAAAAATGTACAAAAGACTTGAAAACCAAAACGTTTTGGGATATGATTCGTTTATCAGTTACCAAAACGTTTTAGTTTT 137 TTerm_0176 NZ_LR027880.1 1198814 1198827 14 1198835 1198848 14 7 85 0 18 53 46 50 50 0 1198830 AGGGGGAGTCATTT AATTGATTCCCCCT True AATCATGGA TTTCTTTCA False True + AGGGGGAGTCATTT ACGGACA AATTGATTCCCCCT TTTCTTTCA 44 RIL182_RS05645 intergenic 1198798 1198926 + down TCAATGAAATCATGGAGGGGGAGTCATTTACGGACAAATTGATTCCCCCTTTTCTTTCAGAAGATTGCCTTCTGGATGCGGAATTTATCTGAAAATAATGAATATTTCTGAAAGGAAAGGGAATATTA AGCCGCTGAAGCTGGTGACAAATAATCAATGAAATCATGGAGGGGGAGTCATTTACGGACAAATTGATTCCCCCTTTTCTTTCAGAAGATTGCCTTCTGGATGCGGAATTTATCTGAAAATAATGAATATTTCTGAAAGGAAAGGGAATATTATGACAAAAAAGAAAAAATATGGAAA TCAATGAAATCATGGAGGGGGAGTCATTTACGGACAAATTGATTCCCCCT 50 TTerm_0177 NZ_LR027880.1 1216421 1216433 13 1216438 1216450 13 4 92 0 21 57 42 58 41 0 1216435 AAAAGGCAAGGGA TCTCTTGCCTTTT True GGCTTATGA GGTTATTTA True True + AAAAGGCAAGGGA GAGA TCTCTTGCCTTTT GGTTATTTA 58 RIL182_RS05705 intergenic 1216405 1216581 + down GGTGGCTGGCTTATGAAAAGGCAAGGGAGAGATCTCTTGCCTTTTGGTTATTTATGTCAGATTATGAAATAGAAAAATAAATATTTTACGTTAATATATGAAAATTTGGAAGATGCATGTTACAATAGTAAGTAAATAAAATATAAAGGCATAAAATAACAGATGGAGAAGGGGAA CACGTATAAGACGGAAGAGTTGTAGGGTGGCTGGCTTATGAAAAGGCAAGGGAGAGATCTCTTGCCTTTTGGTTATTTATGTCAGATTATGAAATAGAAAAATAAATATTTTACGTTAATATATGAAAATTTGGAAGATGCATGTTACAATAGTAAGTAAATAAAATATAAAGGCATAAAATAACAGATGGAGAAGGGGAATGTTAGCAAAATTAGAATTAAAGTT GGTGGCTGGCTTATGAAAAGGCAAGGGAGAGATCTCTTGCCTTTT 45 TTerm_0178 NZ_LR027880.1 1220703 1220712 10 1220718 1220727 10 5 90 0 15 95 5 100 0 0 1220714 AAAATAAATT AATTGATTTT True AGTGGAATA TGACTACAG True True + AAAATAAATT TGCAG AATTGATTTT TGACTACAG 38 RIL182_RS05725 intergenic 1220704 1220760 + down AATAAATTTGCAGAATTGATTTTTGACTACAGAGAGAAAAGAAATGAGGCGGGACA GAAAATCATGAGTGCAGTGGAATAAAATAAATTTGCAGAATTGATTTTTGACTACAGAGAGAAAAGAAATGAGGCGGGACATGGAATATACGATCTATCAGTTAGA AATAAATTTGCAGAATTGATTTT 23 TTerm_0179 NZ_LR027880.1 1229716 1229729 14 1229735 1229748 14 5 100 0 28 64 35 64 35 0 1229731 AAAAAAGCAAGGGA TCCCTTGCTTTTTT True CATGACATA CTCCCCTCT True True + AAAAAAGCAAGGGA CAACA TCCCTTGCTTTTTT CTCCCCTCT 80 RIL182_RS05760 intergenic 1229699 1229846 + down GAGTACTGCATGACATAAAAAAGCAAGGGACAACATCCCTTGCTTTTTTCTCCCCTCTGTGCTACACTGTCACAAGCTGACAAGACACATGTTAACCACATGAAAACACAGCAAAGAGGAGTAAGAAACTCCGGATTGGAGAAATTA TGTTCATAAGTTATTAACGGAATAAGAGTACTGCATGACATAAAAAAGCAAGGGACAACATCCCTTGCTTTTTTCTCCCCTCTGTGCTACACTGTCACAAGCTGACAAGACACATGTTAACCACATGAAAACACAGCAAAGAGGAGTAAGAAACTCCGGATTGGAGAAATTATGGAAAAAGTAAAGGCATTTTGTAA GAGTACTGCATGACATAAAAAAGCAAGGGACAACATCCCTTGCTTTTTT 49 TTerm_0180 NZ_LR027880.1 1238442 1238458 17 1238466 1238483 18 7 94 5 24 65 34 64 35 0 1238461 AAAAGCTGCCAATGATA TATCATTAGGCAGCTTTT True TGTAGGAGA TATAATGAA True True + AAAAGCTGCCAATGATA GTGATAA TATCATTAGGCAGCTTTT TATAATGAA 56 RIL182_RS05800 intergenic 1238404 1238627 + down GAGAGACAGGTATAAAGTGAAAATGAATGTGTAGGAGAAAAGCTGCCAATGATAGTGATAATATCATTAGGCAGCTTTTTATAATGAACAAAGGAAAAAGAAAACGTGTATTTTGACTGGATTATATAGTATAATATATTCCGTGTCTGAGAGAGAAATAAAACATAAGAGGATAGTGCGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGGGATTAAGA AAAAATAAAAGTTGTGGTCAAATAAGAGAGACAGGTATAAAGTGAAAATGAATGTGTAGGAGAAAAGCTGCCAATGATAGTGATAATATCATTAGGCAGCTTTTTATAATGAACAAAGGAAAAAGAAAACGTGTATTTTGACTGGATTATATAGTATAATATATTCCGTGTCTGAGAGAGAAATAAAACATAAGAGGATAGTGCGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGGGATTAAGATGAGAATAGGATTTGATAATGACAA GAGAGACAGGTATAAAGTGAAAATGAATGTGTAGGAGAAAAGCTGCCAATGATAGTGATAATATCATTAGGCAGCTTTT 79 TTerm_0181 NZ_LR027880.1 1248807 1248813 7 1248818 1248824 7 4 100 0 14 57 42 57 42 0 1248815 GGAACAA TTGTTCC True AGAGGTTTG GGATTTTTC False True + GGAACAA TTTT TTGTTCC GGATTTTTC 44 RIL182_RS05855 intergenic 1248759 1248863 + down GAGAGGTTTGACGTGTGAAAAATTTCAGATTAAAATGATAGAGGTTTGGAACAATTTTTTGTTCCGGATTTTTCATAATGAATACAAACAGGGGGAATGAGAAA AAAAATCGGGGAAGGGTTGTCGTAGGAGAGGTTTGACGTGTGAAAAATTTCAGATTAAAATGATAGAGGTTTGGAACAATTTTTTGTTCCGGATTTTTCATAATGAATACAAACAGGGGGAATGAGAAATGGTCACATCCATCGCACGTCAGAG GAGAGGTTTGACGTGTGAAAAATTTCAGATTAAAATGATAGAGGTTTGGAACAATTTTTTGTTCC 65 TTerm_0182 NZ_LR027880.1 1264054 1264066 13 1264074 1264086 13 7 84 0 16 61 38 63 36 0 1264069 AAAAAGGGAGTCA TGACTCCTCTTTT True TATTTGTAA AGGGTATCT True True + AAAAAGGGAGTCA ACATGAC TGACTCCTCTTTT AGGGTATCT 56 RIL182_RS05945 intergenic 1264054 1264328 + down AAAAGGGAGTCAACATGACTGACTCCTCTTTTAGGGTATCTTCTGTAAATATATGAGTTTCATATCCTCTCGATTTTTAAAATTTTTGTTCTTTCGCCGGATATTATATTTCCGGTGTTTCTACCATAGTTTTTCTCGACATCATCCTCTTTTCGTTACTTGTTTTCTTAGTTTTTATATTTTCTGCTTAACAAGCATAATTATAAGGCGCGTTTTATATATAAATAATATAAATTCTTCTTGACAAGCATATTTTATGGATGGAGAACATGCA GATCCTGGTAGAGAAATATTTGTAAAAAAGGGAGTCAACATGACTGACTCCTCTTTTAGGGTATCTTCTGTAAATATATGAGTTTCATATCCTCTCGATTTTTAAAATTTTTGTTCTTTCGCCGGATATTATATTTCCGGTGTTTCTACCATAGTTTTTCTCGACATCATCCTCTTTTCGTTACTTGTTTTCTTAGTTTTTATATTTTCTGCTTAACAAGCATAATTATAAGGCGCGTTTTATATATAAATAATATAAATTCTTCTTGACAAGCATATTTTATGGATGGAGAACATGCATGAAAGCATTTTGGTATAACGATGA AAAAGGGAGTCAACATGACTGACTCCTCTTTT 32 TTerm_0183 NZ_LR027880.1 1267144 1267159 16 1267169 1267184 16 9 87 0 22 62 37 57 42 0 1267163 AAAACGCTGAATCCAT ATGGAAACAGCGTTTT True GAAAATGAA GGCAAAATC True True + AAAACGCTGAATCCAT GATAAATCA ATGGAAACAGCGTTTT GGCAAAATC 60 RIL182_RS05955 intergenic 1267126 1267208 + down TTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTTGGCAAAATCAATAAAACAAAGCGT GATGTATGGGAAAAGGACGGTGTAATTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTTGGCAAAATCAATAAAACAAAGCGTTACATTTCAACCACAGCAACACCCC TTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTT 58 TTerm_0184 NZ_LR027880.1 1267144 1267159 16 1267169 1267184 16 9 87 0 22 62 37 57 42 0 1267163 AAAACGCTGAATCCAT ATGGAAACAGCGTTTT True GAAAATGAA GGCAAAATC True True + AAAACGCTGAATCCAT GATAAATCA ATGGAAACAGCGTTTT GGCAAAATC 60 RIL182_RS05960 intergenic 1267126 1267208 - down ACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTTTTCATTTTCAATGTACAA GGGGTGTTGCTGTGGTTGAAATGTAACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTTTTCATTTTCAATGTACAATTACACCGTCCTTTTCCCATACATC TTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTT 58 TTerm_0185 NZ_LR027880.1 1275172 1275189 18 1275198 1275215 18 8 94 0 31 69 30 70 29 0 1275193 AGTCATGACAGATTTTAG CTAAAATTTGTCATGACT True TGATAGAGA TTTTTTGAT False True + AGTCATGACAGATTTTAG ATGAAAAA CTAAAATTTGTCATGACT TTTTTTGAT 70 RIL182_RS05975 intergenic 1275144 1275326 + down ACGAGGACAATAGTACCTGTGATAGAGAGTCATGACAGATTTTAGATGAAAAACTAAAATTTGTCATGACTTTTTTTGATTTTTGTCCGGTTGTAGAAAAATGACAAATTGGTAAAATAAAATTACAAAATCTGATACAGATCTTACAGAAATCAGATGTGATTAAGAAGGAGGAGAAAAAA GAAGACACGCAGTGTAAATGAATAAACGAGGACAATAGTACCTGTGATAGAGAGTCATGACAGATTTTAGATGAAAAACTAAAATTTGTCATGACTTTTTTTGATTTTTGTCCGGTTGTAGAAAAATGACAAATTGGTAAAATAAAATTACAAAATCTGATACAGATCTTACAGAAATCAGATGTGATTAAGAAGGAGGAGAAAAAATGAAACGAAGAAAAGCAGTGTCAGT ACGAGGACAATAGTACCTGTGATAGAGAGTCATGACAGATTTTAGATGAAAAACTAAAATTTGTCATGACT 71 TTerm_0186 NZ_LR027880.1 1287564 1287588 25 1287598 1287622 25 9 84 0 30 60 40 61 38 0 1287592 AGAATAAGCAATGGGCGAAACACAT ATGTGTTTCGCCCGTTTTTTATGCT True TGTTGGAGA GAAATTGTC False True + AGAATAAGCAATGGGCGAAACACAT AGCGAATAA ATGTGTTTCGCCCGTTTTTTATGCT GAAATTGTC 76 RIL182_RS06015 intergenic 1287511 1288075 + down ATATAATCAGGAAAATACAGTTCTGAGAAAATTGAAGATCATCCTGTTGGAGAGAATAAGCAATGGGCGAAACACATAGCGAATAAATGTGTTTCGCCCGTTTTTTATGCTGAAATTGTCGGAAATCACATGAAATGGGCGAAATGATTACAATGATTACCGGAATAGCCCGCAGATCAGCGGGAATGAGGGTGAATCTGAAGCAATGTGATGGAAATTCGCCCAAAACAAAGGAAAAGGCAGGAAAATCCCTGATTCAAAAAATATCAAAAACGAGCCAAAATATCCATAAAAAGATGATATAAGAATTGAAAATGCACGGAAAATCAATAGTTAACGGTTGCGCAAAAGTCGAATTTGAAAAAAATAAAAGAAAAAATAGAAGATGATATTGTGCAAAATGGCTAAAAAATGGTCGGATTTATTATAAAATGTGGATATTGACACAAGGATGTGACGGAGATATACTCTAACCATAGAACAACCGATTGCGCATAGCGCAACACGAAAAAGTGTTCTAAAAGAACAATTTTTTCTATCAAGGAAAAGGGAGGAATTTTCAAA ATATAATCAGGAAAATACAGTTCTGAGAAAATTGAAGATCATCCTGTTGGAGAGAATAAGCAATGGGCGAAACACATAGCGAATAAATGTGTTTCGCCCGTTTTTTATGCT 111 TTerm_0187 NZ_LR027880.1 1294002 1294011 10 1294021 1294030 10 9 100 0 20 40 60 40 60 0 1294015 ACTGCCGTAC GTACGGCAGT True ACAAAATGA TTTAAAAAG True True + ACTGCCGTAC TGAAATATT GTACGGCAGT TTTAAAAAG 72 RIL182_RS06040 intergenic 1293978 1294051 + down ATTCTGGTAACAGAAACAAAATGACTGCCGTACTGAAATATTGTACGGCAGTTTTAAAAAGAGGTAATAACCA AATTACAAAATTTGATTTTGACTAAATTCTGGTAACAGAAACAAAATGACTGCCGTACTGAAATATTGTACGGCAGTTTTAAAAAGAGGTAATAACCATGGGAAAAAAGAAAAAAGACACAAT ATTCTGGTAACAGAAACAAAATGACTGCCGTACTGAAATATTGTACGGCAGT 52 TTerm_0188 NZ_LR027880.1 1299466 1299482 17 1299489 1299505 17 6 94 0 29 73 26 75 25 0 1299485 AAAATCCTGCAATATTT AAATGTTGCAGGATTTT True GTGTATAGA TTGCACTTT True True + AAAATCCTGCAATATTT ATGTAA AAATGTTGCAGGATTTT TTGCACTTT 66 RIL182_RS06055 intergenic 1299430 1299681 + down AAAGTATTGCTGTCTGGAGATAAAAGAGTGTATAGAAAATCCTGCAATATTTATGTAAAAATGTTGCAGGATTTTTTGCACTTTGTTGCAGTTTGCGTTTCAGCCATTGCAAAGGAATTCGGATGCGTTATAATAGGATTATCAGAGAAAACGAAACAAATGCATCCTGCTTTTACGGGAAAGGAAAACAGACGGGATGACGTGGAACAAAATAAGAACAAATGATGTATTGTAAAAAGGAGGATTTAAGA ACTGATCCGTGATTTTAAGGCATAAAAAGTATTGCTGTCTGGAGATAAAAGAGTGTATAGAAAATCCTGCAATATTTATGTAAAAATGTTGCAGGATTTTTTGCACTTTGTTGCAGTTTGCGTTTCAGCCATTGCAAAGGAATTCGGATGCGTTATAATAGGATTATCAGAGAAAACGAAACAAATGCATCCTGCTTTTACGGGAAAGGAAAACAGACGGGATGACGTGGAACAAAATAAGAACAAATGATGTATTGTAAAAAGGAGGATTTAAGATGGTTTGGGAGAACGTACTGGCAAA AAAGTATTGCTGTCTGGAGATAAAAGAGTGTATAGAAAATCCTGCAATATTTATGTAAAAATGTTGCAGGATTTT 75 TTerm_0189 NZ_LR027880.1 1309937 1309951 15 1309961 1309975 15 9 93 0 25 96 3 100 0 0 1309955 TAAAAAAGTTATAAA TTTATAAATTTTTTA True TGCAAAATT TAGGCGAAA True True + TAAAAAAGTTATAAA ATCGTTTAA TTTATAAATTTTTTA TAGGCGAAA 50 RIL182_RS06095 intergenic 1309950 1310126 + down AATCGTTTAATTTATAAATTTTTTATAGGCGAAATGGGAAACATATGATATAATAAACATATGCAATAAGCAGTGCGGAATTATTTGTTTTCTGAACAAGTACTGCAATACGGGAATAATATGTATCATATGACTGTAAGATGTCACAGTCTGAAAATAGAAGGAGGGGAGCCCCA TTTTGCAAAATTAAAAAAGTTATAAAATCGTTTAATTTATAAATTTTTTATAGGCGAAATGGGAAACATATGATATAATAAACATATGCAATAAGCAGTGCGGAATTATTTGTTTTCTGAACAAGTACTGCAATACGGGAATAATATGTATCATATGACTGTAAGATGTCACAGTCTGAAAATAGAAGGAGGGGAGCCCCATGAACAAGATGGATGATTTAAAAGA AATCGTTTAATTTATAAATTTTTTA 25 TTerm_0190 NZ_LR027880.1 1310434 1310444 11 1310449 1310459 11 4 90 0 17 40 59 40 60 0 1310446 AAGGGGCTGCA TGCAGCCCTTT True ATATCTTTA TTAAATTCA False True + AAGGGGCTGCA GTGT TGCAGCCCTTT TTAAATTCA 66 RIL182_RS06100 intergenic 1310422 1310493 + down GAAATATCTTTAAGGGGCTGCAGTGTTGCAGCCCTTTTTAAATTCATAGGAAAAGAGAAAGGAACTGGTTA GGCAGAGGACAAAACAGAAGAGTAAGAAATATCTTTAAGGGGCTGCAGTGTTGCAGCCCTTTTTAAATTCATAGGAAAAGAGAAAGGAACTGGTTATGAAAAAAGGGCAGATCGTAGAAGG GAAATATCTTTAAGGGGCTGCAGTGTTGCAGCCCTTT 37 TTerm_0191 NZ_LR027880.1 1312446 1312464 19 1312473 1312491 19 8 84 0 23 47 52 43 56 0 1312468 TAAAACTCAGCCCTCTGCC GGCAGAGGGCCGTTTTTTA True CCTTAGATT CTTAACAGT True True + TAAAACTCAGCCCTCTGCC TTTTCATT GGCAGAGGGCCGTTTTTTA CTTAACAGT 78 RIL182_RS06110 intergenic 1312448 1312500 + down AACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTACTTAACAGT AACTGAATGTAAACCCTTAGATTAAAACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTACTTAACAGTTATTGAGCATCCCTTAATTGCTCTA AACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTA 43 TTerm_0192 NZ_LR027880.1 1312446 1312464 19 1312473 1312491 19 8 84 0 23 47 52 43 56 0 1312468 TAAAACTCAGCCCTCTGCC GGCAGAGGGCCGTTTTTTA True CCTTAGATT CTTAACAGT True True + TAAAACTCAGCCCTCTGCC TTTTCATT GGCAGAGGGCCGTTTTTTA CTTAACAGT 78 RIL182_RS06115 intergenic 1312448 1312500 - down ACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTT TAGAGCAATTAAGGGATGCTCAATAACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTTTTAATCTAAGGGTTTACATTCAGTT AACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTA 43 TTerm_0193 NZ_LR027880.1 1320720 1320737 18 1320742 1320759 18 4 88 0 26 61 38 56 43 0 1320739 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True + AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTCTTATGC 68 RIL182_RS06155 intergenic 1320586 1320763 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAACTCCGTTTCAAAAAACAGGACAACTTATTGATAGATGTAGATTTCTTTACATTAGCATGATACAATTAAGAAAGTGAAAAAACAGGACAGGAGGTAAGC GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAACTCCGTTTCAAAAAACAGGACAACTTATTGATAGATGTAGATTTCTTTACATTAGCATGATACAATTAAGAAAGTGAAAAAACAGGACAGGAGGTAAGCATGAACCAAGAATTGATGACATTGG GCTTACCTCCTGTCCTGTTTTTTCACTTTCTTAATTGTATCATGCTAATGTAAAGAAATCTACATCTATCAATAAGTTGTCCTGTTTTTTGAAACGGAGTTGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTT 173 TTerm_0194 NZ_LR027880.1 1327531 1327548 18 1327553 1327570 18 4 88 0 26 61 38 56 43 0 1327550 AACCGATGGTTTTGACTA TAGTCTATACCATCGGTT True CATAAGAAA CTTTTGTTA True True + AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT CTTTTGTTA 68 RIL182_RS06185 intergenic 1327527 1327604 + down GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCG CGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCGCAAACTTAAAGTATAAATATGGAAA GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTT 43 TTerm_0195 NZ_LR027880.1 1331807 1331814 8 1331822 1331829 8 7 100 0 16 62 37 62 37 0 1331817 AAAACAGG CCTGTTTT True TCTGAGAGA TTTTATGTT False True + AAAACAGG TCACGAG CCTGTTTT TTTTATGTT 56 RIL182_RS06215 intergenic 1331803 1332265 + down GAGAAAACAGGTCACGAGCCTGTTTTTTTTATGTTACCTAAAACTATCTGTGTAGCGAAAAAATTTACAATAAATTTACCAGACATTTACCATAAGGAGATTTCAGTAACAACAGGAGAAAGATAAAATAGCCATTGAACAAACAAAAGGAAAGGTAAAAAGGAGCCGGATAAAAAGGTAAGTTAAGGCTTCAAAAGGAGAAAATCTACAGTGGGATGTCGTGTGGATCGATTCCATGCAGGCAGGTGTGCTTGTATACCGCAAGATGTGTGGAGCGAGGCAGATGTAACAAAAACACAGAGAACTCTTTCTGTATGGTTTAAAACCGTCAGGGGGAGTTCTTTTTTATTTAAAGATTGTAAACGTTTGCAGGAAAATAAAGATAATTGCAAAATTACGAATAAAAACATACATAAAAAAACGAAACAAACAGTGGAAAAATAAGGAAAATACCATCTGCCA AAACCGGATGGAATATTATATCTGAGAGAAAACAGGTCACGAGCCTGTTTTTTTTATGTTACCTAAAACTATCTGTGTAGCGAAAAAATTTACAATAAATTTACCAGACATTTACCATAAGGAGATTTCAGTAACAACAGGAGAAAGATAAAATAGCCATTGAACAAACAAAAGGAAAGGTAAAAAGGAGCCGGATAAAAAGGTAAGTTAAGGCTTCAAAAGGAGAAAATCTACAGTGGGATGTCGTGTGGATCGATTCCATGCAGGCAGGTGTGCTTGTATACCGCAAGATGTGTGGAGCGAGGCAGATGTAACAAAAACACAGAGAACTCTTTCTGTATGGTTTAAAACCGTCAGGGGGAGTTCTTTTTTATTTAAAGATTGTAAACGTTTGCAGGAAAATAAAGATAATTGCAAAATTACGAATAAAAACATACATAAAAAAACGAAACAAACAGTGGAAAAATAAGGAAAATACCATCTGCCATGCAAACGATTACACAATCCGTCGT GAGAAAACAGGTCACGAGCCTGTTTT 26 TTerm_0196 NZ_LR027880.1 1335842 1335867 26 1335875 1335900 26 7 76 0 22 57 42 55 45 0 1335870 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True + AAAAATAAAAGCCCCTGTTCTGCCTG TGAATTC CAGGCAAAGCAGGGGATATCAATTTT GGGTATCAA 76 RIL182_RS06235 intergenic 1335694 1336038 + down AAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAACATAAAAGATACAAAAAAGAAATATTAATGTTCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA CACAGGCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAACATAAAAGATACAAAAAAGAAATATTAATGTTCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA AAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAACATAAAAGATACAAAAAAGAAATATTAATGTTCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTT 206 TTerm_0197 NZ_LR027880.1 1350557 1350572 16 1350577 1350592 16 4 93 0 27 59 40 60 40 0 1350574 TAAAAAAGAGTGCCGG CCGACACTCTTTTTTA True ATACAACAT AATCCATTG True True + TAAAAAAGAGTGCCGG AAAG CCGACACTCTTTTTTA AATCCATTG 86 RIL182_RS06295 intergenic 1350400 1350690 - down ATTACTACCAGCACAATCAGTAGTTTCACATGTACCTTTTTCTTTTTAAATAGAACCAGTTTTTATTTGTTAGATTAAGATATTGTAAACAATGGATTTAAAAAAGAGTGTCGGCTTTCCGGCACTCTTTTTTATGTTGTATTGAAGCAGAGCATAAAAAGTCCACATAAACTGGTCTGCTCATTTTTCACTTAACTGGCATTTTAAAATAAACCAGTGTGCGTTTAAGATAGGCATAAACAAATGACTGTTAAAAATCGGTCATACGAAACAAATGAGGAGAAAAGAAT CAACCAACGTTACAGTAGTAAAATAATTACTACCAGCACAATCAGTAGTTTCACATGTACCTTTTTCTTTTTAAATAGAACCAGTTTTTATTTGTTAGATTAAGATATTGTAAACAATGGATTTAAAAAAGAGTGTCGGCTTTCCGGCACTCTTTTTTATGTTGTATTGAAGCAGAGCATAAAAAGTCCACATAAACTGGTCTGCTCATTTTTCACTTAACTGGCATTTTAAAATAAACCAGTGTGCGTTTAAGATAGGCATAAACAAATGACTGTTAAAAATCGGTCATACGAAACAAATGAGGAGAAAAGAATATGAGCACAACATCTACAACAGCTG ATTCTTTTCTCCTCATTTGTTTCGTATGACCGATTTTTAACAGTCATTTGTTTATGCCTATCTTAAACGCACACTGGTTTATTTTAAAATGCCAGTTAAGTGAAAAATGAGCAGACCAGTTTATGTGGACTTTTTATGCTCTGCTTCAATACAACATAAAAAAGAGTGCCGGAAAGCCGACACTCTTTTTTA 192 TTerm_0198 NZ_LR027880.1 1365829 1365834 6 1365843 1365848 6 8 100 0 12 66 33 66 33 0 1365838 CGTAAA TTTACG True GGTCCACTC GCACTTTTT False True + CGTAAA GTGCCGTA TTTACG GCACTTTTT 40 RIL182_RS06365 intergenic 1365829 1365974 + down GTAAAGTGCCGTATTTACGGCACTTTTTAAATTTTGTGTTGCATTTCGTGACATATTTTATGTCATACTGATATAAAATAAGGACCACCATTGAAGGAAGTCCTGATTTATTCATAACAATAGAATGTTCGCAGAGCGTGTATTC GGTTCGACTCCCGTCAGGTCCACTCGTAAAGTGCCGTATTTACGGCACTTTTTAAATTTTGTGTTGCATTTCGTGACATATTTTATGTCATACTGATATAAAATAAGGACCACCATTGAAGGAAGTCCTGATTTATTCATAACAATAGAATGTTCGCAGAGCGTGTATTCTATTGCTTTAACAGCTCTGTAATGT GTAAAGTGCCGTATTTACG 19 TTerm_0199 NZ_LR027880.1 1365829 1365834 6 1365843 1365848 6 8 100 0 12 66 33 66 33 0 1365838 CGTAAA TTTACG True GGTCCACTC GCACTTTTT False True + CGTAAA GTGCCGTA TTTACG GCACTTTTT 40 RIL182_RS06370 intergenic 1365829 1365974 - down GAATACACGCTCTGCGAACATTCTATTGTTATGAATAAATCAGGACTTCCTTCAATGGTGGTCCTTATTTTATATCAGTATGACATAAAATATGTCACGAAATGCAACACAAAATTTAAAAAGTGCCGTAAATACGGCACTTTAC ACATTACAGAGCTGTTAAAGCAATAGAATACACGCTCTGCGAACATTCTATTGTTATGAATAAATCAGGACTTCCTTCAATGGTGGTCCTTATTTTATATCAGTATGACATAAAATATGTCACGAAATGCAACACAAAATTTAAAAAGTGCCGTAAATACGGCACTTTACGAGTGGACCTGACGGGAGTCGAACC GTAAAGTGCCGTATTTACG 19 TTerm_0200 NZ_LR027880.1 1370910 1370915 6 1370925 1370930 6 9 100 0 12 50 50 50 50 0 1370919 CAGGAA TTCCTG True CTGACGGAC ACTGTTTTG False True + CAGGAA AGGGTATTG TTCCTG ACTGTTTTG 48 RIL182_RS06395 intergenic 1370905 1371036 + down CGGACAGGAAAGGGTATTGTTCCTGACTGTTTTGAATAGTAACAGTCGGCTACCAGAAAAAATTTGCTTATGCAGGAAAGAAAACCTGCAGGGCAAATGAGATAGAAGATAAGAAAAGAGGGAATATAGCA AGATCTGTTTGACAAGATCATCTGACGGACAGGAAAGGGTATTGTTCCTGACTGTTTTGAATAGTAACAGTCGGCTACCAGAAAAAATTTGCTTATGCAGGAAAGAAAACCTGCAGGGCAAATGAGATAGAAGATAAGAAAAGAGGGAATATAGCATGCAGATTTACGAAGTTACGGATGC CGGACAGGAAAGGGTATTGTTCCTG 25 TTerm_0201 NZ_LR027880.1 1373225 1373245 21 1373254 1373274 21 8 85 0 27 50 50 50 50 0 1373249 AAAACCCGTGCGTCTAAAACG CGTTTTGGATGCGCGGGTTTT True ATTACCTGA ATTTTTGAT True True + AAAACCCGTGCGTCTAAAACG TAACATAC CGTTTTGGATGCGCGGGTTTT ATTTTTGAT 70 RIL182_RS06405 intergenic 1373197 1373642 + down AATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATAT TCCGACAGAGAATCCATTTGCATAAAATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATATTGACAGTTAGTTATGATAAGCTATG AATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTT 77 TTerm_0202 NZ_LR027880.1 1373335 1373342 8 1373347 1373354 8 4 87 0 11 87 12 85 14 0 1373344 AATATCAA TTGATTTT True TTTTTCAGA TTCAAGTTC False True + AATATCAA TTTC TTGATTTT TTCAAGTTC 30 RIL182_RS06405 intergenic 1373197 1373642 + down AATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATAT TCCGACAGAGAATCCATTTGCATAAAATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATATTGACAGTTAGTTATGATAAGCTATG AATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTT 157 TTerm_0203 NZ_LR027880.1 1386054 1386065 12 1386071 1386082 12 5 83 0 14 83 16 90 10 0 1386067 GATAAGAAAAAA TTTTTTGTTTTC True AGCAAACTG GATGTAGGA False True + GATAAGAAAAAA TAATG TTTTTTGTTTTC GATGTAGGA 28 RIL182_RS06450 intergenic 1385790 1386105 + down TGATCTATGGGAAAATATGGATGCGCAACCGATTGAAAAAAATTGTGAAGAATTTAAAAATAAAGGTAAAAAAAAGGGTAAATCATGTATTTTTGCACAAGTATAAATATGCATTTTTTACAAGAGAGAAAAATACATGTTAAAAATTTGTCATACCGTGTCGAAATAAAATCCAATATTGTCATTTTGCTGATAAATCAAGGAATATCAGGGATTTTTCATAAATTGACAAATGAAAAAAAATGTGCAATAATCAGCAAACTGATAAGAAAAAATAATGTTTTTTGTTTTCGATGTAGGAAGGAATGAGTCGAA TCTGGCAATAAGAAGGATTTTCTAATGATCTATGGGAAAATATGGATGCGCAACCGATTGAAAAAAATTGTGAAGAATTTAAAAATAAAGGTAAAAAAAAGGGTAAATCATGTATTTTTGCACAAGTATAAATATGCATTTTTTACAAGAGAGAAAAATACATGTTAAAAATTTGTCATACCGTGTCGAAATAAAATCCAATATTGTCATTTTGCTGATAAATCAAGGAATATCAGGGATTTTTCATAAATTGACAAATGAAAAAAAATGTGCAATAATCAGCAAACTGATAAGAAAAAATAATGTTTTTTGTTTTCGATGTAGGAAGGAATGAGTCGAATGATTGAAAGAAAAATCAAATTATC TGATCTATGGGAAAATATGGATGCGCAACCGATTGAAAAAAATTGTGAAGAATTTAAAAATAAAGGTAAAAAAAAGGGTAAATCATGTATTTTTGCACAAGTATAAATATGCATTTTTTACAAGAGAGAAAAATACATGTTAAAAATTTGTCATACCGTGTCGAAATAAAATCCAATATTGTCATTTTGCTGATAAATCAAGGAATATCAGGGATTTTTCATAAATTGACAAATGAAAAAAAATGTGCAATAATCAGCAAACTGATAAGAAAAAATAATGTTTTTTGTTTTC 292 TTerm_0204 NZ_LR027880.1 1400941 1400952 12 1400957 1400968 12 4 91 0 19 20 79 18 81 0 1400954 CAGGTCCGGTCC GGACCGGGCCTG True ACTTTTAGC TTTTTATAC False True + CAGGTCCGGTCC TATT GGACCGGGCCTG TTTTTATAC 78 RIL182_RS06500 intergenic 1400906 1401007 + down TCGACGGGTTACGATAACTATATGCGACTTTTAGCAGGTCCGGTCCTATTGGACCGGGCCTGTTTTTATACCTCAATTATATAAAAGGAGGACATATTTTA CAAATACTTCAGTGAGTTAGCATAATCGACGGGTTACGATAACTATATGCGACTTTTAGCAGGTCCGGTCCTATTGGACCGGGCCTGTTTTTATACCTCAATTATATAAAAGGAGGACATATTTTATGTCATTAAACAAAAAATCAGTAGA TCGACGGGTTACGATAACTATATGCGACTTTTAGCAGGTCCGGTCCTATTGGACCGGGCCTG 62 TTerm_0205 NZ_LR027880.1 1416321 1416333 13 1416338 1416350 13 4 84 0 16 69 30 72 27 0 1416335 AAAAACTACAAAG CTTTGCGGTTTTT True ATGGTTTGA GGTGAATAA True True + AAAAACTACAAAG ACGG CTTTGCGGTTTTT GGTGAATAA 56 RIL182_RS06560 intergenic 1416261 1416500 + down GGTTTTAAAAAAAGACTATAGAAACCGCTCTGCCGTCTTCGGAGAGTAAAAATGGTTTGAAAAACTACAAAGACGGCTTTGCGGTTTTTGGTGAATAAAAGATTGTGAAAGACGGTAGAAACCGCTCTGCCGTCTTCGGAGAGTAATAAAAATCATTGCGAAACCCGTCAGCAGCTTAACGTGAGAAGAGTTTGAGGTGGGTTTCGCAGAGTTTATATGACACTAAAGGAGGGTATCAA CTATAGAGCGGTTTTCGGTGACTAAGGTTTTAAAAAAAGACTATAGAAACCGCTCTGCCGTCTTCGGAGAGTAAAAATGGTTTGAAAAACTACAAAGACGGCTTTGCGGTTTTTGGTGAATAAAAGATTGTGAAAGACGGTAGAAACCGCTCTGCCGTCTTCGGAGAGTAATAAAAATCATTGCGAAACCCGTCAGCAGCTTAACGTGAGAAGAGTTTGAGGTGGGTTTCGCAGAGTTTATATGACACTAAAGGAGGGTATCAATGACTATCACAGAACTGAAGCAGAC GGTTTTAAAAAAAGACTATAGAAACCGCTCTGCCGTCTTCGGAGAGTAAAAATGGTTTGAAAAACTACAAAGACGGCTTTGCGGTTTTT 89 TTerm_0206 NZ_LR027880.1 1420311 1420318 8 1420325 1420332 8 6 87 0 11 87 12 85 14 0 1420321 TTATGAAT ATACATAA True TGGTTATAT CCATTTTTA False True + TTATGAAT ATAACC ATACATAA CCATTTTTA 30 RIL182_RS06585 intergenic 1420264 1420496 + down AAGAAAACTGATTGATACGAATTGACAATGGTTATGTATGGTTATATTATGAATATAACCATACATAACCATTTTTAATGCATAGGAGTATGAGATTGCAGATGGAGGAATAGAATACGAAATCCGAAAGATCGTATCAGAGAGATAGATAACCGGTTAGAACAACTGCCGAAGGGAACACTGACTTATAAGAATATTAACGGTAAAAAACAGCCGTATATCCAGCGGACAG GGAGGGGCTTGCAGGGAAACATTGAAAGAAAACTGATTGATACGAATTGACAATGGTTATGTATGGTTATATTATGAATATAACCATACATAACCATTTTTAATGCATAGGAGTATGAGATTGCAGATGGAGGAATAGAATACGAAATCCGAAAGATCGTATCAGAGAGATAGATAACCGGTTAGAACAACTGCCGAAGGGAACACTGACTTATAAGAATATTAACGGTAAAAAACAGCCGTATATCCAGCGGACAGTGGAGGGAAAGTCAGTCAGCTGTTA AAGAAAACTGATTGATACGAATTGACAATGGTTATGTATGGTTATATTATGAATATAACCATACATAA 68 TTerm_0207 NZ_LR027880.1 1438828 1438853 26 1438861 1438886 26 7 76 0 22 57 42 55 45 0 1438856 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True + AAAAATAAAAGCCCCTGTTCTGCCTG TGAATTC CAGGCAAAGCAGGGGATATCAATTTT GGGTATCAA 76 RIL182_RS22380 intergenic 1438714 1439024 + down TAAGCAAAATCACAGGGTATCAAACAGTTCATGGCTAATTAAAGGGAACAAAAAGAAAGGAAAAGCACAATCCAGACGGTATCAGCGGCAGGCTACACAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA ACTTCTATTACTTCTTTATCACACATAAGCAAAATCACAGGGTATCAAACAGTTCATGGCTAATTAAAGGGAACAAAAAGAAAGGAAAAGCACAATCCAGACGGTATCAGCGGCAGGCTACACAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA TAAGCAAAATCACAGGGTATCAAACAGTTCATGGCTAATTAAAGGGAACAAAAAGAAAGGAAAAGCACAATCCAGACGGTATCAGCGGCAGGCTACACAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTT 172 TTerm_0208 NZ_LR027880.1 1444313 1444318 6 1444323 1444328 6 4 100 0 12 16 83 16 83 0 1444320 GCTGGC GCCAGC True TCCCCTGCG TACCCTTTT False True + GCTGGC TGCC GCCAGC TACCCTTTT 64 RIL182_RS06735 intergenic 1444177 1444486 + down TTTACTAAGGGCGCAATTATACACCACCCAGAGGTTGGTGCATTGCGTTCTCCGAAGGCTCCTTGCCGGAGGGCTGTGATTTTCCGCAGTCAAGGTCTGCTCCAAATCATACAGGGGACGCTACGCTTCCCCTGCGCTGGCTGCCGCCAGCTACCCTTTTGTGAACTTGCCATCTGGGGACACCTTGCGCTGCAAGCTGTTCCCAGCCGACAGGTTTTACAACTCTCTCTGTACTTTGATGGTCGAATAAAGTATAATGAAGTCGACGACAAATCGGAAGTGGCTTATTGTATTGGGAAGGAGAAGTTA ACGGGAGAAGCCGGAAACCCCTTAGTTTACTAAGGGCGCAATTATACACCACCCAGAGGTTGGTGCATTGCGTTCTCCGAAGGCTCCTTGCCGGAGGGCTGTGATTTTCCGCAGTCAAGGTCTGCTCCAAATCATACAGGGGACGCTACGCTTCCCCTGCGCTGGCTGCCGCCAGCTACCCTTTTGTGAACTTGCCATCTGGGGACACCTTGCGCTGCAAGCTGTTCCCAGCCGACAGGTTTTACAACTCTCTCTGTACTTTGATGGTCGAATAAAGTATAATGAAGTCGACGACAAATCGGAAGTGGCTTATTGTATTGGGAAGGAGAAGTTATGGACAGAATGGTAATTGCAGGTGG TTTACTAAGGGCGCAATTATACACCACCCAGAGGTTGGTGCATTGCGTTCTCCGAAGGCTCCTTGCCGGAGGGCTGTGATTTTCCGCAGTCAAGGTCTGCTCCAAATCATACAGGGGACGCTACGCTTCCCCTGCGCTGGCTGCCGCCAGC 151 TTerm_0209 NZ_LR027880.1 1445227 1445239 13 1445245 1445257 13 5 84 0 16 53 46 54 45 0 1445241 AAGCAGGAAATCT AGGTTGCCTGCTT True GGCACACCA TTTTTCTGC False True + AAGCAGGAAATCT GAAAA AGGTTGCCTGCTT TTTTTCTGC 56 RIL182_RS06740 intergenic 1445139 1445326 + down AAAACTTTCAATTTGCCACCCACACATCGGGTCAATTTGTCCCGAACTTTTACAACTAAATACCCGCCGCCCACACAGCGGCACACCAAGCAGGAAATCTGAAAAAGGTTGCCTGCTTTTTTTCTGCCCAAAATGAGGTGGTAAAGCGCCACCCCATCCACCAATTACCGAAAGGAGGGACACGAAA TTTTAATCTAGGAAGTATAAAGTAGAAAACTTTCAATTTGCCACCCACACATCGGGTCAATTTGTCCCGAACTTTTACAACTAAATACCCGCCGCCCACACAGCGGCACACCAAGCAGGAAATCTGAAAAAGGTTGCCTGCTTTTTTTCTGCCCAAAATGAGGTGGTAAAGCGCCACCCCATCCACCAATTACCGAAAGGAGGGACACGAAATGCCCTGTCCACACAACGAAATCAC AAAACTTTCAATTTGCCACCCACACATCGGGTCAATTTGTCCCGAACTTTTACAACTAAATACCCGCCGCCCACACAGCGGCACACCAAGCAGGAAATCTGAAAAAGGTTGCCTGCTT 118 TTerm_0210 NZ_LR027880.1 1446910 1446924 15 1446930 1446944 15 5 80 0 15 50 50 50 50 0 1446926 GCACTTGCCATTTTC GAGAATGTCAGGTGC True TTTAACAGG TTTTCTTAT False True + GCACTTGCCATTTTC AATCA GAGAATGTCAGGTGC TTTTCTTAT 46 RIL182_RS06745 intergenic 1446906 1446972 + down CAGGCACTTGCCATTTTCAATCAGAGAATGTCAGGTGCTTTTCTTATTTTCAAGGAGGGATAGATT CAGACAACAGGATATGGAACTTTAACAGGCACTTGCCATTTTCAATCAGAGAATGTCAGGTGCTTTTCTTATTTTCAAGGAGGGATAGATTTGAATGTATTTGAAGCTGTGAAGCA CAGGCACTTGCCATTTTCAATCAGAGAATGTCAGGTGC 38 TTerm_0211 NZ_LR027880.1 1466017 1466029 13 1466037 1466049 13 7 92 0 21 65 34 66 33 0 1466032 TAGAGCGTATAGA TCTATATGCTCTA True AACAGCGTT TTTTTTTAC False True + TAGAGCGTATAGA ATAGAAA TCTATATGCTCTA TTTTTTTAC 50 RIL182_RS06825 intergenic 1465862 1466089 + down TTATAGGGTATTGAGGAAGTAGTGGACAGAAATATTGGTATTGGAGATATGCAATTTATGTTCCACAAAAAGTGTGAAAACTTCAGATTTATGGTCATTTCCATAAATTTATTTACCTTTTTCACATCACTAATAATTTTATAGTAAACAGCGTTAGAGCGTATAGAATAGAAATCTATATGCTCTATTTTTTTACGCAAATAAAAGAAAACAGGAGGAAATCTACA GATTAAATTATTAAAGGTTATTTAATTATAGGGTATTGAGGAAGTAGTGGACAGAAATATTGGTATTGGAGATATGCAATTTATGTTCCACAAAAAGTGTGAAAACTTCAGATTTATGGTCATTTCCATAAATTTATTTACCTTTTTCACATCACTAATAATTTTATAGTAAACAGCGTTAGAGCGTATAGAATAGAAATCTATATGCTCTATTTTTTTACGCAAATAAAAGAAAACAGGAGGAAATCTACATGAATGAAGCAGTAGAAAATGTAAC TTATAGGGTATTGAGGAAGTAGTGGACAGAAATATTGGTATTGGAGATATGCAATTTATGTTCCACAAAAAGTGTGAAAACTTCAGATTTATGGTCATTTCCATAAATTTATTTACCTTTTTCACATCACTAATAATTTTATAGTAAACAGCGTTAGAGCGTATAGAATAGAAATCTATATGCTCTA 187 TTerm_0212 NZ_LR027880.1 1476200 1476211 12 1476216 1476227 12 4 91 0 19 70 29 72 27 0 1476213 AAAAGACAATCA TGGTTGTCTTTT True ACTACCTGA TTGGTTTGC True True + AAAAGACAATCA GAAA TGGTTGTCTTTT TTGGTTTGC 62 RIL182_RS06840 intergenic 1476150 1476713 + down CGAAGTAATATAGGATAGCTATATATCAAAATTTAATAGGCACTACCTGAAAAGACAATCAGAAATGGTTGTCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCA CGAAGTAATATAGGATAGCTATATATCAAAATTTAATAGGCACTACCTGAAAAGACAATCAGAAATGGTTGTCTTTT 77 TTerm_0213 NZ_LR027880.1 1484371 1484391 21 1484399 1484419 21 7 90 0 32 61 38 63 36 0 1484394 AAAGCCAGACTGTTTTCAGTA TATTGAAAGCAGTCTGGCTTT True TTTAATACA TTTGGAAAG False True + AAAGCCAGACTGTTTTCAGTA GAATAAA TATTGAAAGCAGTCTGGCTTT TTTGGAAAG 72 RIL182_RS06865 intergenic 1484311 1484439 + down GGAAAATTTAACGAAATCCTTTATCAAATCTTAGGAAATTAACATCTTGAATTTAATACAAAGCCAGACTGTTTTCAGTAGAATAAATATTGAAAGCAGTCTGGCTTTTTTGGAAAGGAGATTTGAAA GCCGGATGCAAAAATTCAACTATGAGGAAAATTTAACGAAATCCTTTATCAAATCTTAGGAAATTAACATCTTGAATTTAATACAAAGCCAGACTGTTTTCAGTAGAATAAATATTGAAAGCAGTCTGGCTTTTTTGGAAAGGAGATTTGAAATGGAATTATCTATTGAAGAATTAAA GGAAAATTTAACGAAATCCTTTATCAAATCTTAGGAAATTAACATCTTGAATTTAATACAAAGCCAGACTGTTTTCAGTAGAATAAATATTGAAAGCAGTCTGGCTTT 108 TTerm_0214 NZ_LR027880.1 1487975 1487994 20 1488000 1488019 20 5 85 0 25 57 42 52 47 0 1487996 AAGGTGTATCGCAAAGAAGT ACTTCAATGCGGTACACCTT True CACACATCA TTTTGATGG False True + AAGGTGTATCGCAAAGAAGT AAAAA ACTTCAATGCGGTACACCTT TTTTGATGG 66 RIL182_RS06895 intergenic 1487813 1488034 - down ATTTCTCCATCAAAAAAGGTGTACCGCATTGAAGTTTTTTACTTCTTTGCGATACACCTTGATGTGTGTAATAATCCGTTGCAATATTTCTTTCCACTATTCTTTTCCTATACAATTTAATGTATTTTCTTTTCATGTATTGTACTCCATATTTATACTGTATTTTGTTGCAATTCACGTCATTCAATATGTAATGTAAACTACTATTGAGGTGAATTATA CGGAAAAGGACTCCACCATGCTCTGATTTCTCCATCAAAAAAGGTGTACCGCATTGAAGTTTTTTACTTCTTTGCGATACACCTTGATGTGTGTAATAATCCGTTGCAATATTTCTTTCCACTATTCTTTTCCTATACAATTTAATGTATTTTCTTTTCATGTATTGTACTCCATATTTATACTGTATTTTGTTGCAATTCACGTCATTCAATATGTAATGTAAACTACTATTGAGGTGAATTATAATGCAGGACATAAAACAATTACTTG TATAATTCACCTCAATAGTAGTTTACATTACATATTGAATGACGTGAATTGCAACAAAATACAGTATAAATATGGAGTACAATACATGAAAAGAAAATACATTAAATTGTATAGGAAAAGAATAGTGGAAAGAAATATTGCAACGGATTATTACACACATCAAGGTGTATCGCAAAGAAGTAAAAAACTTCAATGCGGTACACCTT 206 TTerm_0215 NZ_LR027880.1 1490732 1490739 8 1490744 1490751 8 4 87 0 11 56 43 57 42 0 1490741 TTTGGACT AGTCCGAA True ATGTGCTTT GTTGATTTT False True + TTTGGACT GATA AGTCCGAA GTTGATTTT 54 RIL182_RS06905 intergenic 1490660 1491160 + down ACTTGTCATTCTTGTAAAGCACATAATTTTTACAACACCGTTCATAGCAGACGGAAGTGGCTTATGTGCTTTTTGGACTGATAAGTCCGAAGTTGATTTTATCCAAAATACAGGCGTGAGCCTGTAAGTGTACCTTGACAATTTTATAGACAAATGCGTACAGGACGTGTGGAATATGTGGAGCCACTATGCGGACACGCCAAGAGCTGTCTGCTTTCCTATACAAATAAGGAAGGTTCTTATACGAAGAAATGCTGAAATAGGGTATTGAAGTAAAGACAAGGAGCGATAAATGTCTGGCAAAAAGTGAAGCAGTTGCACAGGGCGATGATACATATTTTTAATAATGATACTTCTGGAGATTTCCGGTCAACAAGGATTGACGGTGCGATACCGATGTGGGCGGTGTAATGAGCTGCCACCTGTACTGTATTTAAAAAATTTGTCTGCTGATGAGAGCCGGGAAAAGTTTTCGTGGTTGTCATGGGCAGATAAAGTCA TGGACCGGATAAACTGGAACTCTAAACTTGTCATTCTTGTAAAGCACATAATTTTTACAACACCGTTCATAGCAGACGGAAGTGGCTTATGTGCTTTTTGGACTGATAAGTCCGAAGTTGATTTTATCCAAAATACAGGCGTGAGCCTGTAAGTGTACCTTGACAATTTTATAGACAAATGCGTACAGGACGTGTGGAATATGTGGAGCCACTATGCGGACACGCCAAGAGCTGTCTGCTTTCCTATACAAATAAGGAAGGTTCTTATACGAAGAAATGCTGAAATAGGGTATTGAAGTAAAGACAAGGAGCGATAAATGTCTGGCAAAAAGTGAAGCAGTTGCACAGGGCGATGATACATATTTTTAATAATGATACTTCTGGAGATTTCCGGTCAACAAGGATTGACGGTGCGATACCGATGTGGGCGGTGTAATGAGCTGCCACCTGTACTGTATTTAAAAAATTTGTCTGCTGATGAGAGCCGGGAAAAGTTTTCGTGGTTGTCATGGGCAGATAAAGTCATGCAGAGAATTAGAGAAATGGAGGT ACTTGTCATTCTTGTAAAGCACATAATTTTTACAACACCGTTCATAGCAGACGGAAGTGGCTTATGTGCTTTTTGGACTGATAAGTCCGAA 91 TTerm_0216 NZ_LR027880.1 1499765 1499775 11 1499783 1499793 11 7 90 0 17 68 31 70 30 0 1499778 GAAAGATGATG CATCATTTTTC True AGAGAGCGG AATGCGGGT False True + GAAAGATGATG AGAACGA CATCATTTTTC AATGCGGGT 50 RIL182_RS06925 intergenic 1499457 1499993 + down TGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATA AACCTGCAAAATTACTGTAAAATAATGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATATGGAATTCATGACAGGTGTAAACAA TGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTC 336 TTerm_0217 NZ_LR027880.1 1501384 1501394 11 1501399 1501409 11 4 81 0 12 77 22 88 11 0 1501396 CAAAATTGAAT ATTGAGTTTTG True ATCAGGTTC CAAACAGGG True True + CAAAATTGAAT GTAA ATTGAGTTTTG CAAACAGGG 40 RIL182_RS06930 intergenic 1501324 1501525 + down TCAGGTTAGAACAGATGCAAAGAATCCAAAACAAAATAATTTTAGATCCATATCAGGTTCAAAATTGAATGTAAATTGAGTTTTGCAAACAGGGATCATATGAATGAAAAAGGAGAACAGCCGTGAAACATTTGGGAACAAAAACAATCGAAACAAGACGTCTTGTTTTAAGACGATTTACACTTTCCGATGCAGAACCGA TGATTTAAGCAGATTAGAGCCGTAATCAGGTTAGAACAGATGCAAAGAATCCAAAACAAAATAATTTTAGATCCATATCAGGTTCAAAATTGAATGTAAATTGAGTTTTGCAAACAGGGATCATATGAATGAAAAAGGAGAACAGCCGTGAAACATTTGGGAACAAAAACAATCGAAACAAGACGTCTTGTTTTAAGACGATTTACACTTTCCGATGCAGAACCGATGTACCGCAACTGGGCATCGGATCC TCAGGTTAGAACAGATGCAAAGAATCCAAAACAAAATAATTTTAGATCCATATCAGGTTCAAAATTGAATGTAAATTGAGTTTTG 85 TTerm_0218 NZ_LR027880.1 1505384 1505398 15 1505406 1505420 15 7 100 0 30 73 26 73 26 0 1505401 AAAAATATGAGGACT AGTCCTCATATTTTT True ATGTGTATA GCGATAGCT True True + AAAAATATGAGGACT GAAAAAA AGTCCTCATATTTTT GCGATAGCT 84 RIL182_RS06945 intergenic 1505351 1505685 + down GGTATTATATTTGATACCAACATCATGTGTATAAAAATATGAGGACTGAAAAAAAGTCCTCATATTTTTGCGATAGCTTGACAATCTTGTTTATGCGTGCATATACTAAGATAATTGCGAAACTCATTCATGAACTGGCGATGTTGTGGAAAATTGACAGATGAAAAAGAAAGTGCTGGGGAGCCGTCGGTACTTAGTGACTGTATTTTGGTCACTTAGTATCCGCTACGAGCGACACGCAGCGAGAGCGTGCTTTCGTTTCAGCTGTCAATTTCCCACAACGTTCACAGCCTAAAGCAGAGTTTCGCCCAGGTAACTGTTTTATTGAATAGCA CCAGATATTAAAAGAGTTACTGTAAGGTATTATATTTGATACCAACATCATGTGTATAAAAATATGAGGACTGAAAAAAAGTCCTCATATTTTTGCGATAGCTTGACAATCTTGTTTATGCGTGCATATACTAAGATAATTGCGAAACTCATTCATGAACTGGCGATGTTGTGGAAAATTGACAGATGAAAAAGAAAGTGCTGGGGAGCCGTCGGTACTTAGTGACTGTATTTTGGTCACTTAGTATCCGCTACGAGCGACACGCAGCGAGAGCGTGCTTTCGTTTCAGCTGTCAATTTCCCACAACGTTCACAGCCTAAAGCAGAGTTTCGCCCAGGTAACTGTTTTATTGAATAGCATGGAAAGAAGGAGCAAAATGACCTA GGTATTATATTTGATACCAACATCATGTGTATAAAAATATGAGGACTGAAAAAAAGTCCTCATATTTTT 69 TTerm_0219 NZ_LR027880.1 1506251 1506270 20 1506275 1506294 20 4 100 0 40 70 30 70 30 0 1506272 AAAACGGGCATATATAAAGT ACTTTATATATGCCCGTTTT True TGGAGACTA TCATGCAAA True True + AAAACGGGCATATATAAAGT TTTC ACTTTATATATGCCCGTTTT TCATGCAAA 88 RIL182_RS06950 intergenic 1506218 1506307 + down AATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTTTCATGCAAAATGT GAAACAGATTCGTTCAGAATTATAGAATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTTTCATGCAAAATGTTAGCCTTCCGCAAGATTTCCCGTGT AATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTT 76 TTerm_0220 NZ_LR027880.1 1506251 1506270 20 1506275 1506294 20 4 100 0 40 70 30 70 30 0 1506272 AAAACGGGCATATATAAAGT ACTTTATATATGCCCGTTTT True TGGAGACTA TCATGCAAA True True + AAAACGGGCATATATAAAGT TTTC ACTTTATATATGCCCGTTTT TCATGCAAA 88 RIL182_RS06955 intergenic 1506218 1506307 - down ACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTTTAGTCTCCATTTTTGGTCAAACTCACAAACATT ACACGGGAAATCTTGCGGAAGGCTAACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTTTAGTCTCCATTTTTGGTCAAACTCACAAACATTCTATAATTCTGAACGAATCTGTTTC AATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTT 76 TTerm_0221 NZ_LR027880.1 1535812 1535826 15 1535833 1535847 15 6 100 0 30 60 40 60 40 0 1535829 AAAATACTGCCGGAT ATCCGGCAGTATTTT True AAAAACATA TTATTCCAG True True + AAAATACTGCCGGAT TGATGG ATCCGGCAGTATTTT TTATTCCAG 92 RIL182_RS07095 intergenic 1535779 1535867 + down AAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTTTTATTCCAGTATTTTATTGT CTGCTGTTGTTTAAGGCCGTTTTAGAAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTTTTATTCCAGTATTTTATTGTTAACGGCGGTTTGGATTTGTATATT AAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTT 68 TTerm_0222 NZ_LR027880.1 1535812 1535826 15 1535833 1535847 15 6 100 0 30 60 40 60 40 0 1535829 AAAATACTGCCGGAT ATCCGGCAGTATTTT True AAAAACATA TTATTCCAG True True + AAAATACTGCCGGAT TGATGG ATCCGGCAGTATTTT TTATTCCAG 92 RIL182_RS07100 intergenic 1535779 1535867 - down ACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTTTATGTTTTTCCGTGGCAAGACTTTATCCCGCTT AATATACAAATCCAAACCGCCGTTAACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTTTATGTTTTTCCGTGGCAAGACTTTATCCCGCTTCTAAAACGGCCTTAAACAACAGCAG AAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTT 68 TTerm_0223 NZ_LR027880.1 1537255 1537261 7 1537268 1537274 7 6 100 0 14 57 42 57 42 0 1537264 ATGCTGA TCAGCAT True CTTATGTGA TTTTTCTAT False True + ATGCTGA CTTTTT TCAGCAT TTTTTCTAT 52 RIL182_RS07110 intergenic 1537236 1537408 - down AAATTTTTATTTTCAATTACTGATATATAACCTTCCCTGTCTGAAAATATCTGAAAACGGACGCATATTTTATCAATATAACGTAAATTTTTTTCTTCTTGAAATCAGATGGTGATTATTATATGATAGAAAAAATGCTGAAAAAAGTCAGCATCACATAAGGAGGATTTAT GGTGTAACACCTCGGAATCCCCCTGAAATTTTTATTTTCAATTACTGATATATAACCTTCCCTGTCTGAAAATATCTGAAAACGGACGCATATTTTATCAATATAACGTAAATTTTTTTCTTCTTGAAATCAGATGGTGATTATTATATGATAGAAAAAATGCTGAAAAAAGTCAGCATCACATAAGGAGGATTTATATGCGTCATTTAATGAGCCCATTGG ATAAATCCTCCTTATGTGATGCTGACTTTTTTCAGCAT 38 TTerm_0224 NZ_LR027880.1 1551503 1551521 19 1551529 1551547 19 7 89 0 28 52 47 52 47 0 1551524 AAAAAGACGGAATCAGCCA TGGCGGGTTCCGTCTTTTT True AATCATAGA GCAAAACAG True True + AAAAAGACGGAATCAGCCA ATTTTTA TGGCGGGTTCCGTCTTTTT GCAAAACAG 96 RIL182_RS07170 intergenic 1551502 1551610 + down AAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTTGCAAAACAGTTATTGTTTTCGGCAGCCAGTGTGGTAGTCAGCGGAGGATTGGTTCTTCTGCTT TGCGGCAATGGCGGATGAATCATAGAAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTTGCAAAACAGTTATTGTTTTCGGCAGCCAGTGTGGTAGTCAGCGGAGGATTGGTTCTTCTGCTTTACAGGTATATCGGGCTTACAGGTG AAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTT 45 TTerm_0225 NZ_LR027880.1 1551503 1551521 19 1551529 1551547 19 7 89 0 28 52 47 52 47 0 1551524 AAAAAGACGGAATCAGCCA TGGCGGGTTCCGTCTTTTT True AATCATAGA GCAAAACAG True True + AAAAAGACGGAATCAGCCA ATTTTTA TGGCGGGTTCCGTCTTTTT GCAAAACAG 96 RIL182_RS22150 intergenic 1551502 1551610 - down AAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTTT CACCTGTAAGCCCGATATACCTGTAAAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTTTCTATGATTCATCCGCCATTGCCGCA AAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTT 45 TTerm_0226 NZ_LR027880.1 1558659 1558670 12 1558678 1558689 12 7 91 0 19 62 37 63 36 0 1558673 AAGCAGTAAATC GATTTGCTGCTT True GGCACATGA TTTTTGCGT False True + AAGCAGTAAATC CGAAAAA GATTTGCTGCTT TTTTTGCGT 54 RIL182_RS07225 intergenic 1558577 1558945 + down TAAAGAGTCGATAGACTAAAGTACCACCATCCTCTTTTATTTCAACTGAATATCCATCCCGCCGCACCGCAGCGGCACATGAAGCAGTAAATCCGAAAAAGATTTGCTGCTTTTTTTGCGTCCATTTTTGGCAAATTTCCAAAAGTTCCGTATTAGACAGTGAAACCAAAAAAGGCTGCCATTTTTTTCAGACAGCGGGCAAAACGCAGCTTCCGAAACGCCTTATTGTCGGGAAAGACCGAGCCGCCGGAAAAGTTCTTGCCGGAAAGTCCGTCCATTCTGCTCTTTTGTGGTTTGTAGGGAGTAAGGGAAAAACGCCAGCCCGCAGCCTTTTATAAAAAAAGCTGGTTATAGATTTTCTGAAAAAG TCTTTCAAGATTACCTAATAGTTAGTAAAGAGTCGATAGACTAAAGTACCACCATCCTCTTTTATTTCAACTGAATATCCATCCCGCCGCACCGCAGCGGCACATGAAGCAGTAAATCCGAAAAAGATTTGCTGCTTTTTTTGCGTCCATTTTTGGCAAATTTCCAAAAGTTCCGTATTAGACAGTGAAACCAAAAAAGGCTGCCATTTTTTTCAGACAGCGGGCAAAACGCAGCTTCCGAAACGCCTTATTGTCGGGAAAGACCGAGCCGCCGGAAAAGTTCTTGCCGGAAAGTCCGTCCATTCTGCTCTTTTGTGGTTTGTAGGGAGTAAGGGAAAAACGCCAGCCCGCAGCCTTTTATAAAAAAAGCTGGTTATAGATTTTCTGAAAAAGTGGCAGTAGCAAGTGAACGGCAGGC TAAAGAGTCGATAGACTAAAGTACCACCATCCTCTTTTATTTCAACTGAATATCCATCCCGCCGCACCGCAGCGGCACATGAAGCAGTAAATCCGAAAAAGATTTGCTGCTT 112 TTerm_0227 NZ_LR027880.1 1566926 1566948 23 1566955 1566977 23 6 95 0 41 63 36 63 36 0 1566951 AAATAAAAACAGCCGCTGTAGGA TCCTACAACGGCTGTTTTTATTT True AGATTCATA CCACGGCCT True True + AAATAAAAACAGCCGCTGTAGGA ACAAAA TCCTACAACGGCTGTTTTTATTT CCACGGCCT 106 RIL182_RS07280 intergenic 1566927 1566972 + down ATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTT GTCTTTTGTTGGAGAAGATTCATAAATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTTTATTTCCACGGCCTGCGCCGGAAGT ATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTTTATTT 50 TTerm_0228 NZ_LR027880.1 1566926 1566948 23 1566955 1566977 23 6 95 0 41 63 36 63 36 0 1566951 AAATAAAAACAGCCGCTGTAGGA TCCTACAACGGCTGTTTTTATTT True AGATTCATA CCACGGCCT True True + AAATAAAAACAGCCGCTGTAGGA ACAAAA TCCTACAACGGCTGTTTTTATTT CCACGGCCT 106 RIL182_RS07285 intergenic 1566927 1566972 - down AAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTAT ACTTCCGGCGCAGGCCGTGGAAATAAAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTATTTATGAATCTTCTCCAACAAAAGAC ATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTTTATTT 50 TTerm_0229 NZ_LR027880.1 1571539 1571553 15 1571560 1571574 15 6 73 0 10 46 53 45 54 0 1571556 GCGCTTGCTATTTTC GAGAATGACAGGCGC True TTTAATAGG TTTTCTTAT False True + GCGCTTGCTATTTTC TTTTTC GAGAATGACAGGCGC TTTTCTTAT 36 RIL182_RS07315 intergenic 1571535 1571600 + down TAGGCGCTTGCTATTTTCTTTTTCGAGAATGACAGGCGCTTTTCTTATTTTCAGGAGGATTTATT GAAAAAACAGGATATGGAACTTTAATAGGCGCTTGCTATTTTCTTTTTCGAGAATGACAGGCGCTTTTCTTATTTTCAGGAGGATTTATTTGAATGTATTTAAAGCTGTCAAGCA TAGGCGCTTGCTATTTTCTTTTTCGAGAATGACAGGCGC 39 TTerm_0230 NZ_LR027880.1 1579178 1579191 14 1579200 1579213 14 8 92 0 23 53 46 53 46 0 1579195 AACGGCGGTTTTGA TCAAAACCGTCGTT True GCCATTTTA TTCTTTTGA False True + AACGGCGGTTTTGA AATAACAA TCAAAACCGTCGTT TTCTTTTGA 54 RIL182_RS07375 intergenic 1579108 1579565 + down AAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCA ATCTTGCGAATTTACGATAAGGTAAAAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCATGACACCTAATCGCAGGGAATTTGA AAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTT 105 TTerm_0231 NZ_LR027880.1 1579263 1579275 13 1579285 1579297 13 9 76 0 11 42 57 40 60 0 1579279 GGACACGACGGTA TATCGCCATGTCC True CTATTTGGG TTTTTTCTA False True + GGACACGACGGTA TCAAGGAGG TATCGCCATGTCC TTTTTTCTA 46 RIL182_RS07375 intergenic 1579108 1579565 + down AAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCA ATCTTGCGAATTTACGATAAGGTAAAAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCATGACACCTAATCGCAGGGAATTTGA AAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCC 189 TTerm_0232 NZ_LR027880.1 1583403 1583422 20 1583429 1583448 20 6 85 0 25 67 32 70 29 0 1583425 ACGCATATGGTTTTCTAAAT ATTTGGAAGACTATATGCGT True ATACCGGGA TTTTGTGAA False True + ACGCATATGGTTTTCTAAAT GAACGG ATTTGGAAGACTATATGCGT TTTTGTGAA 66 RIL182_RS07400 intergenic 1583378 1583443 + down AAAATAGTCTAAAAATATACCGGGACGCATATGGTTTTCTAAATGAACGGATTTGGAAGACTATA AATCTTATTCCGCTTTAATGTATAAAAAATAGTCTAAAAATATACCGGGACGCATATGGTTTTCTAAATGAACGGATTTGGAAGACTATATGCGTTTTTGTGAATTTCAGAAAAA AAAATAGTCTAAAAATATACCGGGACGCATATGGTTTTCTAAATGAACGGATTTGGAAGACTATATGCGT 70 TTerm_0233 NZ_LR027880.1 1612816 1612840 25 1612848 1612872 25 7 80 0 25 74 26 85 15 0 1612843 GAAAAGAACTGTGCAAAAGAAATAT ATATCTGTTTTGCAGAATTTTTTTC True TTTATTAAG AGGGAAAAG True True + GAAAAGAACTGTGCAAAAGAAATAT TTGACCG ATATCTGTTTTGCAGAATTTTTTTC AGGGAAAAG 58 RIL182_RS07515 intergenic 1612729 1612893 + down TGAACTGGTATGATCTGGATGTCAAAAGGTATTCCGTGTTTGGCATAACCTTTTGACATCCGGAGCAGAATCAAAGTATTTATTAAGAAAAGAACTGTGCAAAAGAAATATTTGACCGATATCTGTTTTGCAGAATTTTTTTCAGGGAAAAGGGGCGAAGAACA GATTGATACGTTGAAGATCCAGTAGTGAACTGGTATGATCTGGATGTCAAAAGGTATTCCGTGTTTGGCATAACCTTTTGACATCCGGAGCAGAATCAAAGTATTTATTAAGAAAAGAACTGTGCAAAAGAAATATTTGACCGATATCTGTTTTGCAGAATTTTTTTCAGGGAAAAGGGGCGAAGAACATGAACAGTATGTTTGGACCGGAGAC TGAACTGGTATGATCTGGATGTCAAAAGGTATTCCGTGTTTGGCATAACCTTTTGACATCCGGAGCAGAATCAAAGTATTTATTAAGAAAAGAACTGTGCAAAAGAAATATTTGACCGATATCTGTTTTGCAGAATTTTTTTC 143 TTerm_0234 NZ_LR027880.1 1615805 1615816 12 1615826 1615837 12 9 83 0 14 75 25 80 20 0 1615820 AAGCAAGTTGTT AACAAATTGTTT True AAAACTTGA TGAAATGAG True True + AAGCAAGTTGTT CCCTGGCAA AACAAATTGTTT TGAAATGAG 36 RIL182_RS07530 intergenic 1615798 1615854 + down AACTTGAAGCAAGTTGTTCCCTGGCAAAACAAATTGTTTTGAAATGAGGATTATTA TGATACGGAGATTGGAAGAAGATAAAACTTGAAGCAAGTTGTTCCCTGGCAAAACAAATTGTTTTGAAATGAGGATTATTATGAAGTTAAATAAGTTGGGAAAGTT AACTTGAAGCAAGTTGTTCCCTGGCAAAACAAATTGTTT 39 TTerm_0235 NZ_LR027880.1 1617352 1617368 17 1617376 1617392 17 7 88 0 24 47 52 46 53 0 1617371 CTGGATAAGAAGCCGGG CCCGGTTTCTTATTCAG True ATTATGAGC TTTTTTTAT False True + CTGGATAAGAAGCCGGG TGGAAAT CCCGGTTTCTTATTCAG TTTTTTTAT 88 RIL182_RS07535 intergenic 1617221 1617412 + down CAGATTCCATGTCATGAATTCATGGGTTTATAATGGTTTTGTAATAAAGTCAGAACTCTTGACAGAAACCATAAGATTTTATAGAATAATGTGGTCATCGGAGGGTTTATAATACTTACGATATTATGAGCTGGATAAGAAGCCGGGTGGAAATCCCGGTTTCTTATTCAGTTTTTTTATGGAGAGTTTTA TGCACTGATGAAATATGCAGAATAACAGATTCCATGTCATGAATTCATGGGTTTATAATGGTTTTGTAATAAAGTCAGAACTCTTGACAGAAACCATAAGATTTTATAGAATAATGTGGTCATCGGAGGGTTTATAATACTTACGATATTATGAGCTGGATAAGAAGCCGGGTGGAAATCCCGGTTTCTTATTCAGTTTTTTTATGGAGAGTTTTATGGAACACGATTTTACAAGCGGAAG CAGATTCCATGTCATGAATTCATGGGTTTATAATGGTTTTGTAATAAAGTCAGAACTCTTGACAGAAACCATAAGATTTTATAGAATAATGTGGTCATCGGAGGGTTTATAATACTTACGATATTATGAGCTGGATAAGAAGCCGGGTGGAAATCCCGGTTTCTTATTCAG 171 TTerm_0236 NZ_LR027880.1 1658937 1658945 9 1658950 1658958 9 4 88 0 13 50 50 50 50 0 1658947 AAAAGGGCG CGTCCTTTT True AATTCATGA TTTGTGCTC True True + AAAAGGGCG GTTT CGTCCTTTT TTTGTGCTC 58 RIL182_RS07705 intergenic 1658937 1659072 + down AAAGGGCGGTTTCGTCCTTTTTTTGTGCTCAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAGAGCGTATAAAATATGTGAAGAATAGTGCCGATGAAATTATAAAAGAA AGCAGATTTGTTTCTGAATTCATGAAAAGGGCGGTTTCGTCCTTTTTTTGTGCTCAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAGAGCGTATAAAATATGTGAAGAATAGTGCCGATGAAATTATAAAAGAATGGAACATGATATAAGTCATATTAA AAAGGGCGGTTTCGTCCTTTT 21 TTerm_0237 NZ_LR027880.1 1667979 1667992 14 1667997 1668010 14 4 85 0 18 50 50 50 50 0 1667994 AGGGCAGTGAACCA TGGTTTACTGCTCT True TAAAAGACA TTTCACAAC True True + AGGGCAGTGAACCA ATAA TGGTTTACTGCTCT TTTCACAAC 52 RIL182_RS07765 intergenic 1667764 1668111 + down ATTGTTGATTGCGTTTTAGTAAATAGTAGATAAAAAACGGAAAGATATTCATCGCTGGTAGCGGCATTGAGTTCATAAATTACTACTACTCTAGATAAAAGTAGTATTCCGATAAGTTAAAAGATAAAGCAGATGCAAATAGACACGAATCCCAGCGTATACCAATGAAGGAGTTTATTTCATTTCTTTAATAGTGCAGACATGACTAAAAGACAGGGCAGTGAACCAATAATGGTTTACTGCTCTTTTCACAACAAAAAAAGGTCATTTCACAACAACTGTGGCAGATATAATCTGTTCGTCCGATATAATAAATATATTTATCAGACAAAAAGGAAGTGGCAAAA AAATACTATTGATTTGCAGATTTAGATTGTTGATTGCGTTTTAGTAAATAGTAGATAAAAAACGGAAAGATATTCATCGCTGGTAGCGGCATTGAGTTCATAAATTACTACTACTCTAGATAAAAGTAGTATTCCGATAAGTTAAAAGATAAAGCAGATGCAAATAGACACGAATCCCAGCGTATACCAATGAAGGAGTTTATTTCATTTCTTTAATAGTGCAGACATGACTAAAAGACAGGGCAGTGAACCAATAATGGTTTACTGCTCTTTTCACAACAAAAAAAGGTCATTTCACAACAACTGTGGCAGATATAATCTGTTCGTCCGATATAATAAATATATTTATCAGACAAAAAGGAAGTGGCAAAATGCAAATAGCTATCTGTGATGATGA ATTGTTGATTGCGTTTTAGTAAATAGTAGATAAAAAACGGAAAGATATTCATCGCTGGTAGCGGCATTGAGTTCATAAATTACTACTACTCTAGATAAAAGTAGTATTCCGATAAGTTAAAAGATAAAGCAGATGCAAATAGACACGAATCCCAGCGTATACCAATGAAGGAGTTTATTTCATTTCTTTAATAGTGCAGACATGACTAAAAGACAGGGCAGTGAACCAATAATGGTTTACTGCTCT 246 TTerm_0238 NZ_LR027880.1 1688709 1688725 17 1688734 1688750 17 8 82 0 19 73 26 78 21 0 1688729 AAAGAAACTCTGACTTT AAAGTCAGGTTTTTTTT True ACTATTGAA ATGGGATTT True True + AAAGAAACTCTGACTTT GCTATGAT AAAGTCAGGTTTTTTTT ATGGGATTT 54 RIL182_RS07850 intergenic 1688694 1688784 + down ATGATGACTATTGAAAAGAAACTCTGACTTTGCTATGATAAAGTCAGGTTTTTTTTATGGGATTTTTTGGGGGGCGGATAGGTGAGAATA AGACCTTTTTTTTGCAGAAGGTTAAATGATGACTATTGAAAAGAAACTCTGACTTTGCTATGATAAAGTCAGGTTTTTTTTATGGGATTTTTTGGGGGGCGGATAGGTGAGAATATGTCTGAAAAGAGCAAGGTATTAGT ATGATGACTATTGAAAAGAAACTCTGACTTTGCTATGATAAAGTCAGGTTTTTTTT 56 TTerm_0239 NZ_LR027880.1 1693481 1693491 11 1693499 1693509 11 7 81 0 12 77 22 77 22 0 1693494 GCTATTTGTTT AAATATATAGC True TTAGTACGG TTTTATGAA False True + GCTATTTGTTT CCGGGCA AAATATATAGC TTTTATGAA 24 RIL182_RS07875 intergenic 1693476 1693546 + down TACGGCTATTTGTTTCCGGGCAAAATATATAGCTTTTATGAAAAAAATAATATCATTAGCTGCTTAGAAA TTCGGATATTTATGTGAGGGATTAGTACGGCTATTTGTTTCCGGGCAAAATATATAGCTTTTATGAAAAAAATAATATCATTAGCTGCTTAGAAATGGAGATTAATGTGAAAAAACAGGA TACGGCTATTTGTTTCCGGGCAAAATATATAGC 33 TTerm_0240 NZ_LR027880.1 1702318 1702326 9 1702335 1702343 9 8 88 0 13 27 72 25 75 0 1702330 AGGCTCTGC GCGGAGCCT True AATGTCGGA TTTTTTAGT False True + AGGCTCTGC TATTGTTG GCGGAGCCT TTTTTTAGT 66 RIL182_RS07930 intergenic 1702241 1702604 + down GATAGAAATCAAAAATTTTGGATTATCATTTACCACGATCCGGCTGGATACCGTGGGTTTTTAAAGAAAATGTCGGAGGCTCTGCTATTGTTGGCGGAGCCTTTTTTTAGTTTGCGCGCCATGGGCGCACTCTAACGGGTGCAAGTCCCGAACACGCCCAGATAGTGGGAAGTGTATAGCTGAACAGCAAATATCGGAGATTTAAGGCAGAAGAATTATCGGAAACTGACATTGCATGGATCTTTGATCAGGAGTATTTTGAGCATCCGCAGTGTCTGAAAATGTATAAATGGAAGCGGGGATCAAAATAAATTCCTGAAACTCAAACTACAGATATAATGAAAAATATGGAGGCAAGTGAAA AATGAAGGAAAGTTTAGAAGAGTAAGATAGAAATCAAAAATTTTGGATTATCATTTACCACGATCCGGCTGGATACCGTGGGTTTTTAAAGAAAATGTCGGAGGCTCTGCTATTGTTGGCGGAGCCTTTTTTTAGTTTGCGCGCCATGGGCGCACTCTAACGGGTGCAAGTCCCGAACACGCCCAGATAGTGGGAAGTGTATAGCTGAACAGCAAATATCGGAGATTTAAGGCAGAAGAATTATCGGAAACTGACATTGCATGGATCTTTGATCAGGAGTATTTTGAGCATCCGCAGTGTCTGAAAATGTATAAATGGAAGCGGGGATCAAAATAAATTCCTGAAACTCAAACTACAGATATAATGAAAAATATGGAGGCAAGTGAAATGAATATTCGAAGAGCAAACGAAAA GATAGAAATCAAAAATTTTGGATTATCATTTACCACGATCCGGCTGGATACCGTGGGTTTTTAAAGAAAATGTCGGAGGCTCTGCTATTGTTGGCGGAGCCT 102 TTerm_0241 NZ_LR027880.1 1725324 1725330 7 1725338 1725344 7 7 100 0 14 71 28 71 28 0 1725333 ATGCTAT ATAGCAT True AGAGGCAAA GCATTTTGC False True + ATGCTAT AAAAAAC ATAGCAT GCATTTTGC 44 RIL182_RS08055 intergenic 1725258 1725377 + down CTTTAAATAAAAATAGGGAGGAAAATCATACACAGCATGCTGGGCATTGCTCCTGCAAGAGGCAAATGCTATAAAAAACATAGCATGCATTTTGCTCCGCAAAACAGGGAGGATTATCA TACATTTAAGAAAGAATTAAATTAACTTTAAATAAAAATAGGGAGGAAAATCATACACAGCATGCTGGGCATTGCTCCTGCAAGAGGCAAATGCTATAAAAAACATAGCATGCATTTTGCTCCGCAAAACAGGGAGGATTATCATGAAAGAATACATAGCAAAAGCAGT CTTTAAATAAAAATAGGGAGGAAAATCATACACAGCATGCTGGGCATTGCTCCTGCAAGAGGCAAATGCTATAAAAAACATAGCAT 86 TTerm_0242 NZ_LR027880.1 1755908 1755928 21 1755933 1755953 21 4 85 0 27 61 38 61 38 0 1755930 AAAAGGACAGAAGTTGGAATC GAATCCAGTTTCTGTCCTTTT True TGCATAGGA AAAATTTTT True True + AAAAGGACAGAAGTTGGAATC CGAA GAATCCAGTTTCTGTCCTTTT AAAATTTTT 78 RIL182_RS08195 intergenic 1755818 1756006 + down ACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTTAAAATTTTTAGTAATCAGATATTATTTTTTGTGTTCTTGTTTTTCTTTGAGCC AGATGAGCTGGTATATTTCTCGTAAACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTTAAAATTTTTAGTAATCAGATATTATTTTTTGTGTTCTTGTTTTTCTTTGAGCCTATTCTTCCTTGATTCCATGTTCAC ACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTT 135 TTerm_0243 NZ_LR027880.1 1755908 1755928 21 1755933 1755953 21 4 85 0 27 61 38 61 38 0 1755930 AAAAGGACAGAAGTTGGAATC GAATCCAGTTTCTGTCCTTTT True TGCATAGGA AAAATTTTT True True + AAAAGGACAGAAGTTGGAATC CGAA GAATCCAGTTTCTGTCCTTTT AAAATTTTT 78 RIL182_RS08200 intergenic 1755818 1756006 - down GGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTTTCCTATGCATCTATTTGTTACTGTTCACATCTCCAAGTGTGACCAGCAGCGATTATTCTTCCCAGCTTACACATGCAGAACATATCCGGT GTGAACATGGAATCAAGGAAGAATAGGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTTTCCTATGCATCTATTTGTTACTGTTCACATCTCCAAGTGTGACCAGCAGCGATTATTCTTCCCAGCTTACACATGCAGAACATATCCGGTTTACGAGAAATATACCAGCTCATCT ACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTT 135 TTerm_0244 NZ_LR027880.1 1780539 1780559 21 1780567 1780587 21 7 90 0 32 61 38 63 36 0 1780562 AATCGCCTGAAATCTGAATTA TAATTCGGATCTCAGGCGATT True GATAAAGCA TTTACCTAT False True + AATCGCCTGAAATCTGAATTA CAAGAGA TAATTCGGATCTCAGGCGATT TTTACCTAT 72 RIL182_RS08305 intergenic 1780497 1780639 + down TAGAAAAATAAAAGAGAACAGAGAGAAAAGCCAGATAAAGCAATCGCCTGAAATCTGAATTACAAGAGATAATTCGGATCTCAGGCGATTTTTACCTATAGAAATTAAAAGTCCTTTGCAGACAGAAAAATTTCACGCTGTT AAAGATTCCAGAGCTGGAAGCGTAATAGAAAAATAAAAGAGAACAGAGAGAAAAGCCAGATAAAGCAATCGCCTGAAATCTGAATTACAAGAGATAATTCGGATCTCAGGCGATTTTTACCTATAGAAATTAAAAGTCCTTTGCAGACAGAAAAATTTCACGCTGTTTAGGCTGGAGAATTGCTGTGCTGCC TAGAAAAATAAAAGAGAACAGAGAGAAAAGCCAGATAAAGCAATCGCCTGAAATCTGAATTACAAGAGATAATTCGGATCTCAGGCGATT 90 TTerm_0245 NZ_LR027880.1 1780539 1780559 21 1780567 1780587 21 7 90 0 32 61 38 63 36 0 1780562 AATCGCCTGAAATCTGAATTA TAATTCGGATCTCAGGCGATT True GATAAAGCA TTTACCTAT False True + AATCGCCTGAAATCTGAATTA CAAGAGA TAATTCGGATCTCAGGCGATT TTTACCTAT 72 RIL182_RS08310 intergenic 1780497 1780639 - down AACAGCGTGAAATTTTTCTGTCTGCAAAGGACTTTTAATTTCTATAGGTAAAAATCGCCTGAGATCCGAATTATCTCTTGTAATTCAGATTTCAGGCGATTGCTTTATCTGGCTTTTCTCTCTGTTCTCTTTTATTTTTCTA GGCAGCACAGCAATTCTCCAGCCTAAACAGCGTGAAATTTTTCTGTCTGCAAAGGACTTTTAATTTCTATAGGTAAAAATCGCCTGAGATCCGAATTATCTCTTGTAATTCAGATTTCAGGCGATTGCTTTATCTGGCTTTTCTCTCTGTTCTCTTTTATTTTTCTATTACGCTTCCAGCTCTGGAATCTTT TAGAAAAATAAAAGAGAACAGAGAGAAAAGCCAGATAAAGCAATCGCCTGAAATCTGAATTACAAGAGATAATTCGGATCTCAGGCGATT 90 TTerm_0246 NZ_LR027880.1 1784408 1784430 23 1784440 1784462 23 9 69 0 11 73 26 81 18 0 1784434 ATATCATTTACCGTAGCAAATAG CTATCCGATATGATAAAAAATAT True AAGAGACGA TATTTTTGA False True + ATATCATTTACCGTAGCAAATAG GAAAAAGGA CTATCCGATATGATAAAAAATAT TATTTTTGA 46 RIL182_RS08320 intergenic 1784430 1784449 + down GAAAAAGGACTATCCGATA CGATATCATTTACCGTAGCAAATAGGAAAAAGGACTATCCGATATGATAAAAAATATTATTTTTGACGT GAAAAAGGACTATCCGATATGATAAAAAATAT 32 TTerm_0247 NZ_LR027880.1 1785100 1785116 17 1785121 1785137 17 4 82 0 19 55 44 57 42 0 1785118 ATAAGAGCAGCTTTCAC GTGGAGGCTGCTTTTAT True GATACAGGA TTATGATAA False True + ATAAGAGCAGCTTTCAC GGAT GTGGAGGCTGCTTTTAT TTATGATAA 70 RIL182_RS08325 intergenic 1785051 1785360 + down GAAATGGTACATGACTGCATAAAATCGTATCACAGGAAGAGATACAGGATAAGAGCAGCTTTCACGGATGTGGAGGCTGCTTTTATTTATGATAATAGAATGCTCGCAGAGTGTGCATTCTATTATTCATGACAATAGAATGCTCGCAGGGTGTGCATTCTATTGTATATGTTCACACTTTTATCACAGATTCATCCTCCTTTAAACACAATTACACGTTACTCTTATAAAGTAATAATTTGGTTACTGGTCACACGATAAGTGCGGATAGTGGCATATATTGAGAATGAAATAAGGAGGAGAGAAACG ATTAAAAACATATGGTGTTATGTAGGAAATGGTACATGACTGCATAAAATCGTATCACAGGAAGAGATACAGGATAAGAGCAGCTTTCACGGATGTGGAGGCTGCTTTTATTTATGATAATAGAATGCTCGCAGAGTGTGCATTCTATTATTCATGACAATAGAATGCTCGCAGGGTGTGCATTCTATTGTATATGTTCACACTTTTATCACAGATTCATCCTCCTTTAAACACAATTACACGTTACTCTTATAAAGTAATAATTTGGTTACTGGTCACACGATAAGTGCGGATAGTGGCATATATTGAGAATGAAATAAGGAGGAGAGAAACGTGATTGAGATCAATCATCTGGTAAA GAAATGGTACATGACTGCATAAAATCGTATCACAGGAAGAGATACAGGATAAGAGCAGCTTTCACGGATGTGGAGGCTGCTTTTAT 86 TTerm_0248 NZ_LR027880.1 1789103 1789116 14 1789125 1789138 14 8 92 0 23 60 39 61 38 0 1789120 AAAATACCGGATTG CAGTCCGGTATTTT True CAGAGATGA AAGTTCATA True True + AAAATACCGGATTG TATATGTG CAGTCCGGTATTTT AAGTTCATA 78 RIL182_RS08340 intergenic 1789068 1789279 + down GAGAGTGAAATGACAAATCTGAATCACAGAGATGAAAATACCGGATTGTATATGTGCAGTCCGGTATTTTAAGTTCATAAATTTTTAATTTGACACTTTTGGAAAAAAGAGGTAACATGAATGTGAGAAAGTTCATTAACGAACTAATTCGAACCGCAAAGCAGGAAATAAAAAGTTATTTACCGGAAGAAAAAAGAATGTGGAGCAGGGA AACAGAGGAAACGGAAACGAAGTAAGAGAGTGAAATGACAAATCTGAATCACAGAGATGAAAATACCGGATTGTATATGTGCAGTCCGGTATTTTAAGTTCATAAATTTTTAATTTGACACTTTTGGAAAAAAGAGGTAACATGAATGTGAGAAAGTTCATTAACGAACTAATTCGAACCGCAAAGCAGGAAATAAAAAGTTATTTACCGGAAGAAAAAAGAATGTGGAGCAGGGATGATGTACAGTGAGTATGAAATATT GAGAGTGAAATGACAAATCTGAATCACAGAGATGAAAATACCGGATTGTATATGTGCAGTCCGGTATTTT 70 TTerm_0249 NZ_LR027880.1 1792393 1792410 18 1792417 1792434 18 6 88 0 26 61 38 62 37 0 1792413 AAAATCCCGGTGTTTTGA TCAGAACACAGGGATTTT True AGTAAAACA TATGTATCT True True + AAAATCCCGGTGTTTTGA ATGATA TCAGAACACAGGGATTTT TATGTATCT 68 RIL182_RS08360 intergenic 1792385 1792463 + down GTAAAACAAAATCCCGGTGTTTTGAATGATATCAGAACACAGGGATTTTTATGTATCTGAAAGGAGAAATTATCATTA TAAATACTGCTGCATGAATAAATAAGTAAAACAAAATCCCGGTGTTTTGAATGATATCAGAACACAGGGATTTTTATGTATCTGAAAGGAGAAATTATCATTATGAAAAAAATAAAAGAATTTTTTGC GTAAAACAAAATCCCGGTGTTTTGAATGATATCAGAACACAGGGATTTT 49 TTerm_0250 NZ_LR027880.1 1793205 1793218 14 1793226 1793239 14 7 92 0 23 60 39 61 38 0 1793221 AAAACCGGAGATTT AAGTCTCCGGTTTT True AGGACGGTA TCTTATAGC True True + AAAACCGGAGATTT TGTATAG AAGTCTCCGGTTTT TCTTATAGC 62 RIL182_RS08370 intergenic 1793172 1793403 + down GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAA ATGCGCAAGTTTCTGCTGCGGCTAAGAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAATGAGAAAAAAATCTCATATTTCGCT GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTT 67 TTerm_0251 NZ_LR027880.1 1793284 1793294 11 1793302 1793312 11 7 81 0 12 77 22 77 22 0 1793297 AAAATTCAGGT ACTTGTATTTT True GCACAGAAA GGTTAGATG True True + AAAATTCAGGT AATCTTA ACTTGTATTTT GGTTAGATG 40 RIL182_RS08370 intergenic 1793172 1793403 + down GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAA ATGCGCAAGTTTCTGCTGCGGCTAAGAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAATGAGAAAAAAATCTCATATTTCGCT GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTT 140 TTerm_0252 NZ_LR027880.1 1794370 1794383 14 1794388 1794401 14 4 85 0 18 57 42 58 41 0 1794385 AAGAACGATAGGAC GTACTACCGTTCTT True ATTATTTTA TTTTTGTGC False True + AAGAACGATAGGAC AAAG GTACTACCGTTCTT TTTTTGTGC 52 RIL182_RS08380 intergenic 1794339 1794489 + down CAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGA AAAACAGCAGGTACAGATGAGCTGACAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGATGTATATAAATGTGGAGGAAAGTGG CAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTT 62 TTerm_0253 NZ_LR027880.1 1794446 1794454 9 1794461 1794469 9 6 100 0 18 77 22 77 22 0 1794457 AAAATCAAG CTTGATTTT True GCCGTTGGA TTCTTAAGA True True + AAAATCAAG GAAATT CTTGATTTT TTCTTAAGA 52 RIL182_RS08380 intergenic 1794339 1794489 + down CAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGA AAAACAGCAGGTACAGATGAGCTGACAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGATGTATATAAATGTGGAGGAAAGTGG CAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTT 130 TTerm_0254 NZ_LR027880.1 1831317 1831324 8 1831330 1831337 8 5 87 0 11 68 31 71 28 0 1831326 AATCGTAA TTCCGATT True TTTACTGGA TTGTTTAGA False True + AATCGTAA AATGG TTCCGATT TTGTTTAGA 46 RIL182_RS08540 intergenic 1831324 1831439 + down AATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGA CGGAACCATTTTACTGGAATCGTAAAATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGATGGAGAACAGAGAAAAATATCTGAG AATGGTTCCGATT 13 TTerm_0255 NZ_LR027880.1 1831356 1831372 17 1831381 1831397 17 8 76 0 14 79 20 84 15 0 1831376 GAAAATATTTAAGAAAA TTCTCTTAAGAGTTTTC True ATAATTTCG CCGTAAGAT True True + GAAAATATTTAAGAAAA GCTGTCCG TTCTCTTAAGAGTTTTC CCGTAAGAT 44 RIL182_RS08540 intergenic 1831324 1831439 + down AATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGA CGGAACCATTTTACTGGAATCGTAAAATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGATGGAGAACAGAGAAAAATATCTGAG AATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTC 73 TTerm_0256 NZ_LR027880.1 1835018 1835039 22 1835049 1835071 23 9 78 4 14 57 42 61 38 0 1835043 GGTTATCATATGGTATGTGAGG CCTGACATATACATGTGGTAACC True TCAGATGGG TCTTTTTTC False True + GGTTATCATATGGTATGTGAGG AAGAGATTG CCTGACATATACATGTGGTAACC TCTTTTTTC 60 RIL182_RS08565 intergenic 1834996 1835133 + down GATCATATGGAGTTCAGATGGGGTTATCATATGGTATGTGAGGAAGAGATTGCCTGACATATACATGTGGTAACCTCTTTTTTCGTGGTTCATATTTGTTATAATAACTGGAAATCGGCTAGAATGGGGAAATATTA TACAGTAACTGACTGGGCGATGTAGGATCATATGGAGTTCAGATGGGGTTATCATATGGTATGTGAGGAAGAGATTGCCTGACATATACATGTGGTAACCTCTTTTTTCGTGGTTCATATTTGTTATAATAACTGGAAATCGGCTAGAATGGGGAAATATTATGTTAGACAGTCTGAAATTTTATCA GATCATATGGAGTTCAGATGGGGTTATCATATGGTATGTGAGGAAGAGATTGCCTGACATATACATGTGGTAACC 75 TTerm_0257 NZ_LR027880.1 1842038 1842056 19 1842063 1842081 19 6 94 0 33 65 34 66 33 0 1842059 AAAAAAAGAACCGTAAGCC GGCTTATGGTTCTTTTTTT True TAAGATTGA TCGAAAATA True True + AAAAAAAGAACCGTAAGCC GGATTT GGCTTATGGTTCTTTTTTT TCGAAAATA 90 RIL182_RS08595 intergenic 1842032 1842213 + down GATTGAAAAAAAGAACCGTAAGCCGGATTTGGCTTATGGTTCTTTTTTTTCGAAAATACATTGTTGATATTGTATAAAATAGACAAAAAAATGAAAAAACGTATTGAATTTTAAGTGATAAGTACTATAATAAGGGTAAGCAATAAGAAACTAGCATTTATACATATGGGAGGTGTTATTA GATTAATACATCTACAAGATACTAAGATTGAAAAAAAGAACCGTAAGCCGGATTTGGCTTATGGTTCTTTTTTTTCGAAAATACATTGTTGATATTGTATAAAATAGACAAAAAAATGAAAAAACGTATTGAATTTTAAGTGATAAGTACTATAATAAGGGTAAGCAATAAGAAACTAGCATTTATACATATGGGAGGTGTTATTATGATTAGTTTTTTTATTTGCCTGGC GATTGAAAAAAAGAACCGTAAGCCGGATTTGGCTTATGGTTCTTTTTTT 49 TTerm_0258 NZ_LR027880.1 1844729 1844754 26 1844759 1844784 26 4 81 7 15 55 44 59 40 0 1844756 AAAATACCGGCGGCGAAACGTTAAGA TCTTACGTTTGGCAGGTCGGTATTTT True AATAAAAGA TATGCATAA True True + AAAATACCGGCGGCGAAACGTTAAGA AAAG TCTTACGTTTGGCAGGTCGGTATTTT TATGCATAA 46 RIL182_RS08605 intergenic 1844718 1844842 + down AAAATAAAAGAAAATACCGGCGGCGAAACGTTAAGAAAAGTCTTACGTTTGGCAGGTCGGTATTTTTATGCATAAAAATAAGCCTGTCTCATAGAATGAATTAAAAGAAAAGGGAGGAGGCATA GTTCCTTGTAATGGATTACAGATAAAAAATAAAAGAAAATACCGGCGGCGAAACGTTAAGAAAAGTCTTACGTTTGGCAGGTCGGTATTTTTATGCATAAAAATAAGCCTGTCTCATAGAATGAATTAAAAGAAAAGGGAGGAGGCATATGGAAAACCTAAAAGTTTTGTTTCC AAAATAAAAGAAAATACCGGCGGCGAAACGTTAAGAAAAGTCTTACGTTTGGCAGGTCGGTATTTT 66 TTerm_0259 NZ_LR027880.1 1853173 1853180 8 1853186 1853193 8 5 87 0 11 81 18 85 14 0 1853182 AATAGGAT ATACTATT True ATTTTTAAA GCATTTTTC True True + AATAGGAT ATGAA ATACTATT GCATTTTTC 30 RIL182_RS08660 intergenic 1853130 1853347 + down CAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACA CAAAAAAGTAAAGATAACAAAATAACAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACATGAAGAGAGTATTTTTGATCGTACT CAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATT 63 TTerm_0260 NZ_LR027880.1 1853265 1853270 6 1853278 1853283 6 7 100 0 12 33 66 33 66 0 1853273 GCTGAG CTCAGC True GGGACCAGG TTTTTTCTT False True + GCTGAG ACATGTG CTCAGC TTTTTTCTT 56 RIL182_RS08660 intergenic 1853130 1853347 + down CAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACA CAAAAAAGTAAAGATAACAAAATAACAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACATGAAGAGAGTATTTTTGATCGTACT CAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGC 153 TTerm_0261 NZ_LR027880.1 1862626 1862642 17 1862647 1862663 17 4 100 0 34 64 35 64 35 0 1862644 AAAAATAAGCTGCACAC GTGTGCAGCTTATTTTT True GATGGCATA TTCTGGATG True True + AAAAATAAGCTGCACAC AGAG GTGTGCAGCTTATTTTT TTCTGGATG 100 RIL182_RS08710 intergenic 1862627 1862656 + down AAATAAGCTGCACACAGAGGTGTGCAGCT AAATGGTATCCGTATGATGGCATAAAAATAAGCTGCACACAGAGGTGTGCAGCTTATTTTTTTCTGGATGTACGATAAT AAATAAGCTGCACACAGAGGTGTGCAGCTTATTTTT 36 TTerm_0262 NZ_LR027880.1 1862626 1862642 17 1862647 1862663 17 4 100 0 34 64 35 64 35 0 1862644 AAAAATAAGCTGCACAC GTGTGCAGCTTATTTTT True GATGGCATA TTCTGGATG True True + AAAAATAAGCTGCACAC AGAG GTGTGCAGCTTATTTTT TTCTGGATG 100 RIL182_RS21965 intergenic 1862627 1862656 - down AGCTGCACACCTCTGTGTGCAGCTTATTT ATTATCGTACATCCAGAAAAAAATAAGCTGCACACCTCTGTGTGCAGCTTATTTTTATGCCATCATACGGATACCATTT AAATAAGCTGCACACAGAGGTGTGCAGCTTATTTTT 36 TTerm_0263 NZ_LR027880.1 1865321 1865333 13 1865343 1865355 13 9 100 0 26 69 30 69 30 0 1865337 AAAAAAGGAACTC GAGTTCCTTTTTT True TGAATAATA CATTATGAG True True + AAAAAAGGAACTC ACAGAAATG GAGTTCCTTTTTT CATTATGAG 76 RIL182_RS08725 intergenic 1865267 1865398 + down TAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTTCATTATGAGATTTCAAGAAGCTGCCGGTACAGGTAAAAAATCT TCTGAAAGCACATCCGAGAGGATAGTAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTTCATTATGAGATTTCAAGAAGCTGCCGGTACAGGTAAAAAATCTTAACGGCACATATCTGCAATCGTAT TAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTT 88 TTerm_0264 NZ_LR027880.1 1865321 1865333 13 1865343 1865355 13 9 100 0 26 69 30 69 30 0 1865337 AAAAAAGGAACTC GAGTTCCTTTTTT True TGAATAATA CATTATGAG True True + AAAAAAGGAACTC ACAGAAATG GAGTTCCTTTTTT CATTATGAG 76 RIL182_RS08730 intergenic 1865267 1865398 - down AGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTTTATTATTCATGACAATAGAGTGTTTGCAGAACATGCATTCTATTGTTTCTACTA ATACGATTGCAGATATGTGCCGTTAAGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTTTATTATTCATGACAATAGAGTGTTTGCAGAACATGCATTCTATTGTTTCTACTACTATCCTCTCGGATGTGCTTTCAGA TAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTT 88 TTerm_0265 NZ_LR027880.1 1872165 1872172 8 1872181 1872188 8 8 87 0 11 31 68 28 71 0 1872176 GGATGTCG CGGCATCC True AGGATATGG TTTTTTCGT False True + GGATGTCG TCGTTTGG CGGCATCC TTTTTTCGT 54 RIL182_RS08750 intergenic 1872155 1872331 + down GAGGATATGGGATGTCGTCGTTTGGCGGCATCCTTTTTTCGTGTAGATTTTGCCGGGTATGGAATTCATTTTCGTTCCGGATACATAAAAGAAAAATAGCTGCATAAATTTTCCGGCAAACAGGAAACACTATGAGAAAAAGCCACATTCATGCGGCAGAAAGCAGGAAAATCATA ACAGTTTGAGGATGTTGTTGCGTAAGAGGATATGGGATGTCGTCGTTTGGCGGCATCCTTTTTTCGTGTAGATTTTGCCGGGTATGGAATTCATTTTCGTTCCGGATACATAAAAGAAAAATAGCTGCATAAATTTTCCGGCAAACAGGAAACACTATGAGAAAAAGCCACATTCATGCGGCAGAAAGCAGGAAAATCATATGGACAAAATGAATATCAGAAAAGC GAGGATATGGGATGTCGTCGTTTGGCGGCATCC 33 TTerm_0266 NZ_LR027880.1 1874761 1874769 9 1874774 1874782 9 4 88 0 13 77 22 75 25 0 1874771 ATATGTTAC GTTACATAT True GGCATGTTA TTTATGGCG False True + ATATGTTAC GCCT GTTACATAT TTTATGGCG 42 RIL182_RS08765 intergenic 1874730 1874827 + down TTTTGACAGTCAGATAGCAGGCGGCATGTTATATGTTACGCCTGTTACATATTTTATGGCGTTTTATACAACAAAAGGAAAGGGATGGAAAATACGA GCGGGTTCGATTCCCGCCGGGTGCATTTTGACAGTCAGATAGCAGGCGGCATGTTATATGTTACGCCTGTTACATATTTTATGGCGTTTTATACAACAAAAGGAAAGGGATGGAAAATACGATGGCTTCTTCAAATGTTGATGATAA TTTTGACAGTCAGATAGCAGGCGGCATGTTATATGTTACGCCTGTTACATAT 52 TTerm_0267 NZ_LR027880.1 1876226 1876235 10 1876243 1876252 10 7 100 0 20 40 60 40 60 0 1876238 GCGGAGACTT AAGTCTCCGC True TAGAAATGG TTTTGTGCA False True + GCGGAGACTT TAAAGAT AAGTCTCCGC TTTTGTGCA 56 RIL182_RS08770 intergenic 1876164 1876280 + down ATGTTCAATATACAATGGATGGCACATTTTTAGTAACAGACTTGTAGCCACAGTAGAAATGGCGGAGACTTTAAAGATAAGTCTCCGCTTTTGTGCAGAAAGAGAAAGGTGAAAAA TATTAAGACTTCCCTGTTACAGTAAATGTTCAATATACAATGGATGGCACATTTTTAGTAACAGACTTGTAGCCACAGTAGAAATGGCGGAGACTTTAAAGATAAGTCTCCGCTTTTGTGCAGAAAGAGAAAGGTGAAAAATGCAGGAGCCAGTCAGAATCAATAA ATGTTCAATATACAATGGATGGCACATTTTTAGTAACAGACTTGTAGCCACAGTAGAAATGGCGGAGACTTTAAAGATAAGTCTCCGC 88 TTerm_0268 NZ_LR027880.1 1879083 1879094 12 1879102 1879113 12 7 100 0 24 83 16 83 16 0 1879097 AGATATTTGTTT AAACAAATATCT True TGCCACACA TTTATGGCA False True + AGATATTTGTTT CTGAGCA AAACAAATATCT TTTATGGCA 56 RIL182_RS08780 intergenic 1879047 1879185 + down TGTGGCAAATAAGCTCGATAGCTTATTTGCCACACAGATATTTGTTTCTGAGCAAAACAAATATCTTTTATGGCAGACAGAAATTTGAAATTTCCGTCGCCGCTTCGCAACAAGTTGCTCAGAGAATGGAGAATGTTA AATCAGCGCAGAGAATGGAGAATAGTGTGGCAAATAAGCTCGATAGCTTATTTGCCACACAGATATTTGTTTCTGAGCAAAACAAATATCTTTTATGGCAGACAGAAATTTGAAATTTCCGTCGCCGCTTCGCAACAAGTTGCTCAGAGAATGGAGAATGTTATGCCAATTAAAACACAGAGTGATTT TGTGGCAAATAAGCTCGATAGCTTATTTGCCACACAGATATTTGTTTCTGAGCAAAACAAATATCT 66 TTerm_0269 NZ_LR027880.1 1882028 1882044 17 1882051 1882067 17 6 82 0 19 61 38 64 35 0 1882047 TAAGAAAAGAGGGTGTC GACATCCTTTTTCCTTA True TGCTATTCT TGCGTAAAA True True + TAAGAAAAGAGGGTGTC TTAAGC GACATCCTTTTTCCTTA TGCGTAAAA 62 RIL182_RS08800 intergenic 1882019 1882112 + down TGCTATTCTAAGAAAAGAGGGTGTCTTAAGCGACATCCTTTTTCCTTATGCGTAAAAGAATACAAGAAGAAAGGATGACAGAAGAAAAGAATA TGTGGACATGGGCAACAATAAATAATGCTATTCTAAGAAAAGAGGGTGTCTTAAGCGACATCCTTTTTCCTTATGCGTAAAAGAATACAAGAAGAAAGGATGACAGAAGAAAAGAATATGACCAGAAGAGAGATAAGAGAGCA TGCTATTCTAAGAAAAGAGGGTGTCTTAAGCGACATCCTTTTTCCTTA 48 TTerm_0270 NZ_LR027880.1 1890888 1890901 14 1890909 1890922 14 7 85 0 18 71 28 75 25 0 1890904 AAAAAGGGGATATC GATATCTTCTTTTT True CATATAATA TTGCGAAAG True True + AAAAAGGGGATATC GAAACAG GATATCTTCTTTTT TTGCGAAAG 52 RIL182_RS08845 intergenic 1890801 1890955 + down AAATTCCAAAAAAAGGCCGGTGTGTCAGGAAGTGGCAGGGCAGTTTGGATAAATAACAGCGTGAAAAAGAAAAAAGCACATATAATAAAAAGGGGATATCGAAACAGGATATCTTCTTTTTTTGCGAAAGATGGGGAAAACAGGAGAGAGAGAA ACTTGCCGCAAAAAAGAAAAAATAAAAATTCCAAAAAAAGGCCGGTGTGTCAGGAAGTGGCAGGGCAGTTTGGATAAATAACAGCGTGAAAAAGAAAAAAGCACATATAATAAAAAGGGGATATCGAAACAGGATATCTTCTTTTTTTGCGAAAGATGGGGAAAACAGGAGAGAGAGAATGAAAAAGATAAGTGCTTATTACAG AAATTCCAAAAAAAGGCCGGTGTGTCAGGAAGTGGCAGGGCAGTTTGGATAAATAACAGCGTGAAAAAGAAAAAAGCACATATAATAAAAAGGGGATATCGAAACAGGATATCTTCTTTTT 121 TTerm_0271 NZ_LR027880.1 1894688 1894698 11 1894705 1894715 11 6 90 0 17 86 13 90 10 0 1894701 CAAAAGTTTAT ATAAATTTTTG True TAGATTTTC GGGCTGGAG True True + CAAAAGTTTAT AGAAGA ATAAATTTTTG GGGCTGGAG 34 RIL182_RS08860 intergenic 1894641 1894735 + down TACTTTTCAGAAAAGTAAAAAAGAGTTATAATATTCTTTAGATTTTCAAAAGTTTATAGAAGAATAAATTTTTGGGGCTGGAGGGTTTATGACA TCGTCTGGAACATAAAATGTATTAATACTTTTCAGAAAAGTAAAAAAGAGTTATAATATTCTTTAGATTTTCAAAAGTTTATAGAAGAATAAATTTTTGGGGCTGGAGGGTTTATGACATGAAAAAAATATTATTTGCGGCTTC TACTTTTCAGAAAAGTAAAAAAGAGTTATAATATTCTTTAGATTTTCAAAAGTTTATAGAAGAATAAATTTTTG 74 TTerm_0272 NZ_LR027880.1 1913922 1913940 19 1913950 1913968 19 9 94 0 33 71 28 72 27 0 1913944 TCAGAAAATTGGGGTATTT AAATACCCCAATTTTTTGA True CTGTTGAGT TGTCTCATT True True + TCAGAAAATTGGGGTATTT ATTCAACAA AAATACCCCAATTTTTTGA TGTCTCATT 74 RIL182_RS08960 intergenic 1913920 1914157 + down GTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAA TTTAAAACATATGCAATTCTGTTGAGTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAATGAAAGAAACGGGCATTTCAAAAAA GTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGA 48 TTerm_0273 NZ_LR027880.1 1913944 1913952 9 1913962 1913970 9 9 88 0 13 77 22 75 25 0 1913956 CAACAAAAA TTTTTGATG True TATTTATTC TCTCATTTT False True + CAACAAAAA TACCCCAAT TTTTTGATG TCTCATTTT 34 RIL182_RS08960 intergenic 1913920 1914157 + down GTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAA TTTAAAACATATGCAATTCTGTTGAGTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAATGAAAGAAACGGGCATTTCAAAAAA GTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATG 50 TTerm_0274 NZ_LR027880.1 1939190 1939203 14 1939212 1939225 14 8 85 0 18 42 57 41 58 0 1939207 AAAGCGCCATCGGA TCCGGTGGCGTTTT True AATAACAAA ATATTGCCT True True + AAAGCGCCATCGGA TCAGGACG TCCGGTGGCGTTTT ATATTGCCT 68 RIL182_RS09070 intergenic 1939170 1939294 + down TAAAAATAGGAAATAACAAAAAGCGCCATCGGATCAGGACGTCCGGTGGCGTTTTATATTGCCTAAAAAGTTAAAAAATGATATAATTTCTCCTATGTGAAATACAAACGGGAGGGCGGAAACA ACAGGGATATATCACAAAGAAATAATAAAAATAGGAAATAACAAAAAGCGCCATCGGATCAGGACGTCCGGTGGCGTTTTATATTGCCTAAAAAGTTAAAAAATGATATAATTTCTCCTATGTGAAATACAAACGGGAGGGCGGAAACATGGTTGTAAAAACGGCTGTTTTAAA TAAAAATAGGAAATAACAAAAAGCGCCATCGGATCAGGACGTCCGGTGGCGTTTT 55 TTerm_0275 NZ_LR027880.1 1944634 1944652 19 1944661 1944680 20 8 85 5 18 58 41 58 41 0 1944656 AAGAAATCTCCGGCAGACA TGTCTGTCCGGAAATTTTTT True TATGCCATA TGCAGTGTT False True + AAGAAATCTCCGGCAGACA GAAATTCT TGTCTGTCCGGAAATTTTTT TGCAGTGTT 60 RIL182_RS09080 intergenic 1944635 1944812 + down GAAATCTCCGGCAGACAGAAATTCTTGTCTGTCCGGAAATTTTTTTGCAGTGTTCGAATATTATTTTGACAGATCTGTGAAAACGTTTTACAATAGAACCAGTATGCAAACAGAAATGCCAGGATCACACTGGATTCATATCCATGTGAGAGAGACATTCTGGGATGGAGGAAAAGA TTTTTTAGATGAATTTATGCCATAAGAAATCTCCGGCAGACAGAAATTCTTGTCTGTCCGGAAATTTTTTTGCAGTGTTCGAATATTATTTTGACAGATCTGTGAAAACGTTTTACAATAGAACCAGTATGCAAACAGAAATGCCAGGATCACACTGGATTCATATCCATGTGAGAGAGACATTCTGGGATGGAGGAAAAGATGGAAAACGCAAAAATCAGCAATTT GAAATCTCCGGCAGACAGAAATTCTTGTCTGTCCGGAAATTTTTT 45 TTerm_0276 NZ_LR027880.1 1948665 1948684 20 1948693 1948713 21 8 80 4 15 80 19 88 11 0 1948688 AATTATTTTGATTAGTGTAT ATACACGGAATAAAGATAATT True CAGAATTGA TTTTTCGAT False True + AATTATTTTGATTAGTGTAT AAAAACAA ATACACGGAATAAAGATAATT TTTTTCGAT 46 RIL182_RS09095 intergenic 1948679 1948827 + down TGTATAAAAACAAATACACGGAATAAAGATAATTTTTTTCGATTAGGACTTGTAGATTTCAACAAAATGTGCGAAAATAGGTAAGGTATGTTAAATGTATAACAAAGTCTGATACATACAGTTCTATTAAGTGAAAGGAGTCTTAAAA TTCAGAATTGAATTATTTTGATTAGTGTATAAAAACAAATACACGGAATAAAGATAATTTTTTTCGATTAGGACTTGTAGATTTCAACAAAATGTGCGAAAATAGGTAAGGTATGTTAAATGTATAACAAAGTCTGATACATACAGTTCTATTAAGTGAAAGGAGTCTTAAAATGATTTACACTAAGGAAGTCGAAAA TGTATAAAAACAAATACACGGAATAAAGATAATT 34 TTerm_0277 NZ_LR027880.1 1958616 1958624 9 1958631 1958639 9 6 88 0 13 83 16 87 12 0 1958627 AAGAATATG CATATTTTT True AAGCAGATA TATTAAGAA False True + AAGAATATG CAAATA CATATTTTT TATTAAGAA 34 RIL182_RS09140 intergenic 1958601 1958672 + down CAAAATAAGCAGATAAGAATATGCAAATACATATTTTTTATTAAGAAACCAAAATTGGAGGAAATTAATTA AGACGGCAAAAGAGTATCATTATAACAAAATAAGCAGATAAGAATATGCAAATACATATTTTTTATTAAGAAACCAAAATTGGAGGAAATTAATTATGGCAGCAAAAATATTTTATCAGGA CAAAATAAGCAGATAAGAATATGCAAATACATATTTTT 38 TTerm_0278 NZ_LR027880.1 1976756 1976764 9 1976771 1976779 9 6 88 0 13 38 61 37 62 0 1976767 TCTGCCGTG CACAGCAGA True CCAGTCAGT TACGCTTTT False True + TCTGCCGTG AGAATA CACAGCAGA TACGCTTTT 58 RIL182_RS09215 intergenic 1976715 1977015 - down AAACATTACTATATTTCGTGTATGCAGATAAAAGTGCCACCCCCCTTGTATTTACAGGGATTGTGGCACTTTTTTAACTAATCAACTGTCAAAGATGAGATTATACTCTATCATATCTGATGCAAAATATCAAAGAAAAAAAGTGAATGCTTGTAGCATATTCATTTTTATGCTACAGTGATGTTCGAATGACACCATTTTATGAAATGATGTTTCAGATAACGAACAAAAGCGTATCTGCTGTGTATTCTCACGGCAGACTGACTGGAAATGGAGAATAACTTGAAAAATAAGATTTTT TTCAGAAAAAAAGTAAGCGGAGATAAAACATTACTATATTTCGTGTATGCAGATAAAAGTGCCACCCCCCTTGTATTTACAGGGATTGTGGCACTTTTTTAACTAATCAACTGTCAAAGATGAGATTATACTCTATCATATCTGATGCAAAATATCAAAGAAAAAAAGTGAATGCTTGTAGCATATTCATTTTTATGCTACAGTGATGTTCGAATGACACCATTTTATGAAATGATGTTTCAGATAACGAACAAAAGCGTATCTGCTGTGTATTCTCACGGCAGACTGACTGGAAATGGAGAATAACTTGAAAAATAAGATTTTTATGAAACGAAACTATCGATTATTTT AAAAATCTTATTTTTCAAGTTATTCTCCATTTCCAGTCAGTCTGCCGTGAGAATACACAGCAGA 64 TTerm_0279 NZ_LR027880.1 2003151 2003162 12 2003169 2003180 12 6 83 0 14 16 83 10 90 0 2003165 CCCGGACGAGCC GGCTCGACGGGG True CGTGCATCC ATTTTTGCT False True + CCCGGACGAGCC TTCCAT GGCTCGACGGGG ATTTTTGCT 68 RIL182_RS09335 intergenic 2002988 2003571 + down AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGGATTTTTGCTGCCATCCGTGGCAGCAAAACGCTGTTTTGTGACAAGGGCACTAAGAACCTCTAATTTCCTCCCAAAGTCATCACAAAATCTGCCGGTTCCGGTGCACTGTCGGCGTGCCTTAGTGCAAACACCCTCCAAGTTTCTGATGGATTTTAGATGATATTGATTGTGGCTTCACTGCTAAAGCAGGAAGCTGTTTTTTGCTGTGTAGGATTCGGGTGTCAAAAGGTGGCTTCAAGTTTTTGATTGGCAAATTGCACAAAGTCGGGTCTGTTTTGTTCCGATGTCCGAAAATAAGAAAATCTAAGTCTGCCTGAGTTAGATTACAACGGAGTGACGTGTACGTCTTAAACGCCCCGTCCATGTGGCGTTAAGACTTTTGCCGCCTCAC AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGG 192 TTerm_0280 NZ_LR027880.1 2003151 2003162 12 2003169 2003180 12 6 83 0 14 16 83 10 90 0 2003165 CCCGGACGAGCC GGCTCGACGGGG True CGTGCATCC ATTTTTGCT False True + CCCGGACGAGCC TTCCAT GGCTCGACGGGG ATTTTTGCT 68 RIL182_RS09345 intergenic 2002988 2003571 - down GTGAGGCGGCAAAAGTCTTAACGCCACATGGACGGGGCGTTTAAGACGTACACGTCACTCCGTTGTAATCTAACTCAGGCAGACTTAGATTTTCTTATTTTCGGACATCGGAACAAAACAGACCCGACTTTGTGCAATTTGCCAATCAAAAACTTGAAGCCACCTTTTGACACCCGAATCCTACACAGCAAAAAACAGCTTCCTGCTTTAGCAGTGAAGCCACAATCAATATCATCTAAAATCCATCAGAAACTTGGAGGGTGTTTGCACTAAGGCACGCCGACAGTGCACCGGAACCGGCAGATTTTGTGATGACTTTGGGAGGAAATTAGAGGTTCTTAGTGCCCTTGTCACAAAACAGCGTTTTGCTGCCACGGATGGCAGCAAAAATCCCCGTCGAGCCATGGAAGGCTCGTCCGGGGATGCACGCGTCACTCTGCCACAACCCAGATCAAGGGCACTTAGAACCTCTTATTTCCGTACAACGGAACCCAACAAAACCTGCCGGTTCCGGCGCACGTCCCAAGGCTCAGCCACCTCCTGACTGGGTGCAGCATCAATTCACAACAAATCTCATCTGTTT AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGG 192 TTerm_0281 NZ_LR027880.1 2003183 2003193 11 2003198 2003208 11 4 100 0 22 54 45 54 45 0 2003195 TTTTGCTGCCA TGGCAGCAAAA True ACGGGGATT CGCTGTTTT False True + TTTTGCTGCCA TCCG TGGCAGCAAAA CGCTGTTTT 76 RIL182_RS09335 intergenic 2002988 2003571 + down AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGGATTTTTGCTGCCATCCGTGGCAGCAAAACGCTGTTTTGTGACAAGGGCACTAAGAACCTCTAATTTCCTCCCAAAGTCATCACAAAATCTGCCGGTTCCGGTGCACTGTCGGCGTGCCTTAGTGCAAACACCCTCCAAGTTTCTGATGGATTTTAGATGATATTGATTGTGGCTTCACTGCTAAAGCAGGAAGCTGTTTTTTGCTGTGTAGGATTCGGGTGTCAAAAGGTGGCTTCAAGTTTTTGATTGGCAAATTGCACAAAGTCGGGTCTGTTTTGTTCCGATGTCCGAAAATAAGAAAATCTAAGTCTGCCTGAGTTAGATTACAACGGAGTGACGTGTACGTCTTAAACGCCCCGTCCATGTGGCGTTAAGACTTTTGCCGCCTCAC AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGGATTTTTGCTGCCATCCGTGGCAGCAAAA 220 TTerm_0282 NZ_LR027880.1 2003183 2003193 11 2003198 2003208 11 4 100 0 22 54 45 54 45 0 2003195 TTTTGCTGCCA TGGCAGCAAAA True ACGGGGATT CGCTGTTTT False True + TTTTGCTGCCA TCCG TGGCAGCAAAA CGCTGTTTT 76 RIL182_RS09345 intergenic 2002988 2003571 - down GTGAGGCGGCAAAAGTCTTAACGCCACATGGACGGGGCGTTTAAGACGTACACGTCACTCCGTTGTAATCTAACTCAGGCAGACTTAGATTTTCTTATTTTCGGACATCGGAACAAAACAGACCCGACTTTGTGCAATTTGCCAATCAAAAACTTGAAGCCACCTTTTGACACCCGAATCCTACACAGCAAAAAACAGCTTCCTGCTTTAGCAGTGAAGCCACAATCAATATCATCTAAAATCCATCAGAAACTTGGAGGGTGTTTGCACTAAGGCACGCCGACAGTGCACCGGAACCGGCAGATTTTGTGATGACTTTGGGAGGAAATTAGAGGTTCTTAGTGCCCTTGTCACAAAACAGCGTTTTGCTGCCACGGATGGCAGCAAAAATCCCCGTCGAGCCATGGAAGGCTCGTCCGGGGATGCACGCGTCACTCTGCCACAACCCAGATCAAGGGCACTTAGAACCTCTTATTTCCGTACAACGGAACCCAACAAAACCTGCCGGTTCCGGCGCACGTCCCAAGGCTCAGCCACCTCCTGACTGGGTGCAGCATCAATTCACAACAAATCTCATCTGTTT AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGGATTTTTGCTGCCATCCGTGGCAGCAAAA 220 TTerm_0283 NZ_LR027880.1 2019811 2019829 19 2019837 2019855 19 7 94 0 33 65 34 66 33 0 2019832 AAAAATCCAAAAGACTGGA TCCGGTCTTTTGGATTTTT True GAAAAAGGA TGTTTCAGT True True + AAAAATCCAAAAGACTGGA ATGCAGA TCCGGTCTTTTGGATTTTT TGTTTCAGT 98 RIL182_RS09400 intergenic 2019802 2019931 + down GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAAT TACATGGAAGGTTAAGGTAAAATAGGAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAATTAAGCTCTTTCAACTTTGCCGGATT GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTT 53 TTerm_0284 NZ_LR027880.1 2019811 2019829 19 2019837 2019855 19 7 94 0 33 65 34 66 33 0 2019832 AAAAATCCAAAAGACTGGA TCCGGTCTTTTGGATTTTT True GAAAAAGGA TGTTTCAGT True True + AAAAATCCAAAAGACTGGA ATGCAGA TCCGGTCTTTTGGATTTTT TGTTTCAGT 98 RIL182_RS09405 intergenic 2019802 2019931 - down ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTC AATCCGGCAAAGTTGAAAGAGCTTAATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTCCTATTTTACCTTAACCTTCCATGTA GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTT 53 TTerm_0285 NZ_LR027880.1 2019881 2019896 16 2019903 2019918 16 6 87 0 22 68 31 71 28 0 2019899 AAAAAACTGCCATATC GATACGACAGTTTTTT True CAGACACAA CAGTGTTCA True True + AAAAAACTGCCATATC AAATCG GATACGACAGTTTTTT CAGTGTTCA 68 RIL182_RS09400 intergenic 2019802 2019931 + down GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAAT TACATGGAAGGTTAAGGTAAAATAGGAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAATTAAGCTCTTTCAACTTTGCCGGATT GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTT 116 TTerm_0286 NZ_LR027880.1 2019881 2019896 16 2019903 2019918 16 6 87 0 22 68 31 71 28 0 2019899 AAAAAACTGCCATATC GATACGACAGTTTTTT True CAGACACAA CAGTGTTCA True True + AAAAAACTGCCATATC AAATCG GATACGACAGTTTTTT CAGTGTTCA 68 RIL182_RS09405 intergenic 2019802 2019931 - down ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTC AATCCGGCAAAGTTGAAAGAGCTTAATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTCCTATTTTACCTTAACCTTCCATGTA GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTT 116 TTerm_0287 NZ_LR027880.1 2027331 2027351 21 2027361 2027381 21 9 95 0 37 59 40 60 40 0 2027355 GAAAAAAACGCAGTCGTGAAT ATTCACGGCTGCGTTTTTTTC True TTGTAAGCG ATGATAATG True True + GAAAAAAACGCAGTCGTGAAT CGTATAAAA ATTCACGGCTGCGTTTTTTTC ATGATAATG 90 RIL182_RS09435 intergenic 2027310 2027471 + down ATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTCATGATAATGGTTTGGTTCGCGAAGCGTGTATTCTATTGCTTACGATGATAGTGTTTTGCACGCAGGTCATGGCGTATTGGATTATTGATT ACTGCAGAAAAGGAAAGAAGCGTAAATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTCATGATAATGGTTTGGTTCGCGAAGCGTGTATTCTATTGCTTACGATGATAGTGTTTTGCACGCAGGTCATGGCGTATTGGATTATTGATTTATTCCACCAGTGTCAGACCGGAGA ATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTC 71 TTerm_0288 NZ_LR027880.1 2027331 2027351 21 2027361 2027381 21 9 95 0 37 59 40 60 40 0 2027355 GAAAAAAACGCAGTCGTGAAT ATTCACGGCTGCGTTTTTTTC True TTGTAAGCG ATGATAATG True True + GAAAAAAACGCAGTCGTGAAT CGTATAAAA ATTCACGGCTGCGTTTTTTTC ATGATAATG 90 RIL182_RS09440 intergenic 2027310 2027471 - down AATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTTCGCTTACAATGATTGAGTAAT TCTCCGGTCTGACACTGGTGGAATAAATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTTCGCTTACAATGATTGAGTAATTTACGCTTCTTTCCTTTTCTGCAGT ATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTC 71 TTerm_0289 NZ_LR027880.1 2041185 2041192 8 2041197 2041204 8 4 87 0 11 68 31 71 28 0 2041194 GAAAGTAA TTACTGTC True TAACAATCG TTTTTTTGC False True + GAAAGTAA GTTG TTACTGTC TTTTTTTGC 38 RIL182_RS09470 intergenic 2041127 2041238 + down CACATTTACCGGAAAACACGGGGCTGTAAATAACCGAATAAAAAGACAGTAACAATCGAAAGTAAGTTGTTACTGTCTTTTTTTGCTTTGTGTGAGTGGCAGTTTTTCTGT TGAATTTGTGGTAAAAGGAAGATAACACATTTACCGGAAAACACGGGGCTGTAAATAACCGAATAAAAAGACAGTAACAATCGAAAGTAAGTTGTTACTGTCTTTTTTTGCTTTGTGTGAGTGGCAGTTTTTCTGTTAAAGATAACATCGTATTTCTTTGG CACATTTACCGGAAAACACGGGGCTGTAAATAACCGAATAAAAAGACAGTAACAATCGAAAGTAAGTTGTTACTGTC 77 TTerm_0290 NZ_LR027880.1 2041185 2041192 8 2041197 2041204 8 4 87 0 11 68 31 71 28 0 2041194 GAAAGTAA TTACTGTC True TAACAATCG TTTTTTTGC False True + GAAAGTAA GTTG TTACTGTC TTTTTTTGC 38 RIL182_RS09475 intergenic 2041127 2041238 - down ACAGAAAAACTGCCACTCACACAAAGCAAAAAAAGACAGTAACAACTTACTTTCGATTGTTACTGTCTTTTTATTCGGTTATTTACAGCCCCGTGTTTTCCGGTAAATGTG CCAAAGAAATACGATGTTATCTTTAACAGAAAAACTGCCACTCACACAAAGCAAAAAAAGACAGTAACAACTTACTTTCGATTGTTACTGTCTTTTTATTCGGTTATTTACAGCCCCGTGTTTTCCGGTAAATGTGTTATCTTCCTTTTACCACAAATTCA CACATTTACCGGAAAACACGGGGCTGTAAATAACCGAATAAAAAGACAGTAACAATCGAAAGTAAGTTGTTACTGTC 77 TTerm_0291 NZ_LR027880.1 2059311 2059318 8 2059325 2059332 8 6 87 0 11 100 0 100 0 0 2059321 AAAAAATT AATTTATT True AGTGTTCGA TTTATAAAG False True + AAAAAATT TGGAAT AATTTATT TTTATAAAG 22 RIL182_RS09575 intergenic 2059259 2059352 + down ACCGATGAATGTACATTCTGTCATGTGCATGTTTTCAGACTATAGTGTTCGAAAAAATTTGGAATAATTTATTTTTATAAAGGAGTACCATCA ATGGAATGTGATCGAAAATTTATAAACCGATGAATGTACATTCTGTCATGTGCATGTTTTCAGACTATAGTGTTCGAAAAAATTTGGAATAATTTATTTTTATAAAGGAGTACCATCATGGCAACCTGGAACTCAAGAGGACT ACCGATGAATGTACATTCTGTCATGTGCATGTTTTCAGACTATAGTGTTCGAAAAAATTTGGAATAATTTATT 73 TTerm_0292 NZ_LR027880.1 2070184 2070190 7 2070198 2070204 7 7 100 0 14 71 28 71 28 0 2070193 CGTTAAA TTTAACG True TGGCAGAGC TTTTACATG False True + CGTTAAA AAAGATA TTTAACG TTTTACATG 36 RIL182_RS09630 intergenic 2070189 2070260 + down AAAAGATATTTAACGTTTTACATGAGATACTTAATGTGAAAGAAGAAAGGGTTAATGTAAGGTTGACATTA AGGGGTATGTATGGCAGAGCGTTAAAAAAGATATTTAACGTTTTACATGAGATACTTAATGTGAAAGAAGAAAGGGTTAATGTAAGGTTGACATTATGATAAAGATAAGGATTAAATTCCG AAAAGATATTTAACG 15 TTerm_0293 NZ_LR027880.1 2080809 2080826 18 2080831 2080848 18 4 88 0 26 61 38 56 43 0 2080828 AACCGATGGTTTTGACTA TAGTCTATACCATCGGTT True CATAAGAAA CTTTTGTTA True True + AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT CTTTTGTTA 68 RIL182_RS09700 intergenic 2080805 2080968 + down GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCACTTGACAAACAAATGTTCGCGTATTATGATACAGATATGCAAACAGTTGTTCGCAACAAATGTTTGCATGTGATGGAGGGTGTTTA CGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCACTTGACAAACAAATGTTCGCGTATTATGATACAGATATGCAAACAGTTGTTCGCAACAAATGTTTGCATGTGATGGAGGGTGTTTATGAGAAGCAGAAGAAAAAGCAGGAA GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTT 43 TTerm_0294 NZ_LR027880.1 2087094 2087112 19 2087120 2087138 19 7 84 0 23 65 34 68 31 0 2087115 AAAAAAATCCCCATTAAGG CCTTAACAGGGACTTTTTT True ATTTTTATA CCGGGATAT True True + AAAAAAATCCCCATTAAGG CTATACA CCTTAACAGGGACTTTTTT CCGGGATAT 62 RIL182_RS09735 intergenic 2086819 2087155 + down TATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTT AGTAAAAAAAGTAAAATGTAAATAATATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTTTATTTCTGTGCATCCATAATTTCAC TATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTT 319 TTerm_0295 NZ_LR027880.1 2087094 2087112 19 2087120 2087138 19 7 84 0 23 65 34 68 31 0 2087115 AAAAAAATCCCCATTAAGG CCTTAACAGGGACTTTTTT True ATTTTTATA CCGGGATAT True True + AAAAAAATCCCCATTAAGG CTATACA CCTTAACAGGGACTTTTTT CCGGGATAT 62 RIL182_RS09740 intergenic 2086819 2087155 - down AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATA GTGAAATTATGGATGCACAGAAATAAAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATATTATTTACATTTTACTTTTTTTACT TATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTT 319 TTerm_0296 NZ_LR027880.1 2096035 2096050 16 2096058 2096073 16 7 93 0 27 53 46 53 46 0 2096053 ATACGCAGGATACACC GGTATATCCTGCGTAT True TTCATAAAA ATATTTTAT True True + ATACGCAGGATACACC AGATAAA GGTATATCCTGCGTAT ATATTTTAT 70 RIL182_RS09795 intergenic 2096014 2096132 - down ACAGAAACGAATAATAGAATACACACTTTGTGAACATTCTATTATTAAGAATAAAATATATACGCAGGATATACCTTTATCTGGTGTATCCTGCGTATTTTATGAAAGGAATTTTAAC TAGAGTGGCGTGAAATGTACAAATAACAGAAACGAATAATAGAATACACACTTTGTGAACATTCTATTATTAAGAATAAAATATATACGCAGGATATACCTTTATCTGGTGTATCCTGCGTATTTTATGAAAGGAATTTTAACATGAAACGATTGCTATCTGTTCTGT GTTAAAATTCCTTTCATAAAATACGCAGGATACACCAGATAAAGGTATATCCTGCGTAT 59 TTerm_0297 NZ_LR027880.1 2134421 2134433 13 2134442 2134454 13 8 76 0 11 69 30 70 30 0 2134437 AAACACTAAGGTT AACCTCTGTTTTT True TCATGATAA CCCCTGTTT True True + AAACACTAAGGTT TACGCTTT AACCTCTGTTTTT CCCCTGTTT 46 RIL182_RS09960 intergenic 2134322 2134440 + down CAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTT CGTTGATGAGTTTGAGAGTGTATAACAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTTTAACCTCTGTTTTTCCCCTGTTTCC CAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTTTAACCTCTGTTTTT 132 TTerm_0298 NZ_LR027880.1 2134421 2134433 13 2134442 2134454 13 8 76 0 11 69 30 70 30 0 2134437 AAACACTAAGGTT AACCTCTGTTTTT True TCATGATAA CCCCTGTTT True True + AAACACTAAGGTT TACGCTTT AACCTCTGTTTTT CCCCTGTTT 46 RIL182_RS09965 intergenic 2134322 2134440 - down AAGCGTAAACCTTAGTGTTTTATCATGAAAAAAACAGGGATTACATGTTACTATAGTATGTAATCCCCGTTTTTTAGATGTATTCGATCGAAATAAAATAAATCTTTTTTAAAATCTG GGAAACAGGGGAAAAACAGAGGTTAAAGCGTAAACCTTAGTGTTTTATCATGAAAAAAACAGGGATTACATGTTACTATAGTATGTAATCCCCGTTTTTTAGATGTATTCGATCGAAATAAAATAAATCTTTTTTAAAATCTGTTATACACTCTCAAACTCATCAACG CAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTTTAACCTCTGTTTTT 132 TTerm_0299 NZ_LR027880.1 2137888 2137908 21 2137913 2137933 21 4 95 0 37 59 40 60 40 0 2137910 GCATGAAAAAAGTCAGTCACA TGTGGCTGACTTTTTTCATGC True CATTAAAAG AATGTTTTC True True + GCATGAAAAAAGTCAGTCACA TGTT TGTGGCTGACTTTTTTCATGC AATGTTTTC 106 RIL182_RS09980 intergenic 2137861 2137955 + down ATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGCAATGTTTTCTTAGCTGTTTCCT CGAATTTATTCCTGAAGAAGAATAAATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGCAATGTTTTCTTAGCTGTTTCCTTACGGATGATATCCCAAATTTACAC ATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGC 72 TTerm_0300 NZ_LR027880.1 2137888 2137908 21 2137913 2137933 21 4 95 0 37 59 40 60 40 0 2137910 GCATGAAAAAAGTCAGTCACA TGTGGCTGACTTTTTTCATGC True CATTAAAAG AATGTTTTC True True + GCATGAAAAAAGTCAGTCACA TGTT TGTGGCTGACTTTTTTCATGC AATGTTTTC 106 RIL182_RS09985 intergenic 2137861 2137955 - down AGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATGCTTTTAATGTACACCAAAGGCATATAT GTGTAAATTTGGGATATCATCCGTAAGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATGCTTTTAATGTACACCAAAGGCATATATTTATTCTTCTTCAGGAATAAATTCG ATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGC 72 TTerm_0301 NZ_LR027880.1 2157828 2157842 15 2157849 2157863 15 6 93 0 25 56 43 57 42 0 2157845 AAAAACGTCTCTGCC GGAAGAGACGTTTTT True TTATAAAGA GTATGTCAG True True + AAAAACGTCTCTGCC TGTTAT GGAAGAGACGTTTTT GTATGTCAG 74 RIL182_RS10065 intergenic 2157766 2157879 + down TCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTTGTATGTCAGCCGAATT AAACAATGGATGTGGTTTCTGCTAGTCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTTGTATGTCAGCCGAATTTACGGACGCTTTGTGTTCTGATCCC TCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTT 97 TTerm_0302 NZ_LR027880.1 2157828 2157842 15 2157849 2157863 15 6 93 0 25 56 43 57 42 0 2157845 AAAAACGTCTCTGCC GGAAGAGACGTTTTT True TTATAAAGA GTATGTCAG True True + AAAAACGTCTCTGCC TGTTAT GGAAGAGACGTTTTT GTATGTCAG 74 RIL182_RS10070 intergenic 2157766 2157879 - down AATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTTTCTTTATAAATCTTATAGGGCGGCCGGAATATCCGACCGCCATTTCAGAACAGATGATCTGA GGGATCAGAACACAAAGCGTCCGTAAATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTTTCTTTATAAATCTTATAGGGCGGCCGGAATATCCGACCGCCATTTCAGAACAGATGATCTGACTAGCAGAAACCACATCCATTGTTT TCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTT 97 TTerm_0303 NZ_LR027880.1 2158844 2158855 12 2158860 2158871 12 4 91 0 19 54 45 54 45 0 2158857 AAAAGGGATGGA TCCACCCCTTTT True TAACTAATA GTATCTGCA True True + AAAAGGGATGGA ACAC TCCACCCCTTTT GTATCTGCA 70 RIL182_RS10080 intergenic 2158838 2158915 + down CTAATAAAAGGGATGGAACACTCCACCCCTTTTGTATCTGCATATTTATTTATGATTTCTTAACATTTTCTCAAGTC CATGAAAGACCGGAAGCAAAATTAACTAATAAAAGGGATGGAACACTCCACCCCTTTTGTATCTGCATATTTATTTATGATTTCTTAACATTTTCTCAAGTCTACCAGATGGAAGCTACACTTACCT CTAATAAAAGGGATGGAACACTCCACCCCTTTT 33 TTerm_0304 NZ_LR027880.1 2158844 2158855 12 2158860 2158871 12 4 91 0 19 54 45 54 45 0 2158857 AAAAGGGATGGA TCCACCCCTTTT True TAACTAATA GTATCTGCA True True + AAAAGGGATGGA ACAC TCCACCCCTTTT GTATCTGCA 70 RIL182_RS10085 intergenic 2158838 2158915 - down GACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTTTATTAG AGGTAAGTGTAGCTTCCATCTGGTAGACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTTTATTAGTTAATTTTGCTTCCGGTCTTTCATG CTAATAAAAGGGATGGAACACTCCACCCCTTTT 33 TTerm_0305 NZ_LR027880.1 2160315 2160325 11 2160332 2160342 11 6 81 0 12 63 36 66 33 0 2160328 TTTCGGGAAGA TCTTTCAGAAA True TATCCTGCT CTGTTTTAT False True + TTTCGGGAAGA CCTGTT TCTTTCAGAAA CTGTTTTAT 40 RIL182_RS10090 intergenic 2160240 2160348 - down AAACAGTTTCTGAAAGAAACAGGTCTTCCCGAAAGCAGGATAAAAACACAGACTGGATGTAACATTTTCCGGTGTGTGTAATTAAAAAGAAAACGGGGAGGAATGGAT AACTTGATAATACGGATAATTCATAAAACAGTTTCTGAAAGAAACAGGTCTTCCCGAAAGCAGGATAAAAACACAGACTGGATGTAACATTTTCCGGTGTGTGTAATTAAAAAGAAAACGGGGAGGAATGGATATGCGGTATGGCAGAAAAATTTGCA ATCCATTCCTCCCCGTTTTCTTTTTAATTACACACACCGGAAAATGTTACATCCAGTCTGTGTTTTTATCCTGCTTTCGGGAAGACCTGTTTCTTTCAGAAA 102 TTerm_0306 NZ_LR027880.1 2163883 2163904 22 2163909 2163930 22 4 86 0 29 56 43 57 42 0 2163906 GATAGGAAAATGCCGTACGGTC GATCGTACGGCATTTTATTATC True TTATGAAAG GGTTGAATA True True + GATAGGAAAATGCCGTACGGTC GGTT GATCGTACGGCATTTTATTATC GGTTGAATA 82 RIL182_RS10095 intergenic 2163887 2164222 + down GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT TCATTATACGATTTATGAAAGATAGGAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATC 43 TTerm_0307 NZ_LR027880.1 2163883 2163904 22 2163909 2163930 22 4 86 0 29 56 43 57 42 0 2163906 GATAGGAAAATGCCGTACGGTC GATCGTACGGCATTTTATTATC True TTATGAAAG GGTTGAATA True True + GATAGGAAAATGCCGTACGGTC GGTT GATCGTACGGCATTTTATTATC GGTTGAATA 82 RIL182_RS10105 intergenic 2163887 2164222 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTATCTTTCATAAATCGTATAATGA GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATC 43 TTerm_0308 NZ_LR027880.1 2164106 2164120 15 2164127 2164141 15 6 80 0 15 80 20 83 16 0 2164123 ATAATGGAAATGATA TATCGTTTCTTTTAT True TCATGTAAA ATCGTCCGG False True + ATAATGGAAATGATA AACAGC TATCGTTTCTTTTAT ATCGTCCGG 46 RIL182_RS10095 intergenic 2163887 2164222 + down GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT TCATTATACGATTTATGAAAGATAGGAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTAT 254 TTerm_0309 NZ_LR027880.1 2164106 2164120 15 2164127 2164141 15 6 80 0 15 80 20 83 16 0 2164123 ATAATGGAAATGATA TATCGTTTCTTTTAT True TCATGTAAA ATCGTCCGG False True + ATAATGGAAATGATA AACAGC TATCGTTTCTTTTAT ATCGTCCGG 46 RIL182_RS10105 intergenic 2163887 2164222 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTATCTTTCATAAATCGTATAATGA GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTAT 254 TTerm_0310 NZ_LR027880.1 2164192 2164205 14 2164210 2164223 14 4 85 0 18 42 57 41 58 0 2164207 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS10095 intergenic 2163887 2164222 + down GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT TCATTATACGATTTATGAAAGATAGGAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 336 TTerm_0311 NZ_LR027880.1 2164192 2164205 14 2164210 2164223 14 4 85 0 18 42 57 41 58 0 2164207 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True + AAAACATGCCGCCC ATCA GGGCGGCACATTTT ATTTCTTCT 84 RIL182_RS10105 intergenic 2163887 2164222 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTATCTTTCATAAATCGTATAATGA GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTT 336 TTerm_0312 NZ_LR027880.1 2168529 2168543 15 2168548 2168562 15 4 93 0 25 43 56 42 57 0 2168545 AAAAAGTCCCCCGCC GGCGGAGGACTTTTT True TAGTGCTAA ATTACAACC True True + AAAAAGTCCCCCGCC TTAT GGCGGAGGACTTTTT ATTACAACC 90 RIL182_RS10130 intergenic 2168394 2168612 - down ACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAG AGACGGTTACAACGAAGAAAAGTTGACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAGGTGTTAAACGTGAAGCTGAAATGGA CTCACATGTCCTCCCTTTCTTCAACTCTGCTTAAGTATTTTGAATGAGGAGAACAAATAACCTCTTTTTCCTTTGTTATAATTCCATTAAAATCAATATGCAATGACTATTCACATTGCATATTGATAGTGCTAAAAAAGTCCCCCGCCTTATGGCGGAGGACTTTTT 168 TTerm_0313 NZ_LR027880.1 2177911 2177926 16 2177936 2177951 16 9 87 0 22 56 43 57 42 0 2177930 TAAGCAGTGATCTGTA TACAGACCGCTGCTTA True ATGAAAAAT AATTTTTGT True True + TAAGCAGTGATCTGTA TTTGTTCTT TACAGACCGCTGCTTA AATTTTTGT 60 RIL182_RS10170 intergenic 2177913 2177935 + down GCAGTGATCTGTATTTGTTCTT TTTAGGTGTCAGAAATGAAAAATAAGCAGTGATCTGTATTTGTTCTTTACAGACCGCTGCTTAAATTTTTGT GCAGTGATCTGTATTTGTTCTTTACAGACCGCTGCTTA 38 TTerm_0314 NZ_LR027880.1 2177911 2177926 16 2177936 2177951 16 9 87 0 22 56 43 57 42 0 2177930 TAAGCAGTGATCTGTA TACAGACCGCTGCTTA True ATGAAAAAT AATTTTTGT True True + TAAGCAGTGATCTGTA TTTGTTCTT TACAGACCGCTGCTTA AATTTTTGT 60 RIL182_RS10175 intergenic 2177913 2177935 - down AAGAACAAATACAGATCACTGC ACAAAAATTTAAGCAGCGGTCTGTAAAGAACAAATACAGATCACTGCTTATTTTTCATTTCTGACACCTAAA GCAGTGATCTGTATTTGTTCTTTACAGACCGCTGCTTA 38 TTerm_0315 NZ_LR027880.1 2181899 2181905 7 2181912 2181918 7 6 100 0 14 85 14 85 14 0 2181908 TTTAAAC GTTTAAA True TCCATACTT GCTTTTGAC False True + TTTAAAC CTCCTC GTTTAAA GCTTTTGAC 36 RIL182_RS10210 intergenic 2181895 2181914 - down AACGAGGAGGTTTAAAAGT GCGTGATAGAAAGTCAAAAGCTTTAAACGAGGAGGTTTAAAAGTATGGATATACAGGCACTTGGAATGC ACTTTTAAACCTCCTCGTTTAAA 23 TTerm_0316 NZ_LR027880.1 2253466 2253479 14 2253488 2253501 14 8 92 0 23 60 39 61 38 0 2253483 AAAAGAAGCTGCTT AAGCAGCTTCTCTT True TATTACATA CGTATTTTT True True + AAAAGAAGCTGCTT ATATTTCA AAGCAGCTTCTCTT CGTATTTTT 70 RIL182_RS10530 intergenic 2253412 2253637 - down ACAAAAGATCATATGGTACAGAAGATTTTTAAAGTACAGAAGAAGTAAAGAGTACAAAAGAAAGTTTACTGTACAGAAGAATATTCGGTATACAGATGAAAAATCATTGATATACAAAGGAATATTTAAAAATACGAAGAGAAGCTGCTTTGAAATATAAGCAGCTTCTTTTATGTAATAAAATGACGGAAATCAAAGGTATTTGATACAGAAACGGAGATTAGC GTAGGAAACGGCATTTTGGGTTTATACAAAAGATCATATGGTACAGAAGATTTTTAAAGTACAGAAGAAGTAAAGAGTACAAAAGAAAGTTTACTGTACAGAAGAATATTCGGTATACAGATGAAAAATCATTGATATACAAAGGAATATTTAAAAATACGAAGAGAAGCTGCTTTGAAATATAAGCAGCTTCTTTTATGTAATAAAATGACGGAAATCAAAGGTATTTGATACAGAAACGGAGATTAGCGTGAAAAAAAGAAATATGCCAAAAA GCTAATCTCCGTTTCTGTATCAAATACCTTTGATTTCCGTCATTTTATTACATAAAAGAAGCTGCTTATATTTCAAAGCAGCTTCTCTT 89 TTerm_0317 NZ_LR027880.1 2261015 2261027 13 2261032 2261044 13 4 100 0 26 53 46 53 46 0 2261029 AAAAACGCTGACC GGTCAGCGTTTTT True TCCAATGGA TATCTGCTA True True + AAAAACGCTGACC CGCC GGTCAGCGTTTTT TATCTGCTA 84 RIL182_RS10560 intergenic 2261025 2261051 + down CCCGCCGGTCAGCGTTTTTTATCTGC ATATATTCCAATGGAAAAACGCTGACCCGCCGGTCAGCGTTTTTTATCTGCTATCGTTCTATCTTAAGTTCAAACC CCCGCCGGTCAGCGTTTTT 19 TTerm_0318 NZ_LR027880.1 2261015 2261027 13 2261032 2261044 13 4 100 0 26 53 46 53 46 0 2261029 AAAAACGCTGACC GGTCAGCGTTTTT True TCCAATGGA TATCTGCTA True True + AAAAACGCTGACC CGCC GGTCAGCGTTTTT TATCTGCTA 84 RIL182_RS10565 intergenic 2261025 2261051 - down GCAGATAAAAAACGCTGACCGGCGGG GGTTTGAACTTAAGATAGAACGATAGCAGATAAAAAACGCTGACCGGCGGGTCAGCGTTTTTCCATTGGAATATAT CCCGCCGGTCAGCGTTTTT 19 TTerm_0319 NZ_LR027880.1 2265244 2265257 14 2265262 2265275 14 4 100 0 28 42 57 42 57 0 2265259 AAAACGGCTGTGCC GGCACAGCCGTTTT True GAACAGTAA CTATTCTTT True True + AAAACGGCTGTGCC TTTG GGCACAGCCGTTTT CTATTCTTT 88 RIL182_RS10585 intergenic 2265198 2265285 + down ACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTTCTATTCTTTT TGAGTTGATTCATAATGAACTGTAAACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTTCTATTCTTTTTACATTCCGAGGAACTGTTTTACAA ACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTT 77 TTerm_0320 NZ_LR027880.1 2265244 2265257 14 2265262 2265275 14 4 100 0 28 42 57 42 57 0 2265259 AAAACGGCTGTGCC GGCACAGCCGTTTT True GAACAGTAA CTATTCTTT True True + AAAACGGCTGTGCC TTTG GGCACAGCCGTTTT CTATTCTTT 88 RIL182_RS10590 intergenic 2265198 2265285 - down AAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTTTTACTGTTCATAATAACAGTCACTCTATTGTTTATGATGTACCTGT TTGTAAAACAGTTCCTCGGAATGTAAAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTTTTACTGTTCATAATAACAGTCACTCTATTGTTTATGATGTACCTGTTTACAGTTCATTATGAATCAACTCA ACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTT 77 TTerm_0321 NZ_LR027880.1 2269513 2269522 10 2269532 2269541 10 9 90 0 15 80 20 77 22 0 2269526 TTTATGCAAA TTTGCTTAAA True TACTGCTTT TATTTTCTA False True + TTTATGCAAA CCAATTCTA TTTGCTTAAA TATTTTCTA 46 RIL182_RS10600 intergenic 2269410 2269537 + down ATCTATTTGATCAAAAACATCCGGCAGACCTTTTTTAGTTGCCGGATGTTTTTTATGTCATATAATATTGGCAGGAAACGTAATGTCACCTTTTTACTGCTTTTTATGCAAACCAATTCTATTTGCT AATATTTACACAAAATCAGTTTTAAATCTATTTGATCAAAAACATCCGGCAGACCTTTTTTAGTTGCCGGATGTTTTTTATGTCATATAATATTGGCAGGAAACGTAATGTCACCTTTTTACTGCTTTTTATGCAAACCAATTCTATTTGCTTAAATATTTTCTACCGCATCACGCA ATCTATTTGATCAAAAACATCCGGCAGACCTTTTTTAGTTGCCGGATGTTTTTTATGTCATATAATATTGGCAGGAAACGTAATGTCACCTTTTTACTGCTTTTTATGCAAACCAATTCTATTTGCTTAAA 131 TTerm_0322 NZ_LR027880.1 2269513 2269522 10 2269532 2269541 10 9 90 0 15 80 20 77 22 0 2269526 TTTATGCAAA TTTGCTTAAA True TACTGCTTT TATTTTCTA False True + TTTATGCAAA CCAATTCTA TTTGCTTAAA TATTTTCTA 46 RIL182_RS10605 intergenic 2269410 2269537 - down AGCAAATAGAATTGGTTTGCATAAAAAGCAGTAAAAAGGTGACATTACGTTTCCTGCCAATATTATATGACATAAAAAACATCCGGCAACTAAAAAAGGTCTGCCGGATGTTTTTGATCAAATAGAT TGCGTGATGCGGTAGAAAATATTTAAGCAAATAGAATTGGTTTGCATAAAAAGCAGTAAAAAGGTGACATTACGTTTCCTGCCAATATTATATGACATAAAAAACATCCGGCAACTAAAAAAGGTCTGCCGGATGTTTTTGATCAAATAGATTTAAAACTGATTTTGTGTAAATATT ATCTATTTGATCAAAAACATCCGGCAGACCTTTTTTAGTTGCCGGATGTTTTTTATGTCATATAATATTGGCAGGAAACGTAATGTCACCTTTTTACTGCTTTTTATGCAAACCAATTCTATTTGCTTAAA 131 TTerm_0323 NZ_LR027880.1 2280854 2280867 14 2280873 2280886 14 5 92 0 23 67 32 69 30 0 2280869 AAAACAGCCTATCA TGATAAGCTGTTTT True CAAATAATA TAATTATGT True True + AAAACAGCCTATCA TTTCC TGATAAGCTGTTTT TAATTATGT 54 RIL182_RS10650 intergenic 2280835 2280900 - down ACAGTACATAATTAAAAACAGCTTATCAGGAAATGATAGGCTGTTTTATTATTTGGAGGTTGAAA CATCCTTCTTCTTTGAGAAAAAGTAACAGTACATAATTAAAAACAGCTTATCAGGAAATGATAGGCTGTTTTATTATTTGGAGGTTGAAAATGAAAAAAATATATAAAAGAATAT TTTCAACCTCCAAATAATAAAACAGCCTATCATTTCCTGATAAGCTGTTTT 51 TTerm_0324 NZ_LR027880.1 2303412 2303431 20 2303441 2303460 20 9 90 0 30 75 25 77 22 0 2303435 AAAAAAGAACTGCACGTTAA TTAACATACAGTTCTTTTTT True GGTATTACA CAAATCCAT True True + AAAAAAGAACTGCACGTTAA TAACTATCT TTAACATACAGTTCTTTTTT CAAATCCAT 68 RIL182_RS10745 intergenic 2303378 2303518 + down TGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTTCAAATCCATATATCTTGTATATAGATTATTTATAATTTTTAAACTATTTGTTTTTTCT AGTGGACGGAATTATGGGATTGTAATGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTTCAAATCCATATATCTTGTATATAGATTATTTATAATTTTTAAACTATTTGTTTTTTCTTATGCCTCTGCCGGAACATCCTTCA TGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTT 82 TTerm_0325 NZ_LR027880.1 2303412 2303431 20 2303441 2303460 20 9 90 0 30 75 25 77 22 0 2303435 AAAAAAGAACTGCACGTTAA TTAACATACAGTTCTTTTTT True GGTATTACA CAAATCCAT True True + AAAAAAGAACTGCACGTTAA TAACTATCT TTAACATACAGTTCTTTTTT CAAATCCAT 68 RIL182_RS10750 intergenic 2303378 2303518 - down AGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTTTGTAATACCTGACAATAGAATGGCCTCATCGGCA TGAAGGATGTTCCGGCAGAGGCATAAGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTTTGTAATACCTGACAATAGAATGGCCTCATCGGCATTACAATCCCATAATTCCGTCCACT TGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTT 82 TTerm_0326 NZ_LR027880.1 2305719 2305729 11 2305734 2305745 12 4 91 8 12 65 34 63 36 0 2305731 AAAGAACCTGT ACAGGATTCTTT True CCTTTGGCA CTTATTTTA False True + AAAGAACCTGT TTTC ACAGGATTCTTT CTTATTTTA 48 RIL182_RS10755 intergenic 2305611 2305869 - down AGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGC TTGAGCGCTTAGGTCTTAGAAAATAAGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGCATGTATAAAAGTTTTTCAATGGAAC GCGTTTTCTCCTTTTCTCTGTGGAGACAGAAGCACCGAAACTACTGAAAAATCCACGACCTCTCATACATTTTTCAGTGGTCTCGGAAATATACTTCTGCCTTTGGCAAAGAACCTGTTTTCACAGGATTCTTT 134 TTerm_0327 NZ_LR027880.1 2315811 2315817 7 2315822 2315828 7 4 100 0 14 28 71 28 71 0 2315819 TGCCCAG CTGGGCA True GGGAGCAAT GGATTTTCC False True + TGCCCAG CACA CTGGGCA GGATTTTCC 68 RIL182_RS10805 intergenic 2315732 2315853 - down AAGATGAACTAAAGGAGGAAAATCCTGCCCAGTGTGCTGGGCATTGCTCCCTGCAAGGGCACATGCTATGCAAAAACAGCATAGCAGGCATTTTGCTCCGCAAAACAAGGAGGATTTAATA TGATCCGTCTGGCATTTGACTTTTAAAGATGAACTAAAGGAGGAAAATCCTGCCCAGTGTGCTGGGCATTGCTCCCTGCAAGGGCACATGCTATGCAAAAACAGCATAGCAGGCATTTTGCTCCGCAAAACAAGGAGGATTTAATAATGAGTAATAATGAGTTGTTAGAAG TATTAAATCCTCCTTGTTTTGCGGAGCAAAATGCCTGCTATGCTGTTTTTGCATAGCATGTGCCCTTGCAGGGAGCAATGCCCAGCACACTGGGCA 96 TTerm_0328 NZ_LR027880.1 2316475 2316483 9 2316489 2316497 9 5 88 0 13 83 16 87 12 0 2316485 AAAATGCAA TTACATTTT True TCCTCTTTA TTTCTGACA True True + AAAATGCAA GCCTT TTACATTTT TTTCTGACA 34 RIL182_RS10810 intergenic 2316320 2316606 - down ACTCACTGTTATTTCGAAAGAGATAAACAGCCCAACCCGGAAGTTGTCAGTATGCCAGATGGTATATTGGCAATTTTTTATGTTGTATGATTTTATTGTTTGTCAGAAAAAAATGTAAAAGGCTTGCATTTTAAAGAGGAAAGTGTTACATTAATAAATGATAACACGATGACTTGATTGAGAGAGGACGAAAGCCCTCTCTCAATTCACGTTTAGGAGCCATGTATTTCTGCAACAGAAATGCATGCAGAAGTAAAACTGAATATGGAAGAAAGAAGGTGTACAC CAGGGGTTCGATTCCCCTACGAGCTACTCACTGTTATTTCGAAAGAGATAAACAGCCCAACCCGGAAGTTGTCAGTATGCCAGATGGTATATTGGCAATTTTTTATGTTGTATGATTTTATTGTTTGTCAGAAAAAAATGTAAAAGGCTTGCATTTTAAAGAGGAAAGTGTTACATTAATAAATGATAACACGATGACTTGATTGAGAGAGGACGAAAGCCCTCTCTCAATTCACGTTTAGGAGCCATGTATTTCTGCAACAGAAATGCATGCAGAAGTAAAACTGAATATGGAAGAAAGAAGGTGTACACATGTCAAAACGTGAAACATACGAAA GTGTACACCTTCTTTCTTCCATATTCAGTTTTACTTCTGCATGCATTTCTGTTGCAGAAATACATGGCTCCTAAACGTGAATTGAGAGAGGGCTTTCGTCCTCTCTCAATCAAGTCATCGTGTTATCATTTATTAATGTAACACTTTCCTCTTTAAAATGCAAGCCTTTTACATTTT 177 TTerm_0329 NZ_LR027880.1 2318193 2318206 14 2318216 2318229 14 9 100 0 28 71 28 71 28 0 2318210 AAAACGACTGTAAA TTTACAGTCGTTTT True TGTAAAGAA CCGTGTTTT True True + AAAACGACTGTAAA TTTTTTACG TTTACAGTCGTTTT CCGTGTTTT 64 RIL182_RS10830 intergenic 2318094 2318352 - down ATCTGCATAGCTGAAACAGGGAAAGTTGTCAAAGGAAGAGATTGCAGACGGTGTGGGACTTACGATAGAAGAGGTCGATGTCTTTGCGCAGGAATAAATAATTTATAAATGATAAAAACACGGAAAACGACTGTAAACGTAAAAAATTTACAGTCGTTTTTCTTTACAAATAATAATATGGTTATTGTTGACATATTATATATTGAATGATACCATTATATATAGTAATAAAAACTATATACAATAGAGGGAAAGACA ACAATCCGAACGGATATGACGATTGATCTGCATAGCTGAAACAGGGAAAGTTGTCAAAGGAAGAGATTGCAGACGGTGTGGGACTTACGATAGAAGAGGTCGATGTCTTTGCGCAGGAATAAATAATTTATAAATGATAAAAACACGGAAAACGACTGTAAACGTAAAAAATTTACAGTCGTTTTTCTTTACAAATAATAATATGGTTATTGTTGACATATTATATATTGAATGATACCATTATATATAGTAATAAAAACTATATACAATAGAGGGAAAGACAATGAAGAAAATTTTTTCAATGAATC TGTCTTTCCCTCTATTGTATATAGTTTTTATTACTATATATAATGGTATCATTCAATATATAATATGTCAACAATAACCATATTATTATTTGTAAAGAAAAACGACTGTAAATTTTTTACGTTTACAGTCGTTTT 135 TTerm_0330 NZ_LR027880.1 2322396 2322407 12 2322413 2322424 12 5 100 0 24 66 33 66 33 0 2322409 AAAAGTGGATAG CTATCCACTTTT True GCATTAAAA AATACTCAA True True + AAAAGTGGATAG GCAGA CTATCCACTTTT AATACTCAA 72 RIL182_RS10860 intergenic 2322342 2322656 - down ATTAATATCAGGATAGAAAGTTTAAGAATGTCTTAGCAGGGGACATTCTTAAACTTTAAAAAGTACTTGACAGAGATTTTTTGAAGTGGTATAGTATAATAGTTGTTGAAAACAAAGTAGAGTATCCACTCTCACCGGAGCACCAGCATTCGTGTGACTCATGGTTTTATATTCAAGGCATCGGGAATATTCCTGTTGTTTGAAGTACCGCACCTTGCGAGTATTGAGTATTAAAAGTGGATAGTCTGCCTATCCACTTTTTTTAATGCAAGTAAAGAATAATATTTTGGAGGTGCAATACCATTAGCGAGTTA GTAAATACATTCTTCCACAGGAATAATTAATATCAGGATAGAAAGTTTAAGAATGTCTTAGCAGGGGACATTCTTAAACTTTAAAAAGTACTTGACAGAGATTTTTTGAAGTGGTATAGTATAATAGTTGTTGAAAACAAAGTAGAGTATCCACTCTCACCGGAGCACCAGCATTCGTGTGACTCATGGTTTTATATTCAAGGCATCGGGAATATTCCTGTTGTTTGAAGTACCGCACCTTGCGAGTATTGAGTATTAAAAGTGGATAGTCTGCCTATCCACTTTTTTTAATGCAAGTAAAGAATAATATTTTGGAGGTGCAATACCATTAGCGAGTTAATGATTAATGAACAGATCAGAGACA TAACTCGCTAATGGTATTGCACCTCCAAAATATTATTCTTTACTTGCATTAAAAAAAGTGGATAGGCAGACTATCCACTTTT 82 TTerm_0331 NZ_LR027880.1 2334237 2334251 15 2334261 2334275 15 9 100 0 30 60 40 60 40 0 2334255 AAAAAACACAGGGGA TCCCCTGTGTTTTTT True TATGTTCAA CTATGCAAA True True + AAAAAACACAGGGGA CTTCCGTTA TCCCCTGTGTTTTTT CTATGCAAA 92 RIL182_RS10900 intergenic 2334201 2334276 + down TCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTTC GGGAACTGGTTCTTCTGACAAATGATCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTTCTATGCAAAATCAAACAGTGAGAGCT TCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTT 74 TTerm_0332 NZ_LR027880.1 2334237 2334251 15 2334261 2334275 15 9 100 0 30 60 40 60 40 0 2334255 AAAAAACACAGGGGA TCCCCTGTGTTTTTT True TATGTTCAA CTATGCAAA True True + AAAAAACACAGGGGA CTTCCGTTA TCCCCTGTGTTTTTT CTATGCAAA 92 RIL182_RS10905 intergenic 2334201 2334276 - down GAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTTTTGAACATAAAACGAAACTGTGGATCCGGTGCAGGA AGCTCTCACTGTTTGATTTTGCATAGAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTTTTGAACATAAAACGAAACTGTGGATCCGGTGCAGGATCATTTGTCAGAAGAACCAGTTCCC TCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTT 74 TTerm_0333 NZ_LR027880.1 2342225 2342240 16 2342245 2342260 16 4 93 0 27 65 34 66 33 0 2342242 GTGCGAAAAATAAGCT AGCTTATTTTTCACAC True AAATAGCCG TAATATCCT True True + GTGCGAAAAATAAGCT ATCA AGCTTATTTTTCACAC TAATATCCT 70 RIL182_RS10925 intergenic 2342105 2342274 - down AACAGAGGATATTAGTGTGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAACAAATAGCTTTGATGGCAAGGCATAAAAAATATGCCTCCGAGAATTTGAGATTCTCGTCGCCTCTTCGCAACAAGTTGCTTAGAAAAGAGGATTTGT TTGCAGCAAATTTTATTGTATTGTAAACAGAGGATATTAGTGTGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAACAAATAGCTTTGATGGCAAGGCATAAAAAATATGCCTCCGAGAATTTGAGATTCTCGTCGCCTCTTCGCAACAAGTTGCTTAGAAAAGAGGATTTGTATGAAAAAAATAGCAATCTTAGGCT ACAAATCCTCTTTTCTAAGCAACTTGTTGCGAAGAGGCGACGAGAATCTCAAATTCTCGGAGGCATATTTTTTATGCCTTGCCATCAAAGCTATTTGTTTTGCTCAGAAACAAATAGCCGTGCGAAAAATAAGCTATCAAGCTTATTTTTCACAC 155 TTerm_0334 NZ_LR027880.1 2347178 2347196 19 2347201 2347219 19 4 89 0 28 78 21 82 17 0 2347198 AAAAAAGCGCAAAAAAATT AATTTTTTCGCACTTTTTT True TTTCAAATA TATTATTGT True True + AAAAAAGCGCAAAAAAATT GATT AATTTTTTCGCACTTTTTT TATTATTGT 56 RIL182_RS10955 intergenic 2347114 2347258 - down AAATAGTACAATAGAAATAAAAATAATCAGACAATAATAAAAAAAGTGCGAAAAAATTAATCAATTTTTTTGCGCTTTTTTATTTGAAAAATAGAAAAATGTGTTACAATAGATAGGTACTAACGATTACCTTGGGGGTATTGT TTATTGCAAACATACTTGGAAAATAAAATAGTACAATAGAAATAAAAATAATCAGACAATAATAAAAAAAGTGCGAAAAAATTAATCAATTTTTTTGCGCTTTTTTATTTGAAAAATAGAAAAATGTGTTACAATAGATAGGTACTAACGATTACCTTGGGGGTATTGTATGCAGGATAAAGATTCAGAAGTAC ACAATACCCCCAAGGTAATCGTTAGTACCTATCTATTGTAACACATTTTTCTATTTTTCAAATAAAAAAGCGCAAAAAAATTGATTAATTTTTTCGCACTTTTTT 105 TTerm_0335 NZ_LR027880.1 2353824 2353833 10 2353841 2353850 10 7 90 0 15 65 35 66 33 0 2353836 TTTTACCCAA TTGGGTAGAA True CTCTTCCAT ACTTTTCAT False True + TTTTACCCAA TTTCCCT TTGGGTAGAA ACTTTTCAT 54 RIL182_RS10970 intergenic 2353610 2353907 + down ATGATTTCCTGTCATAAACAGATGTTTTTACATCGAAGCATAAAATAACCCTTATAAACGATGTCACCACCATTTATAAGGGTTATCAATCTTTTCAGAAACTTAATGCAAAACCAAATTAAGCGTTCATCTGTTTTGCCAACTTTTATTTACTGTTTTCTCAAATGCCCATTTTATAAGGCTTTCTACGCTTTCCTCAATTCTGCTCTTCCATTTTACCCAATTTCCCTTTGGGTAGAAACTTTTCATTCCCGTTGAAAGCAAATTTCTCTTATTTTGCTATGTTGGGTACTCTTT TTTTCAGCGGAAGATCAATGTTTAGATGATTTCCTGTCATAAACAGATGTTTTTACATCGAAGCATAAAATAACCCTTATAAACGATGTCACCACCATTTATAAGGGTTATCAATCTTTTCAGAAACTTAATGCAAAACCAAATTAAGCGTTCATCTGTTTTGCCAACTTTTATTTACTGTTTTCTCAAATGCCCATTTTATAAGGCTTTCTACGCTTTCCTCAATTCTGCTCTTCCATTTTACCCAATTTCCCTTTGGGTAGAAACTTTTCATTCCCGTTGAAAGCAAATTTCTCTTATTTTGCTATGTTGGGTACTCTTTTATGCACACTGGGTAGAGTTTTTAT ATGATTTCCTGTCATAAACAGATGTTTTTACATCGAAGCATAAAATAACCCTTATAAACGATGTCACCACCATTTATAAGGGTTATCAATCTTTTCAGAAACTTAATGCAAAACCAAATTAAGCGTTCATCTGTTTTGCCAACTTTTATTTACTGTTTTCTCAAATGCCCATTTTATAAGGCTTTCTACGCTTTCCTCAATTCTGCTCTTCCATTTTACCCAATTTCCCTTTGGGTAGAA 240 TTerm_0336 NZ_LR027880.1 2353824 2353833 10 2353841 2353850 10 7 90 0 15 65 35 66 33 0 2353836 TTTTACCCAA TTGGGTAGAA True CTCTTCCAT ACTTTTCAT False True + TTTTACCCAA TTTCCCT TTGGGTAGAA ACTTTTCAT 54 RIL182_RS10975 intergenic 2353610 2353907 - down AAAGAGTACCCAACATAGCAAAATAAGAGAAATTTGCTTTCAACGGGAATGAAAAGTTTCTACCCAAAGGGAAATTGGGTAAAATGGAAGAGCAGAATTGAGGAAAGCGTAGAAAGCCTTATAAAATGGGCATTTGAGAAAACAGTAAATAAAAGTTGGCAAAACAGATGAACGCTTAATTTGGTTTTGCATTAAGTTTCTGAAAAGATTGATAACCCTTATAAATGGTGGTGACATCGTTTATAAGGGTTATTTTATGCTTCGATGTAAAAACATCTGTTTATGACAGGAAATCAT ATAAAAACTCTACCCAGTGTGCATAAAAGAGTACCCAACATAGCAAAATAAGAGAAATTTGCTTTCAACGGGAATGAAAAGTTTCTACCCAAAGGGAAATTGGGTAAAATGGAAGAGCAGAATTGAGGAAAGCGTAGAAAGCCTTATAAAATGGGCATTTGAGAAAACAGTAAATAAAAGTTGGCAAAACAGATGAACGCTTAATTTGGTTTTGCATTAAGTTTCTGAAAAGATTGATAACCCTTATAAATGGTGGTGACATCGTTTATAAGGGTTATTTTATGCTTCGATGTAAAAACATCTGTTTATGACAGGAAATCATCTAAACATTGATCTTCCGCTGAAAA ATGATTTCCTGTCATAAACAGATGTTTTTACATCGAAGCATAAAATAACCCTTATAAACGATGTCACCACCATTTATAAGGGTTATCAATCTTTTCAGAAACTTAATGCAAAACCAAATTAAGCGTTCATCTGTTTTGCCAACTTTTATTTACTGTTTTCTCAAATGCCCATTTTATAAGGCTTTCTACGCTTTCCTCAATTCTGCTCTTCCATTTTACCCAATTTCCCTTTGGGTAGAA 240 TTerm_0337 NZ_LR027880.1 2360818 2360827 10 2360836 2360845 10 8 100 0 20 50 50 50 50 0 2360831 AAAAGGGACG CGTCCCTTTT True TATGATATA GTTTTGTCA True True + AAAAGGGACG TTAACCTG CGTCCCTTTT GTTTTGTCA 80 RIL182_RS11030 intergenic 2360784 2360868 - down AGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAA CTGATGAGGCAGTAGAGGAAGCATAAGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAAATGGCTATTACAGCAGCTATGGTAA TTTTCAATCCTCCAAAATTATATTTTATGATATAAAAGGGACGTTAACCTGCGTCCCTTTT 61 TTerm_0338 NZ_LR027880.1 2365712 2365723 12 2365731 2365742 12 7 91 0 19 54 45 54 45 0 2365726 GGTGGGACTTTA TAAAATCCCACC True AAAAATCCG TTTTTATTA True True + GGTGGGACTTTA CATTCTA TAAAATCCCACC TTTTTATTA 38 RIL182_RS11070 intergenic 2365667 2365749 - down ATAAAAAGGTGGGATTTTATAGAATGTAAAGTCCCACCGGATTTTTACCTGGTGTGCAAAATGAGAGGAGAATCAGCAATTC ATGCACTGGTAGAAGAAAATAATTAATAAAAAGGTGGGATTTTATAGAATGTAAAGTCCCACCGGATTTTTACCTGGTGTGCAAAATGAGAGGAGAATCAGCAATTCATGGGAAATTTAACGTTGGAAGACG GAATTGCTGATTCTCCTCTCATTTTGCACACCAGGTAAAAATCCGGTGGGACTTTACATTCTATAAAATCCCACC 75 TTerm_0339 NZ_LR027880.1 2394889 2394895 7 2394902 2394908 7 6 100 0 14 85 14 85 14 0 2394898 AAAAAAC GTTTTTT True ATATCTCAA ATTTTTTTT False True + AAAAAAC ACAAGA GTTTTTT ATTTTTTTT 36 RIL182_RS11230 intergenic 2394828 2395251 - down AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGT AGAAAGAGAATCATAAGAATAGTTAAAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGTATGTTTACAACAAATGTATTTGACT ACTGTTGCTCCTTTCATGCACTATTTTCTATATTATTCTATTTTATTATAAAATATCTCAAAAAAACACAAGAGTTTTTT 80 TTerm_0340 NZ_LR027880.1 2395199 2395219 21 2395228 2395248 21 8 85 0 27 69 30 72 27 0 2395223 CAAAAAGGAATCCGCTATGTT AACATAACAAATTCCTTTTTG True GTACGACTC TTTTAACTA True True + CAAAAAGGAATCCGCTATGTT TAACAAAT AACATAACAAATTCCTTTTTG TTTTAACTA 62 RIL182_RS11230 intergenic 2394828 2395251 - down AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGT AGAAAGAGAATCATAAGAATAGTTAAAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGTATGTTTACAACAAATGTATTTGACT ACTGTTGCTCCTTTCATGCACTATTTTCTATATTATTCTATTTTATTATAAAATATCTCAAAAAAACACAAGAGTTTTTTATTTTTTTTTCGTAGTTTTTTCCCGTATTTTGTATTATTTTATGATTTGGTGTACTACAATTTGTCCTTATCTTTCATATTTCTCTCTTTTTCGACATTTTCCGCGTTTTTGCGCGCATCTTCTTCAGATGAAACACCAGCGTTTCCGCAAAAACATCCCCGAAAATGAAAATTTTTCAAGAAGATTTTTATCTTATCATTCGATTTTTCAAATTTAGGGATATGAAACAGCAGGTTTCATACAACGAATGGCATTCATCTGTATTCTTTCCACTTTCAGGTGTACGACTCAAAAAGGAATCCGCTATGTTTAACAAATAACATAACAAATTCCTTTTTG 420 TTerm_0341 NZ_LR027880.1 2398331 2398336 6 2398346 2398351 6 9 100 0 12 83 16 83 16 0 2398340 ATCTAA TTAGAT True ATTGCCATA TTTTCTGAT False True + ATCTAA CAATTTCTT TTAGAT TTTTCTGAT 32 RIL182_RS11240 intergenic 2398230 2398346 - down AAAGAAATTGTTAGATATGGCAATCCGTATAAGAAGAACAGGATTGTTGTCAGACGCAATAGGGATTGTGCGCATGGCGGACTGGTCTATTGTCAGAAATAAAAGGAGATGGATGC AAAATTATTATATCAGAAAAATCTAAAAGAAATTGTTAGATATGGCAATCCGTATAAGAAGAACAGGATTGTTGTCAGACGCAATAGGGATTGTGCGCATGGCGGACTGGTCTATTGTCAGAAATAAAAGGAGATGGATGCATGGCAAAGTATCTTGTTATTGTGG GCATCCATCTCCTTTTATTTCTGACAATAGACCAGTCCGCCATGCGCACAATCCCTATTGCGTCTGACAACAATCCTGTTCTTCTTATACGGATTGCCATATCTAACAATTTCTTTTAGAT 121 TTerm_0342 NZ_LR027880.1 2441277 2441290 14 2441297 2441310 14 6 92 0 23 75 25 76 23 0 2441293 TAGCTATCTATTAT ATAGTAGATAGCTA True CATTTACAT CAATTTTAT False True + TAGCTATCTATTAT TTTCAT ATAGTAGATAGCTA CAATTTTAT 54 RIL182_RS11460 intergenic 2441245 2441379 + down CTCTTTAAACATTGCAAAGATATCATTTACATAGCTATCTATTATTTTCATATAGTAGATAGCTACAATTTTATTTACAACTAACGCAGTGATGATTGTACAAAGATTATTAATTATAAAGTATTTCATATATT TCTCGACATATGTTGTCCTGATTAACTCTTTAAACATTGCAAAGATATCATTTACATAGCTATCTATTATTTTCATATAGTAGATAGCTACAATTTTATTTACAACTAACGCAGTGATGATTGTACAAAGATTATTAATTATAAAGTATTTCATATATTCACCTCATTTCCGTCGGTTTCTCGC CTCTTTAAACATTGCAAAGATATCATTTACATAGCTATCTATTATTTTCATATAGTAGATAGCTA 65 TTerm_0343 NZ_LR027880.1 2441277 2441290 14 2441297 2441310 14 6 92 0 23 75 25 76 23 0 2441293 TAGCTATCTATTAT ATAGTAGATAGCTA True CATTTACAT CAATTTTAT False True + TAGCTATCTATTAT TTTCAT ATAGTAGATAGCTA CAATTTTAT 54 RIL182_RS11465 intergenic 2441245 2441379 - down AATATATGAAATACTTTATAATTAATAATCTTTGTACAATCATCACTGCGTTAGTTGTAAATAAAATTGTAGCTATCTACTATATGAAAATAATAGATAGCTATGTAAATGATATCTTTGCAATGTTTAAAGAG GCGAGAAACCGACGGAAATGAGGTGAATATATGAAATACTTTATAATTAATAATCTTTGTACAATCATCACTGCGTTAGTTGTAAATAAAATTGTAGCTATCTACTATATGAAAATAATAGATAGCTATGTAAATGATATCTTTGCAATGTTTAAAGAGTTAATCAGGACAACATATGTCGAGA CTCTTTAAACATTGCAAAGATATCATTTACATAGCTATCTATTATTTTCATATAGTAGATAGCTA 65 TTerm_0344 NZ_LR027880.1 2446065 2446072 8 2446080 2446087 8 7 100 0 16 100 0 100 0 0 2446075 AATTTTTT AAAAAATT True TTTATCTCA TTTAAACTA False True + AATTTTTT CATGTAA AAAAAATT TTTAAACTA 32 RIL182_RS11520 intergenic 2445899 2446158 - down GAATAAATTACAGATGTGAGGTAGCAAGTAACACAGGTAACATGCGATTTTCACTTTTTATATAGTTTAAAAATTTTTTTTACATGAAAAAATTGAGATAAAAAAATAATTTCTACGCGTAAAAAGATTGTTGTTACTTTGTTACCTTGTTACCAATCTCTGCAAGTATTGATTTTACTGAATTTGTTAGTAACAAAAGGTATCACAAGTTTACAAAAAGGATGTGATTTCTATTTTAAATAATGCACAACGTGAATGG AGCAGGAAGAGCTGCCATTTAAGTAGAATAAATTACAGATGTGAGGTAGCAAGTAACACAGGTAACATGCGATTTTCACTTTTTATATAGTTTAAAAATTTTTTTTACATGAAAAAATTGAGATAAAAAAATAATTTCTACGCGTAAAAAGATTGTTGTTACTTTGTTACCTTGTTACCAATCTCTGCAAGTATTGATTTTACTGAATTTGTTAGTAACAAAAGGTATCACAAGTTTACAAAAAGGATGTGATTTCTATTTTAAATAATGCACAACGTGAATGGTTGAATAAAAAGAAAGATTTTATCG CCATTCACGTTGTGCATTATTTAAAATAGAAATCACATCCTTTTTGTAAACTTGTGATACCTTTTGTTACTAACAAATTCAGTAAAATCAATACTTGCAGAGATTGGTAACAAGGTAACAAAGTAACAACAATCTTTTTACGCGTAGAAATTATTTTTTTATCTCAATTTTTTCATGTAAAAAAAATT 188 TTerm_0345 NZ_LR027880.1 2452312 2452317 6 2452323 2452328 6 5 100 0 12 33 66 33 66 0 2452319 GCCACA TGTGGC True TCCATCAAG GGTTTTCAT False True + GCCACA CCTCA TGTGGC GGTTTTCAT 56 RIL182_RS21280 intergenic 2452308 2452320 - down AAAAGCAAATGAAAACCGCCACATGAGGTGTGGCTTGATGGACAAGCAGGAAGGAGGAAGTG CAAGCCACACCTCATGTGGC 20 TTerm_0346 NZ_LR027880.1 2453256 2453263 8 2453268 2453275 8 4 87 0 11 56 43 57 42 0 2453265 TTCCCGTT AACGGAAA True AATCATCTT TGGTTTTCT False True + TTCCCGTT GTTA AACGGAAA TGGTTTTCT 46 RIL182_RS11570 intergenic 2453144 2453380 + down GCACATTAATTAAACTACGAAATCAATCTCAATATAAGAACAACTATTGCAACCACTAATGAAATAATTGAGATTAACGTCACTCTATTTAATGCTCTACTGTAATCATCTTTCCCGTTGTTAAACGGAAATGGTTTTCTCATATCTTTCTTCTCACTCTCCTTCCTATTGTTACCTTGAAATAATTTGTTTTGGATGTTACTCTTTATATGCCCGGCAAGAAACGGAGTAACATA TGCAATCAGTTTGATACTGCATTAGGCACATTAATTAAACTACGAAATCAATCTCAATATAAGAACAACTATTGCAACCACTAATGAAATAATTGAGATTAACGTCACTCTATTTAATGCTCTACTGTAATCATCTTTCCCGTTGTTAAACGGAAATGGTTTTCTCATATCTTTCTTCTCACTCTCCTTCCTATTGTTACCTTGAAATAATTTGTTTTGGATGTTACTCTTTATATGCCCGGCAAGAAACGGAGTAACATATGCTTGAAAAAGAAAAAACAAATTG GCACATTAATTAAACTACGAAATCAATCTCAATATAAGAACAACTATTGCAACCACTAATGAAATAATTGAGATTAACGTCACTCTATTTAATGCTCTACTGTAATCATCTTTCCCGTTGTTAAACGGAAA 131 TTerm_0347 NZ_LR027880.1 2467942 2467947 6 2467955 2467960 6 7 100 0 12 100 0 100 0 0 2467950 AAATTT AAATTT True AATCTTACA TATTTTTTC False True + AAATTT ATTCTAC AAATTT TATTTTTTC 24 RIL182_RS11675 intergenic 2467910 2468026 - down AAATTGCTGATGTCTTGGAGATAACTTTAGTAATGGTATTGACTAGTTATTTTTTATGAAAAAATAAAATTTGTAGAATAAATTTGTAAGATTAAGCGAATATGAGAGGAGCTTTT ATAAACTTTTTCCGTATATATATTAAAATTGCTGATGTCTTGGAGATAACTTTAGTAATGGTATTGACTAGTTATTTTTTATGAAAAAATAAAATTTGTAGAATAAATTTGTAAGATTAAGCGAATATGAGAGGAGCTTTTATGAGTAATCAATCATGGGTGTTTT AAAAGCTCCTCTCATATTCGCTTAATCTTACAAATTTATTCTACAAATTT 50 TTerm_0348 NZ_LR027880.1 2469605 2469610 6 2469617 2469622 6 6 100 0 12 83 16 83 16 0 2469613 ACTTTA TAAAGT True CAAATTTTA TTTGTTTTC False True + ACTTTA GCCAAT TAAAGT TTTGTTTTC 32 RIL182_RS11690 intergenic 2469498 2469616 - down ATTGGCTAAAGTAAAATTTGGGTATTTTAAATGCTGTTAAGGGTATTTGAACTTAAAGTGCTTGCGATTGTTTTGGAGAAATATTAAACTTCTATTAAAGTACATGGAGGAAAGCATA AAATTGCAAAGAAAACAAAACTTTAATTGGCTAAAGTAAAATTTGGGTATTTTAAATGCTGTTAAGGGTATTTGAACTTAAAGTGCTTGCGATTGTTTTGGAGAAATATTAAACTTCTATTAAAGTACATGGAGGAAAGCATATTGAAACTGCAACTATTGGAAAAAA TATGCTTTCCTCCATGTACTTTAATAGAAGTTTAATATTTCTCCAAAACAATCGCAAGCACTTTAAGTTCAAATACCCTTAACAGCATTTAAAATACCCAAATTTTACTTTAGCCAATTAAAGT 124 TTerm_0349 NZ_LR027880.1 2484294 2484299 6 2484305 2484310 6 5 100 0 12 66 33 66 33 0 2484301 TGTTGT ACAACA True AGCCGGCTT TTTTGCATT False True + TGTTGT CACAA ACAACA TTTTGCATT 40 RIL182_RS22170 intergenic 2484270 2484455 + down ACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACATTTTGCATTCTATTAGCATGAATAAAATACTGCGTACAATATGCCCCTCCGGCATTTGTACGCAGTATCCATATATTTCTCATCATACCACAACTTATTCAAATCAAACATTACACAGGCAGACCTGACACACCGGACAGAAACT ATTTGATCTGGGATGTGGCAAATAGACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACATTTTGCATTCTATTAGCATGAATAAAATACTGCGTACAATATGCCCCTCCGGCATTTGTACGCAGTATCCATATATTTCTCATCATACCACAACTTATTCAAATCAAACATTACACAGGCAGACCTGACACACCGGACAGAAACTTACATCGTTTCCATCAACCGGTCAA ACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACA 40 TTerm_0350 NZ_LR027880.1 2484294 2484299 6 2484305 2484310 6 5 100 0 12 66 33 66 33 0 2484301 TGTTGT ACAACA True AGCCGGCTT TTTTGCATT False True + TGTTGT CACAA ACAACA TTTTGCATT 40 RIL182_RS11750 intergenic 2484270 2484455 - down AGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTATTTTATTCATGCTAATAGAATGCAAAATGTTGTTTGTGACAACAAGCCGGCTTGCAGAACATGCAGT TTGACCGGTTGATGGAAACGATGTAAGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTATTTTATTCATGCTAATAGAATGCAAAATGTTGTTTGTGACAACAAGCCGGCTTGCAGAACATGCAGTCTATTTGCCACATCCCAGATCAAAT ACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACA 40 TTerm_0351 NZ_LR027880.1 2492463 2492474 12 2492480 2492491 12 5 91 0 19 45 54 45 54 0 2492476 GGAAGTTTTGGG CCCAAAGCTTCC True ATTAGCAGG TTTTATTCA False True + GGAAGTTTTGGG ACAAC CCCAAAGCTTCC TTTTATTCA 62 RIL182_RS11770 intergenic 2492441 2492636 + down GTATTCATTAAGTATTAGCAGGGAAGTTTTGGGACAACCCCAAAGCTTCCTTTTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTTTATTATTTTGGGACATAAAAAACGACAGACCGTACGATCTGCCGTTTTTTCATGACCATAGATTCCTGTCGAATCCATACCATCGATTCTTTTTTCCCCTGTAAT ACTGCTTGCATGTCTGCTCCGTTAAGTATTCATTAAGTATTAGCAGGGAAGTTTTGGGACAACCCCAAAGCTTCCTTTTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTTTATTATTTTGGGACATAAAAAACGACAGACCGTACGATCTGCCGTTTTTTCATGACCATAGATTCCTGTCGAATCCATACCATCGATTCTTTTTTCCCCTGTAATTACATCATTCCCATGCCCGGGTTAC GTATTCATTAAGTATTAGCAGGGAAGTTTTGGGACAACCCCAAAGCTTCC 50 TTerm_0352 NZ_LR027880.1 2492463 2492474 12 2492480 2492491 12 5 91 0 19 45 54 45 54 0 2492476 GGAAGTTTTGGG CCCAAAGCTTCC True ATTAGCAGG TTTTATTCA False True + GGAAGTTTTGGG ACAAC CCCAAAGCTTCC TTTTATTCA 62 RIL182_RS11775 intergenic 2492441 2492636 - down ATTACAGGGGAAAAAAGAATCGATGGTATGGATTCGACAGGAATCTATGGTCATGAAAAAACGGCAGATCGTACGGTCTGTCGTTTTTTATGTCCCAAAATAATAAAATGCACGCTCCGCGAACATTCTATTATCATGAATAAAAGGAAGCTTTGGGGTTGTCCCAAAACTTCCCTGCTAATACTTAATGAATAC GTAACCCGGGCATGGGAATGATGTAATTACAGGGGAAAAAAGAATCGATGGTATGGATTCGACAGGAATCTATGGTCATGAAAAAACGGCAGATCGTACGGTCTGTCGTTTTTTATGTCCCAAAATAATAAAATGCACGCTCCGCGAACATTCTATTATCATGAATAAAAGGAAGCTTTGGGGTTGTCCCAAAACTTCCCTGCTAATACTTAATGAATACTTAACGGAGCAGACATGCAAGCAGT GTATTCATTAAGTATTAGCAGGGAAGTTTTGGGACAACCCCAAAGCTTCC 50 TTerm_0353 NZ_LR027880.1 2494778 2494788 11 2494798 2494808 11 9 81 0 12 77 22 77 22 0 2494792 TATAAGTTCAC GTGATTTTATA True CGTTTTTTT CTTTTTTTA False True + TATAAGTTCAC TCATTTTCT GTGATTTTATA CTTTTTTTA 40 RIL182_RS11785 intergenic 2494587 2494815 - down AAAAAAGTATAAAATCACAGAAAATGAGTGAACTTATAAAAAAACGAGAAAAAGAGAGAAAAAATAAGAAAATATTGGAATAAATAATTATAAATAGAAATATATTTGGTTGCAGATTCAAATATAAAAATCTATTATATGAACCATAAGTTAGCACTCAAAAGAAATGAGTGCTAATAACTACTCAAAAGAAATAAAACAGATGATCATAAGCAGGAGGTAAGCAAC TAAAACAGTCTCCGTTGAAAAAATAAAAAAAGTATAAAATCACAGAAAATGAGTGAACTTATAAAAAAACGAGAAAAAGAGAGAAAAAATAAGAAAATATTGGAATAAATAATTATAAATAGAAATATATTTGGTTGCAGATTCAAATATAAAAATCTATTATATGAACCATAAGTTAGCACTCAAAAGAAATGAGTGCTAATAACTACTCAAAAGAAATAAAACAGATGATCATAAGCAGGAGGTAAGCAACATGAAATTAGTTCCATTAAGCGACA GTTGCTTACCTCCTGCTTATGATCATCTGTTTTATTTCTTTTGAGTAGTTATTAGCACTCATTTCTTTTGAGTGCTAACTTATGGTTCATATAATAGATTTTTATATTTGAATCTGCAACCAAATATATTTCTATTTATAATTATTTATTCCAATATTTTCTTATTTTTTCTCTCTTTTTCTCGTTTTTTTATAAGTTCACTCATTTTCTGTGATTTTATA 221 TTerm_0354 NZ_LR027880.1 2504824 2504829 6 2504834 2504839 6 4 100 0 12 83 16 83 16 0 2504831 TTCATA TATGAA True CCCGTTTTT CTTTTTTCT False True + TTCATA TATT TATGAA CTTTTTTCT 32 RIL182_RS11825 intergenic 2504646 2504847 - down GAAAAAAGTTCATAAATATATGAAAAAACGGGCAAATGATAAATTTTATCATTTGCCCGTTTTTTTATTGAAAATTGGAAAAATCAGGTATATAATCGTGAAAATGTCATAGAGAGGGCAGTTGATTTTGTAGAAAATAGTCAGATTCTGACCAAAAATGACAGCTAATACAAATAATTAAATCCACAGGAGGTACATAAG CCATGCGCACGCTCAATACGAAATAGAAAAAAGTTCATAAATATATGAAAAAACGGGCAAATGATAAATTTTATCATTTGCCCGTTTTTTTATTGAAAATTGGAAAAATCAGGTATATAATCGTGAAAATGTCATAGAGAGGGCAGTTGATTTTGTAGAAAATAGTCAGATTCTGACCAAAAATGACAGCTAATACAAATAATTAAATCCACAGGAGGTACATAAGATGTTAGATTGTTTGAAAGCGATTA CTTATGTACCTCCTGTGGATTTAATTATTTGTATTAGCTGTCATTTTTGGTCAGAATCTGACTATTTTCTACAAAATCAACTGCCCTCTCTATGACATTTTCACGATTATATACCTGATTTTTCCAATTTTCAATAAAAAAACGGGCAAATGATAAAATTTATCATTTGCCCGTTTTTTCATATATTTATGAA 193 TTerm_0355 NZ_LR027880.1 2508736 2508751 16 2508759 2508774 16 7 93 0 27 71 28 73 26 0 2508754 ATAAAAATGAGACCAC GTAGTCTCATTTTTAT True GGCAAAAAA ATAATAAAG True True + ATAAAAATGAGACCAC CTGTACA GTAGTCTCATTTTTAT ATAATAAAG 78 RIL182_RS11845 intergenic 2508662 2508824 - down ACAGATTCTGGTTAAGAAATTCTGGTTAATCAGAAAAATTACTTTATTATATAAAAATGAGACTACTGTACAGGTGGTCTCATTTTTATTTTTTGCCCGCCGTATCAGTGCACAATGACTGTGAGAAAGGAAAAAAATTTGTTATAATTATAAATTATAAAA TTGCACTTGGCAGTGTAAAGGGTTAACAGATTCTGGTTAAGAAATTCTGGTTAATCAGAAAAATTACTTTATTATATAAAAATGAGACTACTGTACAGGTGGTCTCATTTTTATTTTTTGCCCGCCGTATCAGTGCACAATGACTGTGAGAAAGGAAAAAAATTTGTTATAATTATAAATTATAAAAATGCTTAATGATCAGGATATCAGGA TTTTATAATTTATAATTATAACAAATTTTTTTCCTTTCTCACAGTCATTGTGCACTGATACGGCGGGCAAAAAATAAAAATGAGACCACCTGTACAGTAGTCTCATTTTTAT 112 TTerm_0356 NZ_LR027880.1 2518610 2518623 14 2518633 2518646 14 9 92 0 23 53 46 53 46 0 2518627 AAAACGCAGGAATC GATTCCCGCGTTTT True TCTTATAAA CCATTTTTC True True + AAAACGCAGGAATC CTCTCTGCA GATTCCCGCGTTTT CCATTTTTC 70 RIL182_RS11875 intergenic 2518387 2518679 - down ACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGT AAGGGCTGTTTGGATTTATGAAATAACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGTATGAAATACGGATATTTTGATGAAA ACTGCCCTCCATAATTATACTATTTCATTCCTGCTTTCTATTGCTATGATACCTTAACTATAAAGGTTATCTGAAAATAGTTATACAAAATATGTCCTTAAAATAACAGATTCATGACCTGTCCTTTGCAGATATACTATGGTCAAAAAAATTTTCAATATATCAGAAAATTACCGGATATTTTTGTGTGCTTTTTAATTTATAAGACGTAATTTCTTATAAAAAACGCAGGAATCCTCTCTGCAGATTCCCGCGTTTT 259 TTerm_0357 NZ_LR027880.1 2522582 2522599 18 2522609 2522626 18 9 72 0 11 75 25 76 23 0 2522603 TCTCATTAATTTTCATTT AAACGGATATTACAGAGA True ATATTTTTT CTTTTTTCA False True + TCTCATTAATTTTCATTT CATGGAAAA AAACGGATATTACAGAGA CTTTTTTCA 46 RIL182_RS11905 intergenic 2522478 2522747 - down AAAATTATAATACATAAAACGGATAGGATAGAGAAACTGCAATTTCATGTCAGACTGAAAGTCAAATGACTTGAAATTTTCATACTTTATTGTGCAATTTGACGATAAACTGTGAAAAAAGTCTCTGTAATATCCGTTTTTTTCCATGAAATGAAAATTAATGAGAAAAAATATCAATAATGTTATTGACATCTAATGAACGTTAGAATATACTAACCAACGTAAGAAATGAAAATCATTATCAATACAGTAGGAGAAAAGAGGAAGAA TACAATTACAGATAGAAGAACTGTAAAAATTATAATACATAAAACGGATAGGATAGAGAAACTGCAATTTCATGTCAGACTGAAAGTCAAATGACTTGAAATTTTCATACTTTATTGTGCAATTTGACGATAAACTGTGAAAAAAGTCTCTGTAATATCCGTTTTTTTCCATGAAATGAAAATTAATGAGAAAAAATATCAATAATGTTATTGACATCTAATGAACGTTAGAATATACTAACCAACGTAAGAAATGAAAATCATTATCAATACAGTAGGAGAAAAGAGGAAGAAATGATGCCGCTTACTATGTTAAACA TTCTTCCTCTTTTCTCCTACTGTATTGATAATGATTTTCATTTCTTACGTTGGTTAGTATATTCTAACGTTCATTAGATGTCAATAACATTATTGATATTTTTTCTCATTAATTTTCATTTCATGGAAAAAAACGGATATTACAGAGA 148 TTerm_0358 NZ_LR027880.1 2531196 2531203 8 2531213 2531220 8 9 87 0 11 43 56 42 57 0 2531207 CTTTCCTG CAGGACAG True ATCCTTTTC CGTTTTACT False True + CTTTCCTG CATCCATAC CAGGACAG CGTTTTACT 54 RIL182_RS11930 intergenic 2531053 2531225 - down AAACGCTGTCCTGGTATGGATGCAGGAAAGAAAAGGATGCCTGCATCCATATGGACCCGTTGCCATGGAAGGATAGCGCCATGGAAAGACAGGAGTATATGGATGCAGGCAGCATAAAAATGGAGGGCAGTGTGAAAAGTGGGATTTTTCACACGCAGGAATGGAGAGTCAT GAACCGTTACCTATAAAACAGAGTAAAACGCTGTCCTGGTATGGATGCAGGAAAGAAAAGGATGCCTGCATCCATATGGACCCGTTGCCATGGAAGGATAGCGCCATGGAAAGACAGGAGTATATGGATGCAGGCAGCATAAAAATGGAGGGCAGTGTGAAAAGTGGGATTTTTCACACGCAGGAATGGAGAGTCATATGAGTAAAAATAATACGACAGTGA ATGACTCTCCATTCCTGCGTGTGAAAAATCCCACTTTTCACACTGCCCTCCATTTTTATGCTGCCTGCATCCATATACTCCTGTCTTTCCATGGCGCTATCCTTCCATGGCAACGGGTCCATATGGATGCAGGCATCCTTTTCTTTCCTGCATCCATACCAGGACAG 167 TTerm_0359 NZ_LR027880.1 2554988 2555003 16 2555009 2555024 16 5 93 0 27 46 53 46 53 0 2555005 GAAAAGACGCAGATCC GGATCTGCGCCTTTTC True ATAAAGTAG ATTTCTAAT True True + GAAAAGACGCAGATCC TTACC GGATCTGCGCCTTTTC ATTTCTAAT 78 RIL182_RS12030 intergenic 2554819 2555073 - down AAACAAAACAATAGATCAACGCTTTGCGGGCAGATCTATGATTAGAAATGAAAAGGCGCAGATCCGGTAAGGATCTGCGTCTTTTCTACTTTATGGAAACCGTTTTTTCTTGACAAGCACTTATATATTAGGTTAGACTAACGGGGCAAAGTTAGTTCAGCCTAATAGAAAGAAACAACGGATGGGATACTTTGCGGACAGAAATGTTGTCAGGAATAAAAGCAGAGAGGGCAGATTTGAAAAGATAAGCGGAT TTTCACAGTGTGTGAAGACAGTGTAAAACAAAACAATAGATCAACGCTTTGCGGGCAGATCTATGATTAGAAATGAAAAGGCGCAGATCCGGTAAGGATCTGCGTCTTTTCTACTTTATGGAAACCGTTTTTTCTTGACAAGCACTTATATATTAGGTTAGACTAACGGGGCAAAGTTAGTTCAGCCTAATAGAAAGAAACAACGGATGGGATACTTTGCGGACAGAAATGTTGTCAGGAATAAAAGCAGAGAGGGCAGATTTGAAAAGATAAGCGGATATGAAAACAGAAACAAAAAAGATAC ATCCGCTTATCTTTTCAAATCTGCCCTCTCTGCTTTTATTCCTGACAACATTTCTGTCCGCAAAGTATCCCATCCGTTGTTTCTTTCTATTAGGCTGAACTAACTTTGCCCCGTTAGTCTAACCTAATATATAAGTGCTTGTCAAGAAAAAACGGTTTCCATAAAGTAGAAAAGACGCAGATCCTTACCGGATCTGCGCCTTTTC 205 TTerm_0360 NZ_LR027880.1 2559304 2559315 12 2559322 2559333 12 6 91 0 19 62 37 63 36 0 2559318 AAAAAACACCCG CGGATGTTTTTT True GGTAAACAA GAAATAATT True True + AAAAAACACCCG TTTTTT CGGATGTTTTTT GAAATAATT 70 RIL182_RS12055 intergenic 2559071 2559394 - down AAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAA ATAAAGAATGTGCTTATCGAAGATAAAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAAATGAGAAAGAGAATATTGGGCGCGG TTTGCTCCTTTCCTCAAGAATGATACATATATGTCAACATGACGAATGCCGTCATTTGATACAGGCACATATCATACTTAGGTTATATCCAAAAGTCAAATTTTTTATACATGTTTTCCCGAAAAAAAATTTGCTTATTTTTACTCAATTTTTTGATATGTGTCCTGTTTTTTATCAGCCATTCATCCATCCGAAATTATGTTCGAATAAAGTAGAACTGACCAGGTAAACAAAAAAACACCCGTTTTTTCGGATGTTTTTT 262 TTerm_0361 NZ_LR027880.1 2572838 2572847 10 2572855 2572864 10 7 90 0 15 80 20 77 22 0 2572850 AAGTTTTGAA TTCATAACTT True TGGGTACGA TTCTCACTT False True + AAGTTTTGAA TAAATAT TTCATAACTT TTCTCACTT 38 RIL182_RS12115 intergenic 2572737 2572964 - down AAAAACAAATAAGAAAGAAAGCAACGCGCTAGGACAGTTATGAATCAAGCAGTTTGTAGCTGGCTGTTTGCTTTTTAGATTTAATTTCCAAAAGTGAGAAAAGTTATGAAATATTTATTCAAAACTTCGTACCCAGCATGTTATAATTGATGTAGTTGAATATGAAGGCTACAGAAAGGTTACTCACCGTGAGGAGATTTTATATTTATAATGAGGAGAAAAGGATT AAAGAAATGACAAGTATGTATATTAAAAAACAAATAAGAAAGAAAGCAACGCGCTAGGACAGTTATGAATCAAGCAGTTTGTAGCTGGCTGTTTGCTTTTTAGATTTAATTTCCAAAAGTGAGAAAAGTTATGAAATATTTATTCAAAACTTCGTACCCAGCATGTTATAATTGATGTAGTTGAATATGAAGGCTACAGAAAGGTTACTCACCGTGAGGAGATTTTATATTTATAATGAGGAGAAAAGGATTATGATTAAATTAGAGAAAAAGAAAA AATCCTTTTCTCCTCATTATAAATATAAAATCTCCTCACGGTGAGTAACCTTTCTGTAGCCTTCATATTCAACTACATCAATTATAACATGCTGGGTACGAAGTTTTGAATAAATATTTCATAACTT 127 TTerm_0362 NZ_LR027880.1 2588825 2588832 8 2588841 2588848 8 8 87 0 11 56 43 57 42 0 2588836 TTGCACCA TGATGCAA True ATGGTCGAT CACCTTTTG False True + TTGCACCA GCTATCGG TGATGCAA CACCTTTTG 46 RIL182_RS22325 intergenic 2588538 2588915 - down GAACTTTCGGAACGTCACGGTGTGAAAATGCAGCAGATCGCGCTTGCATGGCACTGGGCAAAAGGTGTTGCATCACCGATAGCTGGTGCAATCGACCATAATCCGGCGGAGGGTGTGATGCTTTTGGATGAGAAGAAATGATGATGTATAGGATTTTGTTTAGTTTCACATATAAAAAAGCAAAAAAATATCTACATACTGTACAAAAATATCAAGAAAATATTAATAAAATCTAAAAAATGTTAAGAATGTGCTAACAATACAAAAATAATACGGTTTTCTTTGTACAAGATTCTGCCTATAATTAAATCATAAAGTTGCAGCGGCAAAGAGGGGCAGCGCAGCAAACAAATTAACCAATTACAGGAGGGTTTCTT ACAGATTATCGTCACAAGAGTGCATGAACTTTCGGAACGTCACGGTGTGAAAATGCAGCAGATCGCGCTTGCATGGCACTGGGCAAAAGGTGTTGCATCACCGATAGCTGGTGCAATCGACCATAATCCGGCGGAGGGTGTGATGCTTTTGGATGAGAAGAAATGATGATGTATAGGATTTTGTTTAGTTTCACATATAAAAAAGCAAAAAAATATCTACATACTGTACAAAAATATCAAGAAAATATTAATAAAATCTAAAAAATGTTAAGAATGTGCTAACAATACAAAAATAATACGGTTTTCTTTGTACAAGATTCTGCCTATAATTAAATCATAAAGTTGCAGCGGCAAAGAGGGGCAGCGCAGCAAACAAATTAACCAATTACAGGAGGGTTTCTTATGAAGAAAAAAGTTTTATCCGCAA AAGAAACCCTCCTGTAATTGGTTAATTTGTTTGCTGCGCTGCCCCTCTTTGCCGCTGCAACTTTATGATTTAATTATAGGCAGAATCTTGTACAAAGAAAACCGTATTATTTTTGTATTGTTAGCACATTCTTAACATTTTTTAGATTTTATTAATATTTTCTTGATATTTTTGTACAGTATGTAGATATTTTTTTGCTTTTTTATATGTGAAACTAAACAAAATCCTATACATCATCATTTCTTCTCATCCAAAAGCATCACACCCTCCGCCGGATTATGGTCGATTGCACCAGCTATCGGTGATGCAA 310 TTerm_0363 NZ_LR027880.1 2594597 2594618 22 2594623 2594644 22 4 86 0 29 72 27 73 26 0 2594620 AAAAATAGATGTACCTGCATCT AGATGATAGTACATCTATTTTT True AGCATACAA GTGTGTCAA True True + AAAAATAGATGTACCTGCATCT AACC AGATGATAGTACATCTATTTTT GTGTGTCAA 74 RIL182_RS21300 intergenic 2594529 2594721 - down AGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCA ATAGAAAAATCTGGAGTGAGAAGTAAGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCAATGGACGAGTCAGGAAGAAAAATCA TGCGATCTCCACTCCTAACCAACTCTGAAAATTAAAATCTAACTTATGACTTTCCAATTAGCATACAAAAAATAGATGTACCTGCATCTAACCAGATGATAGTACATCTATTTTT 115 TTerm_0364 NZ_LR027880.1 2629810 2629835 26 2629841 2629867 27 5 88 3 32 49 50 45 54 0 2629837 CATAAAAAGACAGGGCGCGGAAGTCA TGGCTTCCGCGCCCTGTTCTTTTTTTG True ACAGCACCC CCTATCTGA True True + CATAAAAAGACAGGGCGCGGAAGTCA TATAC TGGCTTCCGCGCCCTGTTCTTTTTTTG CCTATCTGA 88 RIL182_RS12375 intergenic 2629691 2629869 + down GCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTGCC AAGACGCGCCCCTGTTACGCAGTAGGCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTGCCTATCTGACATTTCCCTTTTCCATTT GCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTG 176 TTerm_0365 NZ_LR027880.1 2629810 2629835 26 2629841 2629867 27 5 88 3 32 49 50 45 54 0 2629837 CATAAAAAGACAGGGCGCGGAAGTCA TGGCTTCCGCGCCCTGTTCTTTTTTTG True ACAGCACCC CCTATCTGA True True + CATAAAAAGACAGGGCGCGGAAGTCA TATAC TGGCTTCCGCGCCCTGTTCTTTTTTTG CCTATCTGA 88 RIL182_RS12380 intergenic 2629691 2629869 - down GGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTATGGGTGCTGTTTTCGTGAATGTTACGCAGTAGAACGCCATTTTTGGGGGTAAAGGTATAAAGTATCGCCTATCCGATTTTCACGCCCGGAAAGCCCTGTAAATCAAGGGATTTTCCGCGC AAATGGAAAAGGGAAATGTCAGATAGGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTATGGGTGCTGTTTTCGTGAATGTTACGCAGTAGAACGCCATTTTTGGGGGTAAAGGTATAAAGTATCGCCTATCCGATTTTCACGCCCGGAAAGCCCTGTAAATCAAGGGATTTTCCGCGCCTACTGCGTAACAGGGGCGCGTCTT GCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTG 176 TTerm_0366 NZ_LR027880.1 2634023 2634041 19 2634049 2634066 18 7 84 5 16 54 45 56 43 0 2634044 AGAGCCGATAATATGCAGT ACTGCTGTTATCGCCTCT True ACAGACGCA TTTTTGATT False True + AGAGCCGATAATATGCAGT TTGAAAT ACTGCTGTTATCGCCTCT TTTTTGATT 56 RIL182_RS12405 intergenic 2633992 2634529 + down TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATG TAAAGCCAAAAAACAACAAAAATAATTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATGTGGAACCTAATCGCAGGGAGTTTAT TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCT 74 TTerm_0367 NZ_LR027880.1 2634372 2634384 13 2634392 2634404 13 7 92 0 21 42 57 41 58 0 2634387 ATACGTCTGTCCG CGGACAGGCGTAT True CAATACCTA TTTGCTGCT False True + ATACGTCTGTCCG GGCTTTT CGGACAGGCGTAT TTTGCTGCT 74 RIL182_RS12405 intergenic 2633992 2634529 + down TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATG TAAAGCCAAAAAACAACAAAAATAATTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATGTGGAACCTAATCGCAGGGAGTTTAT TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTAT 412 TTerm_0368 NZ_LR027880.1 2634423 2634440 18 2634445 2634463 19 4 89 5 21 72 27 76 23 0 2634442 TTTTGAAAAAAATCCGAA TTCGGCGTTTTTTTCAAAA True AAAAAATTT GGCAGTATT True True + TTTTGAAAAAAATCCGAA AATC TTCGGCGTTTTTTTCAAAA GGCAGTATT 74 RIL182_RS12405 intergenic 2633992 2634529 + down TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATG TAAAGCCAAAAAACAACAAAAATAATTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATGTGGAACCTAATCGCAGGGAGTTTAT TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAA 471 TTerm_0369 NZ_LR027880.1 2643033 2643040 8 2643049 2643056 8 8 87 0 11 93 6 100 0 0 2643044 ATCAAAAT ATTTTAAT True AATCTTTCA ATCATTTTG False True + ATCAAAAT CACCCCCT ATTTTAAT ATCATTTTG 22 RIL182_RS12500 intergenic 2643034 2643523 - down ATGATACGTTATATTGCAAGAGTGTGTATGCTTGGACTCCGATAGGAGAAAGCAGATTGGTTCTGATTGACAGAAGAATCATATGATTTCATCATTAATTTGGCAGGCAATAATATTCAAATTATTGCCTGCTAAATTTTTACCAAAATTCTTCTAATACCGTTTTTAGACTAGGAAATATTGTTGAAAGCGTACTCTCAATATATTCTTTAGAGCAGAACTGTAGCTTTGAAATAGTATCAATGCTGTGTTTTTTACTTGATTTCTGAGTAATTTTTGTTCTGTTGGTCATTTTCTGCAAAAACAGGTCACTTTCTGCATAGGATATTTTCTTTTGCTTTGATTCCTGCTATTCTTAGAATATACAACAGATTGCTCTATATGGCACATTGAATACTGAGGAAAGGAGAAGTAAATATAATTATGAATATGCTTATAGAATGATCTGCATATAACGACAAAATGATATTAAAATAGGGGGTGATTTTG TACAGAAAGCACAGGCTCGGAGCTGATGATACGTTATATTGCAAGAGTGTGTATGCTTGGACTCCGATAGGAGAAAGCAGATTGGTTCTGATTGACAGAAGAATCATATGATTTCATCATTAATTTGGCAGGCAATAATATTCAAATTATTGCCTGCTAAATTTTTACCAAAATTCTTCTAATACCGTTTTTAGACTAGGAAATATTGTTGAAAGCGTACTCTCAATATATTCTTTAGAGCAGAACTGTAGCTTTGAAATAGTATCAATGCTGTGTTTTTTACTTGATTTCTGAGTAATTTTTGTTCTGTTGGTCATTTTCTGCAAAAACAGGTCACTTTCTGCATAGGATATTTTCTTTTGCTTTGATTCCTGCTATTCTTAGAATATACAACAGATTGCTCTATATGGCACATTGAATACTGAGGAAAGGAGAAGTAAATATAATTATGAATATGCTTATAGAATGATCTGCATATAACGACAAAATGATATTAAAATAGGGGGTGATTTTGATGAAAGATTTTCATTTGAAGATTT CAAAATCACCCCCTATTTTAAT 22 TTerm_0370 NZ_LR027880.1 2664478 2664492 15 2664497 2664511 15 4 93 0 25 36 63 35 64 0 2664494 ACGCCCGTATCAGCA TGCCGATACGGGCGT True AAAAGGCTA TTTTAAAAA True True + ACGCCCGTATCAGCA GTAA TGCCGATACGGGCGT TTTTAAAAA 82 RIL182_RS12635 intergenic 2664439 2664545 + down CCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGTTTTTAAAAAGGTGAATTTTTATAATATTACTCAT GATTCTCAGAGAGGATAGTATCTGACCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGTTTTTAAAAAGGTGAATTTTTATAATATTACTCATCATTTGAGCAAATAAAGCAAATCGC CCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGT 72 TTerm_0371 NZ_LR027880.1 2664478 2664492 15 2664497 2664511 15 4 93 0 25 36 63 35 64 0 2664494 ACGCCCGTATCAGCA TGCCGATACGGGCGT True AAAAGGCTA TTTTAAAAA True True + ACGCCCGTATCAGCA GTAA TGCCGATACGGGCGT TTTTAAAAA 82 RIL182_RS22060 intergenic 2664439 2664545 - down ATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCGTAGCCTTTTTCTGCCAGAGGGAAGATTACAAATTTGAGG GCGATTTGCTTTATTTGCTCAAATGATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCGTAGCCTTTTTCTGCCAGAGGGAAGATTACAAATTTGAGGTCAGATACTATCCTCTCTGAGAATC CCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGT 72 TTerm_0372 NZ_LR027880.1 2680765 2680772 8 2680781 2680788 8 8 100 0 16 37 62 37 62 0 2680776 CAGAGAGG CCTCTCTG True TCCTGTCCC CCAATTTTC False True + CAGAGAGG ACTTTCGC CCTCTCTG CCAATTTTC 64 RIL182_RS12710 intergenic 2680749 2680797 - down GAAAATTGGCAGAGAGGGCGAAAGTCCTCTCTGGGACAGGAGGTAAGA AGATTGTAGTAATTGGCAGACCATAGAAAATTGGCAGAGAGGGCGAAAGTCCTCTCTGGGACAGGAGGTAAGAATGGATTTAAAGGATATGATTCTTG TCTTACCTCCTGTCCCAGAGAGGACTTTCGCCCTCTCTG 39 TTerm_0373 NZ_LR027880.1 2682717 2682725 9 2682735 2682743 9 9 88 0 13 50 50 50 50 0 2682729 GTGAATGAC GTCATCCAC True TTCTTAGTG TTTTTTTAT False True + GTGAATGAC CATAGGCTT GTCATCCAC TTTTTTTAT 50 RIL182_RS12715 intergenic 2682728 2682843 - down GAATTGCAATGTATCAGCCATTTGGACTAAGTTCCGGATGGCTACTTTTTACCTTTTTTAAGGATACAGAAAGAAGGTGGGAACATTGAAGATAAAAAAAGTGGATGACAAGCCT AAAGGGAGGCAAAATTTGCTGATTAGAATTGCAATGTATCAGCCATTTGGACTAAGTTCCGGATGGCTACTTTTTACCTTTTTTAAGGATACAGAAAGAAGGTGGGAACATTGAAGATAAAAAAAGTGGATGACAAGCCTATGGTCATTCACACTAAGAAAAAAG AGGCTTGTCATCCAC 15 TTerm_0374 NZ_LR027880.1 2687225 2687234 10 2687243 2687252 10 8 90 0 15 55 45 55 44 0 2687238 AAGGAATCTG CAGGTTCCTT True CCTCATTTA TTTAGTGCA False True + AAGGAATCTG TTTTTATG CAGGTTCCTT TTTAGTGCA 54 RIL182_RS12735 intergenic 2687226 2687254 + down GGAATCTGTTTTTATGCAGGTTCCTTTT TCGACAGGGATTTTCCCTCATTTAAGGAATCTGTTTTTATGCAGGTTCCTTTTTAGTGCATTGCTTTATAAGCAGCCA GGAATCTGTTTTTATGCAGGTTCCTT 26 TTerm_0375 NZ_LR027880.1 2687225 2687234 10 2687243 2687252 10 8 90 0 15 55 45 55 44 0 2687238 AAGGAATCTG CAGGTTCCTT True CCTCATTTA TTTAGTGCA False True + AAGGAATCTG TTTTTATG CAGGTTCCTT TTTAGTGCA 54 RIL182_RS12740 intergenic 2687226 2687254 - down AAAAGGAACCTGCATAAAAACAGATTCC TGGCTGCTTATAAAGCAATGCACTAAAAAGGAACCTGCATAAAAACAGATTCCTTAAATGAGGGAAAATCCCTGTCGA GGAATCTGTTTTTATGCAGGTTCCTT 26 TTerm_0376 NZ_LR027880.1 2719051 2719065 15 2719072 2719086 15 6 93 0 25 60 40 57 42 0 2719068 AATAGGTTGACACAC GTGTGACAACCTATT True TTTTGCATA TTTATATTT False True + AATAGGTTGACACAC CAAATC GTGTGACAACCTATT TTTATATTT 74 RIL182_RS12940 intergenic 2719027 2719116 - down ATGTGTAAATTGTAACTAAGAAAATATAAAAATAGGTTGTCACACGATTTGGTGTGTCAACCTATTATGCAAAATACAGGAGGGTTAAA CATATACTATGTATCATCCGTTTTAATGTGTAAATTGTAACTAAGAAAATATAAAAATAGGTTGTCACACGATTTGGTGTGTCAACCTATTATGCAAAATACAGGAGGGTTAAAATGAAGATAGCTACCCAACATTATC TTTAACCCTCCTGTATTTTGCATAATAGGTTGACACACCAAATCGTGTGACAACCTATT 59 TTerm_0377 NZ_LR027880.1 2720967 2720974 8 2720979 2720986 8 4 87 0 11 62 37 57 42 0 2720976 GGAAACAA TTGTTACC True TTTTTATTG TTTTTCCAC False True + GGAAACAA TTTT TTGTTACC TTTTTCCAC 30 RIL182_RS12955 intergenic 2720765 2721012 - down GGAACTATTGCTAAAGAGTGGAAAAAGGTAACAAAAAATTGTTTCCAATAAAAAATTATCGTTGTGTTGGAACAAACATACTTGTATAGACGAGAAGTTTTGAAATCGCTTTACAGGAGGGGCATAATACTTGGTTGTGTTATGTTAGAGACAGATAGGGTTTACATTAGTTACATGGCAATAGCTGTTATATTATGTGCAGCTTTGCTGTGTATAGCAAAAATTTTTAAACAGGAGGTGAGAGAGA AATGCAAATTAGAAAAAATATGGTAGGAACTATTGCTAAAGAGTGGAAAAAGGTAACAAAAAATTGTTTCCAATAAAAAATTATCGTTGTGTTGGAACAAACATACTTGTATAGACGAGAAGTTTTGAAATCGCTTTACAGGAGGGGCATAATACTTGGTTGTGTTATGTTAGAGACAGATAGGGTTTACATTAGTTACATGGCAATAGCTGTTATATTATGTGCAGCTTTGCTGTGTATAGCAAAAATTTTTAAACAGGAGGTGAGAGAGAATGAAGCAGGTTAATAAGAAAGTGT TCTCTCTCACCTCCTGTTTAAAAATTTTTGCTATACACAGCAAAGCTGCACATAATATAACAGCTATTGCCATGTAACTAATGTAAACCCTATCTGTCTCTAACATAACACAACCAAGTATTATGCCCCTCCTGTAAAGCGATTTCAAAACTTCTCGTCTATACAAGTATGTTTGTTCCAACACAACGATAATTTTTTATTGGAAACAATTTTTTGTTACC 221 TTerm_0378 NZ_LR027880.1 2730699 2730704 6 2730709 2730714 6 4 100 0 12 66 33 66 33 0 2730706 GACATA TATGTC True TTAATTTTG CTCCTTTTC False True + GACATA TATG TATGTC CTCCTTTTC 40 RIL182_RS13030 intergenic 2730703 2730807 - down AATGCAAAGCGTTACACTTAAATGTCAATCTGTTACACTTTGACGGATTTTCCCATAAAGTATGATATAGTGCATTCATCAAATGAAAAGGAGGACATACATAT TCTATGGAATTGAAGTGAAGGAATAAATGCAAAGCGTTACACTTAAATGTCAATCTGTTACACTTTGACGGATTTTCCCATAAAGTATGATATAGTGCATTCATCAAATGAAAAGGAGGACATACATATATGTCAAAATTAAGAAGATTGATGA ATATGTATGTC 11 TTerm_0379 NZ_LR027880.1 2748404 2748417 14 2748422 2748435 14 4 78 0 13 60 39 63 36 0 2748419 AAAAGGTACTCGCT AGCGTTTACGTTTT True TCATGCAAA CCAAGCAAG True True + AAAAGGTACTCGCT ATAG AGCGTTTACGTTTT CCAAGCAAG 50 RIL182_RS13135 intergenic 2748305 2748547 + down CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACT AATTTATCGTGAAAACAAAGTGTAGCACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACTTAACAAGTAACACACCTTTCGGTGT CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTT 130 TTerm_0380 NZ_LR027880.1 2748404 2748417 14 2748422 2748435 14 4 78 0 13 60 39 63 36 0 2748419 AAAAGGTACTCGCT AGCGTTTACGTTTT True TCATGCAAA CCAAGCAAG True True + AAAAGGTACTCGCT ATAG AGCGTTTACGTTTT CCAAGCAAG 50 RIL182_RS13140 intergenic 2748305 2748547 - down AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTG ACACCGAAAGGTGTGTTACTTGTTAAGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTGCTACACTTTGTTTTCACGATAAATT CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTT 130 TTerm_0381 NZ_LR027880.1 2748467 2748478 12 2748484 2748495 12 5 100 0 24 75 25 75 25 0 2748480 GAAAATTTCTCA TGAGAAATTTTC True GAGTAGGAG GACCTCTCA True True + GAAAATTTCTCA AAAAA TGAGAAATTTTC GACCTCTCA 64 RIL182_RS13135 intergenic 2748305 2748547 + down CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACT AATTTATCGTGAAAACAAAGTGTAGCACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACTTAACAAGTAACACACCTTTCGGTGT CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTC 190 TTerm_0382 NZ_LR027880.1 2748467 2748478 12 2748484 2748495 12 5 100 0 24 75 25 75 25 0 2748480 GAAAATTTCTCA TGAGAAATTTTC True GAGTAGGAG GACCTCTCA True True + GAAAATTTCTCA AAAAA TGAGAAATTTTC GACCTCTCA 64 RIL182_RS13140 intergenic 2748305 2748547 - down AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTG ACACCGAAAGGTGTGTTACTTGTTAAGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTGCTACACTTTGTTTTCACGATAAATT CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTC 190 TTerm_0383 NZ_LR027880.1 2770396 2770408 13 2770413 2770425 13 4 92 0 21 42 57 41 58 0 2770410 AGAAAGGCTCTGC GCAGAGCCCTTCT True TTAGATTAA AACATTTTC False True + AGAAAGGCTCTGC ATAA GCAGAGCCCTTCT AACATTTTC 74 RIL182_RS13235 intergenic 2770367 2770620 - down ATTCTTTATGAAGTCATGAATTTTGGATTGACATATTTTCATATGACAGGTAATATAATATTAAAGACAGGCAACTTGAGTGTCTGCCAAGCGGCAAAGTAAGGTGTTGTGCCAGAGAGCAGTGCCTTATGAGCTTTATAAGGGTTTGACATTTACCACAATCTGGCTAGAGGTTAATCCTCGAAAGAAAATGTTAGAAGGGCTCTGCTTATGCAGAGCCTTTCTTAATCTAAGGATGTAGTGGAGAACTGTA AAAAGCATGCAAATGAAAAATGTTAATTCTTTATGAAGTCATGAATTTTGGATTGACATATTTTCATATGACAGGTAATATAATATTAAAGACAGGCAACTTGAGTGTCTGCCAAGCGGCAAAGTAAGGTGTTGTGCCAGAGAGCAGTGCCTTATGAGCTTTATAAGGGTTTGACATTTACCACAATCTGGCTAGAGGTTAATCCTCGAAAGAAAATGTTAGAAGGGCTCTGCTTATGCAGAGCCTTTCTTAATCTAAGGATGTAGTGGAGAACTGTAATGAGGAATGTTTTAGATTGCATAA TACAGTTCTCCACTACATCCTTAGATTAAGAAAGGCTCTGCATAAGCAGAGCCCTTCT 58 TTerm_0384 NZ_LR027880.1 2785116 2785122 7 2785130 2785136 7 7 100 0 14 14 85 14 85 0 2785125 TGGGGGC GCCCCCA True TGCTACTTT TTTTGTTAT False True + TGGGGGC GCTTTCT GCCCCCA TTTTGTTAT 76 RIL182_RS13315 intergenic 2784922 2785316 - down AGAAACCGGATTTTGATGTGTGGGGGCAGAAAGCGCCCCCAAAACAGCAAAGTGGGGGCAGAAAGCGCCCCCAAAATGTCAAAGTGGGGGCAAAAAGTGCCCCCGCAATTTGGACACGACAAAATCCGGACTGAAGTAAAAATAAAAGTGGGGGCAGAAAGCGCCCCCAAAATAACAAAATGGGGGCAGAAAGCGCCCCCAAAGTAGCAAAGTGGGGGCAAAAAGCGCCCCCACTTTCATAAACAGAGGGTTTTAGGGAGATTTTCTCCCTAACTAGATGGCATTAGGACAGAGATGTCTCTAATGCGTATCTAGCCGTAAACCTAAGAGATTCAGACAGGCGTGTGGGTGGAAGAGATATACAAAACACGGATAAGGGAGGTGCAGGAAAGCA GAGCAGATGAACCAGTCAGGGCATGAGAAACCGGATTTTGATGTGTGGGGGCAGAAAGCGCCCCCAAAACAGCAAAGTGGGGGCAGAAAGCGCCCCCAAAATGTCAAAGTGGGGGCAAAAAGTGCCCCCGCAATTTGGACACGACAAAATCCGGACTGAAGTAAAAATAAAAGTGGGGGCAGAAAGCGCCCCCAAAATAACAAAATGGGGGCAGAAAGCGCCCCCAAAGTAGCAAAGTGGGGGCAAAAAGCGCCCCCACTTTCATAAACAGAGGGTTTTAGGGAGATTTTCTCCCTAACTAGATGGCATTAGGACAGAGATGTCTCTAATGCGTATCTAGCCGTAAACCTAAGAGATTCAGACAGGCGTGTGGGTGGAAGAGATATACAAAACACGGATAAGGGAGGTGCAGGAAAGCAATGGATAAAGAACTTACAATAATCG TGCTTTCCTGCACCTCCCTTATCCGTGTTTTGTATATCTCTTCCACCCACACGCCTGTCTGAATCTCTTAGGTTTACGGCTAGATACGCATTAGAGACATCTCTGTCCTAATGCCATCTAGTTAGGGAGAAAATCTCCCTAAAACCCTCTGTTTATGAAAGTGGGGGCGCTTTTTGCCCCCACTTTGCTACTTTGGGGGCGCTTTCTGCCCCCA 214 TTerm_0385 NZ_LR027880.1 2785148 2785154 7 2785162 2785168 7 7 100 0 14 14 85 14 85 0 2785157 TGGGGGC GCCCCCA True TGTTATTTT CTTTTATTT False True + TGGGGGC GCTTTCT GCCCCCA CTTTTATTT 76 RIL182_RS13315 intergenic 2784922 2785316 - down AGAAACCGGATTTTGATGTGTGGGGGCAGAAAGCGCCCCCAAAACAGCAAAGTGGGGGCAGAAAGCGCCCCCAAAATGTCAAAGTGGGGGCAAAAAGTGCCCCCGCAATTTGGACACGACAAAATCCGGACTGAAGTAAAAATAAAAGTGGGGGCAGAAAGCGCCCCCAAAATAACAAAATGGGGGCAGAAAGCGCCCCCAAAGTAGCAAAGTGGGGGCAAAAAGCGCCCCCACTTTCATAAACAGAGGGTTTTAGGGAGATTTTCTCCCTAACTAGATGGCATTAGGACAGAGATGTCTCTAATGCGTATCTAGCCGTAAACCTAAGAGATTCAGACAGGCGTGTGGGTGGAAGAGATATACAAAACACGGATAAGGGAGGTGCAGGAAAGCA GAGCAGATGAACCAGTCAGGGCATGAGAAACCGGATTTTGATGTGTGGGGGCAGAAAGCGCCCCCAAAACAGCAAAGTGGGGGCAGAAAGCGCCCCCAAAATGTCAAAGTGGGGGCAAAAAGTGCCCCCGCAATTTGGACACGACAAAATCCGGACTGAAGTAAAAATAAAAGTGGGGGCAGAAAGCGCCCCCAAAATAACAAAATGGGGGCAGAAAGCGCCCCCAAAGTAGCAAAGTGGGGGCAAAAAGCGCCCCCACTTTCATAAACAGAGGGTTTTAGGGAGATTTTCTCCCTAACTAGATGGCATTAGGACAGAGATGTCTCTAATGCGTATCTAGCCGTAAACCTAAGAGATTCAGACAGGCGTGTGGGTGGAAGAGATATACAAAACACGGATAAGGGAGGTGCAGGAAAGCAATGGATAAAGAACTTACAATAATCG TGCTTTCCTGCACCTCCCTTATCCGTGTTTTGTATATCTCTTCCACCCACACGCCTGTCTGAATCTCTTAGGTTTACGGCTAGATACGCATTAGAGACATCTCTGTCCTAATGCCATCTAGTTAGGGAGAAAATCTCCCTAAAACCCTCTGTTTATGAAAGTGGGGGCGCTTTTTGCCCCCACTTTGCTACTTTGGGGGCGCTTTCTGCCCCCATTTTGTTATTTTGGGGGCGCTTTCTGCCCCCA 246 TTerm_0386 NZ_LR027880.1 2790267 2790273 7 2790278 2790284 7 4 100 0 14 85 14 85 14 0 2790275 ATTTAGT ACTAAAT True AAGTGCTAA GTTTTTGAT False True + ATTTAGT CCTC ACTAAAT GTTTTTGAT 36 RIL182_RS13355 intergenic 2790200 2790490 - down AGTTATAATAGGACCAAGTTAGATGAAACCCAGTAAAATCAAGGGGTTATGCCTAATTTAGTCCTTATTTTTATACCATTTTAGCGGTAAAGATAGGGCAGCGCTGCAATATTAAACCGAAAATCCAAGTCAGTATCACAGATGTCCGCAATCAGTCTGAGAGTGAATCTGTGTGCTTAGATTAGGTACAATTTTATATCAAAAACATTTAGTGAGGACTAAATTAGCACTTGAGATGGAATACTCCATCAGCTGGTTTGGTCCTCTTTTTATTTGAGAGGAGTGGTCGA TTTCAAAATGGGAAAGTGGTGTTTGAGTTATAATAGGACCAAGTTAGATGAAACCCAGTAAAATCAAGGGGTTATGCCTAATTTAGTCCTTATTTTTATACCATTTTAGCGGTAAAGATAGGGCAGCGCTGCAATATTAAACCGAAAATCCAAGTCAGTATCACAGATGTCCGCAATCAGTCTGAGAGTGAATCTGTGTGCTTAGATTAGGTACAATTTTATATCAAAAACATTTAGTGAGGACTAAATTAGCACTTGAGATGGAATACTCCATCAGCTGGTTTGGTCCTCTTTTTATTTGAGAGGAGTGGTCGAATGGGCAAGGTGTTAATTTGGTTCG TCGACCACTCCTCTCAAATAAAAAGAGGACCAAACCAGCTGATGGAGTATTCCATCTCAAGTGCTAATTTAGTCCTCACTAAAT 84 TTerm_0387 NZ_LR027880.1 2790744 2790752 9 2790761 2790769 9 8 88 0 13 72 27 75 25 0 2790756 TTTATATGC GCATAGAAA True CATTCTACT AAACGTTTT False True + TTTATATGC CTATTTTA GCATAGAAA AAACGTTTT 50 RIL182_RS13360 intergenic 2790609 2790844 - down ATAAAGTAACACAACTAAAATAAAGAAAGACAGCCCACTATTCCGTAAAATAATGGAGTAATAGAGAAAACGTTTTTTCTATGCTAAAATAGGCATATAAAGTAGAATGACAATCAAGATATACAAGAAAGCACTTAAACTCTACCGTTTGTCATGTAATTGTATAGCTTACTTGCTAGAGTGCAAATGAGTATTTTGATAAGATTTATACACAAAATCAAAAGGAGGAACACAT ATCCGGGTGCAAATGCTCATGTGTGATAAAGTAACACAACTAAAATAAAGAAAGACAGCCCACTATTCCGTAAAATAATGGAGTAATAGAGAAAACGTTTTTTCTATGCTAAAATAGGCATATAAAGTAGAATGACAATCAAGATATACAAGAAAGCACTTAAACTCTACCGTTTGTCATGTAATTGTATAGCTTACTTGCTAGAGTGCAAATGAGTATTTTGATAAGATTTATACACAAAATCAAAAGGAGGAACACATATGGAGTTCGCAGAAAAACTTATAA ATGTGTTCCTCCTTTTGATTTTGTGTATAAATCTTATCAAAATACTCATTTGCACTCTAGCAAGTAAGCTATACAATTACATGACAAACGGTAGAGTTTAAGTGCTTTCTTGTATATCTTGATTGTCATTCTACTTTATATGCCTATTTTAGCATAGAAA 160 TTerm_0388 NZ_LR027880.1 2795943 2795960 18 2795968 2795985 18 7 77 0 16 69 30 78 21 0 2795963 TTGACCTCCTTTTTTGAT ATAAAAAAAGACCGTCAA True CATTGTGAT CTTTTCGCA False True + TTGACCTCCTTTTTTGAT TTTGGGG ATAAAAAAAGACCGTCAA CTTTTCGCA 32 RIL182_RS13390 intergenic 2795937 2795982 - down ACGGTCTTTTTTTATCCCCAAAATCAAAAAAGGAGGTCAATCACA ACTGGTCGCACTATGCGAAAAGTTGACGGTCTTTTTTTATCCCCAAAATCAAAAAAGGAGGTCAATCACAATGACAAAACCGAAAACCCTTGACC TGTGATTGACCTCCTTTTTTGATTTTGGGGATAAAAAAAGACCGTCAA 48 TTerm_0389 NZ_LR027880.1 2812222 2812227 6 2812235 2812240 6 7 100 0 12 50 50 50 50 0 2812230 TGTTCC GGAACA True TAAAACTTT TTTTGGATT True True + TGTTCC GTTATGT GGAACA TTTTGGATT 48 RIL182_RS21740 intergenic 2812036 2812253 - down AACAAATCCAAAATGTTCCACATAACGGAACAAAGTTTTACATTGTGAAAATGTTACAAAAAAACAGGGAAAAACAGTAAAAAAAATGTTGCTATTTAGACAAAATATGTTAGAATAAATATGTGCGTTTTAGAAAGGCACATAACATGGCTTGATTATGGAAACAAATACGGTGTCCATAATTACATAGTAATTTATTTTAGGAGGAATTATCAAA TGTATGCAAAATGGAAAAAGAAATAAACAAATCCAAAATGTTCCACATAACGGAACAAAGTTTTACATTGTGAAAATGTTACAAAAAAACAGGGAAAAACAGTAAAAAAAATGTTGCTATTTAGACAAAATATGTTAGAATAAATATGTGCGTTTTAGAAAGGCACATAACATGGCTTGATTATGGAAACAAATACGGTGTCCATAATTACATAGTAATTTATTTTAGGAGGAATTATCAAAATGGCAAACAAATGGGTGTATATGT TTTGATAATTCCTCCTAAAATAAATTACTATGTAATTATGGACACCGTATTTGTTTCCATAATCAAGCCATGTTATGTGCCTTTCTAAAACGCACATATTTATTCTAACATATTTTGTCTAAATAGCAACATTTTTTTTACTGTTTTTCCCTGTTTTTTTGTAACATTTTCACAATGTAAAACTTTGTTCCGTTATGTGGAACA 204 TTerm_0390 NZ_LR027880.1 2813524 2813531 8 2813541 2813548 8 9 87 0 11 43 56 42 57 0 2813535 ATCCGCCA TGACGGAT True ATCTTCAAA GTTTTTATT False True + ATCCGCCA CACTTTACC TGACGGAT GTTTTTATT 54 RIL182_RS21745 intergenic 2813500 2813553 - down AAAACATCCGTCAGGTAAAGTGTGGCGGATTTGAAGATATTGACGTGCTGGAA TCGACTTAGCTGCTGTAAAAAAATAAAAACATCCGTCAGGTAAAGTGTGGCGGATTTGAAGATATTGACGTGCTGGAAGTGAATGATGGAACGGGTGTGTTTG TTCCAGCACGTCAATATCTTCAAATCCGCCACACTTTACCTGACGGAT 48 TTerm_0391 NZ_LR027880.1 2814825 2814844 20 2814854 2814873 20 9 90 0 30 60 40 61 38 0 2814848 AAAAACAGACGGATCATTCC GGAATAATCCGTCTGTCTTT True TATGAATGA TTCTTTTTA True True + AAAAACAGACGGATCATTCC CACCCAACA GGAATAATCCGTCTGTCTTT TTCTTTTTA 76 RIL182_RS13485 intergenic 2814605 2814902 - down GGATTTTTCGAAGCGGAGAATAAAAAGAAAAAGACAGACGGATTATTCCTGTTGGGTGGGAATGATCCGTCTGTTTTTCATTCATAGGAAATTACGTCCTATGAATGAAAACGCCCTCCGGGCGGGATGCGCACCTCGCGGAGGAGAAGAAAAATATTTTGAAGTATGTACAGGCAGATAGTCTGCGGAGATATGATAGAAATGATTTCGCAAACAATTGAAAATAGTCGTATTGCGGTTATAATATAGAAAAGGTAATGTAACATAGCGGTACAAATGAAGGAGGAGTTTTAGTTT ACTATGACACGGAAGTAGATTTCTAGGATTTTTCGAAGCGGAGAATAAAAAGAAAAAGACAGACGGATTATTCCTGTTGGGTGGGAATGATCCGTCTGTTTTTCATTCATAGGAAATTACGTCCTATGAATGAAAACGCCCTCCGGGCGGGATGCGCACCTCGCGGAGGAGAAGAAAAATATTTTGAAGTATGTACAGGCAGATAGTCTGCGGAGATATGATAGAAATGATTTCGCAAACAATTGAAAATAGTCGTATTGCGGTTATAATATAGAAAAGGTAATGTAACATAGCGGTACAAATGAAGGAGGAGTTTTAGTTTATGAAAGGAGGGATGAAAAAAGCTT AAACTAAAACTCCTCCTTCATTTGTACCGCTATGTTACATTACCTTTTCTATATTATAACCGCAATACGACTATTTTCAATTGTTTGCGAAATCATTTCTATCATATCTCCGCAGACTATCTGCCTGTACATACTTCAAAATATTTTTCTTCTCCTCCGCGAGGTGCGCATCCCGCCCGGAGGGCGTTTTCATTCATAGGACGTAATTTCCTATGAATGAAAAACAGACGGATCATTCCCACCCAACAGGAATAATCCGTCTGTCTTT 268 TTerm_0392 NZ_LR027880.1 2816275 2816280 6 2816288 2816293 6 7 100 0 12 100 0 100 0 0 2816283 AAAAAT ATTTTT True TATCTTTCA ATACATTTT False True + AAAAAT AAGAAGC ATTTTT ATACATTTT 24 RIL182_RS13490 intergenic 2816119 2816322 - down GAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAG AATGTGGATTTAAAAACAATGCTTAGAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAGATGGCAAGATTTACATTACCACGCG CTTTCCTCCAATCTGCCGCCATCAAAAGGCCGCCCCCTGACACATACACATGCCTGTATTTTTTGTGTCATTTACTGTGTGCAACTTTTATATAACCATCACATATTTTGTTAATTAAATAACAATATGTATGGTAACATTATATCATATCTTTCAAAAATAAGAAGCATTTTT 174 TTerm_0393 NZ_LR027880.1 2816276 2816294 19 2816303 2816321 19 8 78 0 18 89 10 93 6 0 2816298 AAAATAAGAAGCATTTTTA TAATAATTCTTAATATTTT True ATCTTTCAA CTAAGCATT True True + AAAATAAGAAGCATTTTTA TACATTTT TAATAATTCTTAATATTTT CTAAGCATT 36 RIL182_RS13490 intergenic 2816119 2816322 - down GAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAG AATGTGGATTTAAAAACAATGCTTAGAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAGATGGCAAGATTTACATTACCACGCG CTTTCCTCCAATCTGCCGCCATCAAAAGGCCGCCCCCTGACACATACACATGCCTGTATTTTTTGTGTCATTTACTGTGTGCAACTTTTATATAACCATCACATATTTTGTTAATTAAATAACAATATGTATGGTAACATTATATCATATCTTTCAAAAATAAGAAGCATTTTTATACATTTTTAATAATTCTTAATATTTT 202 TTerm_0394 NZ_LR027880.1 2837750 2837755 6 2837761 2837766 6 5 100 0 12 83 16 83 16 0 2837757 ATACAA TTGTAT True ATATATGCA CATTTTTTA False True + ATACAA AAATA TTGTAT CATTTTTTA 32 RIL182_RS13565 intergenic 2837646 2837916 - down ATAGAATATTTTCAGGAGAAAGCAGGGAACGTCAGAATGATTTGACGCTCCCTGCTTTTTTCAGAAATGTGGGTTGTCAGTTTAGCTAGCATCACTTTACCTTGATAACCATTTATTTTGATAAAGTGATGACACGCAGTATAAAAAATGATACAATATTTTTGTATGCATATATGTACGCTTAGAATTTTCTAAATGAAGAATTCTAGGAGTACATGAAAAAAGGGAAATGAAATAAAAAAGAAGGCGCTGAATTTGAAAGTGACAAAA CAGGGTATGGGTTTAAGAATTTTTAATAGAATATTTTCAGGAGAAAGCAGGGAACGTCAGAATGATTTGACGCTCCCTGCTTTTTTCAGAAATGTGGGTTGTCAGTTTAGCTAGCATCACTTTACCTTGATAACCATTTATTTTGATAAAGTGATGACACGCAGTATAAAAAATGATACAATATTTTTGTATGCATATATGTACGCTTAGAATTTTCTAAATGAAGAATTCTAGGAGTACATGAAAAAAGGGAAATGAAATAAAAAAGAAGGCGCTGAATTTGAAAGTGACAAAAATGATAAGCAGGAAAATGGCAGGCG TTTTGTCACTTTCAAATTCAGCGCCTTCTTTTTTATTTCATTTCCCTTTTTTCATGTACTCCTAGAATTCTTCATTTAGAAAATTCTAAGCGTACATATATGCATACAAAAATATTGTAT 120 TTerm_0395 NZ_LR027880.1 2843065 2843082 18 2843091 2843108 18 8 100 0 36 44 55 44 55 0 2843086 AAAATCCCCCACGCAGTG CACTGCGTGGGGGATTTT True TTAATATGA TTATATCAT True True + AAAATCCCCCACGCAGTG GCTGCAAA CACTGCGTGGGGGATTTT TTATATCAT 104 RIL182_RS13580 intergenic 2842809 2843193 - down AAAGTAAGAGTTCAATGAAATAATAAGATAGCCGAGTGAAGCAAGTGTAGATCACGATCATGTGCTGGTTTTGCACATGATATAAAAAATCCCCCACGCAGTGTTTGCAGCCACTGCGTGGGGGATTTTCATATTAAGAAGGGGGTTTTGTCATATTGACGATAGAAACCCAGCTGTTAAATATTTAACAGCAAGTCTATTATGTACCCAAAAGTACTAAAAATCCAGTGAACATATTGTGAATTTTTGTATTTTAATTGTTAATAAATGAAAATGAAACATGAAAGAGGATTGCGGATGACTTGACGTTTCCTTTGCTTTTCCCGTATAATAAAAACGTATGGGCATATGCCCGGCGTATTTTTTTTTGAAATGGAGAGTAAT GAATCTCTTATCCGATTTATGAATAAAAGTAAGAGTTCAATGAAATAATAAGATAGCCGAGTGAAGCAAGTGTAGATCACGATCATGTGCTGGTTTTGCACATGATATAAAAAATCCCCCACGCAGTGTTTGCAGCCACTGCGTGGGGGATTTTCATATTAAGAAGGGGGTTTTGTCATATTGACGATAGAAACCCAGCTGTTAAATATTTAACAGCAAGTCTATTATGTACCCAAAAGTACTAAAAATCCAGTGAACATATTGTGAATTTTTGTATTTTAATTGTTAATAAATGAAAATGAAACATGAAAGAGGATTGCGGATGACTTGACGTTTCCTTTGCTTTTCCCGTATAATAAAAACGTATGGGCATATGCCCGGCGTATTTTTTTTTGAAATGGAGAGTAATATGTCAATAGATCAGAGTAAAATCA ATTACTCTCCATTTCAAAAAAAAATACGCCGGGCATATGCCCATACGTTTTTATTATACGGGAAAAGCAAAGGAAACGTCAAGTCATCCGCAATCCTCTTTCATGTTTCATTTTCATTTATTAACAATTAAAATACAAAAATTCACAATATGTTCACTGGATTTTTAGTACTTTTGGGTACATAATAGACTTGCTGTTAAATATTTAACAGCTGGGTTTCTATCGTCAATATGACAAAACCCCCTTCTTAATATGAAAATCCCCCACGCAGTGGCTGCAAACACTGCGTGGGGGATTTT 299 TTerm_0396 NZ_LR027880.1 2860460 2860468 9 2860478 2860486 9 9 88 0 13 100 0 100 0 0 2860472 ATAATAAAA TTTTTTTAT True ACTTCATCA CCCTTTTCA False True + ATAATAAAA GCTCCTCCT TTTTTTTAT CCCTTTTCA 26 RIL182_RS13635 intergenic 2860458 2860597 - down AAGCGCAATATACAGTTGTTAGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGAGATTAAAATGTATTTTAGCCGTACTTATAACGGCATAAAATAAAATGAAAAGGGATAAAAAAAAGGAGGAGCTTTTATTATG ACACAGTATTGATTCTAAATAAATAAAGCGCAATATACAGTTGTTAGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGAGATTAAAATGTATTTTAGCCGTACTTATAACGGCATAAAATAAAATGAAAAGGGATAAAAAAAAGGAGGAGCTTTTATTATGATGAAGTATTTACAGAAATTGGGAA CATAATAAAAGCTCCTCCTTTTTTTTAT 28 TTerm_0397 NZ_LR027880.1 2860499 2860511 13 2860519 2860530 12 7 92 7 14 68 32 66 33 0 2860514 TATTTTATGCCGT ACGGCTAAAATA True TTTCATTTT CATTTTAAT False True + TATTTTATGCCGT TATAAGT ACGGCTAAAATA CATTTTAAT 60 RIL182_RS13635 intergenic 2860458 2860597 - down AAGCGCAATATACAGTTGTTAGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGAGATTAAAATGTATTTTAGCCGTACTTATAACGGCATAAAATAAAATGAAAAGGGATAAAAAAAAGGAGGAGCTTTTATTATG ACACAGTATTGATTCTAAATAAATAAAGCGCAATATACAGTTGTTAGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGAGATTAAAATGTATTTTAGCCGTACTTATAACGGCATAAAATAAAATGAAAAGGGATAAAAAAAAGGAGGAGCTTTTATTATGATGAAGTATTTACAGAAATTGGGAA CATAATAAAAGCTCCTCCTTTTTTTTATCCCTTTTCATTTTATTTTATGCCGTTATAAGTACGGCTAAAATA 72 TTerm_0398 NZ_LR027880.1 2873314 2873332 19 2873339 2873356 18 6 89 5 21 59 40 58 41 0 2873335 AAAAATAGCACTGACCAGA TCTGGCAGTGCTGTTTTT True ATAACTAAA AATTTTTCC True True + AAAAATAGCACTGACCAGA ATAAGA TCTGGCAGTGCTGTTTTT AATTTTTCC 74 RIL182_RS13665 intergenic 2873313 2873365 + down AAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTTAATTTTTCC TTCTGACGATGAGAACGATAACTAAAAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTTAATTTTTCCTAAAATGTGGTCCATTTTAATGTAT AAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTT 43 TTerm_0399 NZ_LR027880.1 2873314 2873332 19 2873339 2873356 18 6 89 5 21 59 40 58 41 0 2873335 AAAAATAGCACTGACCAGA TCTGGCAGTGCTGTTTTT True ATAACTAAA AATTTTTCC True True + AAAAATAGCACTGACCAGA ATAAGA TCTGGCAGTGCTGTTTTT AATTTTTCC 74 RIL182_RS13670 intergenic 2873313 2873365 - down GGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTTT ATACATTAAAATGGACCACATTTTAGGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTTTTTAGTTATCGTTCTCATCGTCAGAA AAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTT 43 TTerm_0400 NZ_LR027880.1 2877749 2877767 19 2877775 2877792 18 7 84 5 16 56 43 56 43 0 2877770 ACAAAAATAACCGCACAGT ACCGTGCGGCATTTTTGT True ATAAAGACA CAAACCATA True True + ACAAAAATAACCGCACAGT CTGGTAA ACCGTGCGGCATTTTTGT CAAACCATA 64 RIL182_RS13685 intergenic 2877758 2877825 + down CCGCACAGTCTGGTAAACCGTGCGGCATTTTTGTCAAACCATATGTCGGACTAACAGCTGTTTTCTT GAATAATATAAAGACACAAAAATAACCGCACAGTCTGGTAAACCGTGCGGCATTTTTGTCAAACCATATGTCGGACTAACAGCTGTTTTCTTTAACACATCATGCTGTATTCCTGTA CCGCACAGTCTGGTAAACCGTGCGGCATTTTTGT 34 TTerm_0401 NZ_LR027880.1 2877749 2877767 19 2877775 2877792 18 7 84 5 16 56 43 56 43 0 2877770 ACAAAAATAACCGCACAGT ACCGTGCGGCATTTTTGT True ATAAAGACA CAAACCATA True True + ACAAAAATAACCGCACAGT CTGGTAA ACCGTGCGGCATTTTTGT CAAACCATA 64 RIL182_RS13690 intergenic 2877758 2877825 - down AAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGG TACAGGAATACAGCATGATGTGTTAAAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGGTTATTTTTGTGTCTTTATATTATTC CCGCACAGTCTGGTAAACCGTGCGGCATTTTTGT 34 TTerm_0402 NZ_LR027880.1 2924792 2924804 13 2924809 2924821 13 4 76 0 11 88 11 100 0 0 2924806 TATAAGAAGTATT AATATCTTTTATA True TTTACTTTT TTACAGAAA False True + TATAAGAAGTATT CTGC AATATCTTTTATA TTACAGAAA 30 RIL182_RS13865 intergenic 2924627 2924834 - down GTATTTTCTGTAATATAAAAGATATTGCAGAATACTTCTTATAAAAGTAAAATTCCGCATGGATTTGCTTTTCCACACAAAAAGTAAAATTTTGACTTTTATAGATATTAATTTACAATTCTATCCACTATTTTGAAAGATTCCCCAAAGCACTTTTGATAAAATATCTGCAGTAAATGAACTTTTGCAGAAAGGAGAGCATGCTTT CACTAAAGCTTGTTTTTACTAAATAGTATTTTCTGTAATATAAAAGATATTGCAGAATACTTCTTATAAAAGTAAAATTCCGCATGGATTTGCTTTTCCACACAAAAAGTAAAATTTTGACTTTTATAGATATTAATTTACAATTCTATCCACTATTTTGAAAGATTCCCCAAAGCACTTTTGATAAAATATCTGCAGTAAATGAACTTTTGCAGAAAGGAGAGCATGCTTTATGGAACTTCAGAAATACGAACAGG AAAGCATGCTCTCCTTTCTGCAAAAGTTCATTTACTGCAGATATTTTATCAAAAGTGCTTTGGGGAATCTTTCAAAATAGTGGATAGAATTGTAAATTAATATCTATAAAAGTCAAAATTTTACTTTTTGTGTGGAAAAGCAAATCCATGCGGAATTTTACTTTTATAAGAAGTATTCTGCAATATCTTTTATA 194 TTerm_0403 NZ_LR027880.1 2930388 2930401 14 2930406 2930419 14 4 85 0 18 42 57 41 58 0 2930403 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS13905 intergenic 2930389 2930438 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAG ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTCTTAGCT AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0404 NZ_LR027880.1 2930388 2930401 14 2930406 2930419 14 4 85 0 18 42 57 41 58 0 2930403 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True + AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTAAAAAGG 84 RIL182_RS13910 intergenic 2930389 2930438 - down CTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATT AGCTAAGAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAAT AATGTGCCGCCCTGATGGGCGGCATGTTTT 30 TTerm_0405 NZ_LR027880.1 2931712 2931719 8 2931726 2931733 8 6 87 0 11 87 12 100 0 0 2931722 AAATACTT AACTATTT True TCTAGATCA TTCCTTTAT False True + AAATACTT ATTTTA AACTATTT TTCCTTTAT 30 RIL182_RS13920 intergenic 2931526 2931751 - down GTAATGTTTATAAAGGAAAAATAGTTTAAAATAAGTATTTGATCTAGATGAGTTGTTTAGATTTGATAAATGCAGATGTATTTTATAGTAACTCAAACTTCGCACATTAAAATGTGCTTATGCACCTTGAAAATTCAATAATAACTGGCATAAAAATAGCATGAAACCAATGGTTTTGGTATAATTGAGTTGCCGAAAAACAATTACAAACCGGAGGCTCATGCT AGCTGGTGGGAAAAATTGGAATGTAGTAATGTTTATAAAGGAAAAATAGTTTAAAATAAGTATTTGATCTAGATGAGTTGTTTAGATTTGATAAATGCAGATGTATTTTATAGTAACTCAAACTTCGCACATTAAAATGTGCTTATGCACCTTGAAAATTCAATAATAACTGGCATAAAAATAGCATGAAACCAATGGTTTTGGTATAATTGAGTTGCCGAAAAACAATTACAAACCGGAGGCTCATGCTATGAATAAAAGTATAACACAAGCGA AGCATGAGCCTCCGGTTTGTAATTGTTTTTCGGCAACTCAATTATACCAAAACCATTGGTTTCATGCTATTTTTATGCCAGTTATTATTGAATTTTCAAGGTGCATAAGCACATTTTAATGTGCGAAGTTTGAGTTACTATAAAATACATCTGCATTTATCAAATCTAAACAACTCATCTAGATCAAATACTTATTTTAAACTATTT 207 TTerm_0406 NZ_LR027880.1 2945990 2945995 6 2946004 2946009 6 8 100 0 12 66 33 66 33 0 2945999 TAATGG CCATTA True TGTAGCATT TATGTTTTT False True + TAATGG AACATCTC CCATTA TATGTTTTT 40 RIL182_RS14005 intergenic 2945597 2946018 - down AAAAACATATAATGGGAGATGTTCCATTAATGCTACAAGTTATGGGGCATTTCCCATTTTTAATAGTTGCAATATATAAATAGGGAAAAAGCATAGTAGATTGGTGAATATTAGGAAAATAAATATAATTCAAGAAGATTCTTTTTAAAGAAAAGGTAGAGATAATTGTAAAAACAGCTTTGGGGTTTGATAGCAAATCTTTTATAGAATACACAGTTATTTTAAGCAGGTAACCGTATTTATATGGAAAAACTCTGAACGGAACGGCTGTGAAGTGGCACAGATATGAGTACAAAATAACGCAGATGCAACAAGTGAAAGAGATAAGCTGTCTGCATTGACACAGAGATCATTTCTTGTTTGTGCCTATGGAGGATTGATAGAACCCATATCATCCGGTCAGGAAGAATAGGAGAGGTTT TGGTGCAAGAACAGTTAGAAAATTAAAAAACATATAATGGGAGATGTTCCATTAATGCTACAAGTTATGGGGCATTTCCCATTTTTAATAGTTGCAATATATAAATAGGGAAAAAGCATAGTAGATTGGTGAATATTAGGAAAATAAATATAATTCAAGAAGATTCTTTTTAAAGAAAAGGTAGAGATAATTGTAAAAACAGCTTTGGGGTTTGATAGCAAATCTTTTATAGAATACACAGTTATTTTAAGCAGGTAACCGTATTTATATGGAAAAACTCTGAACGGAACGGCTGTGAAGTGGCACAGATATGAGTACAAAATAACGCAGATGCAACAAGTGAAAGAGATAAGCTGTCTGCATTGACACAGAGATCATTTCTTGTTTGTGCCTATGGAGGATTGATAGAACCCATATCATCCGGTCAGGAAGAATAGGAGAGGTTTATGGCAGAAGGATTACAAAGGAGAA AAACCTCTCCTATTCTTCCTGACCGGATGATATGGGTTCTATCAATCCTCCATAGGCACAAACAAGAAATGATCTCTGTGTCAATGCAGACAGCTTATCTCTTTCACTTGTTGCATCTGCGTTATTTTGTACTCATATCTGTGCCACTTCACAGCCGTTCCGTTCAGAGTTTTTCCATATAAATACGGTTACCTGCTTAAAATAACTGTGTATTCTATAAAAGATTTGCTATCAAACCCCAAAGCTGTTTTTACAATTATCTCTACCTTTTCTTTAAAAAGAATCTTCTTGAATTATATTTATTTTCCTAATATTCACCAATCTACTATGCTTTTTCCCTATTTATATATTGCAACTATTAAAAATGGGAAATGCCCCATAACTTGTAGCATTAATGGAACATCTCCCATTA 412 TTerm_0407 NZ_LR027880.1 2955998 2956003 6 2956008 2956013 6 4 100 0 12 100 0 100 0 0 2956005 TAAAAT ATTTTA True TGATTGCTT TAAATTTTT False True + TAAAAT TGAG ATTTTA TAAATTTTT 24 RIL182_RS14040 intergenic 2955920 2956174 + down CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGCCTTTTTGTCATGCCCTAAATGAATGACTGCCACCTTCCATTCCAAGAATCCTGCATTGCAGGATTCTATCCTTGTTTTCAATCAAGATTGCGAACTTGTTTCGCAATTACCTACTATTACACTAATTTC GCCGATTTACTTTTGGCTGGCATAGCTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGCCTTTTTGTCATGCCCTAAATGAATGACTGCCACCTTCCATTCCAAGAATCCTGCATTGCAGGATTCTATCCTTGTTTTCAATCAAGATTGCGAACTTGTTTCGCAATTACCTACTATTACACTAATTTCTATGGCCAGATTCCGATGATATTTC CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTA 93 TTerm_0408 NZ_LR027880.1 2955998 2956003 6 2956008 2956013 6 4 100 0 12 100 0 100 0 0 2956005 TAAAAT ATTTTA True TGATTGCTT TAAATTTTT False True + TAAAAT TGAG ATTTTA TAAATTTTT 24 RIL182_RS14045 intergenic 2955920 2956174 - down GAAATTAGTGTAATAGTAGGTAATTGCGAAACAAGTTCGCAATCTTGATTGAAAACAAGGATAGAATCCTGCAATGCAGGATTCTTGGAATGGAAGGTGGCAGTCATTCATTTAGGGCATGACAAAAAGGCTTCATAGTTAGTATGAAGCAGAAAAATTTATAAAATCTCAATTTTAAGCAATCAAAGGCTTAAGACTTCGAATGTATTGATGTTGATGAATTTTATCAGCAACAATTACTGTAACAAGTTGAG GAAATATCATCGGAATCTGGCCATAGAAATTAGTGTAATAGTAGGTAATTGCGAAACAAGTTCGCAATCTTGATTGAAAACAAGGATAGAATCCTGCAATGCAGGATTCTTGGAATGGAAGGTGGCAGTCATTCATTTAGGGCATGACAAAAAGGCTTCATAGTTAGTATGAAGCAGAAAAATTTATAAAATCTCAATTTTAAGCAATCAAAGGCTTAAGACTTCGAATGTATTGATGTTGATGAATTTTATCAGCAACAATTACTGTAACAAGTTGAGCTATGCCAGCCAAAAGTAAATCGGC CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTA 93 TTerm_0409 NZ_LR027880.1 2956025 2956032 8 2956038 2956045 8 5 100 0 16 62 37 62 37 0 2956034 GCTTCATA TATGAAGC True ATTTTTCTG CTTTTTGTC False True + GCTTCATA CTAAC TATGAAGC CTTTTTGTC 40 RIL182_RS14040 intergenic 2955920 2956174 + down CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGCCTTTTTGTCATGCCCTAAATGAATGACTGCCACCTTCCATTCCAAGAATCCTGCATTGCAGGATTCTATCCTTGTTTTCAATCAAGATTGCGAACTTGTTTCGCAATTACCTACTATTACACTAATTTC GCCGATTTACTTTTGGCTGGCATAGCTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGCCTTTTTGTCATGCCCTAAATGAATGACTGCCACCTTCCATTCCAAGAATCCTGCATTGCAGGATTCTATCCTTGTTTTCAATCAAGATTGCGAACTTGTTTCGCAATTACCTACTATTACACTAATTTCTATGGCCAGATTCCGATGATATTTC CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGC 125 TTerm_0410 NZ_LR027880.1 2956025 2956032 8 2956038 2956045 8 5 100 0 16 62 37 62 37 0 2956034 GCTTCATA TATGAAGC True ATTTTTCTG CTTTTTGTC False True + GCTTCATA CTAAC TATGAAGC CTTTTTGTC 40 RIL182_RS14045 intergenic 2955920 2956174 - down GAAATTAGTGTAATAGTAGGTAATTGCGAAACAAGTTCGCAATCTTGATTGAAAACAAGGATAGAATCCTGCAATGCAGGATTCTTGGAATGGAAGGTGGCAGTCATTCATTTAGGGCATGACAAAAAGGCTTCATAGTTAGTATGAAGCAGAAAAATTTATAAAATCTCAATTTTAAGCAATCAAAGGCTTAAGACTTCGAATGTATTGATGTTGATGAATTTTATCAGCAACAATTACTGTAACAAGTTGAG GAAATATCATCGGAATCTGGCCATAGAAATTAGTGTAATAGTAGGTAATTGCGAAACAAGTTCGCAATCTTGATTGAAAACAAGGATAGAATCCTGCAATGCAGGATTCTTGGAATGGAAGGTGGCAGTCATTCATTTAGGGCATGACAAAAAGGCTTCATAGTTAGTATGAAGCAGAAAAATTTATAAAATCTCAATTTTAAGCAATCAAAGGCTTAAGACTTCGAATGTATTGATGTTGATGAATTTTATCAGCAACAATTACTGTAACAAGTTGAGCTATGCCAGCCAAAAGTAAATCGGC CTCAACTTGTTACAGTAATTGTTGCTGATAAAATTCATCAACATCAATACATTCGAAGTCTTAAGCCTTTGATTGCTTAAAATTGAGATTTTATAAATTTTTCTGCTTCATACTAACTATGAAGC 125 TTerm_0411 NZ_LR027880.1 2992992 2993004 13 2993011 2993023 13 6 100 0 26 69 30 69 30 0 2993007 AAAAACACCAGTA TACTGGTGTTTTT True CGCATAATA TTGATTCAT True True + AAAAACACCAGTA CCGTCA TACTGGTGTTTTT TTGATTCAT 76 RIL182_RS14210 intergenic 2992939 2993156 + down TTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGT AAAACTTGTTAACGGTTTAGCTTAATTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGTTATTTTTCTGACCGGCTGTACTTCA TTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTT 84 TTerm_0412 NZ_LR027880.1 2992992 2993004 13 2993011 2993023 13 6 100 0 26 69 30 69 30 0 2993007 AAAAACACCAGTA TACTGGTGTTTTT True CGCATAATA TTGATTCAT True True + AAAAACACCAGTA CCGTCA TACTGGTGTTTTT TTGATTCAT 76 RIL182_RS14220 intergenic 2992939 2993156 - down ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAA TGAAGTACAGCCGGTCAGAAAAATAACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAATTAAGCTAAACCGTTAACAAGTTTT TTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTT 84 TTerm_0413 NZ_LR027880.1 3005960 3005965 6 3005973 3005978 6 7 100 0 12 66 33 66 33 0 3005968 TAACTG CAGTTA True TTCCAGCAT CTTTTTACC False True + TAACTG TTTCGTC CAGTTA CTTTTTACC 40 RIL182_RS14275 intergenic 3005937 3006090 - down AGCATCATAGATAGATGCATAGTAATTAAAGATTACATAGTAATAAAGATTACATAGTAATAAAGATTACATAGTAATACACTGAATTATATTTTTAATAAGAGGTAAAAAGTAACTGGACGAAACAGTTATGCTGGAAAAGGAATCAAAGAC TAAATATGGTTCCGATGTTCCCGTAAGCATCATAGATAGATGCATAGTAATTAAAGATTACATAGTAATAAAGATTACATAGTAATAAAGATTACATAGTAATACACTGAATTATATTTTTAATAAGAGGTAAAAAGTAACTGGACGAAACAGTTATGCTGGAAAAGGAATCAAAGACATGGAAGAGAAAAAAGTAAACATCC GTCTTTGATTCCTTTTCCAGCATAACTGTTTCGTCCAGTTA 41 TTerm_0414 NZ_LR027880.1 3008815 3008836 22 3008841 3008862 22 4 90 0 34 68 31 70 30 0 3008838 TATGAAGTAAAAAAACAGGAGC GCCCCTGTTTTTTTACTTTATA True CAATTTCCT CTGCCTTGT True True + TATGAAGTAAAAAAACAGGAGC TTAT GCCCCTGTTTTTTTACTTTATA CTGCCTTGT 108 RIL182_RS14280 intergenic 3008767 3008926 + down TCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATACTGCCTTGTTCTACCATCCATGAAAGGACCTGATTGTGACTGTGCCTCTGACATCTATGATTCT TGAGAAAAATAAATATGAGGACTAATCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATACTGCCTTGTTCTACCATCCATGAAAGGACCTGATTGTGACTGTGCCTCTGACATCTATGATTCTCACTGTCTCAGTGCTTCTACCAACA TCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATA 95 TTerm_0415 NZ_LR027880.1 3008815 3008836 22 3008841 3008862 22 4 90 0 34 68 31 70 30 0 3008838 TATGAAGTAAAAAAACAGGAGC GCCCCTGTTTTTTTACTTTATA True CAATTTCCT CTGCCTTGT True True + TATGAAGTAAAAAAACAGGAGC TTAT GCCCCTGTTTTTTTACTTTATA CTGCCTTGT 108 RIL182_RS14285 intergenic 3008767 3008926 - down AGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCATAGGAAATTGTCCGCTATGAATTAATAGAACCATAATCACATCCTGTGA TGTTGGTAGAAGCACTGAGACAGTGAGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCATAGGAAATTGTCCGCTATGAATTAATAGAACCATAATCACATCCTGTGATTAGTCCTCATATTTATTTTTCTCA TCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATA 95 TTerm_0416 NZ_LR027880.1 3026321 3026329 9 3026336 3026344 9 6 100 0 18 66 33 66 33 0 3026332 GTGTGAAAA TTTTCACAC True ATTCTTATG TGTTTTCCA False True + GTGTGAAAA AGAAGA TTTTCACAC TGTTTTCCA 44 RIL182_RS14365 intergenic 3026302 3026461 - down GTACGCAAGTGAACATGGTTAAAGATAAGGTTGAGGTTTATTTAATCTCAACCTTTTTTTAGAGCGTCGGATGATTTTATTCGTTAATTTCGTGAAAACCGACAGGAATGGAAAACAGTGTGAAAATCTTCTTTTTCACACATAAGAATGGAGATTAAC ACAAGAAGTACGGCATTAACAAATAGTACGCAAGTGAACATGGTTAAAGATAAGGTTGAGGTTTATTTAATCTCAACCTTTTTTTAGAGCGTCGGATGATTTTATTCGTTAATTTCGTGAAAACCGACAGGAATGGAAAACAGTGTGAAAATCTTCTTTTTCACACATAAGAATGGAGATTAACATGAGATATTCCGGGATTGGCGGAC GTTAATCTCCATTCTTATGTGTGAAAAAGAAGATTTTCACAC 42 TTerm_0417 NZ_LR027880.1 3029847 3029855 9 3029862 3029870 9 6 88 0 13 66 33 62 37 0 3029858 TTCCTGTAT ATTCAGGAA True TAGGCATTT CTTTTTATC False True + TTCCTGTAT TTTTTG ATTCAGGAA CTTTTTATC 42 RIL182_RS14385 intergenic 3029711 3029884 - down AGAGTGATAAAAAGTTCCTGAATCAAAAAATACAGGAAAATGCCTAAATTGCGGGAATTGCAACCATCAGTTGACAGATTGACAGGCACATTTGGTAGCCTGCAACCGGTCAAAATGGGTATGATGGAGGCGTAACAAAGATCACATCATTGAAAAAGAAAAGAGGATGAGTT AATTTGCAGTGGGCGGTCGTTTGTGAGAGTGATAAAAAGTTCCTGAATCAAAAAATACAGGAAAATGCCTAAATTGCGGGAATTGCAACCATCAGTTGACAGATTGACAGGCACATTTGGTAGCCTGCAACCGGTCAAAATGGGTATGATGGAGGCGTAACAAAGATCACATCATTGAAAAAGAAAAGAGGATGAGTTATGATTTTAGCTGAAAAAATTATGG AACTCATCCTCTTTTCTTTTTCAATGATGTGATCTTTGTTACGCCTCCATCATACCCATTTTGACCGGTTGCAGGCTACCAAATGTGCCTGTCAATCTGTCAACTGATGGTTGCAATTCCCGCAATTTAGGCATTTTCCTGTATTTTTTGATTCAGGAA 159 TTerm_0418 NZ_LR027880.1 3033693 3033707 15 3033716 3033730 15 8 93 0 25 43 56 42 57 0 3033711 ACGAGGGCGAAGATG CATCTTCGCCCTTGT True TTAATGATA TTTTTTATA False True + ACGAGGGCGAAGATG CTTCTACA CATCTTCGCCCTTGT TTTTTTATA 66 RIL182_RS14390 intergenic 3033682 3033748 + down GATTAATGATACGAGGGCGAAGATGCTTCTACACATCTTCGCCCTTGTTTTTTTATAGTCAATTTT GAATAACGAAATAATTTTTTCATAGGATTAATGATACGAGGGCGAAGATGCTTCTACACATCTTCGCCCTTGTTTTTTTATAGTCAATTTTTATTTCGCCTTGCGTAGTACCAATA GATTAATGATACGAGGGCGAAGATGCTTCTACACATCTTCGCCCTTGT 48 TTerm_0419 NZ_LR027880.1 3033693 3033707 15 3033716 3033730 15 8 93 0 25 43 56 42 57 0 3033711 ACGAGGGCGAAGATG CATCTTCGCCCTTGT True TTAATGATA TTTTTTATA False True + ACGAGGGCGAAGATG CTTCTACA CATCTTCGCCCTTGT TTTTTTATA 66 RIL182_RS14395 intergenic 3033682 3033748 - down AAAATTGACTATAAAAAAACAAGGGCGAAGATGTGTAGAAGCATCTTCGCCCTCGTATCATTAATC TATTGGTACTACGCAAGGCGAAATAAAAATTGACTATAAAAAAACAAGGGCGAAGATGTGTAGAAGCATCTTCGCCCTCGTATCATTAATCCTATGAAAAAATTATTTCGTTATTC GATTAATGATACGAGGGCGAAGATGCTTCTACACATCTTCGCCCTTGT 48 TTerm_0420 NZ_LR027880.1 3065803 3065817 15 3065827 3065841 15 9 100 0 30 60 40 60 40 0 3065821 GCAAAAAGACGATTC GAATCGTCTTTTTGC True GATTACAAG CTTACTATT True True + GCAAAAAGACGATTC CTTTTGTCA GAATCGTCTTTTTGC CTTACTATT 84 RIL182_RS14525 intergenic 3065670 3065869 - down AAACAGACAGTAAAGACATAATAGTAAGGCAAAAAGACGATTCTGACAAAAGGAATCGTCTTTTTGCTTGTAATCTGGAAAAGCTGTGATATAATACAAACAAAAGTTAGATAACACTAACAAAAGTAAGGAAAGACTTTAATACCATTCAGAATAGATAAGGATATAAGAACAATTCCGTAATGGGAAAGGGGAGCAT CAGAAATAGAACAATATTTACAGTGAAACAGACAGTAAAGACATAATAGTAAGGCAAAAAGACGATTCTGACAAAAGGAATCGTCTTTTTGCTTGTAATCTGGAAAAGCTGTGATATAATACAAACAAAAGTTAGATAACACTAACAAAAGTAAGGAAAGACTTTAATACCATTCAGAATAGATAAGGATATAAGAACAATTCCGTAATGGGAAAGGGGAGCATATGTCAGAAGAAGAAAGAAAATTTT ATGCTCCCCTTTCCCATTACGGAATTGTTCTTATATCCTTATCTATTCTGAATGGTATTAAAGTCTTTCCTTACTTTTGTTAGTGTTATCTAACTTTTGTTTGTATTATATCACAGCTTTTCCAGATTACAAGCAAAAAGACGATTCCTTTTGTCAGAATCGTCTTTTTGC 171 TTerm_0421 NZ_LR027880.1 3073208 3073226 19 3073233 3073251 19 6 100 0 38 73 26 73 26 0 3073229 TATAAAGAAAAGACGATTC GAATCGTCTTTTCTTTATA True TCACTATAT ATATATGCT True True + TATAAAGAAAAGACGATTC CACTCA GAATCGTCTTTTCTTTATA ATATATGCT 100 RIL182_RS14540 intergenic 3073164 3073260 + down TATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATAATATATGCT GGTTGGACGGGTTGATACGAAGTAATATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATAATATATGCTTATTTTTTCCCACGCAGCAGCTTAA TATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATA 87 TTerm_0422 NZ_LR027880.1 3073208 3073226 19 3073233 3073251 19 6 100 0 38 73 26 73 26 0 3073229 TATAAAGAAAAGACGATTC GAATCGTCTTTTCTTTATA True TCACTATAT ATATATGCT True True + TATAAAGAAAAGACGATTC CACTCA GAATCGTCTTTTCTTTATA ATATATGCT 100 RIL182_RS14545 intergenic 3073164 3073260 - down AGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTATATATAGTGATCAATGTCTGCGGAGTAGGCATTTTGTGTATTATA TTAAGCTGCTGCGTGGGAAAAAATAAGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTATATATAGTGATCAATGTCTGCGGAGTAGGCATTTTGTGTATTATATTACTTCGTATCAACCCGTCCAACC TATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATA 87 TTerm_0423 NZ_LR027880.1 3094323 3094339 17 3094348 3094364 17 8 94 0 29 73 26 75 25 0 3094343 AAAAAGATGATTTGTAC GTACGAATCATCTTTTT True CACTAACAA GTTTATGGC True True + AAAAAGATGATTTGTAC TCCCGCAG GTACGAATCATCTTTTT GTTTATGGC 82 RIL182_RS14625 intergenic 3094309 3094412 + down TTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTTGTTTATGGCAGCACTTTTTCTCACAATCTGTAATATTTATTATTTTCT CAAACGTGCTAATATGAAAAAATAATTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTTGTTTATGGCAGCACTTTTTCTCACAATCTGTAATATTTATTATTTTCTCACGACTGTTCTTCCATATCGGCAT TTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTT 55 TTerm_0424 NZ_LR027880.1 3094323 3094339 17 3094348 3094364 17 8 94 0 29 73 26 75 25 0 3094343 AAAAAGATGATTTGTAC GTACGAATCATCTTTTT True CACTAACAA GTTTATGGC True True + AAAAAGATGATTTGTAC TCCCGCAG GTACGAATCATCTTTTT GTTTATGGC 82 RIL182_RS14630 intergenic 3094309 3094412 - down AGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTTTTGTTAGTGAAAAA ATGCCGATATGGAAGAACAGTCGTGAGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTTTTGTTAGTGAAAAATTATTTTTTCATATTAGCACGTTTG TTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTT 55 TTerm_0425 NZ_LR027880.1 3100097 3100110 14 3100117 3100130 14 6 92 0 23 32 67 30 69 0 3100113 ACAGGGTTTCCGGG CCCGGAAACCCCGT True AACTGCATA TGTATTTTT False True + ACAGGGTTTCCGGG AAAACC CCCGGAAACCCCGT TGTATTTTT 86 RIL182_RS14660 intergenic 3100071 3100155 - down ATCATCGCAAAATAGTAAAAATACAACGGGGTTTCCGGGGGTTTTCCCGGAAACCCTGTATGCAGTTTGAGAGAGGAAAACGTT TAGACGCAGACTTCAAGGAAGTTTAATCATCGCAAAATAGTAAAAATACAACGGGGTTTCCGGGGGTTTTCCCGGAAACCCTGTATGCAGTTTGAGAGAGGAAAACGTTATGGCAGATAAGAGAGATTATTATG AACGTTTTCCTCTCTCAAACTGCATACAGGGTTTCCGGGAAAACCCCCGGAAACCCCGT 59 TTerm_0426 NZ_LR027880.1 3103923 3103933 11 3103939 3103949 11 5 81 0 12 72 27 77 22 0 3103935 CAACACTAATT AATTTCTGTTG True TCTTTTGTC TTTTATATT False True + CAACACTAATT TTTAT AATTTCTGTTG TTTTATATT 32 RIL182_RS14675 intergenic 3103825 3103935 - down AAAATTAGTGTTGACAAAAGAATATGATGGTGCTATTTTAAGTACATAGATGTTAGCACTCCACAATAATGAGTGCTAACAGATAAAAAGGTAACTGAGATCAGAGGCAG AAAATATAAAACAACAGAAATTATAAAAATTAGTGTTGACAAAAGAATATGATGGTGCTATTTTAAGTACATAGATGTTAGCACTCCACAATAATGAGTGCTAACAGATAAAAAGGTAACTGAGATCAGAGGCAGATGCCGGATTCTTACAGAAAGTTAC CTGCCTCTGATCTCAGTTACCTTTTTATCTGTTAGCACTCATTATTGTGGAGTGCTAACATCTATGTACTTAAAATAGCACCATCATATTCTTTTGTCAACACTAATTTTTATAATTTCTGTTG 124 TTerm_0427 NZ_LR027880.1 3117153 3117161 9 3117166 3117174 9 4 88 0 13 72 27 75 25 0 3117163 CAACGATTT AAATCTTTG True TATTTTGTC TTAATTTTG False True + CAACGATTT TTAG AAATCTTTG TTAATTTTG 34 RIL182_RS22340 intergenic 3117046 3117202 - down GTCATAACACTCATATGTGCAAAATTAACAAAGATTTCTAAAAATCGTTGACAAAATAAGTGAGATATGCTAATTTTGATTTGTTAGGCAAAACAGATGACAAAGAGGATTCTGTTGAATGGTTATTTTATGTATTTAGGAGGTTTTTAAAGAGTT GAACCAGTAAAGTTACTGTGAAATAGTCATAACACTCATATGTGCAAAATTAACAAAGATTTCTAAAAATCGTTGACAAAATAAGTGAGATATGCTAATTTTGATTTGTTAGGCAAAACAGATGACAAAGAGGATTCTGTTGAATGGTTATTTTATGTATTTAGGAGGTTTTTAAAGAGTTATGCAGCAGGGAACTGTAAAATGGT AACTCTTTAAAAACCTCCTAAATACATAAAATAACCATTCAACAGAATCCTCTTTGTCATCTGTTTTGCCTAACAAATCAAAATTAGCATATCTCACTTATTTTGTCAACGATTTTTAGAAATCTTTG 128 TTerm_0428 NZ_LR027880.1 3131262 3131267 6 3131276 3131281 6 8 100 0 12 83 16 83 16 0 3131271 AAAACT AGTTTT True ACCATGTCA TCCAGTTTT False True + AAAACT GGAAAAAA AGTTTT TCCAGTTTT 32 RIL182_RS14780 intergenic 3131178 3131487 - down AACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGT AAGCGATAGAGTTGTCCATATTGTAAACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGTATGGATATAGAAACAATAAAAAAAG ACTTTTTTCACTTTCATTACTGTAATATTTTATTTCTGTTGACATCATTTACTTTAATCTTTAAATCACTAAAAGACCATGTCAAAACTGGAAAAAAAGTTTT 103 TTerm_0429 NZ_LR027880.1 3131373 3131380 8 3131386 3131393 8 5 87 0 11 87 12 100 0 0 3131382 AAGATTAA TTAATGTT True AAATTAACA ACTTTTACT False True + AAGATTAA CATTT TTAATGTT ACTTTTACT 30 RIL182_RS14780 intergenic 3131178 3131487 - down AACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGT AAGCGATAGAGTTGTCCATATTGTAAACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGTATGGATATAGAAACAATAAAAAAAG ACTTTTTTCACTTTCATTACTGTAATATTTTATTTCTGTTGACATCATTTACTTTAATCTTTAAATCACTAAAAGACCATGTCAAAACTGGAAAAAAAGTTTTTCCAGTTTTGACATGGTCTTTCCGCAATATCTATAATATAATCTTTTTAAATTAATAGAAACGAGGTTCAAATACATATGAAAAAATTAACAAGATTAACATTTTTAATGTT 215 TTerm_0430 NZ_LR027880.1 3131364 3131374 11 3131383 3131393 11 8 81 0 12 90 9 100 0 0 3131378 AAAATTAACAA TTTTTAATGTT True CATATGAAA ACTTTTACT True True + AAAATTAACAA GATTAACA TTTTTAATGTT ACTTTTACT 24 RIL182_RS14780 intergenic 3131178 3131487 - down AACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGT AAGCGATAGAGTTGTCCATATTGTAAACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGTATGGATATAGAAACAATAAAAAAAG ACTTTTTTCACTTTCATTACTGTAATATTTTATTTCTGTTGACATCATTTACTTTAATCTTTAAATCACTAAAAGACCATGTCAAAACTGGAAAAAAAGTTTTTCCAGTTTTGACATGGTCTTTCCGCAATATCTATAATATAATCTTTTTAAATTAATAGAAACGAGGTTCAAATACATATGAAAAAATTAACAAGATTAACATTTTTAATGTT 215 TTerm_0431 NZ_LR027880.1 3138143 3138155 13 3138160 3138172 13 4 92 0 21 53 46 50 50 0 3138157 AAAATGCCGTCCA TGGTCGGCATTTT True TGAATTATA TTGTTATTC True True + AAAATGCCGTCCA TTCC TGGTCGGCATTTT TTGTTATTC 74 RIL182_RS14805 intergenic 3137772 3138182 + down TACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTTTTGTTATTCT TCTTGAAATGTTTTATCAACACTAATACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTTTTGTTATTCTTATGTAAGTAAACTAAGTATCATCT TACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTT 400 TTerm_0432 NZ_LR027880.1 3138143 3138155 13 3138160 3138172 13 4 92 0 21 53 46 50 50 0 3138157 AAAATGCCGTCCA TGGTCGGCATTTT True TGAATTATA TTGTTATTC True True + AAAATGCCGTCCA TTCC TGGTCGGCATTTT TTGTTATTC 74 RIL182_RS14810 intergenic 3137772 3138182 - down AGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTTTATAATTCATAAGATTCATAGGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTCTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGCGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTACTAATTTTCTACTAAAGTCACAAAAACAGTCCCGGATTTGTGCAGTTTGCCAGCAGCTAAGTTGTGAGCCACCTTTTGACACCCCGAATCTTCATAGGAAATTACGTCCTATGAATTATAAAGTA AGATGATACTTAGTTTACTTACATAAGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTTTATAATTCATAAGATTCATAGGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTCTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGCGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTACTAATTTTCTACTAAAGTCACAAAAACAGTCCCGGATTTGTGCAGTTTGCCAGCAGCTAAGTTGTGAGCCACCTTTTGACACCCCGAATCTTCATAGGAAATTACGTCCTATGAATTATAAAGTATTAGTGTTGATAAAACATTTCAAGA TACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTT 400 TTerm_0433 NZ_LR027880.1 3142673 3142696 24 3142704 3142727 24 7 79 0 23 70 29 68 31 0 3142699 AAATTTTAAACATTCCGGCGCTAT ATAGTGCCGGAAAATTTTATATTT True TATATGGTA TAATGAGGT False True + AAATTTTAAACATTCCGGCGCTAT TTTTGCT ATAGTGCCGGAAAATTTTATATTT TAATGAGGT 62 RIL182_RS14825 intergenic 3142647 3142745 + down TCCTCTTTCCGATATAATATATGGTAAATTTTAAACATTCCGGCGCTATTTTTGCTATAGTGCCGGAAAATTTTATATTTTAATGAGGTGAATTTTCG TCCGAATTACAGTATTGACGAATAATCCTCTTTCCGATATAATATATGGTAAATTTTAAACATTCCGGCGCTATTTTTGCTATAGTGCCGGAAAATTTTATATTTTAATGAGGTGAATTTTCGTGGACGCAAGTGCCATATCACAGAT TCCTCTTTCCGATATAATATATGGTAAATTTTAAACATTCCGGCGCTATTTTTGCTATAGTGCCGGAAAATTTTATATTT 80 TTerm_0434 NZ_LR027880.1 3151369 3151375 7 3151382 3151388 7 6 100 0 14 85 14 85 14 0 3151378 TGTATTA TAATACA True TTCTTTTTT GTGGTTTTG False True + TGTATTA CTGTAA TAATACA GTGGTTTTG 36 RIL182_RS14865 intergenic 3151247 3151527 - down ACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAA GTGAGTCAACATGCTTGCATGATTGACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAAATGGGTAACAAGACAAAACCGAAAA TTTTATTACTCCCTTTTTTTATTCGATTTACGGTGATTGTATCATTATCTATCTGCCAAAAAAAGGCACTTAAGCAAATATTAAGAAATCTTAAGTTTTCCATCCGTAAATCTTTCTTTTTTGTATTACTGTAATAATACA 141 TTerm_0435 NZ_LR027880.1 3151375 3151380 6 3151385 3151390 6 4 100 0 12 66 33 66 33 0 3151382 ACTGTA TACAGT True TTTGTATTA GGTTTTGTT False True + ACTGTA ATAA TACAGT GGTTTTGTT 40 RIL182_RS14865 intergenic 3151247 3151527 - down ACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAA GTGAGTCAACATGCTTGCATGATTGACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAAATGGGTAACAAGACAAAACCGAAAA TTTTATTACTCCCTTTTTTTATTCGATTTACGGTGATTGTATCATTATCTATCTGCCAAAAAAAGGCACTTAAGCAAATATTAAGAAATCTTAAGTTTTCCATCCGTAAATCTTTCTTTTTTGTATTACTGTAATAATACAGT 143 TTerm_0436 NZ_LR027880.1 3151426 3151431 6 3151440 3151445 6 8 100 0 12 66 33 66 33 0 3151435 TGGTAT ATACCA True TCCGTATTT GTTTTCCCT False True + TGGTAT AATTTTGC ATACCA GTTTTCCCT 40 RIL182_RS14865 intergenic 3151247 3151527 - down ACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAA GTGAGTCAACATGCTTGCATGATTGACGAACGGTAAATTGGATCATGTGACGGTTTTGCACATGATACGATGAAAGAATACGGTAGATTCTAAAAGACAGGGAAAACTGGTATGCAAAATTATACCAAATACGGAAAAATGTCTTGACACTCCAACAAAACCACTGTATTATTACAGTAATACAAAAAAGAAAGATTTACGGATGGAAAACTTAAGATTTCTTAATATTTGCTTAAGTGCCTTTTTTTGGCAGATAGATAATGATACAATCACCGTAAATCGAATAAAAAAAGGGAGTAATAAAAATGGGTAACAAGACAAAACCGAAAA TTTTATTACTCCCTTTTTTTATTCGATTTACGGTGATTGTATCATTATCTATCTGCCAAAAAAAGGCACTTAAGCAAATATTAAGAAATCTTAAGTTTTCCATCCGTAAATCTTTCTTTTTTGTATTACTGTAATAATACAGTGGTTTTGTTGGAGTGTCAAGACATTTTTCCGTATTTGGTATAATTTTGCATACCA 198 TTerm_0437 NZ_LR027880.1 3166022 3166043 22 3166048 3166069 22 4 100 0 44 72 27 72 27 0 3166045 AAAAGAGGCATTTGAAAAATGA TCATTTTTCAAATGCCTCTTTT True GTGATTCCA CCTTCTTCC True True + AAAAGAGGCATTTGAAAAATGA AAAA TCATTTTTCAAATGCCTCTTTT CCTTCTTCC 96 RIL182_RS14920 intergenic 3165972 3166048 + down CCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAAT GTTTTATATGGGAGATCACCGTTAACCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAATCATTTTTCAAATGCCTCTTTTCCTT CCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAATCATTTTTCAAATGCCTCTTTT 97 TTerm_0438 NZ_LR027880.1 3166022 3166043 22 3166048 3166069 22 4 100 0 44 72 27 72 27 0 3166045 AAAAGAGGCATTTGAAAAATGA TCATTTTTCAAATGCCTCTTTT True GTGATTCCA CCTTCTTCC True True + AAAAGAGGCATTTGAAAAATGA AAAA TCATTTTTCAAATGCCTCTTTT CCTTCTTCC 96 RIL182_RS14925 intergenic 3165972 3166048 - down ATTTTTCATTTTTCAAATGCCTCTTTTGGAATCACAGATTACTTATAAGGTGTAAAAGATATGGCTGCTATAGAGG AAGGAAAAGAGGCATTTGAAAAATGATTTTTCATTTTTCAAATGCCTCTTTTGGAATCACAGATTACTTATAAGGTGTAAAAGATATGGCTGCTATAGAGGTTAACGGTGATCTCCCATATAAAAC CCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAATCATTTTTCAAATGCCTCTTTT 97 TTerm_0439 NZ_LR027880.1 3168311 3168338 28 3168348 3168375 28 9 75 0 21 66 33 66 33 0 3168342 AATAAATATAGGGCTGTTTTTTCAAAGG CCTTTTGAAATCCAGCCCCACATTTTTT True AGCTTATGA ATAAAATCT False True + AATAAATATAGGGCTGTTTTTTCAAAGG GTATTTTTA CCTTTTGAAATCCAGCCCCACATTTTTT ATAAAATCT 58 RIL182_RS14945 intergenic 3168291 3168374 - down AAAAATGTGGGGCTGGATTTCAAAAGGTAAAAATACCCTTTGAAAAAACAGCCCTATATTTATTCATAAGCTAGGAGAGAGAA CAAAGTGGACGACGAAGATTTTATAAAAAATGTGGGGCTGGATTTCAAAAGGTAAAAATACCCTTTGAAAAAACAGCCCTATATTTATTCATAAGCTAGGAGAGAGAAATGAAGCCGGATTATTATGAAGATT TTCTCTCTCCTAGCTTATGAATAAATATAGGGCTGTTTTTTCAAAGGGTATTTTTACCTTTTGAAATCCAGCCCCACATTTTTT 84 TTerm_0440 NZ_LR027880.1 3174152 3174161 10 3174168 3174177 10 6 90 0 15 75 25 77 22 0 3174164 AGTGTAAAAA TTTTCACACT True TTCTGTGCA ATATTTTCC False True + AGTGTAAAAA TCTCAT TTTTCACACT ATATTTTCC 38 RIL182_RS14970 intergenic 3174131 3174194 - down GATAAGCGGGAAAATATAGTGTGAAAAATGAGATTTTTACACTGCACAGAATGGAGGATTATT TTGGAATTGACCCATATACATGGTAGATAAGCGGGAAAATATAGTGTGAAAAATGAGATTTTTACACTGCACAGAATGGAGGATTATTATGTACGATGAAGCGGTAGTACAGT AATAATCCTCCATTCTGTGCAGTGTAAAAATCTCATTTTTCACACT 46 TTerm_0441 NZ_LR027880.1 3182243 3182251 9 3182257 3182265 9 5 88 0 13 88 11 87 12 0 3182253 AAATATTGT ACATTATTT True CAATCTTAA CTTTTGAAA True True + AAATATTGT ATCAC ACATTATTT CTTTTGAAA 34 RIL182_RS14985 intergenic 3182215 3182310 - down AATGCACTATTTGACTCCAACCCGCAGGATAACATTTTTCAAAAGAAATAATGTGTGATACAATATTTTAAGATTGAATTTTCAGGAGAAAACAG AAAAATTTGTCAATCAAGAAGTTTAAATGCACTATTTGACTCCAACCCGCAGGATAACATTTTTCAAAAGAAATAATGTGTGATACAATATTTTAAGATTGAATTTTCAGGAGAAAACAGATGTCCCTACAATTTATATTTGGCA CTGTTTTCTCCTGAAAATTCAATCTTAAAATATTGTATCACACATTATTT 50 TTerm_0442 NZ_LR027880.1 3210397 3210415 19 3210421 3210439 19 5 73 0 13 78 21 85 14 0 3210417 CATATATTTCGGTAAAAAA TTTTTTTTGGAAAAATGTG True ACAGCTTTC TATTTTTTA False True + CATATATTTCGGTAAAAAA GTGTA TTTTTTTTGGAAAAATGTG TATTTTTTA 26 RIL182_RS15140 intergenic 3210260 3210446 - down AAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAA CGGTAAGAACAGAAAGCAGTTCATAAAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAAATGAAAAGAAAATTGGTGAGTATGG TTCAAAAACCTCCCATAGTTTTTTTAGATTTGGTTTCGTTGCTAACCATGGTCTAATTATAACTGTGAGAGGTTTTTATGAATACCGAATTAAATTTGAATTAAGTATAATTTTTTACTAAATTGTGAACAGCTTTCATATATTTCGGTAAAAAAGTGTATTTTTTTTGGAAAAATGTG 179 TTerm_0443 NZ_LR027880.1 3210420 3210425 6 3210431 3210436 6 5 100 0 12 100 0 100 0 0 3210427 ATTTTT AAAAAT True AAAAGTGTA GTGTATTTT True True + ATTTTT TTTGG AAAAAT GTGTATTTT 24 RIL182_RS15140 intergenic 3210260 3210446 - down AAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAA CGGTAAGAACAGAAAGCAGTTCATAAAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAAATGAAAAGAAAATTGGTGAGTATGG TTCAAAAACCTCCCATAGTTTTTTTAGATTTGGTTTCGTTGCTAACCATGGTCTAATTATAACTGTGAGAGGTTTTTATGAATACCGAATTAAATTTGAATTAAGTATAATTTTTTACTAAATTGTGAACAGCTTTCATATATTTCGGTAAAAAAGTGTATTTTTTTTGGAAAAAT 176 TTerm_0444 NZ_LR027880.1 3220013 3220018 6 3220025 3220030 6 6 100 0 12 100 0 100 0 0 3220021 ATAATA TATTAT True AATTATATA CTGTCTTTT False True + ATAATA CATGTA TATTAT CTGTCTTTT 24 RIL182_RS15160 intergenic 3219864 3220198 - down GATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAG ATGATCTGGCAGGCATGGAAGCATAGATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAGATGAAAGAGCAGAAATTAGACCGTT CTTCAACTTCCTTTCTCCATCCACTCATCTGTCTTTGCCTGAAAAACAGTTGTCTTTTGTCGGATTTGTTATGTATTAATATACAACTTTCATATCCGTTTGTCTACCTGTTTTTTCTTCATATTATCTGATAATATGATAATTATATATAATACATGTATATTAT 166 TTerm_0445 NZ_LR027880.1 3220090 3220105 16 3220111 3220126 16 5 93 0 27 78 21 80 20 0 3220107 AAGATGCAAAAAAATT AATTTTTCTGCATCTT True ATAGAAAAA CGCATTTTT True True + AAGATGCAAAAAAATT TCATT AATTTTTCTGCATCTT CGCATTTTT 54 RIL182_RS15160 intergenic 3219864 3220198 - down GATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAG ATGATCTGGCAGGCATGGAAGCATAGATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAGATGAAAGAGCAGAAATTAGACCGTT CTTCAACTTCCTTTCTCCATCCACTCATCTGTCTTTGCCTGAAAAACAGTTGTCTTTTGTCGGATTTGTTATGTATTAATATACAACTTTCATATCCGTTTGTCTACCTGTTTTTTCTTCATATTATCTGATAATATGATAATTATATATAATACATGTATATTATCTGTCTTTTTTATTTATTTTCTCTTAAAATAATATCCATACAAACAATTCAATAGAAAAAAGATGCAAAAAAATTTCATTAATTTTTCTGCATCTT 262 TTerm_0446 NZ_LR027880.1 3228655 3228667 13 3228672 3228684 13 4 100 0 26 61 38 61 38 0 3228669 AAAACTGGGTACA TGTACCCAGTTTT True GACGAACAA ATTTTAAAT True True + AAAACTGGGTACA TCAC TGTACCCAGTTTT ATTTTAAAT 76 RIL182_RS15200 intergenic 3228573 3228718 - down ATTCGGTAAAATTAAACAGAACATCATTTAAAATAAAACTGGGTACAGTGATGTACCCAGTTTTTGTTCGTCAGTAAGGATGAAATTATAGATCGGATGATGGGTGGAACTAGACGAAGGGGAGATATCGGAAAGGAAATAGATT AAACAGAATTGACAATTACCAACTAATTCGGTAAAATTAAACAGAACATCATTTAAAATAAAACTGGGTACAGTGATGTACCCAGTTTTTGTTCGTCAGTAAGGATGAAATTATAGATCGGATGATGGGTGGAACTAGACGAAGGGGAGATATCGGAAAGGAAATAGATTATGATTTCAAACCATAAAATACAGA AATCTATTTCCTTTCCGATATCTCCCCTTCGTCTAGTTCCACCCATCATCCGATCTATAATTTCATCCTTACTGACGAACAAAAACTGGGTACATCACTGTACCCAGTTTT 111 TTerm_0447 NZ_LR027880.1 3260460 3260466 7 3260471 3260477 7 4 100 0 14 100 0 100 0 0 3260468 AATTTTT AAAAATT True CAAAATCCA TTTTCATTT True True + AATTTTT AGCG AAAAATT TTTTCATTT 28 RIL182_RS15360 intergenic 3260355 3260563 - down AGGCATTTGAAAACATAAATGGCAGAAAATAGAAAATTCCATAAGTTCCTGGAATGATAAAAATAACCTCCGCTTATAAATGAAAAAATTTTTCGCTAAAAATTGGATTTTGGGTGAAATACGGCGAAAATTGCATTGACGGAAAAATTTCTCTATGCTAAATTTACTCATGTATTTCTATCAAGTAGTGATACAGGAGGATGAAAAA GAGGAATTATAAAAATCTTTCGTTAAGGCATTTGAAAACATAAATGGCAGAAAATAGAAAATTCCATAAGTTCCTGGAATGATAAAAATAACCTCCGCTTATAAATGAAAAAATTTTTCGCTAAAAATTGGATTTTGGGTGAAATACGGCGAAAATTGCATTGACGGAAAAATTTCTCTATGCTAAATTTACTCATGTATTTCTATCAAGTAGTGATACAGGAGGATGAAAAAATGAAGAAAGCATTAAGCGTATTAT TTTTTCATCCTCCTGTATCACTACTTGATAGAAATACATGAGTAAATTTAGCATAGAGAAATTTTTCCGTCAATGCAATTTTCGCCGTATTTCACCCAAAATCCAATTTTTAGCGAAAAATT 122 TTerm_0448 NZ_LR027880.1 3270340 3270350 11 3270356 3270366 11 5 100 0 22 54 45 54 45 0 3270352 AAACCACAGGT ACCTGTGGTTT True TGGAACATA TTTGTTGTC False True + AAACCACAGGT TATAT ACCTGTGGTTT TTTGTTGTC 68 RIL182_RS15415 intergenic 3270291 3270463 + down TCACAGATCAGATGTCATACCATTTACGGTGTCACATAGATGGAACATAAACCACAGGTTATATACCTGTGGTTTTTTGTTGTCCTTTTATTGTGGTGCCCTGATCAAAAGATGTATCGAAAAATAAACTGCCTGCATTTCTGACACATCTTTCGCCCCGGAACCCGTTTTC AACATTAAAACCATACTTAATCTAATCACAGATCAGATGTCATACCATTTACGGTGTCACATAGATGGAACATAAACCACAGGTTATATACCTGTGGTTTTTTGTTGTCCTTTTATTGTGGTGCCCTGATCAAAAGATGTATCGAAAAATAAACTGCCTGCATTTCTGACACATCTTTCGCCCCGGAACCCGTTTTCTACGCTTCGATATGGATCACTTCGA TCACAGATCAGATGTCATACCATTTACGGTGTCACATAGATGGAACATAAACCACAGGTTATATACCTGTGGTTT 75 TTerm_0449 NZ_LR027880.1 3270340 3270350 11 3270356 3270366 11 5 100 0 22 54 45 54 45 0 3270352 AAACCACAGGT ACCTGTGGTTT True TGGAACATA TTTGTTGTC False True + AAACCACAGGT TATAT ACCTGTGGTTT TTTGTTGTC 68 RIL182_RS15420 intergenic 3270291 3270463 - down GAAAACGGGTTCCGGGGCGAAAGATGTGTCAGAAATGCAGGCAGTTTATTTTTCGATACATCTTTTGATCAGGGCACCACAATAAAAGGACAACAAAAAACCACAGGTATATAACCTGTGGTTTATGTTCCATCTATGTGACACCGTAAATGGTATGACATCTGATCTGTGA TCGAAGTGATCCATATCGAAGCGTAGAAAACGGGTTCCGGGGCGAAAGATGTGTCAGAAATGCAGGCAGTTTATTTTTCGATACATCTTTTGATCAGGGCACCACAATAAAAGGACAACAAAAAACCACAGGTATATAACCTGTGGTTTATGTTCCATCTATGTGACACCGTAAATGGTATGACATCTGATCTGTGATTAGATTAAGTATGGTTTTAATGTT TCACAGATCAGATGTCATACCATTTACGGTGTCACATAGATGGAACATAAACCACAGGTTATATACCTGTGGTTT 75 TTerm_0450 NZ_LR027880.1 3282978 3282993 16 3282998 3283013 16 4 87 0 22 56 43 57 42 0 3282995 AAAACAGACAGAACCA TGGTTCTGCCCGTTTT True AATATGCTA TATTTTACC True True + AAAACAGACAGAACCA AAGG TGGTTCTGCCCGTTTT TATTTTACC 68 RIL182_RS15485 intergenic 3282929 3283031 - down AGATTTAATGGTAAAATAAAAACGGGCAGAACCACCTTTGGTTCTGTCTGTTTTAGCATATTAAAACAAAAGAATGATCCACAATGGTGGACAGGAGACGAA CTATGGAGCGGATCCAGACACTGTAAGATTTAATGGTAAAATAAAAACGGGCAGAACCACCTTTGGTTCTGTCTGTTTTAGCATATTAAAACAAAAGAATGATCCACAATGGTGGACAGGAGACGAAATGGAATACTGTAAATTACAGATTG TTCGTCTCCTGTCCACCATTGTGGATCATTCTTTTGTTTTAATATGCTAAAACAGACAGAACCAAAGGTGGTTCTGCCCGTTTT 84 TTerm_0451 NZ_LR027880.1 3287673 3287685 13 3287690 3287702 13 4 100 0 26 53 46 53 46 0 3287687 AAAAGCTGCAGTG CACTGCAGCTTTT True CAAACCAAA CGCTTACAT True True + AAAAGCTGCAGTG TCTC CACTGCAGCTTTT CGCTTACAT 84 RIL182_RS15505 intergenic 3287187 3287715 - down GTAGATGTAAGCGAAAAGCTGCAGTGGAGACACTGCAGCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGC CAAAAGTAAAAGAGTTAGTAAAATAGTAGATGTAAGCGAAAAGCTGCAGTGGAGACACTGCAGCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCATGGACACAAGTAGTCTAATGGAGC GCGTTCTTTCCTTTCCGTCCCGCTTGATTTGACCATCTTTTACCCGATTGGTTACGGCAGATGTTATCTCTTCTGCAATACGAGACATACTCAAACTTATTGATTGTTCGCCCCTTTGCTCTATCTCCATTACAGAGACTTCTTCACTACTATGGGCTCGGCTGACTTCTCACAGTTCGTTGTTACTAGGCTAATGAAACCCCTGTGAGACCTCCACGCTTAAGGTGCACGCTCTTTCCTCTCATCTATCCGCCACATCTACTCGTACTTCCAGCAACTTTAGGACTTCATCTCTTTTGGCAGACTTATCCGTATTTCCGAGCCTTATATGTGATTTCTGTCCGTCGGACCAAGAGTTTGCTTACAGCTTCCTTCAGATTCCACCTCACGATGGACACCCTTGCTGTTCTGCTATACACTTCCTCGTTGCCTAGGCGTGTTCGGGACTTTCACCCATTAGAGCGCGCCCATGGCGCGCAAACCAAAAAAGCTGCAGTGTCTCCACTGCAGCTTTT 515 TTerm_0452 NZ_LR027880.1 3288163 3288170 8 3288179 3288186 8 8 87 0 11 81 18 85 14 0 3288174 AAGTTTGT ACAAATTT True TATCACATA TATTTTTAT False True + AAGTTTGT GATTGTAA ACAAATTT TATTTTTAT 30 RIL182_RS15510 intergenic 3288068 3288198 - down AAAATAAAAATAAAATTTGTTTACAATCACAAACTTATGTGATATACTATAACAGTTGTGAATAAAAATAGATGGTCCTCTGTTACGAATTCGCGTATTAAGAACATCCAAATTATCAGGAGGTCACAAA AAAAAGAGCGGAAAAAGTGGCGTTAAAAATAAAAATAAAATTTGTTTACAATCACAAACTTATGTGATATACTATAACAGTTGTGAATAAAAATAGATGGTCCTCTGTTACGAATTCGCGTATTAAGAACATCCAAATTATCAGGAGGTCACAAAATGAACGCAAGTGAAATCATTAAGA TTTGTGACCTCCTGATAATTTGGATGTTCTTAATACGCGAATTCGTAACAGAGGACCATCTATTTTTATTCACAACTGTTATAGTATATCACATAAGTTTGTGATTGTAAACAAATTT 118 TTerm_0453 NZ_LR027880.1 3289465 3289470 6 3289477 3289482 6 6 100 0 12 83 16 83 16 0 3289473 TGAAAA TTTTCA True CCTGCGTGT TAAAATTTT False True + TGAAAA ATCTTA TTTTCA TAAAATTTT 32 RIL182_RS15520 intergenic 3289444 3289500 - down ACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTT AGAATGTTGTAATCTGGATCAAATAACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTTATGGAGAATTTACTTCAGGTAGGTG AAAATCTCCATTCCTGCGTGTGAAAAATCTTATTTTCA 38 TTerm_0454 NZ_LR027880.1 3289465 3289477 13 3289482 3289494 13 4 92 0 21 88 11 91 8 0 3289479 TGAAAAATCTTAT ATAAAATTTTTCA True CCTGCGTGT TTCTGTTAT True True + TGAAAAATCTTAT TTTC ATAAAATTTTTCA TTCTGTTAT 42 RIL182_RS15520 intergenic 3289444 3289500 - down ACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTT AGAATGTTGTAATCTGGATCAAATAACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTTATGGAGAATTTACTTCAGGTAGGTG AAAATCTCCATTCCTGCGTGTGAAAAATCTTATTTTCATAAAATTTTTCA 50 TTerm_0455 NZ_LR027880.1 3293214 3293234 21 3293243 3293263 21 8 95 0 37 78 21 80 20 0 3293238 TAACAAATAAGGAATTTCGTT AACGAAATTCCTTATTTTTTA True CTGTTTCAT ACCATTTTT False True + TAACAAATAAGGAATTTCGTT TTGCAATG AACGAAATTCCTTATTTTTTA ACCATTTTT 90 RIL182_RS15545 intergenic 3293157 3293310 + down CACTGACTATTTGGCCGCATACGCCGGACCACATATTGTACGAGCATACTGTTTCATAACAAATAAGGAATTTCGTTTTGCAATGAACGAAATTCCTTATTTTTTAACCATTTTTCATTTTATGATCCGGTTCTGATATCCGAAACGCAATTC AGGTCAGTCTTACACAGTATCCTGACACTGACTATTTGGCCGCATACGCCGGACCACATATTGTACGAGCATACTGTTTCATAACAAATAAGGAATTTCGTTTTGCAATGAACGAAATTCCTTATTTTTTAACCATTTTTCATTTTATGATCCGGTTCTGATATCCGAAACGCAATTCTACAGACTTGCTCTGACTAATTTCG CACTGACTATTTGGCCGCATACGCCGGACCACATATTGTACGAGCATACTGTTTCATAACAAATAAGGAATTTCGTTTTGCAATGAACGAAATTCCTTATTTTTTA 106 TTerm_0456 NZ_LR027880.1 3293214 3293234 21 3293243 3293263 21 8 95 0 37 78 21 80 20 0 3293238 TAACAAATAAGGAATTTCGTT AACGAAATTCCTTATTTTTTA True CTGTTTCAT ACCATTTTT False True + TAACAAATAAGGAATTTCGTT TTGCAATG AACGAAATTCCTTATTTTTTA ACCATTTTT 90 RIL182_RS15550 intergenic 3293157 3293310 - down GAATTGCGTTTCGGATATCAGAACCGGATCATAAAATGAAAAATGGTTAAAAAATAAGGAATTTCGTTCATTGCAAAACGAAATTCCTTATTTGTTATGAAACAGTATGCTCGTACAATATGTGGTCCGGCGTATGCGGCCAAATAGTCAGTG CGAAATTAGTCAGAGCAAGTCTGTAGAATTGCGTTTCGGATATCAGAACCGGATCATAAAATGAAAAATGGTTAAAAAATAAGGAATTTCGTTCATTGCAAAACGAAATTCCTTATTTGTTATGAAACAGTATGCTCGTACAATATGTGGTCCGGCGTATGCGGCCAAATAGTCAGTGTCAGGATACTGTGTAAGACTGACCT CACTGACTATTTGGCCGCATACGCCGGACCACATATTGTACGAGCATACTGTTTCATAACAAATAAGGAATTTCGTTTTGCAATGAACGAAATTCCTTATTTTTTA 106 TTerm_0457 NZ_LR027880.1 3299815 3299838 24 3299845 3299868 24 6 79 0 23 64 35 68 31 0 3299841 CAGGGGCTTTTTTCTACCTTACTG CAGTAAAATATAAAAAAGACTCTG True CTCCTGGTC TTTTCTTAT False True + CAGGGGCTTTTTTCTACCTTACTG TGTATC CAGTAAAATATAAAAAAGACTCTG TTTTCTTAT 62 RIL182_RS15570 intergenic 3299800 3299966 - down AATAAAAGATGACGTATGCCCTTGTTGAAGACAAAAGGGCGGTGCGCGATGTACCGTCTCTTGTCAGGCAAGGGCTTTTCCGTTATTATATAAGAAAACAGAGTCTTTTTTATATTTTACTGGATACACAGTAAGGTAGAAAAAAGCCCCTGACCAGGAGGATGAA AGCAGATCAAGAATGCTTTAAACTAAATAAAAGATGACGTATGCCCTTGTTGAAGACAAAAGGGCGGTGCGCGATGTACCGTCTCTTGTCAGGCAAGGGCTTTTCCGTTATTATATAAGAAAACAGAGTCTTTTTTATATTTTACTGGATACACAGTAAGGTAGAAAAAAGCCCCTGACCAGGAGGATGAAATGTCAAAGTTACAGGAATTGCAGA TTCATCCTCCTGGTCAGGGGCTTTTTTCTACCTTACTGTGTATCCAGTAAAATATAAAAAAGACTCTG 68 TTerm_0458 NZ_LR027880.1 3303025 3303041 17 3303050 3303066 17 8 94 0 29 61 38 62 37 0 3303045 AAAACAGGTTTGTCAAG CTTGACAACCCTGTTTT True ACATAGTGA TTTATTTTT True True + AAAACAGGTTTGTCAAG TATTTTTT CTTGACAACCCTGTTTT TTTATTTTT 82 RIL182_RS15595 intergenic 3302948 3303111 - down GGCAAAACAGCGGGTCTTTGAGGTTCATAGACGATGAAAAATAAAAAAACAGGGTTGTCAAGAAAAAATACTTGACAAACCTGTTTTCACTATGTATAATCATTTAGGTGTGAAAAGCCTAGATAAAAGGTTTGATTCACAAAAAAAGATATAGGAGAATGCC GAGAGACGGTTGCACTTGTAAAATAGGCAAAACAGCGGGTCTTTGAGGTTCATAGACGATGAAAAATAAAAAAACAGGGTTGTCAAGAAAAAATACTTGACAAACCTGTTTTCACTATGTATAATCATTTAGGTGTGAAAAGCCTAGATAAAAGGTTTGATTCACAAAAAAAGATATAGGAGAATGCCGTGATTATAGATATTTCAGACATTT GGCATTCTCCTATATCTTTTTTTGTGAATCAAACCTTTTATCTAGGCTTTTCACACCTAAATGATTATACATAGTGAAAACAGGTTTGTCAAGTATTTTTTCTTGACAACCCTGTTTT 118 TTerm_0459 NZ_LR027880.1 3325266 3325283 18 3325288 3325304 17 4 88 5 19 65 34 62 37 0 3325285 GCCAGAAAAGAATTAAGT ACTTAAACTTTTCTGGC True GAAAAAGAG ATAAAAAAA True True + GCCAGAAAAGAATTAAGT TATC ACTTAAACTTTTCTGGC ATAAAAAAA 46 RIL182_RS15665 intergenic 3325281 3325314 + down GTTATCACTTAAACTTTTCTGGCATAAAAAAAA AGAAAAAGAGCCAGAAAAGAATTAAGTTATCACTTAAACTTTTCTGGCATAAAAAAAAGCTGCTGACGGGAATCGGACCCGTG GTTATCACTTAAACTTTTCTGGC 23 TTerm_0460 NZ_LR027880.1 3325266 3325283 18 3325288 3325304 17 4 88 5 19 65 34 62 37 0 3325285 GCCAGAAAAGAATTAAGT ACTTAAACTTTTCTGGC True GAAAAAGAG ATAAAAAAA True True + GCCAGAAAAGAATTAAGT TATC ACTTAAACTTTTCTGGC ATAAAAAAA 46 RIL182_RS15670 intergenic 3325281 3325314 - down TTTTTTTTATGCCAGAAAAGTTTAAGTGATAAC CACGGGTCCGATTCCCGTCAGCAGCTTTTTTTTATGCCAGAAAAGTTTAAGTGATAACTTAATTCTTTTCTGGCTCTTTTTCT GTTATCACTTAAACTTTTCTGGC 23 TTerm_0461 NZ_LR027880.1 3328698 3328709 12 3328714 3328725 12 4 100 0 24 66 33 66 33 0 3328711 AAAAAAGACAGC GCTGTCTTTTTT True TGTACAACA AGGAGAAGG True True + AAAAAAGACAGC CACT GCTGTCTTTTTT AGGAGAAGG 80 RIL182_RS15685 intergenic 3328407 3328914 - down GAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGT CGAATCCTGAAATAGGGAAGATGTAGAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGTATGGAACAGTATACCACACAGATGG ACGTTTTTCTCCTTTTTCGCATGGGGGACTGCTTGAACCACTGTCTGGCAAACGAATTCTCCACGTCAAAAAATCTCCTGCCGCAAGCGCGACAGGAGATAGCATCTTCCCAATACGCTCCCTACGACAGTATTAACTGACAGGTTCAAAGAGTCAGGTTTTAACCTTCTCAACTGCAATCCCTCCGGGCATTCTCCCGGACATGCAGTCCCTCTGCGTTGTTTTCTATTAAGTTTTATCGACTTGTTCAGTCTAGCCTAATCTGTGACGGTTGTCAATATTTGTACAACAAAAAAGACAGCCACTGCTGTCTTTTTT 318 TTerm_0462 NZ_LR027880.1 3332334 3332342 9 3332348 3332356 9 5 100 0 18 55 44 55 44 0 3332344 AATCCTCTG CAGAGGATT True AAAATGCGA TTACTCCTT True True + AATCCTCTG ATGAG CAGAGGATT TTACTCCTT 68 RIL182_RS15705 intergenic 3332297 3332388 - down AATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAA GTGCTGATGCACAAAAAACAAAATAAATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAAATGGAAAATAAATTTCAATTTTACA TTAAATAATCCTCCTTGTTTTGCGAAGCAAAATGCGAATCCTCTGATGAGCAGAGGATT 59 TTerm_0463 NZ_LR027880.1 3332375 3332382 8 3332390 3332397 8 7 100 0 16 87 12 87 12 0 3332385 AACAAAAT ATTTTGTT True TTTTGCGGA TTTTGTGCA False True + AACAAAAT GCAATTT ATTTTGTT TTTTGTGCA 40 RIL182_RS15705 intergenic 3332297 3332388 - down AATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAA GTGCTGATGCACAAAAAACAAAATAAATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAAATGGAAAATAAATTTCAATTTTACA TTAAATAATCCTCCTTGTTTTGCGAAGCAAAATGCGAATCCTCTGATGAGCAGAGGATTTTACTCCTTGTTTTGCGGAACAAAATGCAATTTATTTTGTT 100 TTerm_0464 NZ_LR027880.1 3338000 3338007 8 3338014 3338021 8 6 87 0 11 81 18 85 14 0 3338010 AAAATATG CATATCTT True AATTCACCA ATTTTTATG False True + AAAATATG GTTTAT CATATCTT ATTTTTATG 38 RIL182_RS15720 intergenic 3337889 3338204 - down GAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGATAAAATATAAAATGTATTGACACGATCATAAAAATAAGATATGATAAACCATATTTTGGTGAATTGAAATGAGACTCAGATATATTTTTTGTAAGGACATCAAGGGATATTCAAAGCAAAGATATATGCTGGGTCTTTTTATGTACAAAAGAAGGGAAAATGAGTTT AGATTTTATGTGAAAAAGGCGGATAGAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGATAAAATATAAAATGTATTGACACGATCATAAAAATAAGATATGATAAACCATATTTTGGTGAATTGAAATGAGACTCAGATATATTTTTTGTAAGGACATCAAGGGATATTCAAAGCAAAGATATATGCTGGGTCTTTTTATGTACAAAAGAAGGGAAAATGAGTTTATGAAAAAAAGGATGATACGTTTCT AAACTCATTTTCCCTTCTTTTGTACATAAAAAGACCCAGCATATATCTTTGCTTTGAATATCCCTTGATGTCCTTACAAAAAATATATCTGAGTCTCATTTCAATTCACCAAAATATGGTTTATCATATCTT 132 TTerm_0465 NZ_LR027880.1 3339535 3339560 26 3339568 3339593 26 7 76 0 22 57 42 55 45 0 3339563 AAAATTGATATCCCCTGCTTTGCCTG CAGGCAGAACAGGGGCTTTTATTTTT True TGATACCCA TAAAGCGAA True True + AAAATTGATATCCCCTGCTTTGCCTG GAATTCA CAGGCAGAACAGGGGCTTTTATTTTT TAAAGCGAA 76 RIL182_RS15730 intergenic 3339397 3339627 - down AAAGTATAAATAAAATATCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTAT GTCCCGGACGTGCCTGTGGAAGATAAAAGTATAAATAAAATATCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGC ATAAGTTAGCAGTTTCTTCAATGCTAATTTTTCATTCAGGACACCTTCTTTCGTATGTTTTGTTCCATAACATAATTATACAATAAAAGGTGTCCTTTTTGAGTGATTATACAGAAAAAAACAGTAATTTGATACCCAAAATTGATATCCCCTGCTTTGCCTGGAATTCACAGGCAGAACAGGGGCTTTTATTTTT 196 TTerm_0466 NZ_LR027880.1 3365222 3365235 14 3365241 3365254 14 5 85 0 18 60 39 58 41 0 3365237 AGCAGATCTGTCTT AAGACAAAACTGCT True ATTTTTGCA TTTATTATG False True + AGCAGATCTGTCTT TTTCT AAGACAAAACTGCT TTTATTATG 52 RIL182_RS15840 intergenic 3365192 3365297 - down ATCGATACGATTATCGCTCTGCATGGGGCAGAGTCATAATAAAAGCAGTTTTGTCTTAGAAAAAGACAGATCTGCTGCAAAAATAAATCATATGGAGGGTATGGT TTACCGTTGGAGCCGTAAAAGGCTGATCGATACGATTATCGCTCTGCATGGGGCAGAGTCATAATAAAAGCAGTTTTGTCTTAGAAAAAGACAGATCTGCTGCAAAAATAAATCATATGGAGGGTATGGTATGAAGAAAAGATTTAAGAGACTTG ACCATACCCTCCATATGATTTATTTTTGCAGCAGATCTGTCTTTTTCTAAGACAAAACTGCT 62 TTerm_0467 NZ_LR027880.1 3365276 3365286 11 3365291 3365301 11 4 81 0 12 50 50 44 55 0 3365288 GCAGAGCGATA TATCGATCAGC True TGCCCCATG CTTTTACGG False True + GCAGAGCGATA ATCG TATCGATCAGC CTTTTACGG 40 RIL182_RS15840 intergenic 3365192 3365297 - down ATCGATACGATTATCGCTCTGCATGGGGCAGAGTCATAATAAAAGCAGTTTTGTCTTAGAAAAAGACAGATCTGCTGCAAAAATAAATCATATGGAGGGTATGGT TTACCGTTGGAGCCGTAAAAGGCTGATCGATACGATTATCGCTCTGCATGGGGCAGAGTCATAATAAAAGCAGTTTTGTCTTAGAAAAAGACAGATCTGCTGCAAAAATAAATCATATGGAGGGTATGGTATGAAGAAAAGATTTAAGAGACTTG ACCATACCCTCCATATGATTTATTTTTGCAGCAGATCTGTCTTTTTCTAAGACAAAACTGCTTTTATTATGACTCTGCCCCATGCAGAGCGATAATCGTATCGATCAGC 109 TTerm_0468 NZ_LR027880.1 3378297 3378303 7 3378312 3378318 7 8 100 0 14 14 85 14 85 0 3378307 CAGGGCG CGCCCTG True AGCAAAAAC CCAGATTTT True True + CAGGGCG CCATGCGA CGCCCTG CCAGATTTT 68 RIL182_RS15895 intergenic 3378268 3378331 - down AGTAAAAATCTGGCAGGGCGTCGCATGGCGCCCTGTTTTTGCTTACTTATTGGAAAATATATT AAGTTGAAGAAGTGTCAGAAGAATAAGTAAAAATCTGGCAGGGCGTCGCATGGCGCCCTGTTTTTGCTTACTTATTGGAAAATATATTATGGGGGAAAATATGGGAGAGGAAG AATATATTTTCCAATAAGTAAGCAAAAACAGGGCGCCATGCGACGCCCTG 50 TTerm_0469 NZ_LR027880.1 3409954 3409963 10 3409969 3409978 10 5 90 0 15 95 5 100 0 0 3409965 AAAAAAATAT ATATTGTTTT True CTATGCGAA ATTTTTTCT True True + AAAAAAATAT CTGCC ATATTGTTTT ATTTTTTCT 38 RIL182_RS16010 intergenic 3409935 3409990 + down CGAAGGAACACTATGCGAAAAAAAATATCTGCCATATTGTTTTATTTTTTCTTTT CCCATTTTTATATTTCAGATTTTAACGAAGGAACACTATGCGAAAAAAAATATCTGCCATATTGTTTTATTTTTTCTTTTTGATAAGCTGCCTTCTGATTCCACT CGAAGGAACACTATGCGAAAAAAAATATCTGCCATATTGTTTT 43 TTerm_0470 NZ_LR027880.1 3438332 3438341 10 3438350 3438359 10 8 90 0 15 95 5 100 0 0 3438345 AAAAAAGTTT AAATTTTTTT True TAATAGTGA TCACGTTTC True True + AAAAAAGTTT CATAAAAA AAATTTTTTT TCACGTTTC 30 RIL182_RS21995 intergenic 3438259 3438360 - down AAAAAAAATTTTTTTTATGAAACTTTTTTCACTATTATTTTATCTAAATAAATGAAACTTACAAATGATAAGTAATAAGAACACGCAGGAGGATATTCAGA TGAACCTGCAGAACGAGGAAACGTGAAAAAAAATTTTTTTTATGAAACTTTTTTCACTATTATTTTATCTAAATAAATGAAACTTACAAATGATAAGTAATAAGAACACGCAGGAGGATATTCAGAATGAGAAAAAAAACAATTTATGTAT TCTGAATATCCTCCTGCGTGTTCTTATTACTTATCATTTGTAAGTTTCATTTATTTAGATAAAATAATAGTGAAAAAAGTTTCATAAAAAAAATTTTTTT 100 TTerm_0471 NZ_LR027880.1 3444668 3444676 9 3444681 3444689 9 4 100 0 18 22 77 22 77 0 3444678 AGCCGGTGC GCACCGGCT True TAATGAATA CCCTCTTTT False True + AGCCGGTGC TGTT GCACCGGCT CCCTCTTTT 76 RIL182_RS16170 intergenic 3444327 3444714 - down AAAGAAAATATTTATAAAAAGAGGGAGCCGGTGCAACAGCACCGGCTATTCATTATGAAAAAGAGTGTGTATGAAAAGTGAAGTAATTCACTATTTGCTGGGAGGAACCTTGCTTATCGGATAAGCAAGGCTACCTGACTTACATCAGGTATGAAAAAAAGTTCTATGAAAAATTTTAACTTGTTGCCTTAACTTTGAATTTAGTATATCGGGGAATTGTGACCGCCGTATGCCCTGTTTGTGAGAATTATGTAAATAAAATATGAACAACTACATACTTTGGCAGAAATTAAGAATATCTAAAGAAAAATTTGATTGGTTTGCGGTAGGAAAATGTGTATAATAGAATGGCTATGGTAAAACAAAGTGGAAAACAAGGAGGATTAC TTCTTGGAAATGAAAAGAAAGCTTAAAAGAAAATATTTATAAAAAGAGGGAGCCGGTGCAACAGCACCGGCTATTCATTATGAAAAAGAGTGTGTATGAAAAGTGAAGTAATTCACTATTTGCTGGGAGGAACCTTGCTTATCGGATAAGCAAGGCTACCTGACTTACATCAGGTATGAAAAAAAGTTCTATGAAAAATTTTAACTTGTTGCCTTAACTTTGAATTTAGTATATCGGGGAATTGTGACCGCCGTATGCCCTGTTTGTGAGAATTATGTAAATAAAATATGAACAACTACATACTTTGGCAGAAATTAAGAATATCTAAAGAAAAATTTGATTGGTTTGCGGTAGGAAAATGTGTATAATAGAATGGCTATGGTAAAACAAAGTGGAAAACAAGGAGGATTACATGTACGATTGTATCGTGATCGGCG GTAATCCTCCTTGTTTTCCACTTTGTTTTACCATAGCCATTCTATTATACACATTTTCCTACCGCAAACCAATCAAATTTTTCTTTAGATATTCTTAATTTCTGCCAAAGTATGTAGTTGTTCATATTTTATTTACATAATTCTCACAAACAGGGCATACGGCGGTCACAATTCCCCGATATACTAAATTCAAAGTTAAGGCAACAAGTTAAAATTTTTCATAGAACTTTTTTTCATACCTGATGTAAGTCAGGTAGCCTTGCTTATCCGATAAGCAAGGTTCCTCCCAGCAAATAGTGAATTACTTCACTTTTCATACACACTCTTTTTCATAATGAATAGCCGGTGCTGTTGCACCGGCT 362 TTerm_0472 NZ_LR027880.1 3448146 3448160 15 3448165 3448179 15 4 93 0 25 63 36 64 35 0 3448162 AAAAAAACGGGCTGA TCAGTCCGTTTTTTT True CATATCAAA GATATACTC True True + AAAAAAACGGGCTGA TAAT TCAGTCCGTTTTTTT GATATACTC 74 RIL182_RS16180 intergenic 3448132 3448333 + down AAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTTGATATACTCATATTCCAAATTTAATGTGCAGGTAATCTCTGATTACCTCTACGCATTTTTCACGCCCCCATCAAAACCGACACCACCGGCATCGTCACCACAGCAAGAATTGCCGTAAGCGCAACTCCTCTTGCCGCCAGATCATAATTTCCAT AGCTGCTGATTTAACAGATTTCTAAAAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTTGATATACTCATATTCCAAATTTAATGTGCAGGTAATCTCTGATTACCTCTACGCATTTTTCACGCCCCCATCAAAACCGACACCACCGGCATCGTCACCACAGCAAGAATTGCCGTAAGCGCAACTCCTCTTGCCGCCAGATCATAATTTCCATCATATTGCTGTCATACTGCCGACAG AAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTT 47 TTerm_0473 NZ_LR027880.1 3448146 3448160 15 3448165 3448179 15 4 93 0 25 63 36 64 35 0 3448162 AAAAAAACGGGCTGA TCAGTCCGTTTTTTT True CATATCAAA GATATACTC True True + AAAAAAACGGGCTGA TAAT TCAGTCCGTTTTTTT GATATACTC 74 RIL182_RS21380 intergenic 3448132 3448333 - down ATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTTTTTGATATGTTTTT CTGTCGGCAGTATGACAGCAATATGATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTTTTTGATATGTTTTTTTAGAAATCTGTTAAATCAGCAGCT AAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTT 47 TTerm_0474 NZ_LR027880.1 3448503 3448509 7 3448517 3448523 7 7 100 0 14 85 14 85 14 0 3448512 AATATAG CTATATT True TTGTATGTA TTTGTCAAT False True + AATATAG TCGATAG CTATATT TTTGTCAAT 36 RIL182_RS16185 intergenic 3448494 3448517 - down GCTATCGACTATATTACATACAA ACAGCGGGATATTGACAAAAATATAGCTATCGACTATATTACATACAAATGATAAAAATTATTGACAAAGGCG TTGTATGTAATATAGTCGATAGCTATATT 29 TTerm_0475 NZ_LR027880.1 3481219 3481232 14 3481240 3481252 13 7 92 7 16 70 29 69 30 0 3481235 AAAAAGATAAGAGG CCTCTTTCTTTTT True GTTGAGTCA AGATTATGA True True + AAAAAGATAAGAGG TTCTATG CCTCTTTCTTTTT AGATTATGA 56 RIL182_RS16310 intergenic 3481131 3481271 + down CTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTTAGATTATGAGTAATTTACC TCCTAATTCTGTTACTTTGAAATAACTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTTAGATTATGAGTAATTTACCTACTCAAAATAGTAGTATCCACCCG CTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTT 121 TTerm_0476 NZ_LR027880.1 3481219 3481232 14 3481240 3481252 13 7 92 7 16 70 29 69 30 0 3481235 AAAAAGATAAGAGG CCTCTTTCTTTTT True GTTGAGTCA AGATTATGA True True + AAAAAGATAAGAGG TTCTATG CCTCTTTCTTTTT AGATTATGA 56 RIL182_RS16315 intergenic 3481131 3481271 - down GGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTTTGACTCAACACACTACAACTGAAATCGAAGTTCAACAACAACTTATGTAGAAAAATATAACCGGGCGAAATCCGGGAGATTTCATCAG CGGGTGGATACTACTATTTTGAGTAGGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTTTGACTCAACACACTACAACTGAAATCGAAGTTCAACAACAACTTATGTAGAAAAATATAACCGGGCGAAATCCGGGAGATTTCATCAGTTATTTCAAAGTAACAGAATTAGGA CTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTT 121 TTerm_0477 NZ_LR027880.1 3483088 3483097 10 3483107 3483116 10 9 100 0 20 80 20 80 20 0 3483101 AAACAACATA TATGTTGTTT True ACGTCCGTA TCAATAATT False True + AAACAACATA CCATTTTTT TATGTTGTTT TCAATAATT 48 RIL182_RS16325 intergenic 3483044 3483278 - down AAAGTATGAATTTTGTCTGAATAAAAAAAGATAAATGTAGCATTCTGGCTGAAAATGTTTTATAATAAAACATGTATATGCGTTTTTCTTTGGAAAACAGGGGGATTGATAAAGAGAATCTCTGTTGTTGGGAAAAACATAAAAAAATAAAAAAATTATTGAAAACAACATAAAAAAATGGTATGTTGTTTACGGACGTAGTAATCACTGCGCGAGTGGAAAGGAGATTGGTTC GTGATGATGAGCAGGTTCTAGGCTAAAAGTATGAATTTTGTCTGAATAAAAAAAGATAAATGTAGCATTCTGGCTGAAAATGTTTTATAATAAAACATGTATATGCGTTTTTCTTTGGAAAACAGGGGGATTGATAAAGAGAATCTCTGTTGTTGGGAAAAACATAAAAAAATAAAAAAATTATTGAAAACAACATAAAAAAATGGTATGTTGTTTACGGACGTAGTAATCACTGCGCGAGTGGAAAGGAGATTGGTTCATGGATACGAACGATATTTCAGCAT GAACCAATCTCCTTTCCACTCGCGCAGTGATTACTACGTCCGTAAACAACATACCATTTTTTTATGTTGTTT 72 TTerm_0478 NZ_LR027880.1 3504263 3504278 16 3504286 3504301 16 7 87 0 22 56 43 57 42 0 3504281 AAAAGCACGGGTTTCC GGAAAAACGTGCTTTT True AAGTAACGA TTGCATAGC True True + AAAAGCACGGGTTTCC GGTTAGT GGAAAAACGTGCTTTT TTGCATAGC 60 RIL182_RS16400 intergenic 3504243 3504456 + down TTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTTTTGCATAGCTGCGGTTGATGACTGAGGGACGAAAAAAGGTGTGTCCGAGTGCTTTGGCGGCGCCGGATTCGCGGAACCCCGGGCTGTTTTGTGCAATTTGCCTTTCACTAACCCCGATACACCTTTTGTTCCAAACATCCAATCCCTATTTTCCC ACTACTCACGTATTTTATTGGTTGATTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTTTTGCATAGCTGCGGTTGATGACTGAGGGACGAAAAAAGGTGTGTCCGAGTGCTTTGGCGGCGCCGGATTCGCGGAACCCCGGGCTGTTTTGTGCAATTTGCCTTTCACTAACCCCGATACACCTTTTGTTCCAAACATCCAATCCCTATTTTCCCTACAACAATTTCCGGAATACCGGTA TTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTT 58 TTerm_0479 NZ_LR027880.1 3504263 3504278 16 3504286 3504301 16 7 87 0 22 56 43 57 42 0 3504281 AAAAGCACGGGTTTCC GGAAAAACGTGCTTTT True AAGTAACGA TTGCATAGC True True + AAAAGCACGGGTTTCC GGTTAGT GGAAAAACGTGCTTTT TTGCATAGC 60 RIL182_RS16405 intergenic 3504243 3504456 - down GGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTTTCGTTACTTTTAATAAAAAA TACCGGTATTCCGGAAATTGTTGTAGGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTTTCGTTACTTTTAATAAAAAATCAACCAATAAAATACGTGAGTAGT TTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTT 58 TTerm_0480 NZ_LR027880.1 3509779 3509792 14 3509797 3509810 14 4 85 0 18 82 17 83 16 0 3509794 AAAAAGCTGTAATT AATTACTTCTTTTT True CTTAAGGTA CCACTTTGC True True + AAAAAGCTGTAATT CATA AATTACTTCTTTTT CCACTTTGC 44 RIL182_RS16430 intergenic 3509663 3509799 - down ATTTATGAATTACAGCTTTTTACCTTAAGGTTTTCTTAAAACGTGAAAATAAGATAGTAAAAAAGTCTTAAAAAGTGGTATAATAACAGAAACGGTGCAAAAGAGCACAAAATAATTACGTTGAGAGGTATTTAGT TGTATGCAAAGTGGAAAAAGAAGTAATTTATGAATTACAGCTTTTTACCTTAAGGTTTTCTTAAAACGTGAAAATAAGATAGTAAAAAAGTCTTAAAAAGTGGTATAATAACAGAAACGGTGCAAAAGAGCACAAAATAATTACGTTGAGAGGTATTTAGTTTGAAGAAAAGAGCGATTTTAATGC ACTAAATACCTCTCAACGTAATTATTTTGTGCTCTTTTGCACCGTTTCTGTTATTATACCACTTTTTAAGACTTTTTTACTATCTTATTTTCACGTTTTAAGAAAACCTTAAGGTAAAAAGCTGTAATTCATAAATTACTTCTTTTT 147 TTerm_0481 NZ_LR027880.1 3514904 3514920 17 3514929 3514945 17 8 94 0 29 55 44 56 43 0 3514924 AAAAACGGCTCCACATC GATGTGAAGCCGTTTTT True GCAAGACCA CTTATACAA True True + AAAAACGGCTCCACATC CATGGTGT GATGTGAAGCCGTTTTT CTTATACAA 82 RIL182_RS16450 intergenic 3514839 3514966 + down AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTAC GGAAGAGCAGATGTCAGGCAAGTAAAAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTACTATTTTTCATTCGCACGGTACACAA AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTT 106 TTerm_0482 NZ_LR027880.1 3514904 3514920 17 3514929 3514945 17 8 94 0 29 55 44 56 43 0 3514924 AAAAACGGCTCCACATC GATGTGAAGCCGTTTTT True GCAAGACCA CTTATACAA True True + AAAAACGGCTCCACATC CATGGTGT GATGTGAAGCCGTTTTT CTTATACAA 82 RIL182_RS16455 intergenic 3514839 3514966 - down GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTT TTGTGTACCGTGCGAATGAAAAATAGTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTTTTACTTGCCTGACATCTGCTCTTCC AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTT 106 TTerm_0483 NZ_LR027880.1 3516177 3516190 14 3516197 3516210 14 6 100 0 28 50 50 50 50 0 3516193 AAAATGGGTGTGGC GCCACACCCATTTT True CGTAACCTA GATTTTTAA True True + AAAATGGGTGTGGC AAAACA GCCACACCCATTTT GATTTTTAA 88 RIL182_RS16460 intergenic 3516173 3516216 + down CCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTTGATTTT CAGTCAGTTAAGTAAACTTCCGTAACCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTTGATTTTTAAATTTTCCCGCTGTCTTTCAGCA CCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTT 37 TTerm_0484 NZ_LR027880.1 3516177 3516190 14 3516197 3516210 14 6 100 0 28 50 50 50 50 0 3516193 AAAATGGGTGTGGC GCCACACCCATTTT True CGTAACCTA GATTTTTAA True True + AAAATGGGTGTGGC AAAACA GCCACACCCATTTT GATTTTTAA 88 RIL182_RS16465 intergenic 3516173 3516216 - down AAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTTTAGG TGCTGAAAGACAGCGGGAAAATTTAAAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTTTAGGTTACGGAAGTTTACTTAACTGACTG CCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTT 37 TTerm_0485 NZ_LR027880.1 3522336 3522347 12 3522355 3522366 12 7 91 0 19 54 45 54 45 0 3522350 AAAAAGCAGAGC GCCCTGCTTTTT True TCCCACAAA CATTCCCGC True True + AAAAAGCAGAGC CACCCAT GCCCTGCTTTTT CATTCCCGC 78 RIL182_RS16495 intergenic 3522060 3522379 - down AGGTGCGGGAATGAAAAAGCAGGGCATGGGTGGCTCTGCTTTTTTTGTGGGAGTGGGGTGGCTGGGTTTGCCGGCTGGTGCGGTGTGCCGACCGCCTGCGTACCTGCATGAAAAAGAATACTATACAGCTTTCCTTTGGGTTGCTATAATAAAAAGAAAGGTTTGCCAACGCGAAACTCTCAAGAACGTAGCGTCGTTGTGCGGCGTGCCTTCGTTAAACAGGTGCCCGCCACACAACGACCACCACAACCTAAAAAAGAGTTTCGCCCTAGGCTCTATTACTTTATTATAACAACCCAAAAGAAAGGGGCACACACAA ACTTTATTGAGGTGTACCAGAGTTAAGGTGCGGGAATGAAAAAGCAGGGCATGGGTGGCTCTGCTTTTTTTGTGGGAGTGGGGTGGCTGGGTTTGCCGGCTGGTGCGGTGTGCCGACCGCCTGCGTACCTGCATGAAAAAGAATACTATACAGCTTTCCTTTGGGTTGCTATAATAAAAAGAAAGGTTTGCCAACGCGAAACTCTCAAGAACGTAGCGTCGTTGTGCGGCGTGCCTTCGTTAAACAGGTGCCCGCCACACAACGACCACCACAACCTAAAAAAGAGTTTCGCCCTAGGCTCTATTACTTTATTATAACAACCCAAAAGAAAGGGGCACACACAAATGAGCGAGTTAACCAAAGAAATGC TTGTGTGTGCCCCTTTCTTTTGGGTTGTTATAATAAAGTAATAGAGCCTAGGGCGAAACTCTTTTTTAGGTTGTGGTGGTCGTTGTGTGGCGGGCACCTGTTTAACGAAGGCACGCCGCACAACGACGCTACGTTCTTGAGAGTTTCGCGTTGGCAAACCTTTCTTTTTATTATAGCAACCCAAAGGAAAGCTGTATAGTATTCTTTTTCATGCAGGTACGCAGGCGGTCGGCACACCGCACCAGCCGGCAAACCCAGCCACCCCACTCCCACAAAAAAAGCAGAGCCACCCATGCCCTGCTTTTT 306 TTerm_0486 NZ_LR027880.1 3541728 3541738 11 3541743 3541753 11 4 90 0 17 77 22 80 20 0 3541740 ATGTATATGGA TCTATATACAT True CAAACATGA TTTTGAAAC False True + ATGTATATGGA TTTT TCTATATACAT TTTTGAAAC 42 RIL182_RS16575 intergenic 3541678 3542165 - down ATTGATTTAAAATAGCCGGAAAGTCGAGATTTTATTGTAAAATCAAGGTTTTCCGGCTATTGTTTTAATCTAAAATACTCGAATATGTATGATTATGAGTTGCATGGATTGGTGATCTGTATAGTAATACACAGCAGAATTATACGGGATATGAACACAGTAAAAAGTGAAACAGATTTTATATGAAAAAGGCGGATAGAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGGAATTTTGTGCGTATTGACCAGAAATGAAGGGTAACCTCAGATGGAATGCTGATAACTGGATTGTTTATAAAAATGCATAGATAAAAAAGTTAAAGCGAAATCCCTGTAATAAAAGTAAAATAATTGAGGAAATTTGTATAATATGGTAAAATAATGGCAAGGAAGTTTCAAAAATGTATATAGAAAAATCCATATACATCATGTTTGTAAACTCCGGAATGAAAGTATGGAAGCGGGAGGAACAATTT TGCAGGTTCAAGTCCTGTCACCCGCATTGATTTAAAATAGCCGGAAAGTCGAGATTTTATTGTAAAATCAAGGTTTTCCGGCTATTGTTTTAATCTAAAATACTCGAATATGTATGATTATGAGTTGCATGGATTGGTGATCTGTATAGTAATACACAGCAGAATTATACGGGATATGAACACAGTAAAAAGTGAAACAGATTTTATATGAAAAAGGCGGATAGAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGGAATTTTGTGCGTATTGACCAGAAATGAAGGGTAACCTCAGATGGAATGCTGATAACTGGATTGTTTATAAAAATGCATAGATAAAAAAGTTAAAGCGAAATCCCTGTAATAAAAGTAAAATAATTGAGGAAATTTGTATAATATGGTAAAATAATGGCAAGGAAGTTTCAAAAATGTATATAGAAAAATCCATATACATCATGTTTGTAAACTCCGGAATGAAAGTATGGAAGCGGGAGGAACAATTTATGAACAATGTGAAAGTACAGACGA AAATTGTTCCTCCCGCTTCCATACTTTCATTCCGGAGTTTACAAACATGATGTATATGGATTTTTCTATATACAT 75 TTerm_0487 NZ_LR027880.1 3544972 3544982 11 3544989 3544999 11 6 81 0 12 72 27 77 22 0 3544985 AAAAATCTGGT ACAAGCTTTTT True ATATTAGCA ATCACAGAT True True + AAAAATCTGGT CATACC ACAAGCTTTTT ATCACAGAT 48 RIL182_RS16595 intergenic 3544931 3545395 - down AGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGT TGGGAGAGCTGCTTTTAGACAGATAAGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGTATGCATATGGCAGATGCGTTGGTTG ACCAAAATACCACCTTTCATTTATCTTTGACCATATTAGCAAAAATCTGGTCATACCACAAGCTTTTT 68 TTerm_0488 NZ_LR027880.1 3546064 3546075 12 3546080 3546091 12 4 91 0 19 45 54 45 54 0 3546077 CGGAAGTGCTGA TCAACACTTCCG True AAAAAGAAC CATTTTCAA True True + CGGAAGTGCTGA AAAA TCAACACTTCCG CATTTTCAA 54 RIL182_RS16600 intergenic 3545922 3546105 - down ACGATTTGAAAATGCGGAAGTGTTGATTTTTCAGCACTTCCGTTCTTTTTTATGCTTTTTCGATTGGGTTGGGTGTGGGTTGGAGAGTATCTGTTTTTTTCATGTCCACATTGTGTCCGCAGGATCATGTATCTTATGGATGGCAAGTTAGTGTAATGATAATGTATGCCAAGGGAGGCAAAA CCGGGGTTCGAATCCCCGATGTCTCACGATTTGAAAATGCGGAAGTGTTGATTTTTCAGCACTTCCGTTCTTTTTTATGCTTTTTCGATTGGGTTGGGTGTGGGTTGGAGAGTATCTGTTTTTTTCATGTCCACATTGTGTCCGCAGGATCATGTATCTTATGGATGGCAAGTTAGTGTAATGATAATGTATGCCAAGGGAGGCAAAAATGAACCAGTTTTCATCAGATAAAC TTTTGCCTCCCTTGGCATACATTATCATTACACTAACTTGCCATCCATAAGATACATGATCCTGCGGACACAATGTGGACATGAAAAAAACAGATACTCTCCAACCCACACCCAACCCAATCGAAAAAGCATAAAAAAGAACGGAAGTGCTGAAAAATCAACACTTCCG 169 TTerm_0489 NZ_LR027880.1 3562343 3562348 6 3562353 3562358 6 4 100 0 12 66 33 66 33 0 3562350 GGTAAA TTTACC True ACGCGTTTG GTTTTGTTA False True + GGTAAA TTTC TTTACC GTTTTGTTA 40 RIL182_RS16725 intergenic 3562281 3562576 - down ATTCACTGGAAAATCCAGTGTGAGTCATGAAACATTTTTGGAAAGTGCAGAATGGTAAAAGCCATAAATCGCTTTTTAAAATGTAAATTGACGCAGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGA CAAGAGTTCGAATCTCTCCATCTCCATTCACTGGAAAATCCAGTGTGAGTCATGAAACATTTTTGGAAAGTGCAGAATGGTAAAAGCCATAAATCGCTTTTTAAAATGTAAATTGACGCAGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGT TCTTAACCAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTTAAAAACGCGTTTGGTAAATTTCTTTACC 77 TTerm_0490 NZ_LR027880.1 3562759 3562765 7 3562770 3562776 7 4 100 0 14 85 14 85 14 0 3562767 AATCAAA TTTGATT True ATAAGCCCA TTTAAATCT False True + AATCAAA ATAA TTTGATT TTTAAATCT 36 RIL182_RS16735 intergenic 3562758 3562782 - down TTTAAAAATCAAATTATTTTGATT TATGGGAAAGCAGGTGGCTGCCAGATTTAAAAATCAAATTATTTTGATTGGGCTTATAGCTCAGCCGGTTAGAG AATCAAAATAATTTGATT 18 TTerm_0491 NZ_LR027880.1 3568485 3568492 8 3568502 3568509 8 9 87 0 11 43 56 42 57 0 3568496 ACGAGGAG CTCCTTGT True GTCCACTGA TTTGCGAAG False True + ACGAGGAG AGGATTTTA CTCCTTGT TTTGCGAAG 46 RIL182_RS21385 intergenic 3568443 3568499 - down AAATCCTCTCCTCGTCAGTGGACTCGGATTTTGCTCCGCAAAACAAGGAGGATTAT ATTTTGCTTCGCAAAACAAGGAGTAAAATCCTCTCCTCGTCAGTGGACTCGGATTTTGCTCCGCAAAACAAGGAGGATTATATGTTAGACGTATGTCTTTTGGGAA ATAATCCTCCTTGTTTTGCGGAGCAAAATCCGAGTCCACTGACGAGGAGAGGATTTTACTCCTTGT 66 TTerm_0492 NZ_LR027880.1 3571215 3571226 12 3571236 3571247 12 9 100 0 24 58 41 58 41 0 3571230 AGAAAAGACGCA TGCGTCTTTTCT True GAAAAAAAA CTCTGAAAA True True + AGAAAAGACGCA TTCTTTTTC TGCGTCTTTTCT CTCTGAAAA 80 RIL182_RS16800 intergenic 3571160 3571415 - down AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACG CGATCTTAAAGGGAAGACAGTCATAAGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACGATGAGATTGGAATTTGATATAACAT CGTCAATCCCCCACCATTTTAGAATCAGCTTAGTATAACATTTTTTGAAAAAAAAGAAAAGACGCATTCTTTTTCTGCGTCTTTTCT 87 TTerm_0493 NZ_LR027880.1 3579437 3579458 22 3579463 3579484 22 4 90 0 34 59 40 60 40 0 3579460 AAAACGAACCACCCGGTGTAAA TTTACACCAAGTGGTTCGTTTT True CATTATAAA CCTATGGTA True True + AAAACGAACCACCCGGTGTAAA TGCT TTTACACCAAGTGGTTCGTTTT CCTATGGTA 76 RIL182_RS16840 intergenic 3579398 3579507 - down AAAAATTTACCACTTACCATAGGAAAACGAACCACTTGGTGTAAAAGCATTTACACCGGGTGGTTCGTTTTTTATAATGTACCTGTCAGTACAGAAAAGGAGACAGGTT TTTCCGCAATGAGCCGCATTATGTAAAAAATTTACCACTTACCATAGGAAAACGAACCACTTGGTGTAAAAGCATTTACACCGGGTGGTTCGTTTTTTATAATGTACCTGTCAGTACAGAAAAGGAGACAGGTTATGAAAATTAAAATCGAAATGGATG AACCTGTCTCCTTTTCTGTACTGACAGGTACATTATAAAAAACGAACCACCCGGTGTAAATGCTTTTACACCAAGTGGTTCGTTTT 86 TTerm_0494 NZ_LR027880.1 3585464 3585478 15 3585487 3585501 15 8 93 0 25 50 50 50 50 0 3585482 AAAAGGCGGTCACAG CTGTGACCACCTTTT True TCGTGGACA TCTATTTAC True True + AAAAGGCGGTCACAG CCGTTAGT CTGTGACCACCTTTT TCTATTTAC 74 RIL182_RS22355 intergenic 3585437 3585520 + down TTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTTTCTATTTACTGCAGATGTC TCAATATAAGCTGATTACGATTTAGTTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTTTCTATTTACTGCAGATGTCTATGCTTCTGCTTCTTTCGCATTAT TTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTT 64 TTerm_0495 NZ_LR027880.1 3585464 3585478 15 3585487 3585501 15 8 93 0 25 50 50 50 50 0 3585482 AAAAGGCGGTCACAG CTGTGACCACCTTTT True TCGTGGACA TCTATTTAC True True + AAAAGGCGGTCACAG CCGTTAGT CTGTGACCACCTTTT TCTATTTAC 74 RIL182_RS16870 intergenic 3585437 3585520 - down GACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTTTGTCCACGAATCTACAAAAATTCCTAA ATAATGCGAAAGAAGCAGAAGCATAGACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTTTGTCCACGAATCTACAAAAATTCCTAACTAAATCGTAATCAGCTTATATTGA TTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTT 64 TTerm_0496 NZ_LR027880.1 3586446 3586455 10 3586462 3586471 10 6 90 0 15 95 5 100 0 0 3586458 AAATATTTTA TAAAGTATTT True CGCAAGCAA ATGTTTTAA True True + AAATATTTTA GTACTT TAAAGTATTT ATGTTTTAA 38 RIL182_RS16875 intergenic 3586320 3586510 - down GAAAACATGTCGGAAATGATATTATACACTTTAAAACATAAATACTTTAAAGTACTAAAATATTTTGCTTGCGGAATGTGTCACATCTTGTTATAATGCTTTTTATAAAACAGGGAGGAAAACCAGGAGGAAAATCCTCTGCTCCTGCAGTGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTATA GCGATATGAAAGGTGTGATCGAGTAGAAAACATGTCGGAAATGATATTATACACTTTAAAACATAAATACTTTAAAGTACTAAAATATTTTGCTTGCGGAATGTGTCACATCTTGTTATAATGCTTTTTATAAAACAGGGAGGAAAACCAGGAGGAAAATCCTCTGCTCCTGCAGTGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTATAATGGATAAGATAGAAGCGATCCGTG TATAATCCTCCTTGTTTTGCGGAGCAAAATGCGACTGCCACTGCAGGAGCAGAGGATTTTCCTCCTGGTTTTCCTCCCTGTTTTATAAAAAGCATTATAACAAGATGTGACACATTCCGCAAGCAAAATATTTTAGTACTTTAAAGTATTT 151 TTerm_0497 NZ_LR027880.1 3589567 3589586 20 3589591 3589610 20 4 90 0 30 62 37 61 38 0 3589588 AAAAACCGGGTGTCAAAAGA TCATTTGACATCCGGTTTTT True GTGAATTAA GTTACTTAT True True + AAAAACCGGGTGTCAAAAGA CACT TCATTTGACATCCGGTTTTT GTTACTTAT 68 RIL182_RS16895 intergenic 3589453 3589664 - down ATAAGCGTATTTTTGAAAAGGATGTCCCGTATCGAGACAATTCTCATAAGTAACAAAAACCGGATGTCAAATGAAGTGTCTTTTGACACCCGGTTTTTTAATTCACAGGAAATCAAATTTGAAAAAAACCAGAGAAATCTGATAGGATATAATAATAAATGAGCGAATCTGTATGTCAAAAAAGTTATACGAGGGAAGGAGAAAAGGCTGC TAAATCTGATCCATGAGAGTATGTAATAAGCGTATTTTTGAAAAGGATGTCCCGTATCGAGACAATTCTCATAAGTAACAAAAACCGGATGTCAAATGAAGTGTCTTTTGACACCCGGTTTTTTAATTCACAGGAAATCAAATTTGAAAAAAACCAGAGAAATCTGATAGGATATAATAATAAATGAGCGAATCTGTATGTCAAAAAAGTTATACGAGGGAAGGAGAAAAGGCTGCATGAAAAAGTTTATTCATGTCATAG GCAGCCTTTTCTCCTTCCCTCGTATAACTTTTTTGACATACAGATTCGCTCATTTATTATTATATCCTATCAGATTTCTCTGGTTTTTTTCAAATTTGATTTCCTGTGAATTAAAAAACCGGGTGTCAAAAGACACTTCATTTGACATCCGGTTTTT 157 TTerm_0498 NZ_LR027880.1 3602197 3602216 20 3602222 3602241 20 5 95 0 35 57 42 57 42 0 3602218 CAAAACAGGCGGAATGACAA TTATCATTCCGCCTGTTTTG True CCAATATAC ATAAATAAT True True + CAAAACAGGCGGAATGACAA TATTT TTATCATTCCGCCTGTTTTG ATAAATAAT 78 RIL182_RS16940 intergenic 3602115 3602329 - down ATTTATGTTTCGGATGACAGTCAGCAACGTCGTCCGGTTAATTTAGGTACGCTGTACCGGATTTGTAAATGCAGAGCCGATTATTTATCAAAACAGGCGGAATGATAAAAATATTGTCATTCCGCCTGTTTTGTATATTGGATTTTTATCCGGGAAGTAATAAGATGACCACAGAACGAAGATAATAAAAGCAGTTAGAAAGGAGATTCTTATT TTGGAAATTTTTTAGATGAAGGGTGATTTATGTTTCGGATGACAGTCAGCAACGTCGTCCGGTTAATTTAGGTACGCTGTACCGGATTTGTAAATGCAGAGCCGATTATTTATCAAAACAGGCGGAATGATAAAAATATTGTCATTCCGCCTGTTTTGTATATTGGATTTTTATCCGGGAAGTAATAAGATGACCACAGAACGAAGATAATAAAAGCAGTTAGAAAGGAGATTCTTATTATGTCAAATAAAAATAAAACCATCG AATAAGAATCTCCTTTCTAACTGCTTTTATTATCTTCGTTCTGTGGTCATCTTATTACTTCCCGGATAAAAATCCAATATACAAAACAGGCGGAATGACAATATTTTTATCATTCCGCCTGTTTTG 126 TTerm_0499 NZ_LR027880.1 3608012 3608017 6 3608025 3608030 6 7 100 0 12 83 16 83 16 0 3608020 ACATTT AAATGT True TTCTTCATA TTTTCTTTA False True + ACATTT ACCTCCC AAATGT TTTTCTTTA 32 RIL182_RS16965 intergenic 3608011 3608098 - down ACAGAAAAACATGTATCACACGGAAGATCATCTGAAAACAGGAGATACTTTCGATCTGATAAAGAAAAACATTTGGGAGGTAAATGT CAGTCTGGATCAGACAGCTGATCTGACAGAAAAACATGTATCACACGGAAGATCATCTGAAAACAGGAGATACTTTCGATCTGATAAAGAAAAACATTTGGGAGGTAAATGTATGAAGAAGAAGGTTTTAGCAGCAT ACATTTACCTCCCAAATGT 19 TTerm_0500 NZ_LR027880.1 3619820 3619838 19 3619846 3619864 19 7 94 0 33 55 44 55 44 0 3619841 AAAAAAATCCCCGGATCAC GTGATCCGGGGATTTTCTT True ATGAATTTA TTTTATTCA True True + AAAAAAATCCCCGGATCAC CAATTCC GTGATCCGGGGATTTTCTT TTTTATTCA 90 RIL182_RS17015 intergenic 3619686 3619914 + down GATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTTTTTTATTCATTTATAAGCTGTCATAGCTTCGTATTTTCACTACATTTTCT CGAGAAAAATAATCCGCAGATTTAAGATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTTTTTTATTCATTTATAAGCTGTCATAGCTTCGTATTTTCACTACATTTTCTTACTTTGTAAGCTGTCCTACGACCT GATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTT 178 TTerm_0501 NZ_LR027880.1 3619820 3619838 19 3619846 3619864 19 7 94 0 33 55 44 55 44 0 3619841 AAAAAAATCCCCGGATCAC GTGATCCGGGGATTTTCTT True ATGAATTTA TTTTATTCA True True + AAAAAAATCCCCGGATCAC CAATTCC GTGATCCGGGGATTTTCTT TTTTATTCA 90 RIL182_RS17025 intergenic 3619686 3619914 - down AGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTTTAAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACGCTTTGTTCCAGATC AGGTCGTAGGACAGCTTACAAAGTAAGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTTTAAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACGCTTTGTTCCAGATCTTAAATCTGCGGATTATTTTTCTCG GATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTT 178 TTerm_0502 NZ_LR027880.1 3625073 3625079 7 3625088 3625094 7 8 100 0 14 100 0 100 0 0 3625083 AATATAT ATATATT True TTCAATACA TTTCAGAAT False True + AATATAT CATTTTTT ATATATT TTTCAGAAT 28 RIL182_RS17050 intergenic 3624990 3625206 - down ATGGCGAGTCATTATGACATTGCATCCCTTGTTAAATGTGTAATATTGATCGTGCCAGCGAATGATGCACATTTTTACAAGAATATTACAGGAAAATATAAATATTCTGAAAAATATATAAAAAATGATATATTGTATTGAAATATTTGTGGAAAGTGCTATAATAAAACCATGATATAAATCTGTATCAAATAAACGGCAAAGGGGTTGGACATC AGATGATAAGGGATGCAATGTCATAATGGCGAGTCATTATGACATTGCATCCCTTGTTAAATGTGTAATATTGATCGTGCCAGCGAATGATGCACATTTTTACAAGAATATTACAGGAAAATATAAATATTCTGAAAAATATATAAAAAATGATATATTGTATTGAAATATTTGTGGAAAGTGCTATAATAAAACCATGATATAAATCTGTATCAAATAAACGGCAAAGGGGTTGGACATCATGAGAATCAAGATTACAGGAAGAA GATGTCCAACCCCTTTGCCGTTTATTTGATACAGATTTATATCATGGTTTTATTATAGCACTTTCCACAAATATTTCAATACAATATATCATTTTTTATATATT 104 TTerm_0503 NZ_LR027880.1 3625087 3625094 8 3625101 3625108 8 6 87 0 11 100 0 100 0 0 3625097 TATATATT AATATTTA True TCATTTTTT TATTTTCCT False True + TATATATT TTTCAG AATATTTA TATTTTCCT 22 RIL182_RS17050 intergenic 3624990 3625206 - down ATGGCGAGTCATTATGACATTGCATCCCTTGTTAAATGTGTAATATTGATCGTGCCAGCGAATGATGCACATTTTTACAAGAATATTACAGGAAAATATAAATATTCTGAAAAATATATAAAAAATGATATATTGTATTGAAATATTTGTGGAAAGTGCTATAATAAAACCATGATATAAATCTGTATCAAATAAACGGCAAAGGGGTTGGACATC AGATGATAAGGGATGCAATGTCATAATGGCGAGTCATTATGACATTGCATCCCTTGTTAAATGTGTAATATTGATCGTGCCAGCGAATGATGCACATTTTTACAAGAATATTACAGGAAAATATAAATATTCTGAAAAATATATAAAAAATGATATATTGTATTGAAATATTTGTGGAAAGTGCTATAATAAAACCATGATATAAATCTGTATCAAATAAACGGCAAAGGGGTTGGACATCATGAGAATCAAGATTACAGGAAGAA GATGTCCAACCCCTTTGCCGTTTATTTGATACAGATTTATATCATGGTTTTATTATAGCACTTTCCACAAATATTTCAATACAATATATCATTTTTTATATATTTTTCAGAATATTTA 118 TTerm_0504 NZ_LR027880.1 3628526 3628532 7 3628539 3628545 7 6 100 0 14 85 14 85 14 0 3628535 TATAACA TGTTATA True GTCAGTCAT ATTTTTGAT False True + TATAACA ATTAGA TGTTATA ATTTTTGAT 36 RIL182_RS17060 intergenic 3628200 3628592 - down AGCTTTTTTTTGGTACATTTTACCTATTGAAAAAATGAATCAAAAATTATAACATCTAATTGTTATATGACTGACGGAAAAAGTGGAAGAACCACATGAAGTATAACGTTTACAATGCCGACCGTCTGGGCGAGATAACCCGGACTGTCGGTTTCTTTTATTCTTAAAGATATTCTTCTTACAGGAATCCTTTTGTATGAAAAAAAGAACAGTTCCGGAAACGAAGCGGATATTGACAAGCAGTGATGGAACATGATATATTCACAGCGTTAGAACTAGCTAACAAAAGTTAGAAATAACTACCAATATTTTCCAGCAATACAAAAATATTGGGGGATCAGATCCGTTTTATACAGGTAAACCATAGTTTTCAGCAAACAGGAGGAAAAATA GCATAGCAATTTACACAATGATATAAGCTTTTTTTTGGTACATTTTACCTATTGAAAAAATGAATCAAAAATTATAACATCTAATTGTTATATGACTGACGGAAAAAGTGGAAGAACCACATGAAGTATAACGTTTACAATGCCGACCGTCTGGGCGAGATAACCCGGACTGTCGGTTTCTTTTATTCTTAAAGATATTCTTCTTACAGGAATCCTTTTGTATGAAAAAAAGAACAGTTCCGGAAACGAAGCGGATATTGACAAGCAGTGATGGAACATGATATATTCACAGCGTTAGAACTAGCTAACAAAAGTTAGAAATAACTACCAATATTTTCCAGCAATACAAAAATATTGGGGGATCAGATCCGTTTTATACAGGTAAACCATAGTTTTCAGCAAACAGGAGGAAAAATAATGCAAAACGAATGGAGAGATTTTA TATTTTTCCTCCTGTTTGCTGAAAACTATGGTTTACCTGTATAAAACGGATCTGATCCCCCAATATTTTTGTATTGCTGGAAAATATTGGTAGTTATTTCTAACTTTTGTTAGCTAGTTCTAACGCTGTGAATATATCATGTTCCATCACTGCTTGTCAATATCCGCTTCGTTTCCGGAACTGTTCTTTTTTTCATACAAAAGGATTCCTGTAAGAAGAATATCTTTAAGAATAAAAGAAACCGACAGTCCGGGTTATCTCGCCCAGACGGTCGGCATTGTAAACGTTATACTTCATGTGGTTCTTCCACTTTTTCCGTCAGTCATATAACAATTAGATGTTATA 345 TTerm_0505 NZ_LR027880.1 3631145 3631162 18 3631171 3631188 18 8 94 0 31 75 25 76 23 0 3631166 ATAAAAAATGGTAACAGT ACTGTCACCATTTTTTAT True TTACCGCAA ATGGGCATT True True + ATAAAAAATGGTAACAGT CCGTCTGA ACTGTCACCATTTTTTAT ATGGGCATT 86 RIL182_RS17070 intergenic 3631134 3631175 + down TATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGT CGCCCCGGTGGAGGAAATGAAGTAATATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGTCACCATTTTTTATATGGGCATTTTG TATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGTCACCATTTTTTAT 54 TTerm_0506 NZ_LR027880.1 3631145 3631162 18 3631171 3631188 18 8 94 0 31 75 25 76 23 0 3631166 ATAAAAAATGGTAACAGT ACTGTCACCATTTTTTAT True TTACCGCAA ATGGGCATT True True + ATAAAAAATGGTAACAGT CCGTCTGA ACTGTCACCATTTTTTAT ATGGGCATT 86 RIL182_RS17075 intergenic 3631134 3631175 - down ACAGTTCAGACGGACTGTTACCATTTTTTATTGCGGTAATA CAAAATGCCCATATAAAAAATGGTGACAGTTCAGACGGACTGTTACCATTTTTTATTGCGGTAATATTACTTCATTTCCTCCACCGGGGCG TATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGTCACCATTTTTTAT 54 TTerm_0507 NZ_LR027880.1 3634064 3634075 12 3634080 3634091 12 4 83 0 14 87 12 90 10 0 3634077 GTATAGATTATT AATATTATATAC True TTTGTTTTG TTTTCTAAA False True + GTATAGATTATT CTAA AATATTATATAC TTTTCTAAA 28 RIL182_RS17090 intergenic 3633991 3634176 - down GTGAGAAATAAAAAATGGCGGAGGCAGAGTGCTTCCGCTGTTTTTTTGCCTGGTGATGTAGTCTGCGTTTTTTGATTTTAGAAAAGTATATAATATTTTAGAATAATCTATACAAAACAAAAAATAAGGAGTATACTGTCATAAGAAAGAAACAGTGCGAATGTCATCAGAGGGGAGGATACTGC AATACTTTGAAAAACAGAAATATTAGTGAGAAATAAAAAATGGCGGAGGCAGAGTGCTTCCGCTGTTTTTTTGCCTGGTGATGTAGTCTGCGTTTTTTGATTTTAGAAAAGTATATAATATTTTAGAATAATCTATACAAAACAAAAAATAAGGAGTATACTGTCATAAGAAAGAAACAGTGCGAATGTCATCAGAGGGGAGGATACTGCATGTCAGATGAAAAATCTTTAAAGT GCAGTATCCTCCCCTCTGATGACATTCGCACTGTTTCTTTCTTATGACAGTATACTCCTTATTTTTTGTTTTGTATAGATTATTCTAAAATATTATATAC 100 TTerm_0508 NZ_LR027880.1 3637264 3637274 11 3637282 3637292 11 7 81 0 12 86 13 88 11 0 3637277 AATAGCAAAAT ATTTTACAATT True AACTCTACA ATTTATTTT False True + AATAGCAAAAT CATTTTT ATTTTACAATT ATTTATTTT 24 RIL182_RS17100 intergenic 3637227 3637327 - down AAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGT GCGAGCAGGAATGGGAACAAAAATAAAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGTATGAGAAAACAAAGCAAAATCATTT ACGGCTCCTCCATTTCTGTATGATATCTAACTCTACAATAGCAAAATCATTTTTATTTTACAATT 65 TTerm_0509 NZ_LR027880.1 3637296 3637302 7 3637311 3637317 7 8 100 0 14 100 0 100 0 0 3637306 TATTTTA TAAAATA True CAATTATTT TTTTACTTT False True + TATTTTA CTTTTTTA TAAAATA TTTTACTTT 28 RIL182_RS17100 intergenic 3637227 3637327 - down AAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGT GCGAGCAGGAATGGGAACAAAAATAAAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGTATGAGAAAACAAAGCAAAATCATTT ACGGCTCCTCCATTTCTGTATGATATCTAACTCTACAATAGCAAAATCATTTTTATTTTACAATTATTTATTTTACTTTTTTATAAAATA 90 TTerm_0510 NZ_LR027880.1 3637310 3637315 6 3637325 3637330 6 9 100 0 12 100 0 100 0 0 3637319 ATAAAA TTTTAT True ACTTTTTTA TTTTGTTCC False True + ATAAAA TATTTTACT TTTTAT TTTTGTTCC 24 RIL182_RS17100 intergenic 3637227 3637327 - down AAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGT GCGAGCAGGAATGGGAACAAAAATAAAAAGTAAAATATTTTATAAAAAAGTAAAATAAATAATTGTAAAATAAAAATGATTTTGCTATTGTAGAGTTAGATATCATACAGAAATGGAGGAGCCGTATGAGAAAACAAAGCAAAATCATTT ACGGCTCCTCCATTTCTGTATGATATCTAACTCTACAATAGCAAAATCATTTTTATTTTACAATTATTTATTTTACTTTTTTATAAAATATTTTACTTTTTAT 103 TTerm_0511 NZ_LR027880.1 3650375 3650388 14 3650393 3650406 14 4 85 0 18 50 50 50 50 0 3650390 GTTACTGTTCACAC GTGTGACCCGTAAC True GCATTTTTG TTATTTTTA False True + GTTACTGTTCACAC ACAA GTGTGACCCGTAAC TTATTTTTA 60 RIL182_RS17135 intergenic 3650350 3650455 - down GATCAGACAGAAAATAACAGTGGGAGGCTGAAAAGTCAGGTAAAAATAAGTTACGGGTCACACTTGTGTGTGAACAGTAACAAAAATGCAAGGATCAGGAATAGA AGGATCTGGAGTCTTATGCAGAATAGATCAGACAGAAAATAACAGTGGGAGGCTGAAAAGTCAGGTAAAAATAAGTTACGGGTCACACTTGTGTGTGAACAGTAACAAAAATGCAAGGATCAGGAATAGAATGAATATTGCATATTGTGAAGATG TCTATTCCTGATCCTTGCATTTTTGTTACTGTTCACACACAAGTGTGACCCGTAAC 56 TTerm_0512 NZ_LR027880.1 3669308 3669317 10 3669322 3669331 10 4 90 0 15 35 65 33 66 0 3669319 AGGCTGTCTC GAGGCAGCCT True ATAGTTATA CTTTTTGTT False True + AGGCTGTCTC TTAC GAGGCAGCCT CTTTTTGTT 62 RIL182_RS17240 intergenic 3669279 3669353 - down ATTTATTATAAGAAACAAAAAGAGGCTGCCTCGTAAGAGACAGCCTATAACTATAAACAGGAATGGAGTTTGCG GAGATAACGGTGGAAATGGTCAGTAATTTATTATAAGAAACAAAAAGAGGCTGCCTCGTAAGAGACAGCCTATAACTATAAACAGGAATGGAGTTTGCGATGAAGATTGGAAAAGTACCGGAGA CGCAAACTCCATTCCTGTTTATAGTTATAGGCTGTCTCTTACGAGGCAGCCT 52 TTerm_0513 NZ_LR027880.1 3674481 3674506 26 3674515 3674540 26 8 80 0 27 51 48 52 47 0 3674510 AAAAAAATCCGGTTCCCCGCTGCCAG CTGACAGTGTGAAACCGGATTTTCTT True CAACGTACA TTCTTCATA True True + AAAAAAATCCGGTTCCCCGCTGCCAG ATTTTTAC CTGACAGTGTGAAACCGGATTTTCTT TTCTTCATA 78 RIL182_RS17260 intergenic 3674422 3674620 - down GATAACAGATTGTACGCTTTTGTGCAATTTGACAGACCTAAAATTGAAAACCACCTTTTGACACACGAATCTATGAAGAAAAGAAAATCCGGTTTCACACTGTCAGGTAAAAATCTGGCAGCGGGGAACCGGATTTTTTTGTACGTTGCAACAAGGTTTTTTCTTCGCTATAATGAAAAAAATGGAGGCAAAAAACAG TTATCGTAAGACATATTTTGCGGTAGATAACAGATTGTACGCTTTTGTGCAATTTGACAGACCTAAAATTGAAAACCACCTTTTGACACACGAATCTATGAAGAAAAGAAAATCCGGTTTCACACTGTCAGGTAAAAATCTGGCAGCGGGGAACCGGATTTTTTTGTACGTTGCAACAAGGTTTTTTCTTCGCTATAATGAAAAAAATGGAGGCAAAAAACAGATGAAGATTTTACTTACGGCGATCA CTGTTTTTTGCCTCCATTTTTTTCATTATAGCGAAGAAAAAACCTTGTTGCAACGTACAAAAAAATCCGGTTCCCCGCTGCCAGATTTTTACCTGACAGTGTGAAACCGGATTTTCTT 118 TTerm_0514 NZ_LR027880.1 3683908 3683928 21 3683936 3683956 21 7 100 0 42 66 33 66 33 0 3683931 AAAAAGTGTCCCTGAAAATCT AGATTTTCAGGGACACTTTTT True ACGAACCAA ATATCTGTT True True + AAAAAGTGTCCCTGAAAATCT TTTATCC AGATTTTCAGGGACACTTTTT ATATCTGTT 92 RIL182_RS17290 intergenic 3683853 3683989 + down CGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTTATATCTGTTTCTCTTTCTTTCCGCTTAATCACT CAATGAAGGTAAAATTACAGTATAGCGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTTATATCTGTTTCTCTTTCTTTCCGCTTAATCACTTAATCGATTTCTTTATAATCTACGT CGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTT 103 TTerm_0515 NZ_LR027880.1 3683908 3683928 21 3683936 3683956 21 7 100 0 42 66 33 66 33 0 3683931 AAAAAGTGTCCCTGAAAATCT AGATTTTCAGGGACACTTTTT True ACGAACCAA ATATCTGTT True True + AAAAAGTGTCCCTGAAAATCT TTTATCC AGATTTTCAGGGACACTTTTT ATATCTGTT 92 RIL182_RS17295 intergenic 3683853 3683989 - down AGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTTTTGGTTCGTGATAATAGAATATTTGAGCAAGCTGCATCTGATTGCCCAGACTGCG ACGTAGATTATAAAGAAATCGATTAAGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTTTTGGTTCGTGATAATAGAATATTTGAGCAAGCTGCATCTGATTGCCCAGACTGCGCTATACTGTAATTTTACCTTCATTG CGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTT 103 TTerm_0516 NZ_LR027880.1 3695744 3695756 13 3695762 3695774 13 5 100 0 26 76 23 76 23 0 3695758 AAAAAGATAGCTA TAGCTATCTTTTT True TTTCAGAAA AGGAGAAGG True True + AAAAAGATAGCTA TCGGC TAGCTATCTTTTT AGGAGAAGG 68 RIL182_RS17335 intergenic 3695707 3695978 + down CCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTTAGGAGAAGGTATTTTTACTATGGGGTATAGCAAAAAATATATATAATGTATTGGGGGGTTTTTACAGTAATTATAATAGCATGAGCGGCAGGATAAGTGTGCACAAATTTGAAGTTTTTTTACCGCCCAAACTATACAAAATAAACAGTACCTTAGTACCGGTTTAAAAACTGGTACTAAAATTATGCACAAACGATTGCGCAT CACTTTTGCGAACAAACAAAAATAACCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTTAGGAGAAGGTATTTTTACTATGGGGTATAGCAAAAAATATATATAATGTATTGGGGGGTTTTTACAGTAATTATAATAGCATGAGCGGCAGGATAAGTGTGCACAAATTTGAAGTTTTTTTACCGCCCAAACTATACAAAATAAACAGTACCTTAGTACCGGTTTAAAAACTGGTACTAAAATTATGCACAAACGATTGCGCATCAGATTTCCCAATAGTTTTCATGGA CCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTT 67 TTerm_0517 NZ_LR027880.1 3695744 3695756 13 3695762 3695774 13 5 100 0 26 76 23 76 23 0 3695758 AAAAAGATAGCTA TAGCTATCTTTTT True TTTCAGAAA AGGAGAAGG True True + AAAAAGATAGCTA TCGGC TAGCTATCTTTTT AGGAGAAGG 68 RIL182_RS17340 intergenic 3695707 3695978 - down ATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTTTTTCTGAAAAAATAACCATGCGGTTAAAATCGCATGG TCCATGAAAACTATTGGGAAATCTGATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTTTTTCTGAAAAAATAACCATGCGGTTAAAATCGCATGGTTATTTTTGTTTGTTCGCAAAAGTG CCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTT 67 TTerm_0518 NZ_LR027880.1 3705025 3705038 14 3705043 3705056 14 4 92 0 23 67 32 69 30 0 3705040 AAAAATGAAACCTG CAGGTTCCATTTTT True ATGACAAAA AGGAGAAGG True True + AAAAATGAAACCTG GGGT CAGGTTCCATTTTT AGGAGAAGG 70 RIL182_RS17380 intergenic 3704776 3705249 - down ATTGTGCATATTTTTCTGTTCTCACAAAAATATGATACCAAGGTACTGTACAATATGCATAAAAACAATGATGAAAAATTGTGAACTTTGTGCACACTTATTTGCGGGGGCATGCTATTATAATAACCGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAATGGAACCTGACCCCAGGTTTCATTTTTTTTGTCATTTTTTAATCTGTAATCAGAGCACATCTTTTGAAATACACAACCCCATAAATAATTGAAAAAATTTTCCAATTATATCTTGACACATCAGCGAACTAAAGTTATAATCCTAGTAATCTTATAGGAAATATATGAAAAAGAAAAAATAAAGGAACAGATGATAAGATATTAAGACAGTTTTACAGGACAGCAGACACAGATTTTACCTGTGCGTGACGCAGGTTTTACGGAGTGGAGGGACA AGTTTGAGGCGTTATTTGATAAGTAATTGTGCATATTTTTCTGTTCTCACAAAAATATGATACCAAGGTACTGTACAATATGCATAAAAACAATGATGAAAAATTGTGAACTTTGTGCACACTTATTTGCGGGGGCATGCTATTATAATAACCGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAATGGAACCTGACCCCAGGTTTCATTTTTTTTGTCATTTTTTAATCTGTAATCAGAGCACATCTTTTGAAATACACAACCCCATAAATAATTGAAAAAATTTTCCAATTATATCTTGACACATCAGCGAACTAAAGTTATAATCCTAGTAATCTTATAGGAAATATATGAAAAAGAAAAAATAAAGGAACAGATGATAAGATATTAAGACAGTTTTACAGGACAGCAGACACAGATTTTACCTGTGCGTGACGCAGGTTTTACGGAGTGGAGGGACAATGAGAAAGAGGATGGCAGCAATCC TGTCCCTCCACTCCGTAAAACCTGCGTCACGCACAGGTAAAATCTGTGTCTGCTGTCCTGTAAAACTGTCTTAATATCTTATCATCTGTTCCTTTATTTTTTCTTTTTCATATATTTCCTATAAGATTACTAGGATTATAACTTTAGTTCGCTGATGTGTCAAGATATAATTGGAAAATTTTTTCAATTATTTATGGGGTTGTGTATTTCAAAAGATGTGCTCTGATTACAGATTAAAAAATGACAAAAAAAATGAAACCTGGGGTCAGGTTCCATTTTT 280 TTerm_0519 NZ_LR027880.1 3723479 3723491 13 3723500 3723512 13 8 84 0 16 46 53 45 54 0 3723495 TGATCCGTGAAAC GTTCCCCGGATCA True GAACCTTGT TTTTCCAGT False True + TGATCCGTGAAAC CTGGCTGT GTTCCCCGGATCA TTTTCCAGT 64 RIL182_RS17465 intergenic 3723357 3723574 - down AGATAATTAATAGTCTGTTTGAAAACAGATGGATTACTTTGAATGAAAACAGAACTGGAAAATGATCCGGGGAACACAGCCAGGTTTCACGGATCACAAGGTTCTGTTTCCTTTTTACATAATATGAAAACGATTCCGGTAGCGTTTCTACGATGAATTACAGGACAGAAAAAGTACATGTAACACAAAATATTATTTTTCCAGGGGGCAGGAGAAG TAGTATATTGGGGTAAAGCATACTAAGATAATTAATAGTCTGTTTGAAAACAGATGGATTACTTTGAATGAAAACAGAACTGGAAAATGATCCGGGGAACACAGCCAGGTTTCACGGATCACAAGGTTCTGTTTCCTTTTTACATAATATGAAAACGATTCCGGTAGCGTTTCTACGATGAATTACAGGACAGAAAAAGTACATGTAACACAAAATATTATTTTTCCAGGGGGCAGGAGAAGATGATAGAAAAATATTATGATGGTG CTTCTCCTGCCCCCTGGAAAAATAATATTTTGTGTTACATGTACTTTTTCTGTCCTGTAATTCATCGTAGAAACGCTACCGGAATCGTTTTCATATTATGTAAAAAGGAAACAGAACCTTGTGATCCGTGAAACCTGGCTGTGTTCCCCGGATCA 155 TTerm_0520 NZ_LR027880.1 3726303 3726315 13 3726321 3726333 13 5 92 0 21 26 73 25 75 0 3726317 GGCGCGGAAGCCA TGACTTCCGCGCC True GGCAATAAG ATTTTTCTT False True + GGCGCGGAAGCCA TTTTC TGACTTCCGCGCC ATTTTTCTT 58 RIL182_RS17480 intergenic 3725966 3726546 - down GTTTTTATCCCAAATATTCTCCGACTATTTGGGGTGTAGGATACCGCTTTAAACTTTAGTTTTTATCCCAAATATTCTCCGACTATTTGGGGTGTAGGATACCGTTTTAAACTTTAGTTTTTATCCCAAATATTCTCCGACTATTTGGGGTGTAGGATATACATTTAAACTGTAAAGGTTTTTTATTTTGCATGTATCAGTGAAAAGAAAAATGGCGCGGAAGTCAGAAAATGGCTTCCGCGCCTTATTGCCAGTACATCGTTTTCAAAGAAGTAATATGAATTTGATGAAAGTACAGATCAGAAACGGAAGATTTTGATCATTTGATTGATAAGAAAGAAGCGATTAACCGTCTTCGCTATGAAAAGCCGGATATGCAGATTTGCTTTCGGACAGAAGATGCTTTGAAAAAGCTGCATTTCCGACATGCATTGCATGAGTGATGGATATCTTGCAGAAGAGCTTGAGATAGAGTATAAAAAGGGTATATAATAAAAAAGTTCGGGTTCAGATAACAGGACAGAAAAACAGGGCACATTTTTCATATCCCGATCAATATGGGATAAGCGAGGAAACACAA TTGTGTTTCCTCGCTTATCCCATATTGATCGGGATATGAAAAATGTGCCCTGTTTTTCTGTCCTGTTATCTGAACCCGAACTTTTTTATTATATACCCTTTTTATACTCTATCTCAAGCTCTTCTGCAAGATATCCATCACTCATGCAATGCATGTCGGAAATGCAGCTTTTTCAAAGCATCTTCTGTCCGAAAGCAAATCTGCATATCCGGCTTTTCATAGCGAAGACGGTTAATCGCTTCTTTCTTATCAATCAAATGATCAAAATCTTCCGTTTCTGATCTGTACTTTCATCAAATTCATATTACTTCTTTGAAAACGATGTACTGGCAATAAGGCGCGGAAGCCATTTTCTGACTTCCGCGCC 367 TTerm_0521 NZ_LR027880.1 3728890 3728895 6 3728901 3728906 6 5 100 0 12 83 16 83 16 0 3728897 ATATCT AGATAT True TATTTCAGA TTTTTTAAT False True + ATATCT CTTAC AGATAT TTTTTTAAT 32 RIL182_RS17490 intergenic 3728715 3728897 - down AGAGATATCTGAAATACAAAACTCATTTGTCTTCACAAAAAGTTTAGACAATTTTATATAAATTAAATGGGATTTGAAATTTTTCATGCTATAATAGGTCATAAAGGTATGTTTATGAAGGTCATAAAATACCCTTATGACCTTTTTTGTGGGAACAGAAACCGGAAAGGCGAACATGTAAT CTGAGACATTAAAAAAATATCTGTAAGAGATATCTGAAATACAAAACTCATTTGTCTTCACAAAAAGTTTAGACAATTTTATATAAATTAAATGGGATTTGAAATTTTTCATGCTATAATAGGTCATAAAGGTATGTTTATGAAGGTCATAAAATACCCTTATGACCTTTTTTGTGGGAACAGAAACCGGAAAGGCGAACATGTAATATGAAACTGAAATCAAAAATCATCA ATTACATGTTCGCCTTTCCGGTTTCTGTTCCCACAAAAAAGGTCATAAGGGTATTTTATGACCTTCATAAACATACCTTTATGACCTATTATAGCATGAAAAATTTCAAATCCCATTTAATTTATATAAAATTGTCTAAACTTTTTGTGAAGACAAATGAGTTTTGTATTTCAGATATCTCTTACAGATAT 191 TTerm_0522 NZ_LR027880.1 3736153 3736168 16 3736175 3736190 16 6 93 0 27 65 34 66 33 0 3736171 AAAAAAACGTCGAAAG CTTTCGACGTTTTCTT True ATTTTCATA TTTACTCTG True True + AAAAAAACGTCGAAAG ACTGTG CTTTCGACGTTTTCTT TTTACTCTG 78 RIL182_RS17525 intergenic 3736118 3736192 - down AAAAGAAAACGTCGAAAGCACAGTCTTTCGACGTTTTTTTATGAAAATGGGAAGTTTATAGCGGGAGAAAACAG GCACGACGGAGCAGGCAACAGAGTAAAAAGAAAACGTCGAAAGCACAGTCTTTCGACGTTTTTTTATGAAAATGGGAAGTTTATAGCGGGAGAAAACAGATGAAAAAAGACAATATCGTACTGA CTGTTTTCTCCCGCTATAAACTTCCCATTTTCATAAAAAAACGTCGAAAGACTGTGCTTTCGACGTTTTCTT 72 TTerm_0523 NZ_LR027880.1 3751664 3751681 18 3751688 3751705 18 6 83 0 21 58 41 60 40 0 3751684 TATCAAAAAAGCCGGTAC GTGCCGGCTTTTCTTATA True TTCTGAAAT CAATGGAAT True True + TATCAAAAAAGCCGGTAC TTTTTC GTGCCGGCTTTTCTTATA CAATGGAAT 82 RIL182_RS17580 intergenic 3751651 3751820 + down TTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCC TAAATACAAGGCAGAGCAGAAATAATTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCCTAAAACAGATCAACTCTTCCTGCAA TTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATA 54 TTerm_0524 NZ_LR027880.1 3751664 3751681 18 3751688 3751705 18 6 83 0 21 58 41 60 40 0 3751684 TATCAAAAAAGCCGGTAC GTGCCGGCTTTTCTTATA True TTCTGAAAT CAATGGAAT True True + TATCAAAAAAGCCGGTAC TTTTTC GTGCCGGCTTTTCTTATA CAATGGAAT 82 RIL182_RS17585 intergenic 3751651 3751820 - down GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAA TTGCAGGAAGAGTTGATCTGTTTTAGGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAATTATTTCTGCTCTGCCTTGTATTTA TTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATA 54 TTerm_0525 NZ_LR027880.1 3769030 3769051 22 3769057 3769078 22 5 90 0 34 72 27 75 25 0 3769053 AAAACAAGAAGAAAAATTGAGA TCTCACTTTCTCTTCTTGTTTT True CAATTAAAA CTCTGATGA True True + AAAACAAGAAGAAAAATTGAGA CTCTT TCTCACTTTCTCTTCTTGTTTT CTCTGATGA 92 RIL182_RS17660 intergenic 3768887 3769107 - down ATGAAGTGGGGAAAGTTGAATCATCAGAGAAAACAAGAAGAGAAAGTGAGAAAGAGTCTCAATTTTTCTTCTTGTTTTTTTAATTGATGTTCGGTATACTGAACGATAGTTAGACAAAACTAACAATAGTGTAAATCATGCAGACTCCGGAACCGGAAAGTTGCTACCTTTCCTGCTCCGGTGGGATTGTCTGCAAACGAAGAAAAAGGAGACAGCGGGA CAAGATTTAAAATTAAGGGAAGCTGATGAAGTGGGGAAAGTTGAATCATCAGAGAAAACAAGAAGAGAAAGTGAGAAAGAGTCTCAATTTTTCTTCTTGTTTTTTTAATTGATGTTCGGTATACTGAACGATAGTTAGACAAAACTAACAATAGTGTAAATCATGCAGACTCCGGAACCGGAAAGTTGCTACCTTTCCTGCTCCGGTGGGATTGTCTGCAAACGAAGAAAAAGGAGACAGCGGGAATGAATTATTTAGAGATTGAAAAAG TCCCGCTGTCTCCTTTTTCTTCGTTTGCAGACAATCCCACCGGAGCAGGAAAGGTAGCAACTTTCCGGTTCCGGAGTCTGCATGATTTACACTATTGTTAGTTTTGTCTAACTATCGTTCAGTATACCGAACATCAATTAAAAAAACAAGAAGAAAAATTGAGACTCTTTCTCACTTTCTCTTCTTGTTTT 191 TTerm_0526 NZ_LR027880.1 3769964 3769969 6 3769974 3769979 6 4 100 0 12 83 16 83 16 0 3769971 TAGTTA TAACTA True TCATTTGTT TTTTTATGA False True + TAGTTA CTTC TAACTA TTTTTATGA 32 RIL182_RS17665 intergenic 3769928 3770241 - down ACACCTGTTGTCAGGCTGTGAGCCAGAAACTAAAGTATGTGAGGTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATAGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACTGTGAGGTTACAGAAGAATCACTCCAAAACAGAATGACTTTACACCACCCGATACAAGTGCTATCATAAAAATAGTTAGAAGTAACTAACAAATGAGAAGCATTTTAAAGAAGGTGGAATCCT GGGTTACGGATTATTCGCAAGCTTGACACCTGTTGTCAGGCTGTGAGCCAGAAACTAAAGTATGTGAGGTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATAGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACTGTGAGGTTACAGAAGAATCACTCCAAAACAGAATGACTTTACACCACCCGATACAAGTGCTATCATAAAAATAGTTAGAAGTAACTAACAAATGAGAAGCATTTTAAAGAAGGTGGAATCCTATGAAAGTATATTGTTTTGGTGAGA AGGATTCCACCTTCTTTAAAATGCTTCTCATTTGTTAGTTACTTCTAACTA 51 TTerm_0527 NZ_LR027880.1 3779630 3779638 9 3779644 3779652 9 5 88 0 13 50 50 50 50 0 3779640 AACCCTCTG CAGAGGATT True AAAATGCGA TTACTCCTC True True + AACCCTCTG GTGAG CAGAGGATT TTACTCCTC 58 RIL182_RS17705 intergenic 3779544 3779662 - down AGAGGAGTAAAATCCTCTGCTCACCAGAGGGTTCGCATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCACCAGGGGGTTCGCATTTTGCTCCGCAAAACAAGGAGGATTATA GACACTATGGAATTGAAGTGGCATAAGAGGAGTAAAATCCTCTGCTCACCAGAGGGTTCGCATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCACCAGGGGGTTCGCATTTTGCTCCGCAAAACAAGGAGGATTATAATGTCAATTAGTTTACAGAAAGGAC TATAATCCTCCTTGTTTTGCGGAGCAAAATGCGAACCCCCTGGTGAGCAGAGGATTTTACTCCTTGTTTTGCGGAGCAAAATGCGAACCCTCTGGTGAGCAGAGGATT 108 TTerm_0528 NZ_LR027880.1 3799517 3799525 9 3799535 3799543 9 9 88 0 13 72 27 75 25 0 3799529 AGCATAAAT ATTTACGCT True TCTCACTCA TTTAATTCT False True + AGCATAAAT CCATCCTCC ATTTACGCT TTTAATTCT 34 RIL182_RS17790 intergenic 3799521 3799537 - down AATGGAGGATGGATTT AGAAGTTAGCAGAATTAAAAGCGTAAATGGAGGATGGATTTATGCTGAGTGAGATACAGACAACGC AAATCCATCCTCCATTTACGCT 22 TTerm_0529 NZ_LR027880.1 3810074 3810082 9 3810088 3810096 9 5 88 0 13 50 50 50 50 0 3810084 ACACGGACA TGTCCATGT True AGCAGACCA ACATTTTTA False True + ACACGGACA CATAA TGTCCATGT ACATTTTTA 50 RIL182_RS17825 intergenic 3810028 3810166 - down GAAAATAAAGATACTTTTTAGGCAGAGATGTAAGAAAAACATTTCTGTCTATTTTTTTACTTAAAAATGTACATGGACATTATGTGTCCGTGTGGTCTGCTAGAATGAGGATATCAAAAAACAAGGGAGGAAAATGAG AGCTGAGAGAAAAAAGGAAAGAGTAGAAAATAAAGATACTTTTTAGGCAGAGATGTAAGAAAAACATTTCTGTCTATTTTTTTACTTAAAAATGTACATGGACATTATGTGTCCGTGTGGTCTGCTAGAATGAGGATATCAAAAAACAAGGGAGGAAAATGAGATGGAAAAGAGAGAAGAAAAAAACA CTCATTTTCCTCCCTTGTTTTTTGATATCCTCATTCTAGCAGACCACACGGACACATAATGTCCATGT 68 TTerm_0530 NZ_LR027880.1 3813848 3813865 18 3813873 3813890 18 7 94 0 31 61 38 58 41 0 3813868 ACAAAAAGGATGCATCCT AGGAAGCATCCTTTTTGT True GTATACTGA TGTACATCT True True + ACAAAAAGGATGCATCCT GTAAACT AGGAAGCATCCTTTTTGT TGTACATCT 86 RIL182_RS17830 intergenic 3813800 3813871 + down GTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAAC GGCACTCGATGCAATTGCAGAATAAGTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAACTAGGAAGCATCCTTTTTGTTGTACA GTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAACTAGGAAGCATCCTTTTTGT 90 TTerm_0531 NZ_LR027880.1 3813848 3813865 18 3813873 3813890 18 7 94 0 31 61 38 58 41 0 3813868 ACAAAAAGGATGCATCCT AGGAAGCATCCTTTTTGT True GTATACTGA TGTACATCT True True + ACAAAAAGGATGCATCCT GTAAACT AGGAAGCATCCTTTTTGT TGTACATCT 86 RIL182_RS17835 intergenic 3813800 3813871 - down GTTTACAGGATGCATCCTTTTTGTCAGTATACGATTCTTATGTATTTCAATAAAAAGCAGTAAACTTTAAC TGTACAACAAAAAGGATGCTTCCTAGTTTACAGGATGCATCCTTTTTGTCAGTATACGATTCTTATGTATTTCAATAAAAAGCAGTAAACTTTAACTTATTCTGCAATTGCATCGAGTGCC GTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAACTAGGAAGCATCCTTTTTGT 90 TTerm_0532 NZ_LR027880.1 3839754 3839765 12 3839774 3839785 12 8 83 0 14 100 0 100 0 0 3839769 AAATTTTAAATT AATATAAATTTT True ATAATTAAA AATCTGTTA True True + AAATTTTAAATT CATTTCTT AATATAAATTTT AATCTGTTA 28 RIL182_RS17960 intergenic 3839709 3839876 - down AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATA TGTTGAAAGAATTAGTGTATATTTAAAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATAATGGATAGAATTGCATTAGTAATCG TATTCTCACCTCTGAAATTATCTTACGTTTTATTTCATAATTAAAAATTTTAAATTCATTTCTTAATATAAATTTT 76 TTerm_0533 NZ_LR027880.1 3851322 3851332 11 3851341 3851351 11 8 100 0 22 63 36 63 36 0 3851336 AAAAAGCAAGG CCTTGCTTTTT True TCTAACGCA ATCCAACAC True True + AAAAAGCAAGG CACTCAGA CCTTGCTTTTT ATCCAACAC 76 RIL182_RS18005 intergenic 3851197 3851414 - down AGCAGCAAAAAAATATAAGAGTAGAAAAAATATCAGAAGTTTAAGAAAAATTATGTGTTGGATAAAAAGCAAGGTCTGAGTGCCTTGCTTTTTGCGTTAGAACTTTTATAATACCAATTATAACTAAAAAACAGCATGCAAATGAGAAAAACCCACATTTAAATGTTGATTTAATGCGAAAAATACATATAATAGAAAAGAAGATGAGGTAGCAATT AGACATTGGAGAAGATGACAAGGTAAGCAGCAAAAAAATATAAGAGTAGAAAAAATATCAGAAGTTTAAGAAAAATTATGTGTTGGATAAAAAGCAAGGTCTGAGTGCCTTGCTTTTTGCGTTAGAACTTTTATAATACCAATTATAACTAAAAAACAGCATGCAAATGAGAAAAACCCACATTTAAATGTTGATTTAATGCGAAAAATACATATAATAGAAAAGAAGATGAGGTAGCAATTATGTTGATACAGTTTAGTTTTAAAA AATTGCTACCTCATCTTCTTTTCTATTATATGTATTTTTCGCATTAAATCAACATTTAAATGTGGGTTTTTCTCATTTGCATGCTGTTTTTTAGTTATAATTGGTATTATAAAAGTTCTAACGCAAAAAGCAAGGCACTCAGACCTTGCTTTTT 154 TTerm_0534 NZ_LR027880.1 3879028 3879038 11 3879048 3879058 11 9 90 0 17 40 59 40 60 0 3879042 ACCGGAAGAAG CTTCTCCCGGT True CAGAGATTA TTTCCAATT False True + ACCGGAAGAAG CAAGTAAAA CTTCTCCCGGT TTTCCAATT 58 RIL182_RS18205 intergenic 3878940 3879183 - down AGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATT GTAGAGACGGAAAAGCCTTAAAATAAGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATTATGGCTCGTTCATTAAAAAAAGGAC AATTTACCTCCTATTTTGTCAGTCCCCTTTACACACTGCCGTGTGTTTCCTCGGACTCCGAACATCTTGTTTATTATATCAGAGATTACCGGAAGAAGCAAGTAAAACTTCTCCCGGT 118 TTerm_0535 NZ_LR027880.1 3879161 3879176 16 3879181 3879196 16 4 100 0 32 68 31 68 31 0 3879178 AAGCCTTAAAATAAGC GCTTATTTTAAGGCTT True CTTCTTCCA TTCCGTCTC True True + AAGCCTTAAAATAAGC GCCA GCTTATTTTAAGGCTT TTCCGTCTC 80 RIL182_RS18205 intergenic 3878940 3879183 - down AGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATT GTAGAGACGGAAAAGCCTTAAAATAAGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATTATGGCTCGTTCATTAAAAAAAGGAC AATTTACCTCCTATTTTGTCAGTCCCCTTTACACACTGCCGTGTGTTTCCTCGGACTCCGAACATCTTGTTTATTATATCAGAGATTACCGGAAGAAGCAAGTAAAACTTCTCCCGGTTTTCCAATTTTTTATTATTTTTTTCAAAGACCGGAAGAAGCCGTCTCTTATCTCTCCCCGGATCACCGTTGTGAACCGGAAGAAACCGTCCTTGCTTCTTCCAAGCCTTAAAATAAGCGCCAGCTTATTTTAAGGCTT 256 TTerm_0536 NZ_LR027880.1 3891144 3891161 18 3891171 3891188 18 9 100 0 36 72 27 72 27 0 3891165 AAAAGGACTTTAGAAAAC GTTTTCTAAAGTCCTTTT True TACATATAA CCATATACC True True + AAAAGGACTTTAGAAAAC ATCTCCTCC GTTTTCTAAAGTCCTTTT CCATATACC 88 RIL182_RS18270 intergenic 3890851 3891215 - down GTGAATGCTCATTGGACCGGTATATGGAAAAGGACTTTAGAAAACGGAGGAGATGTTTTCTAAAGTCCTTTTTATATGTAAACCTGCCGGAAAATCTGGCAGGATTGTTTTTTGACGGAACTGACAGAACCCCAACCACCGAGTCGAAACTCAACAGCTCCTTTTGATGTTATTAATGATACGGAATAATTGTGACCATTTCTTGACTGGAAAATGAAGGAAATCTTAAAAACAGATGAGAAATTCATAAAGTCGCATAGGCGGGAAGGGGGAAATGAGGTATAATGTGCGTAAAAGTGGTTAACACAGGGCAGGAAATTTTGTCAGTGAAATCTACTGTGGAATTTTATAATGGAGAAAATTT GATATGGATCCGTGCCTGCAATATAGTGAATGCTCATTGGACCGGTATATGGAAAAGGACTTTAGAAAACGGAGGAGATGTTTTCTAAAGTCCTTTTTATATGTAAACCTGCCGGAAAATCTGGCAGGATTGTTTTTTGACGGAACTGACAGAACCCCAACCACCGAGTCGAAACTCAACAGCTCCTTTTGATGTTATTAATGATACGGAATAATTGTGACCATTTCTTGACTGGAAAATGAAGGAAATCTTAAAAACAGATGAGAAATTCATAAAGTCGCATAGGCGGGAAGGGGGAAATGAGGTATAATGTGCGTAAAAGTGGTTAACACAGGGCAGGAAATTTTGTCAGTGAAATCTACTGTGGAATTTTATAATGGAGAAAATTTATGAAAGAGTATCTGGAAAATGTGC AAATTTTCTCCATTATAAAATTCCACAGTAGATTTCACTGACAAAATTTCCTGCCCTGTGTTAACCACTTTTACGCACATTATACCTCATTTCCCCCTTCCCGCCTATGCGACTTTATGAATTTCTCATCTGTTTTTAAGATTTCCTTCATTTTCCAGTCAAGAAATGGTCACAATTATTCCGTATCATTAATAACATCAAAAGGAGCTGTTGAGTTTCGACTCGGTGGTTGGGGTTCTGTCAGTTCCGTCAAAAAACAATCCTGCCAGATTTTCCGGCAGGTTTACATATAAAAAGGACTTTAGAAAACATCTCCTCCGTTTTCTAAAGTCCTTTT 337 TTerm_0537 NZ_LR027880.1 3891983 3891994 12 3892003 3892014 12 8 100 0 24 75 25 75 25 0 3891998 AAAAGAGAAAGA TCTTTCTCTTTT True TAACCGAAA CCTGTTTTC True True + AAAAGAGAAAGA CCCGTTCA TCTTTCTCTTTT CCTGTTTTC 64 RIL182_RS18275 intergenic 3891943 3892032 - down GTACCAGATGAAAACAGGAAAAGAGAAAGATGAACGGGTCTTTCTCTTTTTTCGGTTAAGAGAGAAATTTGAGACAGATAGGGGATTTC GATGTGTAGAAGAATTTGTAGGCTAGTACCAGATGAAAACAGGAAAAGAGAAAGATGAACGGGTCTTTCTCTTTTTTCGGTTAAGAGAGAAATTTGAGACAGATAGGGGATTTCATGGAAAGAAAAGGACTCAGTGGAA GAAATCCCCTATCTGTCTCAAATTTCTCTCTTAACCGAAAAAAGAGAAAGACCCGTTCATCTTTCTCTTTT 71 TTerm_0538 NZ_LR027880.1 3894984 3894989 6 3894994 3894999 6 4 100 0 12 83 16 83 16 0 3894991 ATGTAA TTACAT True TCCTCGTTA TTTTTATTA False True + ATGTAA GCGG TTACAT TTTTTATTA 32 RIL182_RS18285 intergenic 3894956 3895102 - down ACTATGAGATGGGAAGCCGTCAATCCTTGAGAGATCATGGGTTGGCGGTTTTTCTTTGTTTAAAATATATTCCCTATTTGTCATATCTATGTTATAATAAAAAATGTAACCGCTTACATAACGAGGAAAGAAGGAGGATTTCATAA CGCAGGTTCAAATCCTGTCGCGCCGACTATGAGATGGGAAGCCGTCAATCCTTGAGAGATCATGGGTTGGCGGTTTTTCTTTGTTTAAAATATATTCCCTATTTGTCATATCTATGTTATAATAAAAAATGTAACCGCTTACATAACGAGGAAAGAAGGAGGATTTCATAAATGAAGAAAAAAACAAGTCTTAGTG TTATGAAATCCTCCTTCTTTCCTCGTTATGTAAGCGGTTACAT 43 TTerm_0539 NZ_LR027880.1 3905406 3905415 10 3905422 3905431 10 6 80 0 10 65 35 62 37 0 3905418 AAAATCCGCA TGCTGTTTTT True TGGGTGGCA ACACAGTGT True True + AAAATCCGCA TAAAAC TGCTGTTTTT ACACAGTGT 44 RIL182_RS18330 intergenic 3905101 3905646 - down AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAG TTGATAAAGTGGTAGGCAATGATTAAAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAGATGAACAATAAAACAACAAGAAACA CTTCTGCCTCTTTCTAAATCAATCATATTACTGTAAGTCCTGCCTATTACCTCTTTATTTCCTGCAGGCTCATTAGATAATAGTTTACCATTCTTTTGGAATAAATGCATCAGCAAAAACTGTTTTAGATAAAAAAAACCGCAACCCCTGATTGCTCAAGGATTGCGGAATACAATCTGCAATATATAATTTAAAATTATAAATTACTCGATAACTGTAGCAACACGTCCAGATCCTACTGTACGTCCACCCTCACGTTATTTGAATACCGTATTTCTGCATATTTTCTATGCTTTTGGGTGGCAAAATCCGCATAAAACTGCTGTTTTT 330 TTerm_0540 NZ_LR027880.1 3905601 3905615 15 3905621 3905635 15 5 80 0 15 70 30 66 33 0 3905617 TTTTTACCCTTATGA TCACAAGGGAAATAA True TTCCCTTAT GGGAATTTT False True + TTTTTACCCTTATGA GATAA TCACAAGGGAAATAA GGGAATTTT 46 RIL182_RS18330 intergenic 3905101 3905646 - down AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAG TTGATAAAGTGGTAGGCAATGATTAAAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAGATGAACAATAAAACAACAAGAAACA CTTCTGCCTCTTTCTAAATCAATCATATTACTGTAAGTCCTGCCTATTACCTCTTTATTTCCTGCAGGCTCATTAGATAATAGTTTACCATTCTTTTGGAATAAATGCATCAGCAAAAACTGTTTTAGATAAAAAAAACCGCAACCCCTGATTGCTCAAGGATTGCGGAATACAATCTGCAATATATAATTTAAAATTATAAATTACTCGATAACTGTAGCAACACGTCCAGATCCTACTGTACGTCCACCCTCACGTTATTTGAATACCGTATTTCTGCATATTTTCTATGCTTTTGGGTGGCAAAATCCGCATAAAACTGCTGTTTTTACACAGTGTATTTTTATTTGCTTAAGTTCTTGGCACCGTTTTGGCACCGTAGGTACTTCATCTTCCTTTACTACTATAAACTGGAATTTATATAATTATCTCTCTAACTTTCCCCATTTTATAGGCTTTCCCGCCTGTCCATTAGTGAAATGATATGTAGTTTCCCTTATTTTTACCCTTATGAGATAATCACAAGGGAAATAA 534 TTerm_0541 NZ_LR027880.1 3916433 3916450 18 3916460 3916477 18 9 100 0 36 66 33 66 33 0 3916454 ATAAAAGAAAGGACAGCA TGCTGTCCTTTCTTTTAT True GCAATTTTA CATAGCTGG True True + ATAAAAGAAAGGACAGCA GTGTCAAAT TGCTGTCCTTTCTTTTAT CATAGCTGG 96 RIL182_RS18385 intergenic 3916320 3916570 - down AGCAAGAAGTGAGATAGTGTTGTAGGGAGTTTCCTGTAGTTAAAGATACCACACCCGATATGATGAACCCACGCTTCTACACTACCAGCTATGATAAAAGAAAGGACAGCAATTTGACACTGCTGTCCTTTCTTTTATAAAATTGCAGTACACAGAAAAAAGCTGTAAAATGAAAAATATATTTGTCCTTGTAACAATTCTCGGACATTTGCCTGTTATACTATCTGCAAAAAGAAAAGGAAGTGATAAT CAGAAGATTCATTAGAACTTTATTAAGCAAGAAGTGAGATAGTGTTGTAGGGAGTTTCCTGTAGTTAAAGATACCACACCCGATATGATGAACCCACGCTTCTACACTACCAGCTATGATAAAAGAAAGGACAGCAATTTGACACTGCTGTCCTTTCTTTTATAAAATTGCAGTACACAGAAAAAAGCTGTAAAATGAAAAATATATTTGTCCTTGTAACAATTCTCGGACATTTGCCTGTTATACTATCTGCAAAAAGAAAAGGAAGTGATAATATGAAGCATATTTTAATTGTCGAAG ATTATCACTTCCTTTTCTTTTTGCAGATAGTATAACAGGCAAATGTCCGAGAATTGTTACAAGGACAAATATATTTTTCATTTTACAGCTTTTTTCTGTGTACTGCAATTTTATAAAAGAAAGGACAGCAGTGTCAAATTGCTGTCCTTTCTTTTAT 157 TTerm_0542 NZ_LR027880.1 3918153 3918166 14 3918172 3918185 14 5 78 0 13 67 32 63 36 0 3918168 CAAATTTTCCAGCT AGCTGAAATTTTTG True CATAAATTC TTATTCTAC False True + CAAATTTTCCAGCT CGACA AGCTGAAATTTTTG TTATTCTAC 50 RIL182_RS18395 intergenic 3918110 3918186 - down ACAAAAATTTCAGCTTGTCGAGCTGGAAAATTTGAATTTATGATAGCGGAACGAAATCTGTGGAGGGGGTGTTCTC GCTATATTGAAGGTATCGTAGAATAACAAAAATTTCAGCTTGTCGAGCTGGAAAATTTGAATTTATGATAGCGGAACGAAATCTGTGGAGGGGGTGTTCTCATGAAATTAGTCAGTCCGAAAACAT GAGAACACCCCCTCCACAGATTTCGTTCCGCTATCATAAATTCAAATTTTCCAGCTCGACAAGCTGAAATTTTTG 75 TTerm_0543 NZ_LR027880.1 3919494 3919519 26 3919524 3919549 26 4 73 0 17 73 26 73 26 0 3919521 CTCCATTTTTTCTCTTTATTTTTGTG CAAAAAATTTTAGAGCCAAAATAGAG True TTCACATTC CCACTCCAA False True + CTCCATTTTTTCTCTTTATTTTTGTG ATTA CAAAAAATTTTAGAGCCAAAATAGAG CCACTCCAA 42 RIL182_RS18410 intergenic 3919309 3919651 - down GACAAATTGAAATTGCAGACTTCCTTATTGATCATATCTAAACATGGTGCTAGCACCATGTAATAAAGGTAATTAAGGAGAAAATCGGTATTTTTGGAGTGGCTCTATTTTGGCTCTAAAATTTTTTGTAATCACAAAAATAAAGAGAAAAAATGGAGAATGTGAATAAAAATATGCAGTAAAATCAACGAAAAACATTCCGATTTAATTTCCTAAAGCTCGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATA ATGGACTAAAACCTATAATTATATAGACAAATTGAAATTGCAGACTTCCTTATTGATCATATCTAAACATGGTGCTAGCACCATGTAATAAAGGTAATTAAGGAGAAAATCGGTATTTTTGGAGTGGCTCTATTTTGGCTCTAAAATTTTTTGTAATCACAAAAATAAAGAGAAAAAATGGAGAATGTGAATAAAAATATGCAGTAAAATCAACGAAAAACATTCCGATTTAATTTCCTAAAGCTCGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCA TATTATCGCATGTAAAAAGGGTTCCGGAGAAATCTCCGAAACCCTTGAATTTACTGAATAATATTTAATTACTCGATAACTGTAGCAACACGTCCAGATCCTACTGTACGTCCACCCTCACGAGCTTTAGGAAATTAAATCGGAATGTTTTTCGTTGATTTTACTGCATATTTTTATTCACATTCTCCATTTTTTCTCTTTATTTTTGTGATTACAAAAAATTTTAGAGCCAAAATAGAG 240 TTerm_0544 NZ_LR027880.1 3926155 3926170 16 3926177 3926192 16 6 87 0 22 68 31 71 28 0 3926173 AAAAGCTCTGTTGAAT ATTCAACGGAGTTTTT True GGTAAGAAA CTTTTTGGC True True + AAAAGCTCTGTTGAAT AGCAAA ATTCAACGGAGTTTTT CTTTTTGGC 52 RIL182_RS18445 intergenic 3926151 3926302 + down GAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTTCTTTTTGGCACCGTTTTGGCACCGCTCACACCCATCTTCATTATTATCGCATGTAAAAAGGGTTCCGGAGAAATCTCCGAAACCCTTGAATTTACTGAATAATATTTAAT GGTAAAACAGATTAAGGGATGGTAAGAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTTCTTTTTGGCACCGTTTTGGCACCGCTCACACCCATCTTCATTATTATCGCATGTAAAAAGGGTTCCGGAGAAATCTCCGAAACCCTTGAATTTACTGAATAATATTTAATTACTCGATAACTGTAGCAACACGTC GAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTT 41 TTerm_0545 NZ_LR027880.1 3926155 3926170 16 3926177 3926192 16 6 87 0 22 68 31 71 28 0 3926173 AAAAGCTCTGTTGAAT ATTCAACGGAGTTTTT True GGTAAGAAA CTTTTTGGC True True + AAAAGCTCTGTTGAAT AGCAAA ATTCAACGGAGTTTTT CTTTTTGGC 52 RIL182_RS18450 intergenic 3926151 3926302 - down ATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTTTTTC GACGTGTTGCTACAGTTATCGAGTAATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTTTTTCTTACCATCCCTTAATCTGTTTTACC GAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTT 41 TTerm_0546 NZ_LR027880.1 3927559 3927565 7 3927571 3927577 7 5 100 0 14 85 14 85 14 0 3927567 TGATTAT ATAATCA True GCTAACTCT ATCGTTTTT False True + TGATTAT ATAAA ATAATCA ATCGTTTTT 36 RIL182_RS18455 intergenic 3927489 3927695 - down ATAGACCATCTTTTTTTCCTGTGGAAAAAGTTTTAGCAGATAAGTCAAAATAAGACTAAAACATCCGGATTTCCTATAAAATATAGGAAATCCGGTAAGAAATAGCTTGAAAAACGATTGATTATTTTATATAATCAGAGTTAGCCGAGTTATTGAAAATAACAACTATAGCCCATAGGGCATCATTTTAAGGAGGATATTCAAAA AGGTATTAGCAGACAAATCTAAATAATAGACCATCTTTTTTTCCTGTGGAAAAAGTTTTAGCAGATAAGTCAAAATAAGACTAAAACATCCGGATTTCCTATAAAATATAGGAAATCCGGTAAGAAATAGCTTGAAAAACGATTGATTATTTTATATAATCAGAGTTAGCCGAGTTATTGAAAATAACAACTATAGCCCATAGGGCATCATTTTAAGGAGGATATTCAAAAATGGCAAAAGCTAAGTTTGAAAGAA TTTTGAATATCCTCCTTAAAATGATGCCCTATGGGCTATAGTTGTTATTTTCAATAACTCGGCTAACTCTGATTATATAAAATAATCA 88 TTerm_0547 NZ_LR027880.1 3942866 3942871 6 3942876 3942881 6 4 100 0 12 66 33 66 33 0 3942873 GGTAAA TTTACC True ACGCGTCTG GTTTTGTTA False True + GGTAAA TTTC TTTACC GTTTTGTTA 40 RIL182_RS18520 intergenic 3942804 3943101 - down ATTCACTGGAAAACCCAGTGTGAGTCATGAAACATTTCTTTGAGAGTGTGGATTGAAAGAGTCATAAAACATTCTTTTGAGAGTGTAGAATGACGCAGAAGTTGCGTAGCAACTTCCAATGGCTTCGCGTAGCGAAGACTATGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAGACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGA CAAGAGTTCGAATCTCTCCATCTCCATTCACTGGAAAACCCAGTGTGAGTCATGAAACATTTCTTTGAGAGTGTGGATTGAAAGAGTCATAAAACATTCTTTTGAGAGTGTAGAATGACGCAGAAGTTGCGTAGCAACTTCCAATGGCTTCGCGTAGCGAAGACTATGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAGACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGT TCTTAACTAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTTAAAAACGCGTCTGGTAAATTTCTTTACC 77 TTerm_0548 NZ_LR027880.1 3943284 3943290 7 3943295 3943301 7 4 100 0 14 85 14 85 14 0 3943292 AATCAAA TTTGATT True ATAAGCCCA TTTTAATCT False True + AATCAAA ATAA TTTGATT TTTTAATCT 36 RIL182_RS18530 intergenic 3943283 3943307 - down TTAAAAAATCAAATTATTTTGATT TATGGGAAAGCAGGTGGCTGCCAGATTAAAAAATCAAATTATTTTGATTGGGCTTATAGCTCAGCCGGTTAGAG AATCAAAATAATTTGATT 18 TTerm_0549 NZ_LR027880.1 3959910 3959921 12 3959929 3959940 12 7 83 0 14 66 33 70 30 0 3959924 AGCATACCAAAT ATCTGATATGCT True TAAAAAAAA CATCTTTTT True True + AGCATACCAAAT ATCTAAC ATCTGATATGCT CATCTTTTT 44 RIL182_RS18605 intergenic 3959889 3959924 + down GCTGCTCCATATTAAAAAAAAGCATACCAAATATC CGGAGAGTATTGGGAGCAGCTGTGAGCTGCTCCATATTAAAAAAAAGCATACCAAATATCTAACATCTGATATGCTCATCTTTTT GCTGCTCCATATTAAAAAAAAGCATACCAAATATCTAACATCTGATATGCT 51 TTerm_0550 NZ_LR027880.1 3959910 3959921 12 3959929 3959940 12 7 83 0 14 66 33 70 30 0 3959924 AGCATACCAAAT ATCTGATATGCT True TAAAAAAAA CATCTTTTT True True + AGCATACCAAAT ATCTAAC ATCTGATATGCT CATCTTTTT 44 RIL182_RS22360 intergenic 3959889 3959924 - down GATATTTGGTATGCTTTTTTTTAATATGGAGCAGC AAAAAGATGAGCATATCAGATGTTAGATATTTGGTATGCTTTTTTTTAATATGGAGCAGCTCACAGCTGCTCCCAATACTCTCCG GCTGCTCCATATTAAAAAAAAGCATACCAAATATCTAACATCTGATATGCT 51 TTerm_0551 NZ_LR027880.1 3970850 3970857 8 3970862 3970869 8 4 87 0 11 75 25 71 28 0 3970859 AGTTTATC GAAAAACT True AGGGGGACA AATTATTTT False True + AGTTTATC TATG GAAAAACT AATTATTTT 30 RIL182_RS18660 intergenic 3970746 3971098 - down GAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGGGGGATCCATGCGAGAATTTCGATATCATCGCGAATAGACTATTTTAATAAGTTTTCATAAAAGGATTGGTAAAAAATAATTAGTTTTTCCATAGATAAACTGTCCCCCTGCCATAAAAAAGTTACAAATATATGATTAAGGATATTATAAGAGAGAGAAAATGGCAAGAAACAATTTTATGTGGACATACCTGGAGAAGAATAC AGATTTTATGTGAAAAAGGCGGATAGAAAATCAGCAGAAAAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGGGGGATCCATGCGAGAATTTCGATATCATCGCGAATAGACTATTTTAATAAGTTTTCATAAAAGGATTGGTAAAAAATAATTAGTTTTTCCATAGATAAACTGTCCCCCTGCCATAAAAAAGTTACAAATATATGATTAAGGATATTATAAGAGAGAGAAAATGGCAAGAAACAATTTTATGTGGACATACCTGGAGAAGAATACATGAATGAAAATAAAATCGCATTTA GTATTCTTCTCCAGGTATGTCCACATAAAATTGTTTCTTGCCATTTTCTCTCTCTTATAATATCCTTAATCATATATTTGTAACTTTTTTATGGCAGGGGGACAGTTTATCTATGGAAAAACT 123 TTerm_0552 NZ_LR027880.1 3982849 3982869 21 3982877 3982897 21 7 71 0 12 83 16 86 13 0 3982872 TTTAAAATCTGTTTCATAAAA TTTTTGGATACATTTTTTCAA True TTCCTCTTT GCCGTTCCC True True + TTTAAAATCTGTTTCATAAAA TTCTAGT TTTTTGGATACATTTTTTCAA GCCGTTCCC 32 RIL182_RS18720 intergenic 3982836 3982872 - down GAATTTTATGAAACAGATTTTAAAAAGAGGAAAAGA TTGAAAAAATGTATCCAAAAAACTAGAATTTTATGAAACAGATTTTAAAAAGAGGAAAAGAATGGAAATTTCAGAACAGTTGGCCA TCTTTTCCTCTTTTTAAAATCTGTTTCATAAAATTCTAGTTTTTTGGATACATTTTTTCAA 61 TTerm_0553 NZ_LR027880.1 4005605 4005631 27 4005638 4005664 27 6 81 0 29 72 27 72 27 0 4005634 TATATTATATAGAAAAAAAGCCGACAG CTGTCGGCTTTTTAATTATGTAGTATA True AATACTTCT CGCTACACT True True + TATATTATATAGAAAAAAAGCCGACAG CTTTTA CTGTCGGCTTTTTAATTATGTAGTATA CGCTACACT 90 RIL182_RS18825 intergenic 4005571 4005682 - down ATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAG AGGGTGTACTTTCTCTGTTACAGTAATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAGATGAACAAAGAAGAATTACTAGCAG CTTTTTCCCCAAATTATTTTTTCACAATACTTCTATATTATATAGAAAAAAAGCCGACAGCTTTTACTGTCGGCTTTTTAATTATGTAGTATA 93 TTerm_0554 NZ_LR027880.1 4006678 4006686 9 4006691 4006699 9 4 88 0 13 88 11 87 12 0 4006688 AGTAAAAAA TTTTTTTCT True TACTTTATA TTTTCTATC False True + AGTAAAAAA GAAA TTTTTTTCT TTTTCTATC 26 RIL182_RS18830 intergenic 4006500 4006721 - down GGAAAAAAATAGAGATAGAAAAAGAAAAAAATTTCTTTTTTACTATAAAGTATCGGGATGAACATCCGATATATAATACAAGTAAACAAAGTGATGATGAACATTACTTGAAAAAGTTACTTGGCAGTGGAACAGAATGGAGCGTACGGCCGGGAAGGAAAGCTGCAAAATTAAGACGATGCGGCATGGAAGCCGCAGTAAATTCAAGGAGGAAATGAATT CGGTGTTTACGGACAAGAAAAAATAGGAAAAAAATAGAGATAGAAAAAGAAAAAAATTTCTTTTTTACTATAAAGTATCGGGATGAACATCCGATATATAATACAAGTAAACAAAGTGATGATGAACATTACTTGAAAAAGTTACTTGGCAGTGGAACAGAATGGAGCGTACGGCCGGGAAGGAAAGCTGCAAAATTAAGACGATGCGGCATGGAAGCCGCAGTAAATTCAAGGAGGAAATGAATTATGGTAGTACAGCACAATATGACCG AATTCATTTCCTCCTTGAATTTACTGCGGCTTCCATGCCGCATCGTCTTAATTTTGCAGCTTTCCTTCCCGGCCGTACGCTCCATTCTGTTCCACTGCCAAGTAACTTTTTCAAGTAATGTTCATCATCACTTTGTTTACTTGTATTATATATCGGATGTTCATCCCGATACTTTATAGTAAAAAAGAAATTTTTTTCT 199 TTerm_0555 NZ_LR027880.1 4030241 4030257 17 4030264 4030280 17 6 100 0 34 70 29 70 29 0 4030260 AAGAAAAAACTGGATGT ACATCCAGTTTTTTCTT True TGAAGTATA TTTCAGTCA True True + AAGAAAAAACTGGATGT ATGAAA ACATCCAGTTTTTTCTT TTTCAGTCA 92 RIL182_RS18940 intergenic 4030136 4030369 - down GAAGATTTATTGGTGCTGATATGGTATCATGGATTGAAATAAAAAATGAATGCTCAGATCATGTTAATTACAAACTGGCATGACTGAAAAAGAAAAAACTGGATGTTTTCATACATCCAGTTTTTTCTTATACTTCATAACATCAGGATCCGGAAAGAAATTGATACAGAGTAACTGTTTGAAAAACTGCGCAGAAAATCAAACTGGTTGTCTGAAAAAGGAGAAAGTTAGTT AGATGCGCTGGGCAGTCCGGGCATAGAAGATTTATTGGTGCTGATATGGTATCATGGATTGAAATAAAAAATGAATGCTCAGATCATGTTAATTACAAACTGGCATGACTGAAAAAGAAAAAACTGGATGTTTTCATACATCCAGTTTTTTCTTATACTTCATAACATCAGGATCCGGAAAGAAATTGATACAGAGTAACTGTTTGAAAAACTGCGCAGAAAATCAAACTGGTTGTCTGAAAAAGGAGAAAGTTAGTTATGAGTAATATAAATAATACAAAAG AACTAACTTTCTCCTTTTTCAGACAACCAGTTTGATTTTCTGCGCAGTTTTTCAAACAGTTACTCTGTATCAATTTCTTTCCGGATCCTGATGTTATGAAGTATAAGAAAAAACTGGATGTATGAAAACATCCAGTTTTTTCTT 144 TTerm_0556 NZ_LR027880.1 4036888 4036899 12 4036908 4036919 12 8 100 0 24 58 41 58 41 0 4036903 AAAAAATCCGGG CCCGGATTTTTT True ATGAATACA TATGGTCTG True True + AAAAAATCCGGG CAGCAACA CCCGGATTTTTT TATGGTCTG 88 RIL182_RS18965 intergenic 4036653 4036934 - down AGTATCCAGACCATAAAAAAATCCGGGTGTTGCTGCCCGGATTTTTTGTATTCATGTACGATGTCAGCTCTGCTTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCCAGGGCGCGAAAGAGTCGCAAGCGACTCTTTGTTCCATATCAACTGATAGTTGATGCGTAAAAAGAAATAACAACCGGCACATGCTTGAAAAATCAACCATTAGTTTTATA CGATGAAGGGTGCCTATATGGACTAAGTATCCAGACCATAAAAAAATCCGGGTGTTGCTGCCCGGATTTTTTGTATTCATGTACGATGTCAGCTCTGCTTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCCAGGGCGCGAAAGAGTCGCAAGCGACTCTTTGTTCCATATCAACTGATAGTTGATGCGTAAAAAGAAATAACAACCGGCACATGCTTGAAAAATCAACCATTAGTTTTATAATGAAATTAGAAAAACGAGATGGGG TATAAAACTAATGGTTGATTTTTCAAGCATGTGCCGGTTGTTATTTCTTTTTACGCATCAACTATCAGTTGATATGGAACAAAGAGTCGCTTGCGACTCTTTCGCGCCCTGGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTAAAAAAGCAGAGCTGACATCGTACATGAATACAAAAAATCCGGGCAGCAACACCCGGATTTTTT 266 TTerm_0557 NZ_LR027880.1 4040379 4040395 17 4040402 4040418 17 6 94 0 29 73 26 75 25 0 4040398 AAAAAACAAGGTGTTTT AAAGCACCTTGTTTTTT True TTTAGACAA GTATATTTT True True + AAAAAACAAGGTGTTTT CCTAAA AAAGCACCTTGTTTTTT GTATATTTT 74 RIL182_RS18980 intergenic 4040257 4040483 - down AGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATC CAAAGGCGCAGCAAAAAAATGAGTAAGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATCATGGGTAACGTCGCAGAATTAGATA GATATACCTCCTTATTGATATTTGTATGACGTCTGATGTTTCATTGCGATTATTGTATTTTATTGATCATTTTTTGTCAATACATCTGATGTCTAGTTTGTTAAAACCTCTCTTTTAGACAAAAAAACAAGGTGTTTTCCTAAAAAAGCACCTTGTTTTTT 161 TTerm_0558 NZ_LR027880.1 4040399 4040404 6 4040413 4040418 6 8 100 0 12 100 0 100 0 0 4040408 AAAAAA TTTTTT True GTTTTCCTA GTATATTTT False True + AAAAAA GCACCTTG TTTTTT GTATATTTT 24 RIL182_RS18980 intergenic 4040257 4040483 - down AGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATC CAAAGGCGCAGCAAAAAAATGAGTAAGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATCATGGGTAACGTCGCAGAATTAGATA GATATACCTCCTTATTGATATTTGTATGACGTCTGATGTTTCATTGCGATTATTGTATTTTATTGATCATTTTTTGTCAATACATCTGATGTCTAGTTTGTTAAAACCTCTCTTTTAGACAAAAAAACAAGGTGTTTTCCTAAAAAAGCACCTTGTTTTTT 161 TTerm_0559 NZ_LR027880.1 4041213 4041220 8 4041229 4041236 8 8 87 0 11 56 43 57 42 0 4041224 GTGTGATG CATCATAC True TTTGTCCTG CACTTTTTG False True + GTGTGATG CATAAAGA CATCATAC CACTTTTTG 38 RIL182_RS18985 intergenic 4041187 4041269 - down AAAATTTTGCGTTCAAACATCCGGCAAAAAGTGGTATGATGTCTTTATGCATCACACAGGACAAAGGAGAAAATAATACAAT ATGACTATTTTGCGAAGGCACGTTAAAAATTTTGCGTTCAAACATCCGGCAAAAAGTGGTATGATGTCTTTATGCATCACACAGGACAAAGGAGAAAATAATACAATATGGAAAAAAAGAGCCGGGAATTAT ATTGTATTATTTTCTCCTTTGTCCTGTGTGATGCATAAAGACATCATAC 49 TTerm_0560 NZ_LR027880.1 4063802 4063817 16 4063823 4063838 16 5 87 0 22 53 46 50 50 0 4063819 ATTGCCGCACCAAAGT ACTTTAGTGCGGCTAT True ATGATGAAA ATTCATTTT False True + ATTGCCGCACCAAAGT TTTGC ACTTTAGTGCGGCTAT ATTCATTTT 52 RIL182_RS19075 intergenic 4063574 4063882 - down AAGAAATTTAGACAGTAGAAATCCTGTTTTACAGGAAAATGAATATAGCCGCACTAAAGTGCAAAACTTTGGTGCGGCAATTTCATCATATTGTTGACGCTATAGGAAATGAGGCAGGAATTTCCTATGTCGTGAACGGAAAAACAAGGAGGAAAATCCTCTGCTCCTGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGGCATTTTCCTTCGGAAAACTAAAGGAGGAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACTAAAGGAGGATTAGAAC ACAAAGATGCTGTAAAGACTGAATAAAGAAATTTAGACAGTAGAAATCCTGTTTTACAGGAAAATGAATATAGCCGCACTAAAGTGCAAAACTTTGGTGCGGCAATTTCATCATATTGTTGACGCTATAGGAAATGAGGCAGGAATTTCCTATGTCGTGAACGGAAAAACAAGGAGGAAAATCCTCTGCTCCTGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGGCATTTTCCTTCGGAAAACTAAAGGAGGAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACTAAAGGAGGATTAGAACGTGAAAAAATATGCACTTAAGAGAA GTTCTAATCCTCCTTTAGTTTTGCGGAGCAAAATGCGACTGCCTTTGCAGGAGCAGAGGATTTTCCTCCTTTAGTTTTCCGAAGGAAAATGCCTGCTATGCATGCTATGCTCAATAGCTTGCATAGCATGTGCCTCTTGCAGGAGCAGAGGATTTTCCTCCTTGTTTTTCCGTTCACGACATAGGAAATTCCTGCCTCATTTCCTATAGCGTCAACAATATGATGAAATTGCCGCACCAAAGTTTTGCACTTTAGTGCGGCTAT 264 TTerm_0561 NZ_LR027880.1 4092168 4092179 12 4092186 4092197 12 6 91 0 19 70 29 72 27 0 4092182 CATTATTGTCTT AAGACGATAATG True TTTTATATC TATTTTATT False True + CATTATTGTCTT GTGTGT AAGACGATAATG TATTTTATT 62 RIL182_RS19195 intergenic 4091893 4092296 - down ATAAATTTTAAAGTACCGTGATGATGCTCTCCCTCTTTTGGAGTTATTGAATGTGATATTCCTTTCCATACAAATAACATAGATAGATCAAATAAAATACATTATCGTCTTACACACAAGACAATAATGATATAAAATTGTCTTGCAAACATATTGGCGGGCATATGAACAGAGATTGCCGAAAACAAATCATGATTGATCAAAAAGAAATATACCTGAAGAGGAATTAAAAAATATCCTGGAAGAAAATGACGAGTCGATAGAGGAAGAGATTTATGAATATAAGTTGATGCCGGAGATATTTTGGTGAAAGTTTGAAAGAGAAGCAGTCTGGTTTCCCTCTTGACATCCACTCCACCCCGCAATACAATACTTGCATATGCAACTATTGGAGGTGCAAGTA TAAGTGAAATCAAAAACTGTAAATGATAAATTTTAAAGTACCGTGATGATGCTCTCCCTCTTTTGGAGTTATTGAATGTGATATTCCTTTCCATACAAATAACATAGATAGATCAAATAAAATACATTATCGTCTTACACACAAGACAATAATGATATAAAATTGTCTTGCAAACATATTGGCGGGCATATGAACAGAGATTGCCGAAAACAAATCATGATTGATCAAAAAGAAATATACCTGAAGAGGAATTAAAAAATATCCTGGAAGAAAATGACGAGTCGATAGAGGAAGAGATTTATGAATATAAGTTGATGCCGGAGATATTTTGGTGAAAGTTTGAAAGAGAAGCAGTCTGGTTTCCCTCTTGACATCCACTCCACCCCGCAATACAATACTTGCATATGCAACTATTGGAGGTGCAAGTAATGTTAAAACGAGTTTTTTCTTATA TACTTGCACCTCCAATAGTTGCATATGCAAGTATTGTATTGCGGGGTGGAGTGGATGTCAAGAGGGAAACCAGACTGCTTCTCTTTCAAACTTTCACCAAAATATCTCCGGCATCAACTTATATTCATAAATCTCTTCCTCTATCGACTCGTCATTTTCTTCCAGGATATTTTTTAATTCCTCTTCAGGTATATTTCTTTTTGATCAATCATGATTTGTTTTCGGCAATCTCTGTTCATATGCCCGCCAATATGTTTGCAAGACAATTTTATATCATTATTGTCTTGTGTGTAAGACGATAATG 304 TTerm_0562 NZ_LR027880.1 4095412 4095421 10 4095429 4095438 10 7 80 0 10 90 10 100 0 0 4095424 AAATTCTTAT ATAAACATTT True ATAGTCAGA TGTTTATCT False True + AAATTCTTAT ACAGCGG ATAAACATTT TGTTTATCT 28 RIL182_RS19225 intergenic 4095385 4095548 - down AACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAA TAAGCTTTCTATATAGAGCAGCTTAAACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAAATGACATTGGGAGTAATCCTGCGTC TTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATTT 53 TTerm_0563 NZ_LR027880.1 4096905 4096922 18 4096927 4096944 18 4 100 0 36 55 44 55 44 0 4096924 GGTCGCTCTAACTATCTT AAGATAGTTAGAGCGACC True ATTACAAGG GCACATTTT False True + GGTCGCTCTAACTATCTT AAAA AAGATAGTTAGAGCGACC GCACATTTT 80 RIL182_RS19230 intergenic 4096861 4097174 - down AAAGAGGCTTTATACGTGAATGTAAAGAGGCGGTGCAGATATGAAGGTTGAAGCAGCGAAAGAAGTGCCAATGGTAAGGACAGATAAAGCCAGATAGTAATTGGGGCGTGGGAGTAATCCCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACG TTGAAAAGGACGAACAAAGCATGTGAAAGAGGCTTTATACGTGAATGTAAAGAGGCGGTGCAGATATGAAGGTTGAAGCAGCGAAAGAAGTGCCAATGGTAAGGACAGATAAAGCCAGATAGTAATTGGGGCGTGGGAGTAATCCCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACGATGAATTATTCTACAGAGGTAAAAC CGTGTAATTCTCCTTGCAATCAAGATATTTTCTTAATTACAAGGGTCGCTCTAACTATCTTAAAAAAGATAGTTAGAGCGACC 83 TTerm_0564 NZ_LR027880.1 4098210 4098223 14 4098231 4098244 14 7 100 0 28 64 35 64 35 0 4098226 AAAATCCATGTTCC GGAACATGGATTTT True TTATAATAA GTGGTAATG True True + AAAATCCATGTTCC TTAAATT GGAACATGGATTTT GTGGTAATG 80 RIL182_RS19235 intergenic 4097989 4098268 - down AATTATTAATTACCCCATTACCACAAAATCCATGTTCCAATTTAAGGAACATGGATTTTTATTATAATATATTTAAATATTATTGTTTAAAGTTCGTAAACGCTCCATACGTTTACATTCCGTCTTTATCGTTTCCTCAATCGGAATTTGTGAGGATAAAATGCAACTTAGAAAATACACAACTTATGACTGTGGGTATTTGGCTGAATTGTTTATTTTCATAAAATGTGTTACAATCAAGTTAGCCGAAACTAATTATATTGCAAAAAAGGTAAATGT CATATGATGTGGCATGTGAAATATAAATTATTAATTACCCCATTACCACAAAATCCATGTTCCAATTTAAGGAACATGGATTTTTATTATAATATATTTAAATATTATTGTTTAAAGTTCGTAAACGCTCCATACGTTTACATTCCGTCTTTATCGTTTCCTCAATCGGAATTTGTGAGGATAAAATGCAACTTAGAAAATACACAACTTATGACTGTGGGTATTTGGCTGAATTGTTTATTTTCATAAAATGTGTTACAATCAAGTTAGCCGAAACTAATTATATTGCAAAAAAGGTAAATGTATGAGTGAAAGAATAAAACCTACTA ACATTTACCTTTTTTGCAATATAATTAGTTTCGGCTAACTTGATTGTAACACATTTTATGAAAATAAACAATTCAGCCAAATACCCACAGTCATAAGTTGTGTATTTTCTAAGTTGCATTTTATCCTCACAAATTCCGATTGAGGAAACGATAAAGACGGAATGTAAACGTATGGAGCGTTTACGAACTTTAAACAATAATATTTAAATATATTATAATAAAAATCCATGTTCCTTAAATTGGAACATGGATTTT 255 TTerm_0565 NZ_LR027880.1 4111315 4111337 23 4111345 4111367 23 7 86 0 31 63 36 65 35 0 4111340 AAAAAATAACTCCCCATCCCTCA TGAGAGATGGAGAGTTACTTTTT True TATATTTGA ACGCTGCAA True True + AAAAAATAACTCCCCATCCCTCA CAATATC TGAGAGATGGAGAGTTACTTTTT ACGCTGCAA 86 RIL182_RS19300 intergenic 4111267 4111366 - down AAAAGTAACTCTCCATCTCTCAGATATTGTGAGGGATGGGGAGTTATTTTTTCAAATATAGTTCAACGGCATCTTAATTATTGATACTCTTTTCTCTGC GGGAAATCCCGGAGATTGCAGCGTAAAAAGTAACTCTCCATCTCTCAGATATTGTGAGGGATGGGGAGTTATTTTTTCAAATATAGTTCAACGGCATCTTAATTATTGATACTCTTTTCTCTGCCTGCCAAGTATCCTAACACCGTCAA GCAGAGAAAAGAGTATCAATAATTAAGATGCCGTTGAACTATATTTGAAAAAATAACTCCCCATCCCTCACAATATCTGAGAGATGGAGAGTTACTTTTT 100 TTerm_0566 NZ_LR027880.1 4111748 4111755 8 4111761 4111768 8 5 87 0 11 56 43 57 42 0 4111757 AGGCAGAT ATCTGTCT True GCGTTATGA TTTTGTCAT False True + AGGCAGAT ATGCA ATCTGTCT TTTTGTCAT 38 RIL182_RS19305 intergenic 4111617 4111950 - down ATGTAGTTTATTAGATAATCAATGTCATTTAGATAAGGTTTTTTATGATGAAAACAGTATATCATATGCGTTCATGCATTGAAAATACTGTTCAGTTAAGAAATGCTGTATTTTTTTGGTACACTAATGCGTAGAAAGCAGGTGTATGATGAGTTCAAATCATTTTTTTGTGTATGACAAAAAGACAGATTGCATATCTGCCTCATAACGCAGTATAATGGTAACGAGATTTATGCAACTCGATACATGAAATCCCTATTTCTCTTTGGACGGAGGTGGATAGGATATTTTCGATTGTACCTGACAGATGTCAGATACTTTTGTATGAGAAGC TTATGGATATTTTAGACAGAAAATAATGTAGTTTATTAGATAATCAATGTCATTTAGATAAGGTTTTTTATGATGAAAACAGTATATCATATGCGTTCATGCATTGAAAATACTGTTCAGTTAAGAAATGCTGTATTTTTTTGGTACACTAATGCGTAGAAAGCAGGTGTATGATGAGTTCAAATCATTTTTTTGTGTATGACAAAAAGACAGATTGCATATCTGCCTCATAACGCAGTATAATGGTAACGAGATTTATGCAACTCGATACATGAAATCCCTATTTCTCTTTGGACGGAGGTGGATAGGATATTTTCGATTGTACCTGACAGATGTCAGATACTTTTGTATGAGAAGCAAGGCCAACCAGAAGCGCCTGCACG GCTTCTCATACAAAAGTATCTGACATCTGTCAGGTACAATCGAAAATATCCTATCCACCTCCGTCCAAAGAGAAATAGGGATTTCATGTATCGAGTTGCATAAATCTCGTTACCATTATACTGCGTTATGAGGCAGATATGCAATCTGTCT 151 TTerm_0567 NZ_LR027880.1 4115403 4115411 9 4115417 4115425 9 5 88 0 13 61 38 62 37 0 4115413 AAGGCAGAT ATCTGTCTT True TGCATTATA TTTGTCATA False True + AAGGCAGAT AAGCA ATCTGTCTT TTTGTCATA 42 RIL182_RS19320 intergenic 4115351 4115584 + down GGATTTCATGTATCGGGTTGCATAAATCTCGTTACCATTATACTGCATTATAAGGCAGATAAGCAATCTGTCTTTTTGTCATAAAAAATCTTATCTAAATGACATTGAATGATTTATTTTCTATCTAAAATTTTATTAAACCGACTAAAGACTCCATAGTTTGTGTGTTTGACTTAATGTTTATATCTATCTTCTCCTAAATATTTTTCTAGTCATTGCAATATAAAATTGCT GCCACCTCCGTCCAAAGAGAAATAGGGATTTCATGTATCGGGTTGCATAAATCTCGTTACCATTATACTGCATTATAAGGCAGATAAGCAATCTGTCTTTTTGTCATAAAAAATCTTATCTAAATGACATTGAATGATTTATTTTCTATCTAAAATTTTATTAAACCGACTAAAGACTCCATAGTTTGTGTGTTTGACTTAATGTTTATATCTATCTTCTCCTAAATATTTTTCTAGTCATTGCAATATAAAATTGCTTATACAGTCTCTCCCTTAAGAGTCC GGATTTCATGTATCGGGTTGCATAAATCTCGTTACCATTATACTGCATTATAAGGCAGATAAGCAATCTGTCTT 74 TTerm_0568 NZ_LR027880.1 4115403 4115411 9 4115417 4115425 9 5 88 0 13 61 38 62 37 0 4115413 AAGGCAGAT ATCTGTCTT True TGCATTATA TTTGTCATA False True + AAGGCAGAT AAGCA ATCTGTCTT TTTGTCATA 42 RIL182_RS19325 intergenic 4115351 4115584 - down AGCAATTTTATATTGCAATGACTAGAAAAATATTTAGGAGAAGATAGATATAAACATTAAGTCAAACACACAAACTATGGAGTCTTTAGTCGGTTTAATAAAATTTTAGATAGAAAATAAATCATTCAATGTCATTTAGATAAGATTTTTTATGACAAAAAGACAGATTGCTTATCTGCCTTATAATGCAGTATAATGGTAACGAGATTTATGCAACCCGATACATGAAATCC GGACTCTTAAGGGAGAGACTGTATAAGCAATTTTATATTGCAATGACTAGAAAAATATTTAGGAGAAGATAGATATAAACATTAAGTCAAACACACAAACTATGGAGTCTTTAGTCGGTTTAATAAAATTTTAGATAGAAAATAAATCATTCAATGTCATTTAGATAAGATTTTTTATGACAAAAAGACAGATTGCTTATCTGCCTTATAATGCAGTATAATGGTAACGAGATTTATGCAACCCGATACATGAAATCCCTATTTCTCTTTGGACGGAGGTGGC GGATTTCATGTATCGGGTTGCATAAATCTCGTTACCATTATACTGCATTATAAGGCAGATAAGCAATCTGTCTT 74 TTerm_0569 NZ_LR027880.1 4133767 4133772 6 4133779 4133784 6 6 100 0 12 66 33 66 33 0 4133775 ATCTGT ACAGAT True GGTTAGCTA TTTCTTTTT False True + ATCTGT TATTTC ACAGAT TTTCTTTTT 40 RIL182_RS22365 intergenic 4133356 4133812 - down ACAACTACTGTTTATACTAAAAAAGAAAATCTGTGAAATAACAGATAGCTAACCATTTAAGGATGGCGGTAGCGGAGCTTCCGCTGCCGCCTTTTCCTTACGAAAAGGATTTCTTCGGAAGTCCCTTTCCGAAAGGCGGCAAAAAAAGCGCTTTGCCGATTTTCGGAAAGAAATCGAACAAGGAGAAATCAAATGGACGAACAAGAAAAAGAAATTGAAGAAATACTCAGAACATTTGACAAAGCACCTTCGCCTTCGTCAGAGAATAGTGTTCAAAATCAAGCATAGCAAAACAATAAGCAGCCTCGGCAAATTTCCCAAAAACCAACTGACACCGAACGGATTGCCCGCACATCAAATCAAACAGAATACAAAAGACAAGCTCAGTCAAGCAAAGGCAGGTATCTCTCCCCTACACGCAAAACCGCAATAAAGCGAAGAAAAAGGCAAAGAGCT GTTCGTCAGCGGCTTCGGAGTTGTGACAACTACTGTTTATACTAAAAAAGAAAATCTGTGAAATAACAGATAGCTAACCATTTAAGGATGGCGGTAGCGGAGCTTCCGCTGCCGCCTTTTCCTTACGAAAAGGATTTCTTCGGAAGTCCCTTTCCGAAAGGCGGCAAAAAAAGCGCTTTGCCGATTTTCGGAAAGAAATCGAACAAGGAGAAATCAAATGGACGAACAAGAAAAAGAAATTGAAGAAATACTCAGAACATTTGACAAAGCACCTTCGCCTTCGTCAGAGAATAGTGTTCAAAATCAAGCATAGCAAAACAATAAGCAGCCTCGGCAAATTTCCCAAAAACCAACTGACACCGAACGGATTGCCCGCACATCAAATCAAACAGAATACAAAAGACAAGCTCAGTCAAGCAAAGGCAGGTATCTCTCCCCTACACGCAAAACCGCAATAAAGCGAAGAAAAAGGCAAAGAGCTGTGATTGTTTCGTTATTAGCACTCC AGCTCTTTGCCTTTTTCTTCGCTTTATTGCGGTTTTGCGTGTAGGGGAGAGATACCTGCCTTTGCTTGACTGAGCTTGTCTTTTGTATTCTGTTTGATTTGATGTGCGGGCAATCCGTTCGGTGTCAGTTGGTTTTTGGGAAATTTGCCGAGGCTGCTTATTGTTTTGCTATGCTTGATTTTGAACACTATTCTCTGACGAAGGCGAAGGTGCTTTGTCAAATGTTCTGAGTATTTCTTCAATTTCTTTTTCTTGTTCGTCCATTTGATTTCTCCTTGTTCGATTTCTTTCCGAAAATCGGCAAAGCGCTTTTTTTGCCGCCTTTCGGAAAGGGACTTCCGAAGAAATCCTTTTCGTAAGGAAAAGGCGGCAGCGGAAGCTCCGCTACCGCCATCCTTAAATGGTTAGCTATCTGTTATTTCACAGAT 428 TTerm_0570 NZ_LR027880.1 4148120 4148126 7 4148133 4148139 7 6 100 0 14 71 28 71 28 0 4148129 ATTTGTG CACAAAT True CATCTTACA TTTCACACT False True + ATTTGTG TGCCAG CACAAAT TTTCACACT 44 RIL182_RS19505 intergenic 4148067 4148147 - down GTGTGAAAATTTGTGCTGGCACACAAATGTAAGATGAGCAAAGAACAGTGTACCGGGTATGGATATTTTGGAGGAAACAG TGATGCTTGCAACGCTTGGAGATTAGTGTGAAAATTTGTGCTGGCACACAAATGTAAGATGAGCAAAGAACAGTGTACCGGGTATGGATATTTTGGAGGAAACAGATGAGGACACAGCTACTAGCGGCAT CTGTTTCCTCCAAAATATCCATACCCGGTACACTGTTCTTTGCTCATCTTACATTTGTGTGCCAGCACAAAT 72 TTerm_0571 NZ_LR027880.1 4154076 4154093 18 4154098 4154115 18 4 100 0 36 66 33 66 33 0 4154095 AAATAAAAATACCGCGCA TGCGCGGTATTTTTATTT True CTCACCTCA CTGTATTTT True True + AAATAAAAATACCGCGCA AATC TGCGCGGTATTTTTATTT CTGTATTTT 112 RIL182_RS19525 intergenic 4154011 4154188 + down TTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTTCTGTATTTTGTTTTTGTATATTACTTCTGATAACAGGCTAATAGGCTGTTTGCAAAGTGTACCTTCTAGTGTT GTTGAGTGCTACGATTCCGAGCTGATTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTTCTGTATTTTGTTTTTGTATATTACTTCTGATAACAGGCTAATAGGCTGTTTGCAAAGTGTACCTTCTAGTGTTTATTTATCACTTCCGCCAAAGAAGT TTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTT 104 TTerm_0572 NZ_LR027880.1 4154076 4154093 18 4154098 4154115 18 4 100 0 36 66 33 66 33 0 4154095 AAATAAAAATACCGCGCA TGCGCGGTATTTTTATTT True CTCACCTCA CTGTATTTT True True + AAATAAAAATACCGCGCA AATC TGCGCGGTATTTTTATTT CTGTATTTT 112 RIL182_RS19530 intergenic 4154011 4154188 - down AACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATTTGAGGTGAGCTGCCTTTTGTCACATGGATCTTCATAGAAAATTGTAGAGTCGTTACTTCAGGCAA ACTTCTTTGGCGGAAGTGATAAATAAACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATTTGAGGTGAGCTGCCTTTTGTCACATGGATCTTCATAGAAAATTGTAGAGTCGTTACTTCAGGCAATCAGCTCGGAATCGTAGCACTCAAC TTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTT 104 TTerm_0573 NZ_LR027880.1 4162449 4162459 11 4162469 4162479 11 9 90 0 17 50 50 50 50 0 4162463 TGCTGCTGTAA TTACCGCAGCA True ATTTTTTCT ATTTTATTT False True + TGCTGCTGTAA GCATCGTTT TTACCGCAGCA ATTTTATTT 58 RIL182_RS19575 intergenic 4162408 4162630 - down AAGCGGCTATTTCAGGTAAGAATGTATAATGGAATAAAAATGCAATCTTACAGGAATGTAAGATACGGCAGGGAAATGTAAGCTGGTTCGATGGCATACATTTCCCTGTTTTGCTATACTGGGTACAGTCCTTGAGAAAATGAAATAAAATTGCTGCGGTAAAAACGATGCTTACAGCAGCAGAAAAAATATGAGAGTAGAAAAGACGGGGAGGAACCTGAT TGGGAACGGTTGTAAAAATTGGTTAAAGCGGCTATTTCAGGTAAGAATGTATAATGGAATAAAAATGCAATCTTACAGGAATGTAAGATACGGCAGGGAAATGTAAGCTGGTTCGATGGCATACATTTCCCTGTTTTGCTATACTGGGTACAGTCCTTGAGAAAATGAAATAAAATTGCTGCGGTAAAAACGATGCTTACAGCAGCAGAAAAAATATGAGAGTAGAAAAGACGGGGAGGAACCTGATATGGCACTTTTAGAGGTAAATAATT ATCAGGTTCCTCCCCGTCTTTTCTACTCTCATATTTTTTCTGCTGCTGTAAGCATCGTTTTTACCGCAGCA 71 TTerm_0574 NZ_LR027880.1 4162567 4162574 8 4162579 4162586 8 4 100 0 16 75 25 75 25 0 4162576 ATCTTACA TGTAAGAT True CCTGCCGTA TGCATTTTT False True + ATCTTACA TTCC TGTAAGAT TGCATTTTT 48 RIL182_RS19575 intergenic 4162408 4162630 - down AAGCGGCTATTTCAGGTAAGAATGTATAATGGAATAAAAATGCAATCTTACAGGAATGTAAGATACGGCAGGGAAATGTAAGCTGGTTCGATGGCATACATTTCCCTGTTTTGCTATACTGGGTACAGTCCTTGAGAAAATGAAATAAAATTGCTGCGGTAAAAACGATGCTTACAGCAGCAGAAAAAATATGAGAGTAGAAAAGACGGGGAGGAACCTGAT TGGGAACGGTTGTAAAAATTGGTTAAAGCGGCTATTTCAGGTAAGAATGTATAATGGAATAAAAATGCAATCTTACAGGAATGTAAGATACGGCAGGGAAATGTAAGCTGGTTCGATGGCATACATTTCCCTGTTTTGCTATACTGGGTACAGTCCTTGAGAAAATGAAATAAAATTGCTGCGGTAAAAACGATGCTTACAGCAGCAGAAAAAATATGAGAGTAGAAAAGACGGGGAGGAACCTGATATGGCACTTTTAGAGGTAAATAATT ATCAGGTTCCTCCCCGTCTTTTCTACTCTCATATTTTTTCTGCTGCTGTAAGCATCGTTTTTACCGCAGCAATTTTATTTCATTTTCTCAAGGACTGTACCCAGTATAGCAAAACAGGGAAATGTATGCCATCGAACCAGCTTACATTTCCCTGCCGTATCTTACATTCCTGTAAGAT 178 TTerm_0575 NZ_LR027880.1 4184203 4184226 24 4184233 4184256 24 6 95 0 43 64 35 65 34 0 4184229 ATCAGAAAAGGATCGTGAAAATGA TCATCTTCACGATCCTTTTCTGAT True ATGATTACA ATCAAACTG True True + ATCAGAAAAGGATCGTGAAAATGA TTTTGC TCATCTTCACGATCCTTTTCTGAT ATCAAACTG 102 RIL182_RS19695 intergenic 4184164 4184297 + down TAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGATATCAAACTGATCTATCGTTCATAAAATCATCGTCCGTCAGT TTTTCTTGCAAAAGACCTTGCATAGTAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGATATCAAACTGATCTATCGTTCATAAAATCATCGTCCGTCAGTTATAATGCGGCAAGCATCTGCAGCG TAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGAT 92 TTerm_0576 NZ_LR027880.1 4184203 4184226 24 4184233 4184256 24 6 95 0 43 64 35 65 34 0 4184229 ATCAGAAAAGGATCGTGAAAATGA TCATCTTCACGATCCTTTTCTGAT True ATGATTACA ATCAAACTG True True + ATCAGAAAAGGATCGTGAAAATGA TTTTGC TCATCTTCACGATCCTTTTCTGAT ATCAAACTG 102 RIL182_RS19700 intergenic 4184164 4184297 - down ACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGATGTAATCATTTTTACCTGTAAGATGGTATTCCAAACTTA CGCTGCAGATGCTTGCCGCATTATAACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGATGTAATCATTTTTACCTGTAAGATGGTATTCCAAACTTACTATGCAAGGTCTTTTGCAAGAAAA TAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGAT 92 TTerm_0577 NZ_LR027880.1 4198814 4198826 13 4198835 4198847 13 8 92 0 21 61 38 58 41 0 4198830 AAAAGAGGGTTTG CATACCCTCTTTT True CAGGCAAAA CTGTCATTG True True + AAAAGAGGGTTTG CAGTCTGC CATACCCTCTTTT CTGTCATTG 66 RIL182_RS19745 intergenic 4198697 4198919 - down AAAAAACATCATGGAAAACATATCGAGGAATCCATAGAAGAGAGTAAAAAAGAAGAATAAGATCAATGACAGAAAAGAGGGTATGGCAGACTGCAAACCCTCTTTTTTTGCCTGTATCATGGCTTTTTTTTCTAAGATTAAATTTTGACATCTATATGTGCGTATGATAAACTAAGAACAAAAGAAGCAGCAAAAGAATAGCGCGTTCTGAGGTGGCATAAT ATAAAAATCCGTCAAAAAAGAGTTGAAAAAACATCATGGAAAACATATCGAGGAATCCATAGAAGAGAGTAAAAAAGAAGAATAAGATCAATGACAGAAAAGAGGGTATGGCAGACTGCAAACCCTCTTTTTTTGCCTGTATCATGGCTTTTTTTTCTAAGATTAAATTTTGACATCTATATGTGCGTATGATAAACTAAGAACAAAAGAAGCAGCAAAAGAATAGCGCGTTCTGAGGTGGCATAATTTGGATAAATATGAATATAAATTAA ATTATGCCACCTCAGAACGCGCTATTCTTTTGCTGCTTCTTTTGTTCTTAGTTTATCATACGCACATATAGATGTCAAAATTTAATCTTAGAAAAAAAAGCCATGATACAGGCAAAAAAAGAGGGTTTGCAGTCTGCCATACCCTCTTTT 150 TTerm_0578 NZ_LR027880.1 4220395 4220401 7 4220406 4220412 7 4 100 0 14 85 14 85 14 0 4220403 AAAAACA TGTTTTT True GTTTACTGA TCCTTTTTT False True + AAAAACA AACC TGTTTTT TCCTTTTTT 36 RIL182_RS19825 intergenic 4220229 4220420 - down AAAAAGGAAAAAACAGGTTTGTTTTTCAGTAAACGGGAAAATATTTATCAGCAGAATTAATGATTTTTATTAACGTACCTGATAAATATTCTCTCTTTTGTATAAACTGGGTAAAATTTTAGTAAAACTTTACTAAAGCTATTGAAATCTGCAAAATCGTGAAATATAATGCAGAAGAAAGGCGTGATTAT GAACAATCAAAAATATGATCATATAAAAAAGGAAAAAACAGGTTTGTTTTTCAGTAAACGGGAAAATATTTATCAGCAGAATTAATGATTTTTATTAACGTACCTGATAAATATTCTCTCTTTTGTATAAACTGGGTAAAATTTTAGTAAAACTTTACTAAAGCTATTGAAATCTGCAAAATCGTGAAATATAATGCAGAAGAAAGGCGTGATTATATGGCAACAATCAAAGAGATTGCCA ATAATCACGCCTTTCTTCTGCATTATATTTCACGATTTTGCAGATTTCAATAGCTTTAGTAAAGTTTTACTAAAATTTTACCCAGTTTATACAAAAGAGAGAATATTTATCAGGTACGTTAATAAAAATCATTAATTCTGCTGATAAATATTTTCCCGTTTACTGAAAAACAAACCTGTTTTT 183 TTerm_0579 NZ_LR027880.1 4226119 4226126 8 4226134 4226141 8 7 87 0 11 68 31 71 28 0 4226129 ACTGTAAA TTTACCGT True GTCCGGTGA TGTTTTGAT False True + ACTGTAAA AATCCTG TTTACCGT TGTTTTGAT 38 RIL182_RS19855 intergenic 4226092 4226431 - down AAAGTGCATCAGGGATCTGCAGCGTATGATTCGCATGCAGATCCTTTTTTGCAGGATAACGCTATAAGGTATCGGCATGATTGTCAGTTGTGCGGTGAAATGGGCATATACAGCAGAAACGCTGCTGTTATGCCTATTTTTTTGTGTGATTTTGGGCATAATCACAAGGTTTTTCCTGTATATGGAAAATGAGGAGCCGGATAAAAAGAATACATGGTATAATGTTGGTATGATATGGGAATTAATTATGTAAGACAGAAAGGCGCAAAATGCGGATTCTGATCAAAACAACGGTAAACAGGATTTTTACAGTCACCGGACATAAAACAGGAGGCACAC GGAATACGGATTTGTCAGTGAAATAAAAGTGCATCAGGGATCTGCAGCGTATGATTCGCATGCAGATCCTTTTTTGCAGGATAACGCTATAAGGTATCGGCATGATTGTCAGTTGTGCGGTGAAATGGGCATATACAGCAGAAACGCTGCTGTTATGCCTATTTTTTTGTGTGATTTTGGGCATAATCACAAGGTTTTTCCTGTATATGGAAAATGAGGAGCCGGATAAAAAGAATACATGGTATAATGTTGGTATGATATGGGAATTAATTATGTAAGACAGAAAGGCGCAAAATGCGGATTCTGATCAAAACAACGGTAAACAGGATTTTTACAGTCACCGGACATAAAACAGGAGGCACACATGAGCAATTACTTACTGATCAAAC GTGTGCCTCCTGTTTTATGTCCGGTGACTGTAAAAATCCTGTTTACCGT 49 TTerm_0580 NZ_LR027880.1 4233412 4233429 18 4233434 4233451 18 4 88 0 26 61 38 56 43 0 4233431 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True + AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTCTTATGC 68 RIL182_RS19885 intergenic 4233194 4233455 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAATGAAAAGAGTGGTATTCAGAAAATGATTCTATGAAAATAAAATTGAATTGCGATAGATGTAGTATACATGGGGAAATCATAAATTGCAAGAAGAATCTGCCGTTGTATGGATTCACATAGACAAATCAAAACGAATTGCTTATACTTGATTTATGACAACATCACCCAAAAGAGGAGAAATCA GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAATGAAAAGAGTGGTATTCAGAAAATGATTCTATGAAAATAAAATTGAATTGCGATAGATGTAGTATACATGGGGAAATCATAAATTGCAAGAAGAATCTGCCGTTGTATGGATTCACATAGACAAATCAAAACGAATTGCTTATACTTGATTTATGACAACATCACCCAAAAGAGGAGAAATCAATGATTTTATATTTTGTACGTCACG TGATTTCTCCTCTTTTGGGTGATGTTGTCATAAATCAAGTATAAGCAATTCGTTTTGATTTGTCTATGTGAATCCATACAACGGCAGATTCTTCTTGCAATTTATGATTTCCCCATGTATACTACATCTATCGCAATTCAATTTTATTTTCATAGAATCATTTTCTGAATACCACTCTTTTCATTGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTT 257 TTerm_0581 NZ_LR027880.1 4236867 4236887 21 4236896 4236916 21 8 95 0 37 73 26 75 25 0 4236891 AAAAACACCTGTAATTACATG CATATAATTACAGGTGTTTTT True CTATTTTCA ATTACTGAA True True + AAAAACACCTGTAATTACATG CCCAACAA CATATAATTACAGGTGTTTTT ATTACTGAA 82 RIL182_RS21845 intergenic 4236816 4236918 + down ACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTTAT TTACAATTCACTAAAAGAAAATTAAACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTTATTACTGAAATATTTCTTTTTTACAGA ACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTT 100 TTerm_0582 NZ_LR027880.1 4236867 4236887 21 4236896 4236916 21 8 95 0 37 73 26 75 25 0 4236891 AAAAACACCTGTAATTACATG CATATAATTACAGGTGTTTTT True CTATTTTCA ATTACTGAA True True + AAAAACACCTGTAATTACATG CCCAACAA CATATAATTACAGGTGTTTTT ATTACTGAA 82 RIL182_RS19900 intergenic 4236816 4236918 - down ATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTTTGAAAATAGAATATGCGTGGAGTGTGTAGTCTGTTGTTTGAAATAATGAGT TCTGTAAAAAAGAAATATTTCAGTAATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTTTGAAAATAGAATATGCGTGGAGTGTGTAGTCTGTTGTTTGAAATAATGAGTTTAATTTTCTTTTAGTGAATTGTAA ACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTT 100 TTerm_0583 NZ_LR027880.1 4244216 4244223 8 4244231 4244238 8 7 87 0 11 56 43 57 42 0 4244226 AACCCTCT AGAGGATT True AAAATCCGA TTACTCCTA True True + AACCCTCT GGTGAGG AGAGGATT TTACTCCTA 46 RIL182_RS19940 intergenic 4244182 4244255 - down ATAATATTTAGGAGTAAAATCCTCTCCTCACCAGAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGATTTAT TTGGTCAGAACTACGAACAAGAATAATAATATTTAGGAGTAAAATCCTCTCCTCACCAGAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGATTTATATGAATATCACAGGACACGATTTAA ATAAATCCTCCTTGTTTTGCGAAGCAAAATCCGAACCCTCTGGTGAGGAGAGGATT 56 TTerm_0584 NZ_LR027880.1 4249956 4249969 14 4249977 4249990 14 7 85 0 18 46 53 50 50 0 4249972 AGAGCCGCATGTAC GTATATCCGGCTCT True TGGTCGAAA ATTTTGCTA False True + AGAGCCGCATGTAC CGTTTGT GTATATCCGGCTCT ATTTTGCTA 44 RIL182_RS19970 intergenic 4249937 4250137 + down TAAAAATAATTGGTCGAAAGAGCCGCATGTACCGTTTGTGTATATCCGGCTCTATTTTGCTATCACATTCCTTTGTGCTTATTTTTGTACACGGTTTTTTCGTGTTTTGACTTGTATTACCCTCTTTTTTGTATTAGAATAATCTAAAGCTACTGAAGCGGTAGCGAGTCTATGATTCTATTTTAAGGAGGGAATACAAA GCTGTATCATTTTTCTACATTCTGATAAAAATAATTGGTCGAAAGAGCCGCATGTACCGTTTGTGTATATCCGGCTCTATTTTGCTATCACATTCCTTTGTGCTTATTTTTGTACACGGTTTTTTCGTGTTTTGACTTGTATTACCCTCTTTTTTGTATTAGAATAATCTAAAGCTACTGAAGCGGTAGCGAGTCTATGATTCTATTTTAAGGAGGGAATACAAATGGCATTCGTAATTTCTGATTCTTG TAAAAATAATTGGTCGAAAGAGCCGCATGTACCGTTTGTGTATATCCGGCTCT 53 TTerm_0585 NZ_LR027880.1 4262095 4262106 12 4262112 4262123 12 5 100 0 24 50 50 50 50 0 4262108 TTGGGATAGCAG CTGCTATCCCAA True GTAACATTT TTTTCAATT False True + TTGGGATAGCAG AAAAA CTGCTATCCCAA TTTTCAATT 72 RIL182_RS20025 intergenic 4261946 4262142 - down ATTAAGTGAGAATTGAAAATTGGGATAGCAGTTTTTCTGCTATCCCAAAATGTTACACAGATTTGATAAAAGCAACCAGTGAGATGACTGTTTTTATGAGATTTGAGTATAAGGGTATCTGCATGAAGAGGTATGGATAAAAAGATGTTTATCCGTATAGACAATTAAAAAATATAAAAGGAAATGGTGGATAATT ATATTGATACTGCAAACGGAAAGTAATTAAGTGAGAATTGAAAATTGGGATAGCAGTTTTTCTGCTATCCCAAAATGTTACACAGATTTGATAAAAGCAACCAGTGAGATGACTGTTTTTATGAGATTTGAGTATAAGGGTATCTGCATGAAGAGGTATGGATAAAAAGATGTTTATCCGTATAGACAATTAAAAAATATAAAAGGAAATGGTGGATAATTATGGGAGAAATTTTTGGATTAGATG AATTATCCACCATTTCCTTTTATATTTTTTAATTGTCTATACGGATAAACATCTTTTTATCCATACCTCTTCATGCAGATACCCTTATACTCAAATCTCATAAAAACAGTCATCTCACTGGTTGCTTTTATCAAATCTGTGTAACATTTTGGGATAGCAGAAAAACTGCTATCCCAA 177 TTerm_0586 NZ_LR027880.1 4283937 4283954 18 4283960 4283977 18 5 83 0 21 47 52 46 53 0 4283956 AAAAGCCAGGGTTGCACA TGTGTAACCCCGGCTCTT True AACATTTTA TTTATGTCT True True + AAAAGCCAGGGTTGCACA CTTTT TGTGTAACCCCGGCTCTT TTTATGTCT 58 RIL182_RS20095 intergenic 4283778 4283988 + down GTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTTTTTATGTCTCC TGCAAAGGTGGTTGATTTACCTTGAGTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTTTTTATGTCTCCTAAATCTGTTCGTAAAACATCCACC GTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTT 199 TTerm_0587 NZ_LR027880.1 4283937 4283954 18 4283960 4283977 18 5 83 0 21 47 52 46 53 0 4283956 AAAAGCCAGGGTTGCACA TGTGTAACCCCGGCTCTT True AACATTTTA TTTATGTCT True True + AAAAGCCAGGGTTGCACA CTTTT TGTGTAACCCCGGCTCTT TTTATGTCT 58 RIL182_RS20100 intergenic 4283778 4283988 - down GGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTTTAAAATGTTCGATTTTTTGTAGTATAAAATTTTCCGGAATGTCAAGCCGATTTGAAAGACAGGAAATACAAAGATAAGAAGTACTTCCGCGATTCACAAATTTTTTATAAGCTCCGATTTCGTTATGCGTTAATTCTTTTTTGCAATTCATACAGCAAC GGTGGATGTTTTACGAACAGATTTAGGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTTTAAAATGTTCGATTTTTTGTAGTATAAAATTTTCCGGAATGTCAAGCCGATTTGAAAGACAGGAAATACAAAGATAAGAAGTACTTCCGCGATTCACAAATTTTTTATAAGCTCCGATTTCGTTATGCGTTAATTCTTTTTTGCAATTCATACAGCAACTCAAGGTAAATCAACCACCTTTGCA GTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTT 199 TTerm_0588 NZ_LR027880.1 4342009 4342016 8 4342022 4342029 8 5 100 0 16 87 12 87 12 0 4342018 AATATATC GATATATT True AATTTAATA TTATCATAA False True + AATATATC ACGAA GATATATT TTATCATAA 40 RIL182_RS20280 intergenic 4341948 4342067 - down AGTAAAAAGTTCTTGCAAACTATTGATTTTTATGATAAAATATATCTTCGTGATATATTATTAAATTCCTTGCTCACTCATATAAGAGCGGGCCAGAGACCAAAAGGAGGAAAATTCGC AAAAGGAAGCTGAGCAAGGAAGCTGAGTAAAAAGTTCTTGCAAACTATTGATTTTTATGATAAAATATATCTTCGTGATATATTATTAAATTCCTTGCTCACTCATATAAGAGCGGGCCAGAGACCAAAAGGAGGAAAATTCGCATGAATAAGTATGAATTAGCACTTG GCGAATTTTCCTCCTTTTGGTCTCTGGCCCGCTCTTATATGAGTGAGCAAGGAATTTAATAATATATCACGAAGATATATT 81 TTerm_0589 NZ_LR027880.1 4365004 4365018 15 4365024 4365038 15 5 93 0 25 50 50 50 50 0 4365020 TGCTGTTGTTCACAC GTGTGAACAGCAGCA True CTGTTTCCT ATTTTCTTT False True + TGCTGTTGTTCACAC CTATT GTGTGAACAGCAGCA ATTTTCTTT 74 RIL182_RS20395 intergenic 4364833 4365125 - down AAAGGTGCAGGGATTGTTGTATAGACAAAAACTGGAATAGGAACAAAAGCACAAAGTCAGGCATGGCATCAGATTGTGAAAGAAAATTGCTGCTGTTCACACAATAGGTGTGAACAACAGCAGGAAACAGATGGCGGGAAGTACAAAAGATAAATGGAAGTTGCATGTTTACACCAAAAATAAAATCCGCTAAAATATAGAAAATTACAGAATGCAGATACAATTCACAACAATAGAATGTTCGCAAAGCGCAGGCTATTATTTTTTATATCGGAGAAAGGCGGTAGTGAGG CGGTGTATGTGAAAGAGAAGGAATAAAAGGTGCAGGGATTGTTGTATAGACAAAAACTGGAATAGGAACAAAAGCACAAAGTCAGGCATGGCATCAGATTGTGAAAGAAAATTGCTGCTGTTCACACAATAGGTGTGAACAACAGCAGGAAACAGATGGCGGGAAGTACAAAAGATAAATGGAAGTTGCATGTTTACACCAAAAATAAAATCCGCTAAAATATAGAAAATTACAGAATGCAGATACAATTCACAACAATAGAATGTTCGCAAAGCGCAGGCTATTATTTTTTATATCGGAGAAAGGCGGTAGTGAGGATGGAGGATATGACAGAAAAAGAAC CCTCACTACCGCCTTTCTCCGATATAAAAAATAATAGCCTGCGCTTTGCGAACATTCTATTGTTGTGAATTGTATCTGCATTCTGTAATTTTCTATATTTTAGCGGATTTTATTTTTGGTGTAAACATGCAACTTCCATTTATCTTTTGTACTTCCCGCCATCTGTTTCCTGCTGTTGTTCACACCTATTGTGTGAACAGCAGCA 205 TTerm_0590 NZ_LR027880.1 4380193 4380210 18 4380217 4380234 18 6 83 0 21 61 38 66 33 0 4380213 AAAAAAATCGCCTGCAAC GTTCCAGACGATTTTCTT True CAGGAATTA TTAAATTTT True True + AAAAAAATCGCCTGCAAC TTTTAT GTTCCAGACGATTTTCTT TTAAATTTT 66 RIL182_RS20475 intergenic 4380018 4380246 - down ATAAAAATTTAAAAGAAAATCGTCTGGAACATAAAAGTTGCAGGCGATTTTTTTAATTCCTGACAATAGAATATCCGTGGAGAGTGTGTTCTATTGTACATAGGAAAATTACATATGATTGACAGAGAATATAGTTTTGATTATATTAAATTTAGTACCACAAGTGAAAGTTTTGAGCGGGAAATATAGACACAACACTAGTAACTATTGGGAATTGGGGTTCGCATT ATAAAAGACGTAGAAGACGCAGATAATAAAAATTTAAAAGAAAATCGTCTGGAACATAAAAGTTGCAGGCGATTTTTTTAATTCCTGACAATAGAATATCCGTGGAGAGTGTGTTCTATTGTACATAGGAAAATTACATATGATTGACAGAGAATATAGTTTTGATTATATTAAATTTAGTACCACAAGTGAAAGTTTTGAGCGGGAAATATAGACACAACACTAGTAACTATTGGGAATTGGGGTTCGCATTATGCGCAGGGAACGCAGAAATGGGG AATGCGAACCCCAATTCCCAATAGTTACTAGTGTTGTGTCTATATTTCCCGCTCAAAACTTTCACTTGTGGTACTAAATTTAATATAATCAAAACTATATTCTCTGTCAATCATATGTAATTTTCCTATGTACAATAGAACACACTCTCCACGGATATTCTATTGTCAGGAATTAAAAAAATCGCCTGCAACTTTTATGTTCCAGACGATTTTCTT 216 TTerm_0591 NZ_LR027880.1 4389317 4389330 14 4389335 4389348 14 4 78 0 13 57 42 54 45 0 4389332 AAGCCTGTTTCATC GATGAATCCAGCTT True TTCTGCAGA TTTCCACAG False True + AAGCCTGTTTCATC CTTT GATGAATCCAGCTT TTTCCACAG 42 RIL182_RS20520 intergenic 4389174 4389400 - down AAATCCGAACATAGTAAATATGTGTAGAAAAATAAAAGACCTTCTGTGGAAAAAGCTGGATTCATCAAAGGATGAAACAGGCTTCTGCAGAAGGTCTTTTTAATACCATAAGCAATGCTGATCATATATCACGGGCTGGACAAATGCGTATTGTGAAGAAAAAATAATTGACATAGCAGAAGTATTACCCTATAATCGTTCTAAAAAGAACAATAAGGAGGCGCAG GCAAACAGGTCGGGTTCATCAAATAAAATCCGAACATAGTAAATATGTGTAGAAAAATAAAAGACCTTCTGTGGAAAAAGCTGGATTCATCAAAGGATGAAACAGGCTTCTGCAGAAGGTCTTTTTAATACCATAAGCAATGCTGATCATATATCACGGGCTGGACAAATGCGTATTGTGAAGAAAAAATAATTGACATAGCAGAAGTATTACCCTATAATCGTTCTAAAAAGAACAATAAGGAGGCGCAGATGTATTTCTGGGACAAGCATAAGA CTGCGCCTCCTTATTGTTCTTTTTAGAACGATTATAGGGTAATACTTCTGCTATGTCAATTATTTTTTCTTCACAATACGCATTTGTCCAGCCCGTGATATATGATCAGCATTGCTTATGGTATTAAAAAGACCTTCTGCAGAAGCCTGTTTCATCCTTTGATGAATCCAGCTT 174 TTerm_0592 NZ_LR027880.1 4391005 4391014 10 4391021 4391030 10 6 90 0 15 90 10 88 11 0 4391017 AAATTTTATC GATAAAAATT True TAAAAGTGA TTATCCTAC True True + AAATTTTATC CTACGT GATAAAAATT TTATCCTAC 38 RIL182_RS20530 intergenic 4390962 4391057 - down GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAAT CAATAGCATTTCCATTTTATCCGTAGGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAATATGTCAAATGAAGTACAAGTAAAGA ATTTTTTTCCTCCAGATTTTTTAATAATATAATTTAAAAGTGAAATTTTATCCTACGTGATAAAAATT 68 TTerm_0593 NZ_LR027880.1 4391007 4391035 29 4391042 4391069 28 6 82 3 26 78 21 79 20 0 4391038 ATTTTATCCTACGTGATAAAAATTTTATC GATAAAAATTTTATCCTACGGATAAAAT True AAAGTGAAA GGAAATGCT True True + ATTTTATCCTACGTGATAAAAATTTTATC CTACGT GATAAAAATTTTATCCTACGGATAAAAT GGAAATGCT 60 RIL182_RS20530 intergenic 4390962 4391057 - down GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAAT CAATAGCATTTCCATTTTATCCGTAGGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAATATGTCAAATGAAGTACAAGTAAAGA ATTTTTTTCCTCCAGATTTTTTAATAATATAATTTAAAAGTGAAATTTTATCCTACGTGATAAAAATTTTATCCTACGTGATAAAAATTTTATCCTACGGATAAAAT 107 TTerm_0594 NZ_LR027880.1 4405371 4405381 11 4405386 4405396 11 4 81 0 12 77 22 77 22 0 4405383 TGACAAAATAA TTATTGTGACA True CTGTTCCGT ATTTTGTCA False True + TGACAAAATAA ATTA TTATTGTGACA ATTTTGTCA 32 RIL182_RS20590 intergenic 4405318 4405418 - down AATTGTTTCTAAGTGACAAAATTGTCACAATAATAATTTATTTTGTCACGGAACAGTCATTTTGCATTGCTAGGATGGTATTTGAAAAAGGAGAAATGCA TTTTTATTTTAAAATTTTTTAAGTGAATTGTTTCTAAGTGACAAAATTGTCACAATAATAATTTATTTTGTCACGGAACAGTCATTTTGCATTGCTAGGATGGTATTTGAAAAAGGAGAAATGCAATGGCTGTTTTAGAAGTGAAGGAAT TGCATTTCTCCTTTTTCAAATACCATCCTAGCAATGCAAAATGACTGTTCCGTGACAAAATAAATTATTATTGTGACA 78 TTerm_0595 NZ_LR027880.1 4406969 4406977 9 4406987 4406995 9 9 88 0 13 88 11 87 12 0 4406981 GAAATATTA TAATAATTC True TCTGCCATG TTTTGGTAT False True + GAAATATTA GCAGCGTAA TAATAATTC TTTTGGTAT 26 RIL182_RS20600 intergenic 4406894 4407054 - down GATGATAACAACAGCAAGGCAAGTTCTGTTATGGAAAATCTATGGAAAGCATACCAAAAGAATTATTATTACGCTGCTAATATTTCATGGCAGATGGTTATGCAATCTATTCGATTTTTATATGAAATATCTTATAACGATAACGAAAGGACTATAATTC GACCATATTTGGAGGTATTACTTTAGATGATAACAACAGCAAGGCAAGTTCTGTTATGGAAAATCTATGGAAAGCATACCAAAAGAATTATTATTACGCTGCTAATATTTCATGGCAGATGGTTATGCAATCTATTCGATTTTTATATGAAATATCTTATAACGATAACGAAAGGACTATAATTCATGAGTAGAATACTTTTGGTGGAAG GAATTATAGTCCTTTCGTTATCGTTATAAGATATTTCATATAAAAATCGAATAGATTGCATAACCATCTGCCATGAAATATTAGCAGCGTAATAATAATTC 101 TTerm_0596 NZ_LR027880.1 4448604 4448628 25 4448634 4448659 26 5 96 3 40 56 43 56 44 0 4448630 AGAAAAAGAGCTTCCACGCAGTTCT AGAACATGCGTGGAAGCTCTTTTTCT True CTCCTTACA ATTTATCTT True True + AGAAAAAGAGCTTCCACGCAGTTCT ACTAC AGAACATGCGTGGAAGCTCTTTTTCT ATTTATCTT 96 RIL182_RS20780 intergenic 4448565 4448662 + down ACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCTATT TGAAGTTGCTTACGGATGCCTGTAAACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCTATTTATCTTCTGTACTTATTGCTGAAAT ACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCT 94 TTerm_0597 NZ_LR027880.1 4448604 4448628 25 4448634 4448659 26 5 96 3 40 56 43 56 44 0 4448630 AGAAAAAGAGCTTCCACGCAGTTCT AGAACATGCGTGGAAGCTCTTTTTCT True CTCCTTACA ATTTATCTT True True + AGAAAAAGAGCTTCCACGCAGTTCT ACTAC AGAACATGCGTGGAAGCTCTTTTTCT ATTTATCTT 96 RIL182_RS20785 intergenic 4448565 4448662 - down AATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTCTGTAAGGAGGGAACTATAAAAAAGAATTATTGGTAAAGT ATTTCAGCAATAAGTACAGAAGATAAATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTCTGTAAGGAGGGAACTATAAAAAAGAATTATTGGTAAAGTTTACAGGCATCCGTAAGCAACTTCA ACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCT 94 TTerm_0598 NZ_LR027880.1 4449135 4449143 9 4449148 4449156 9 4 88 0 13 61 38 62 37 0 4449145 AAGTCAAGG CCTTGATTT True GTTAATCCA TTCTAACTA False True + AAGTCAAGG AAAG CCTTGATTT TTCTAACTA 50 RIL182_RS20790 intergenic 4448883 4449258 - down AACCCTCAGGGTGACAATGTCAGCGGTTTGACAGCGAAAACCATTTTTCTCAGACGATTTTAAGTTTTCTTATTTTGACATGGAATTACAGAATAGTTAGAAAAATCAAGGCTTTCCTTGACTTGGATTAACTTAGAATTATATATGTTTCCAAGGTGGATTCGAGCTCCTAAGCACTAGTTGAGGGTTCGATTCCCGCAGGGAACATCGATTTTTTTGCAGCAATGATCGTAAAAATTCATTGTTGCATTTTTTATTTTATGGGGCTTGCGAGCACCGAAAAGACAAAATGGGCACCGAGAACTAAATCTATTCAAGCACCCAATGGAGATAACTAAAGTGTAGGATAAGATTTAGGTTATCAATGAATGTCCA TGAATCCGCTGGAACGGAATGGCTGAACCCTCAGGGTGACAATGTCAGCGGTTTGACAGCGAAAACCATTTTTCTCAGACGATTTTAAGTTTTCTTATTTTGACATGGAATTACAGAATAGTTAGAAAAATCAAGGCTTTCCTTGACTTGGATTAACTTAGAATTATATATGTTTCCAAGGTGGATTCGAGCTCCTAAGCACTAGTTGAGGGTTCGATTCCCGCAGGGAACATCGATTTTTTTGCAGCAATGATCGTAAAAATTCATTGTTGCATTTTTTATTTTATGGGGCTTGCGAGCACCGAAAAGACAAAATGGGCACCGAGAACTAAATCTATTCAAGCACCCAATGGAGATAACTAAAGTGTAGGATAAGATTTAGGTTATCAATGAATGTCCAATGCTTGGACTAGGAACTTTTATGT TGGACATTCATTGATAACCTAAATCTTATCCTACACTTTAGTTATCTCCATTGGGTGCTTGAATAGATTTAGTTCTCGGTGCCCATTTTGTCTTTTCGGTGCTCGCAAGCCCCATAAAATAAAAAATGCAACAATGAATTTTTACGATCATTGCTGCAAAAAAATCGATGTTCCCTGCGGGAATCGAACCCTCAACTAGTGCTTAGGAGCTCGAATCCACCTTGGAAACATATATAATTCTAAGTTAATCCAAGTCAAGGAAAGCCTTGATTT 273 TTerm_0599 NZ_LR027880.1 4464603 4464615 13 4464624 4464636 13 8 92 0 21 57 42 58 41 0 4464619 AAAACGCTTTTGG CCAGAAGCGTTTT True CTGTAGACA TCTTGTTTT True True + AAAACGCTTTTGG TCAGCACT CCAGAAGCGTTTT TCTTGTTTT 66 RIL182_RS20875 intergenic 4464544 4464717 - down ATGATAGCCAGGAAGGGAAAAAGGGGAGCCCAAAAGTGTTTATTATTGATCAAGTACACACTTTTTGAACCGAAAACAAGAAAAACGCTTCTGGAGTGCTGACCAAAAGCGTTTTGTCTACAGTCTGAAAGGAAGCCCCCAAAAAGGGGGCTTCCTTTCTTTAATATCGGCAA GCATGAATCTGAAAAACTGGCAAAGATGATAGCCAGGAAGGGAAAAAGGGGAGCCCAAAAGTGTTTATTATTGATCAAGTACACACTTTTTGAACCGAAAACAAGAAAAACGCTTCTGGAGTGCTGACCAAAAGCGTTTTGTCTACAGTCTGAAAGGAAGCCCCCAAAAAGGGGGCTTCCTTTCTTTAATATCGGCAAATGTGTTTATTTTTGATTACTCTTG TTGCCGATATTAAAGAAAGGAAGCCCCCTTTTTGGGGGCTTCCTTTCAGACTGTAGACAAAACGCTTTTGGTCAGCACTCCAGAAGCGTTTT 92 TTerm_0600 NZ_LR027880.1 4465520 4465529 10 4465537 4465546 10 7 80 0 10 90 10 100 0 0 4465532 AAATTCTTAT ATAAACATTT True ATAGTCAGA TGTTTATCT False True + AAATTCTTAT ACAGCGG ATAAACATTT TGTTTATCT 28 RIL182_RS20880 intergenic 4465459 4465656 - down AACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAAATGACATTGCCCAGAGATCCCCCCCTCCTGTGGT TAAGCTTTCTATATAGAGCAGCTTAAACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAAATGACATTGCCCAGAGATCCCCCCCTCCTGTGGTGGCAGCTCTGATGGAAAAGAAGAAA ACCACAGGAGGGGGGGATCTCTGGGCAATGTCATTTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATTT 87 TTerm_0601 NZ_LR027880.1 4467013 4467030 18 4467035 4467052 18 4 100 0 36 55 44 55 44 0 4467032 GGTCGCTCTAACTATCTT AAGATAGTTAGAGCGACC True ATTACAAGG GCACATTTT False True + GGTCGCTCTAACTATCTT AAAA AAGATAGTTAGAGCGACC GCACATTTT 80 RIL182_RS20885 intergenic 4466969 4467320 - down AAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACG TGATTAACCGGCTATTTGGAAAATGAAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACGATGAATTATTCTACAGAGGTAAAAC CGTGTAATTCTCCTTGCAATCAAGATATTTTCTTAATTACAAGGGTCGCTCTAACTATCTTAAAAAAGATAGTTAGAGCGACC 83 TTerm_0602 NZ_LR027880.1 4467298 4467304 7 4467314 4467320 7 9 100 0 14 85 14 85 14 0 4467308 AAAAGTT AACTTTT True TTTCCCTAA CATTTTCCA False True + AAAAGTT AATACCTAG AACTTTT CATTTTCCA 36 RIL182_RS20885 intergenic 4466969 4467320 - down AAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACG TGATTAACCGGCTATTTGGAAAATGAAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACGATGAATTATTCTACAGAGGTAAAAC CGTGTAATTCTCCTTGCAATCAAGATATTTTCTTAATTACAAGGGTCGCTCTAACTATCTTAAAAAAGATAGTTAGAGCGACCGCACATTTTGATTATCATGTCAAGTGCTTAACATAATTTTACAAAAAAAGAACAGGGTACATATTTCTATATACACTGTTCTTTGTATAATCCTTATCTAAATGACATTGCCCTTTTTGGGGGCTTCCTTTCTTGTTTACTCCACCGATCAACGGCTCAATATTAAAAAATCTCGGAAACCAAGAACGCTACAACATAGCAGATCGTTTGGTGTATCATGTAAATAATAAGCGAATGTTTCCCTAAAAAGTTAATACCTAGAACTTTT 351 TTerm_0603 NZ_LR027880.1 4473992 4473998 7 4474008 4474014 7 9 100 0 14 71 28 71 28 0 4474002 GCATTTT AAAATGC True AGCAATTTG TCATTTTTT False True + GCATTTT CTGTTAGCA AAAATGC TCATTTTTT 36 RIL182_RS21030 intergenic 4473773 4474095 - down GCTCTATTTTAAGCGGTAATGAGAGAAAAATCATTGCCGTTTTTTTTGTTGTTTTTCTGCTAACAGCAAATCAAAAAATGAGCATTTTTGCTAACAGAAAATGCAAATTGCTAACAGTAAAATTATTGTGGATCTGCTAACAGGAATGAAAAGCTATAATGCAACTGGTGTAAAAGGTTGTAAATTCTTGTAACTAACAAAAGGGTAATGATTACAAATATTTCTGCTTGGAAAATATCAAGCCTGAATGAGTATTCTGTTCAGATTAGATTAGGTTCTAATCTGGGCGGATTTTTTTATTTCAGGAAGAAGGAGGATGCCT TGTAGGTTCGATTCCTATAGGGAACGCTCTATTTTAAGCGGTAATGAGAGAAAAATCATTGCCGTTTTTTTTGTTGTTTTTCTGCTAACAGCAAATCAAAAAATGAGCATTTTTGCTAACAGAAAATGCAAATTGCTAACAGTAAAATTATTGTGGATCTGCTAACAGGAATGAAAAGCTATAATGCAACTGGTGTAAAAGGTTGTAAATTCTTGTAACTAACAAAAGGGTAATGATTACAAATATTTCTGCTTGGAAAATATCAAGCCTGAATGAGTATTCTGTTCAGATTAGATTAGGTTCTAATCTGGGCGGATTTTTTTATTTCAGGAAGAAGGAGGATGCCTATGGCAGAAAAAGTGGATCAGATGA AGGCATCCTCCTTCTTCCTGAAATAAAAAAATCCGCCCAGATTAGAACCTAATCTAATCTGAACAGAATACTCATTCAGGCTTGATATTTTCCAAGCAGAAATATTTGTAATCATTACCCTTTTGTTAGTTACAAGAATTTACAACCTTTTACACCAGTTGCATTATAGCTTTTCATTCCTGTTAGCAGATCCACAATAATTTTACTGTTAGCAATTTGCATTTTCTGTTAGCAAAAATGC 241 TTerm_0604 NZ_LR027880.1 10548 10553 6 10558 10563 6 4 100 0 12 83 16 83 16 0 10555 AACAAA TTTGTT True AATGGAAAA GTATGATGA True False - AACAAA GTTT TTTGTT TTTTCCATT 32 RIL182_RS00035 intergenic 10392 10624 + down AAAGCGTAAAAATCTGAAGTTGCAAAGAGCGTGGGTTATGGAACAATTTTAAGTGAACAAGATTACGAATTGTGGAAAATGAGGGAGCAGATTGAAAAATTTGTGGAAAACCATAAGGTAAAAACTGTTATGTGAGACTTTAGAAAAAATGGAAAAACAAAAAACTTTGTTGTATGATGAAATGAAGCAAAACAATTAAAATGGGGTAATGTAGAAAGGTGGTACAAGCATA ATTTGGAATATTAAAGGAACAATGAAAAGCGTAAAAATCTGAAGTTGCAAAGAGCGTGGGTTATGGAACAATTTTAAGTGAACAAGATTACGAATTGTGGAAAATGAGGGAGCAGATTGAAAAATTTGTGGAAAACCATAAGGTAAAAACTGTTATGTGAGACTTTAGAAAAAATGGAAAAACAAAAAACTTTGTTGTATGATGAAATGAAGCAAAACAATTAAAATGGGGTAATGTAGAAAGGTGGTACAAGCATATGAACTTGACAGCAATTCAAAGCAA TATGCTTGTACCACCTTTCTACATTACCCCATTTTAATTGTTTTGCTTCATTTCATCATACAACAAAGTTTTTTGT 76 TTerm_0605 NZ_LR027880.1 12971 12984 14 12989 13002 14 4 100 0 28 64 35 64 35 0 12986 AAAAAAACAGGGTG CACCCTGTTTTTTT True GTCAGAACA ACCATCCAC True True - AAAAAAACAGGGTG CTGC CACCCTGTTTTTTT TGTTCTGAC 88 RIL182_RS00045 intergenic 12962 13098 + down GTCAGAACAAAAAAACAGGGTGGCAGCACCCTGTTTTTTTACCATCCACCGCCTAAAACCGACCACCTGCCGCAAATCAGTAGAAACCGTTCCAGACATTGCCTATAATGACATCAGAAAGGAGGAAGTGAGAAAA AAACGTTGATGAGTTATCAAAATAAGTCAGAACAAAAAAACAGGGTGGCAGCACCCTGTTTTTTTACCATCCACCGCCTAAAACCGACCACCTGCCGCAAATCAGTAGAAACCGTTCCAGACATTGCCTATAATGACATCAGAAAGGAGGAAGTGAGAAAATGCAAATAGAAATAAAACTCGACGA TTTTCTCACTTCCTCCTTTCTGATGTCATTATAGGCAATGTCTGGAACGGTTTCTACTGATTTGCGGCAGGTGGTCGGTTTTAGGCGGTGGATGGTAAAAAAACAGGGTGCTGCCACCCTGTTTTTT 127 TTerm_0606 NZ_LR027880.1 17246 17255 10 17265 17274 10 9 80 0 10 60 40 62 37 0 17259 GGAGTGAAAT ATTTTGCTCC True CAAAACGGG GCCAGACAA True False - GGAGCAAAAT GTGAACCGG ATTTCACTCC CCCGTTTTG 28 RIL182_RS00060 intergenic 17064 17320 + down TAAAAAATTCACAATTGAACCGTGCGCAGTGAAGTGTTATAGTATGTTCTGGATGATATTCCGTATACAGGAAATCATACCAGAACATATTTTTTATCAGAAAAAGAGAATAAAACCAGGAAAACCGCTTGTATCCGTCAGTCGACGGAATGAGACAGTCGCATGCTGCTTCACAAAACGGGGAGTGAAATCCGGTTCACATTTTGCTCCGCCAGACAAAGGGGGAAAATCCCCTGTCCGTCAGAGGAGGATTGCA GATATCCAAATTTGTGTTTGCCTAATAAAAAATTCACAATTGAACCGTGCGCAGTGAAGTGTTATAGTATGTTCTGGATGATATTCCGTATACAGGAAATCATACCAGAACATATTTTTTATCAGAAAAAGAGAATAAAACCAGGAAAACCGCTTGTATCCGTCAGTCGACGGAATGAGACAGTCGCATGCTGCTTCACAAAACGGGGAGTGAAATCCGGTTCACATTTTGCTCCGCCAGACAAAGGGGGAAAATCCCCTGTCCGTCAGAGGAGGATTGCATGCAGATCAGTTTTATTGGCGCCGG TGCAATCCTCCTCTGACGGACAGGGGATTTTCCCCCTTTGTCTGGCGGAGCAAAATGTGAACCGGATTTCACTC 74 TTerm_0607 NZ_LR027880.1 20463 20481 19 20486 20504 19 4 94 0 33 81 18 83 16 0 20483 AAAAAGCAATCAGTTATAA TTATAATTGATTGCTTTTT True TGAATCATA TAATCATGG True True - AAAAAGCAATCAATTATAA ATAA TTATAACTGATTGCTTTTT TATGATTCA 66 RIL182_RS00085 intergenic 20356 20578 + down AAAAATTTACTGTTTGAACAAATATGAAGGCTGTATTTAAAAAGGTTAAAGATACCTGAAATTCCAGAAACAGATGACCGGGAGCAAACGGTAACTGTTGAATCATAAAAAGCAATCAGTTATAATTATTTATAATTGATTGCTTTTTTAATCATGGAAACATATTTTTGTAGAACAGAATTTATTTTTGCAAAAAGATTTTTAATTACATGGAGGAAAATA CGGGGAGATATCGGCGATCCGTTAAAAAAATTTACTGTTTGAACAAATATGAAGGCTGTATTTAAAAAGGTTAAAGATACCTGAAATTCCAGAAACAGATGACCGGGAGCAAACGGTAACTGTTGAATCATAAAAAGCAATCAGTTATAATTATTTATAATTGATTGCTTTTTTAATCATGGAAACATATTTTTGTAGAACAGAATTTATTTTTGCAAAAAGATTTTTAATTACATGGAGGAAAATATGCCGCAGAACTGTTATGAACTCGT TATTTTCCTCCATGTAATTAAAAATCTTTTTGCAAAAATAAATTCTGTTCTACAAAAATATGTTTCCATGATTAAAAAAGCAATCAATTATAAATAATTATAACTGATTGCTTTT 115 TTerm_0608 NZ_LR027880.1 24351 24358 8 24367 24374 8 8 87 0 11 75 25 71 28 0 24362 CAAAAAAC GTTTTATG True ATAAAACCC CAGGCTGTC True False - CATAAAAC TTGGCTCC GTTTTTTG GGGTTTTAT 30 RIL182_RS00105 intergenic 24346 24537 + down AACCCAAAAAACGGAGCCAAGTTTTATGCAGGCTGTCAGTCATTGAGATGTAAAACATCCTTTGATTCCTGGATTTCATGAATAAAAAAATGAAATGTGAAAATAATAGTTGACAAATCAGTAAAGATTTAGTATAGTTATTCATGCGTTACGGCGCACGAACAATATAATATTGTTAAATAATGACTTTG ATATCCGGGAGAAAGATGGGAATAAAACCCAAAAAACGGAGCCAAGTTTTATGCAGGCTGTCAGTCATTGAGATGTAAAACATCCTTTGATTCCTGGATTTCATGAATAAAAAAATGAAATGTGAAAATAATAGTTGACAAATCAGTAAAGATTTAGTATAGTTATTCATGCGTTACGGCGCACGAACAATATAATATTGTTAAATAATGACTTTGGAGAAGTACTCAAGTGGCCGAAGAG CAAAGTCATTATTTAACAATATTATATTGTTCGTGCGCCGTAACGCATGAATAACTATACTAAATCTTTACTGATTTGTCAACTATTATTTTCACATTTCATTTTTTTATTCATGAAATCCAGGAATCAAAGGATGTTTTACATCTCAATGACTGACAGCCTGCATAAAACTTGGCTCCGTTTTTT 186 TTerm_0609 NZ_LR027880.1 24809 24816 8 24826 24833 8 9 87 0 11 81 18 85 14 0 24820 ATATCAAA TTTGAGAT True ATGATAAAA AACGGATCG True False - ATCTCAAA CGCGACAAC TTTGATAT TTTTATCAT 38 RIL182_RS00110 intergenic 24624 25112 + down CTTATTATTTACAATATGAGTTGTTCGAATTTTTTTTGAGAAAGTTGTTGACAAATCGCACGAACTATTATAACATGAATGAGTTGCGAAAATAAAGAATTATAAATTGTTTAAAAAAACATGAAAATTCAAAAAAACAACAAATTTAAAAAAGTTCTTGACAAACAAAACAACACATGATAAAATATCAAAGTTGTCGCGTTTGAGATAACGGATCGGACAAAACCGATTGAAAGAAATTTTCAAAAAATGAAAAAAAGTTCTTGACAAAACAGACTTGATAAGATATAATAAACAAGCTGTCGCCGAGAACGACAACAAAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATTTATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTT GAGGGTTCAAATCCCTCCTTCTCCGCTTATTATTTACAATATGAGTTGTTCGAATTTTTTTTGAGAAAGTTGTTGACAAATCGCACGAACTATTATAACATGAATGAGTTGCGAAAATAAAGAATTATAAATTGTTTAAAAAAACATGAAAATTCAAAAAAACAACAAATTTAAAAAAGTTCTTGACAAACAAAACAACACATGATAAAATATCAAAGTTGTCGCGTTTGAGATAACGGATCGGACAAAACCGATTGAAAGAAATTTTCAAAAAATGAAAAAAAGTTCTTGACAAAACAGACTTGATAAGATATAATAAACAAGCTGTCGCCGAGAACGACAACAAAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATTTATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTTAACATGAGAGTTTGATCCTGGCTCA AAAAAGTTTTCCTGTCCAGTTATAAACTGGCTTAATCAGATAAATCTGATTTACTGTTTTAAGGTTGTTTCTTTATAGAAACGTTCGTGTGTTGTTATTCACAACACCCTGAAATTCATTGAATCTTTCAAGGTTATTTCACTGTTCAGTTATCAAGGTTCTTTGTTTTGTTGTCGTTCTCGGCGACAGCTTGTTTATTATATCTTATCAAGTCTGTTTTGTCAAGAACTTTTTTTCATTTTTTGAAAATTTCTTTCAATCGGTTTTGTCCGATCCGTTATCTCAAACGCGACAACTTTGATA 303 TTerm_0610 NZ_LR027880.1 24854 24859 6 24865 24870 6 5 100 0 12 83 16 83 16 0 24861 TTGAAA TTTCAA True AAAACCGAT AAAATGAAA True False - TTGAAA ATTTC TTTCAA ATCGGTTTT 32 RIL182_RS00110 intergenic 24624 25112 + down CTTATTATTTACAATATGAGTTGTTCGAATTTTTTTTGAGAAAGTTGTTGACAAATCGCACGAACTATTATAACATGAATGAGTTGCGAAAATAAAGAATTATAAATTGTTTAAAAAAACATGAAAATTCAAAAAAACAACAAATTTAAAAAAGTTCTTGACAAACAAAACAACACATGATAAAATATCAAAGTTGTCGCGTTTGAGATAACGGATCGGACAAAACCGATTGAAAGAAATTTTCAAAAAATGAAAAAAAGTTCTTGACAAAACAGACTTGATAAGATATAATAAACAAGCTGTCGCCGAGAACGACAACAAAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATTTATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTT GAGGGTTCAAATCCCTCCTTCTCCGCTTATTATTTACAATATGAGTTGTTCGAATTTTTTTTGAGAAAGTTGTTGACAAATCGCACGAACTATTATAACATGAATGAGTTGCGAAAATAAAGAATTATAAATTGTTTAAAAAAACATGAAAATTCAAAAAAACAACAAATTTAAAAAAGTTCTTGACAAACAAAACAACACATGATAAAATATCAAAGTTGTCGCGTTTGAGATAACGGATCGGACAAAACCGATTGAAAGAAATTTTCAAAAAATGAAAAAAAGTTCTTGACAAAACAGACTTGATAAGATATAATAAACAAGCTGTCGCCGAGAACGACAACAAAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATTTATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTTAACATGAGAGTTTGATCCTGGCTCA AAAAAGTTTTCCTGTCCAGTTATAAACTGGCTTAATCAGATAAATCTGATTTACTGTTTTAAGGTTGTTTCTTTATAGAAACGTTCGTGTGTTGTTATTCACAACACCCTGAAATTCATTGAATCTTTCAAGGTTATTTCACTGTTCAGTTATCAAGGTTCTTTGTTTTGTTGTCGTTCTCGGCGACAGCTTGTTTATTATATCTTATCAAGTCTGTTTTGTCAAGAACTTTTTTTCATTTTTTGAAAATTTCTTTCA 258 TTerm_0611 NZ_LR027880.1 27130 27135 6 27140 27145 6 4 100 0 12 66 33 66 33 0 27137 GGTAAA TTTACC True AACAAAACG AAACGCGTT True False - GGTAAA TTTC TTTACC CGTTTTGTT 40 RIL182_RS00120 intergenic 26806 27207 + down TTAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAATTCAACGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAGAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAACCATGAAGCATTTCTTTGAAAGTGCAGAATGGTGCGGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGAG ATGGGAAAGCAGGTGGCTGCCAGATTTAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAATTCAACGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAGAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAACCATGAAGCATTTCTTTGAAAGTGCAGAATGGTGCGGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGTG CTCTTAACCAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTTAAAAACGCGTTTGGTAAATTTCTTTAC 77 TTerm_0612 NZ_LR027880.1 30558 30568 11 30574 30584 11 5 90 0 17 59 40 60 40 0 30570 AAGGCTTTAGG CCTAAAGTCTT True GAAAATAGA TTGTTGTAT True True - AAGACTTTAGG AAAAA CCTAAAGCCTT TCTATTTTC 50 RIL182_RS00140 intergenic 30547 30832 + down CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCA ATCGGTTCGATTCCGATTGTCGCCTCTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCATGGAGAATAAAAAAGGTGTATTGTT TGCTTTGCACTTTTGTGCGTTTTAAAGCTTTTTTTGTCCTTTGCTTTTTTACACTTTTCACAGCTGTTTTCATCTTCTTATTGGCCATAATACTAACCCTTTCGAGCAGAATATTCTGCCTCTTCCCCATGTAATATTTTTAAAATATATACTAGAATATCACAAAAAATAGATTTTAAAAAGTCAATTTTTGTAAATTTATACTTTTTATTGCCTTTTTTGTTTCTTTCTAATTACGAATACAACAAAAGACTTTAGGAAAAACCTAAAGCCT 274 TTerm_0613 NZ_LR027880.1 30631 30644 14 30651 30664 14 6 78 0 13 92 7 100 0 0 30647 ATAAATTTACAAAA TTTTTAAAATCTAT True TAAAAAGTA TTTTTGTGA True True - ATAGATTTTAAAAA GTCAAT TTTTGTAAATTTAT TACTTTTTA 26 RIL182_RS00140 intergenic 30547 30832 + down CTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCA ATCGGTTCGATTCCGATTGTCGCCTCTGAAAATAGAAGGCTTTAGGTTTTTCCTAAAGTCTTTTGTTGTATTCGTAATTAGAAAGAAACAAAAAAGGCAATAAAAAGTATAAATTTACAAAAATTGACTTTTTAAAATCTATTTTTTGTGATATTCTAGTATATATTTTAAAAATATTACATGGGGAAGAGGCAGAATATTCTGCTCGAAAGGGTTAGTATTATGGCCAATAAGAAGATGAAAACAGCTGTGAAAAGTGTAAAAAAGCAAAGGACAAAAAAAGCTTTAAAACGCACAAAAGTGCAAAGCATGGAGAATAAAAAAGGTGTATTGTT TGCTTTGCACTTTTGTGCGTTTTAAAGCTTTTTTTGTCCTTTGCTTTTTTACACTTTTCACAGCTGTTTTCATCTTCTTATTGGCCATAATACTAACCCTTTCGAGCAGAATATTCTGCCTCTTCCCCATGTAATATTTTTAAAATATATACTAGAATATCACAAAAAATAGATTTTAAAAAGTCAATTTTTGTAAATTTA 201 TTerm_0614 NZ_LR027880.1 35962 35970 9 35977 35985 9 6 88 0 13 27 72 25 75 0 35973 GCCCGGACA TGTCTGGGC True GCAAAACAG GATAGGCTC True False - GCCCAGACA GTTGCG TGTCCGGGC CTGTTTTGC 50 RIL182_RS00170 intergenic 35803 36077 - down ACGAACCGAGAATATCCCGAAAGTCCCACCGGGACTAAGGGCGCACTTCTATACTCTCCTGACGGGAGTATGTGCGTCCTGCGGAGCCTATCGCCCAGACAGTTGCGTGTCCGGGCTGTTTTGCGTCGCGTTGCTCCGTACAAGTGGCTGCACCCCTTGCGATGCTTGCGCATCTATCCCTGCCCACTTCGCAGCGGAAACAATCTGCTGACGCAGACAATTTCCGCCGCAAAGTCTGAACAACTATTTCACTAATTTCGAAGGAGGTCACACA TCGTCTGGCAGCGAAAGAAAAGCTGACGAACCGAGAATATCCCGAAAGTCCCACCGGGACTAAGGGCGCACTTCTATACTCTCCTGACGGGAGTATGTGCGTCCTGCGGAGCCTATCGCCCAGACAGTTGCGTGTCCGGGCTGTTTTGCGTCGCGTTGCTCCGTACAAGTGGCTGCACCCCTTGCGATGCTTGCGCATCTATCCCTGCCCACTTCGCAGCGGAAACAATCTGCTGACGCAGACAATTTCCGCCGCAAAGTCTGAACAACTATTTCACTAATTTCGAAGGAGGTCACACAATGCCTAAACAGAAAAACCTTGCCG ACGAACCGAGAATATCCCGAAAGTCCCACCGGGACTAAGGGCGCACTTCTATACTCTCCTGACGGGAGTATGTGCGTCCTGCGGAGCCTATCGCCCAGACAGTTGCGTGTCCGGG 115 TTerm_0615 NZ_LR027880.1 50684 50700 17 50706 50722 17 5 100 0 34 58 41 58 41 0 50702 CAAAAGCTGTCTGTTTC GAAACAGACAGCTTTTG True ACGAAAATC CAACCTTAC True True - CAAAAGCTGTCTGTTTC CAACA GAAACAGACAGCTTTTG GATTTTCGT 84 RIL182_RS00245 intergenic 50611 51054 + down CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTA CCCCTTCAACATCATCGAGCCGTAACGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTATGAAAAATGATATGAAGCTTGTGCG TAAAATCCTCATTTCTGAGCAACTTGTTGTGAAGATACGATGAGAATCTCAAATTTTCATCTGCAATCAAAGCTATTTGTTTTTGCTCAGAAACAAATAGCCGTGCGAAAAATAAGCTATCAAGCTTATTTTTCGCACTACTTTCTCCATGGGATCCTGGTTTCATGACAGTTATTTGGGATATCCATTTTTTCTGTCATATATATAGTCCGTAAAAGTGCCTATTCTGTTGCAGAAAAACCCCGAAAATTTGGCTTAACAGTGATAAGGAAGTAATTCTAATTTTTACTGTTGGCTGACAGATTCGGGTGTGCAGGGCAACCGTAAGGTTGCAAAAGCTGTCTGTTTCCAACAGAAACAGACAGCTTTT 370 TTerm_0616 NZ_LR027880.1 50917 50932 16 50937 50952 16 4 100 0 32 62 37 62 37 0 50934 GTGCGAAAAATAAGCT AGCTTATTTTTCGCAC True AGAAAGTAG GGCTATTTG True True - GTGCGAAAAATAAGCT ATCA AGCTTATTTTTCGCAC CTACTTTCT 80 RIL182_RS00245 intergenic 50611 51054 + down CGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTA CCCCTTCAACATCATCGAGCCGTAACGGCTTCGCGGGGCGGTCCGTGGGAAGACCGCCCCGCTCGAGAGAAAACAGCGAGATGCTTTCAACGAAAATCAAAAGCTGTCTGTTTCTGTTGGAAACAGACAGCTTTTGCAACCTTACGGTTGCCCTGCACACCCGAATCTGTCAGCCAACAGTAAAAATTAGAATTACTTCCTTATCACTGTTAAGCCAAATTTTCGGGGTTTTTCTGCAACAGAATAGGCACTTTTACGGACTATATATATGACAGAAAAAATGGATATCCCAAATAACTGTCATGAAACCAGGATCCCATGGAGAAAGTAGTGCGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAAACAAATAGCTTTGATTGCAGATGAAAATTTGAGATTCTCATCGTATCTTCACAACAAGTTGCTCAGAAATGAGGATTTTATGAAAAATGATATGAAGCTTGTGCG TAAAATCCTCATTTCTGAGCAACTTGTTGTGAAGATACGATGAGAATCTCAAATTTTCATCTGCAATCAAAGCTATTTGTTTTTGCTCAGAAACAAATAGCCGTGCGAAAAATAAGCTATCAAGCTTATTTTTCGCA 137 TTerm_0617 NZ_LR027880.1 101609 101618 10 101624 101633 10 5 90 0 15 35 65 33 66 0 101620 ACCCCTCGGT ACAGAGGGGT True CAGGTAAAA ACGTTTGCA True False - ACCCCTCTGT TAGAT ACCGAGGGGT TTTTACCTG 54 RIL182_RS00470 intergenic 101570 101754 + down CCGTTGCTGGTGTGGCGTAAGCCACGCCAGCAGGTAAAACCCCTCGGTATCTAACAGAGGGGTACGTTTGCAAATAGACAATAGACAAAAAACATAGGAAACATAAGGCTTCTGGCATGATTTCCTAGCAAAAATCGGTTGTGAAGTCGCCTAAAAAAACTTCACACTTGACAGATTGGGGGTA AGCGAAAGGCGACGGCACGGACTAGCCGTTGCTGGTGTGGCGTAAGCCACGCCAGCAGGTAAAACCCCTCGGTATCTAACAGAGGGGTACGTTTGCAAATAGACAATAGACAAAAAACATAGGAAACATAAGGCTTCTGGCATGATTTCCTAGCAAAAATCGGTTGTGAAGTCGCCTAAAAAAACTTCACACTTGACAGATTGGGGGTATGGTTCTGAATGAAGAACAATGGAT TACCCCCAATCTGTCAAGTGTGAAGTTTTTTTAGGCGACTTCACAACCGATTTTTGCTAGGAAATCATGCCAGAAGCCTTATGTTTCCTATGTTTTTTGTCTATTGTCTATTTGCAAACGTACCCCTCTGTTAGATACCGAGGGG 145 TTerm_0618 NZ_LR027880.1 103325 103332 8 103337 103344 8 4 87 0 11 81 18 85 14 0 103334 TGAAATTA TAATTGCA True TAAAATATT GAGCAAAAA True False - TGCAATTA AAGA TAATTTCA AATATTTTA 30 RIL182_RS00490 intergenic 103319 103463 + down AATATTGAAATTATCTTTAATTGCAGAGCAAAAAATGATATGATAACATAAAATCTTTCATAAAAACAAAATACATTCTTTCGTGCTTTTTAAGATTTTTACTGTATCATTTTATTTAAAATTACTGTGAAAGGACGATTACTA GTTCAATAAGATTATCGGTGCATAAAATATTGAAATTATCTTTAATTGCAGAGCAAAAAATGATATGATAACATAAAATCTTTCATAAAAACAAAATACATTCTTTCGTGCTTTTTAAGATTTTTACTGTATCATTTTATTTAAAATTACTGTGAAAGGACGATTACTATGTTATCTACAATTTATGCTTTGCT TAGTAATCGTCCTTTCACAGTAATTTTAAATAAAATGATACAGTAAAAATCTTAAAAAGCACGAAAGAATGTATTTTGTTTTTATGAAAGATTTTATGTTATCATATCATTTTTTGCTCTGCAATTAAAGATAATTTC 138 TTerm_0619 NZ_LR027880.1 118268 118284 17 118293 118309 17 8 82 0 19 58 41 57 42 0 118288 AAATACCGATAAAGCCC GGGATATATCGGCATTT True CCGAAAAAA ACCAACTTA True False - AAATGCCGATATATCCC GTATTTTA GGGCTTTATCGGTATTT TTTTTTCGG 62 RIL182_RS00590 intergenic 118176 118472 + down TATCGGAGCGTATATTTACTACTCATTTACTACTTTTGGTTGCATTTTCATGCTGGTAAATGCCAGCTTATGCAAGGTATCTTCCGAAAAAAAATACCGATAAAGCCCTAAAATACGGGATATATCGGCATTTACCAACTTATGAAAAGATAATCAGAAATTTAGTAAGTTTTTATTATAAAAAATAATATATTTCAATAGAAAAAAAGAACAATCAATTTTACGAATATTTATAATGCTCTGGGGGGAGCAGTTTAAATATTAAATAAAGCCAAAAGAAAGAGGAGGAAAAAGTA AGAACTGGAAAGACTGGCTTGTTAATATCGGAGCGTATATTTACTACTCATTTACTACTTTTGGTTGCATTTTCATGCTGGTAAATGCCAGCTTATGCAAGGTATCTTCCGAAAAAAAATACCGATAAAGCCCTAAAATACGGGATATATCGGCATTTACCAACTTATGAAAAGATAATCAGAAATTTAGTAAGTTTTTATTATAAAAAATAATATATTTCAATAGAAAAAAAGAACAATCAATTTTACGAATATTTATAATGCTCTGGGGGGAGCAGTTTAAATATTAAATAAAGCCAAAAGAAAGAGGAGGAAAAAGTATGGCAAAATATGTAATGGCACTGGA TACTTTTTCCTCCTCTTTCTTTTGGCTTTATTTAATATTTAAACTGCTCCCCCCAGAGCATTATAAATATTCGTAAAATTGATTGTTCTTTTTTTCTATTGAAATATATTATTTTTTATAATAAAAACTTACTAAATTTCTGATTATCTTTTCATAAGTTGGTAAATGCCGATATATCCCGTATTTTAGGGCTTTATCGGTATT 204 TTerm_0620 NZ_LR027880.1 118326 118338 13 118343 118355 13 4 76 0 11 88 11 100 0 0 118340 ATAATCAGAAATT AAGTTTTTATTAT True ATGAAAAGA AAAAAATAA True False - ATAATAAAAACTT ACTA AATTTCTGATTAT TCTTTTCAT 30 RIL182_RS00590 intergenic 118176 118472 + down TATCGGAGCGTATATTTACTACTCATTTACTACTTTTGGTTGCATTTTCATGCTGGTAAATGCCAGCTTATGCAAGGTATCTTCCGAAAAAAAATACCGATAAAGCCCTAAAATACGGGATATATCGGCATTTACCAACTTATGAAAAGATAATCAGAAATTTAGTAAGTTTTTATTATAAAAAATAATATATTTCAATAGAAAAAAAGAACAATCAATTTTACGAATATTTATAATGCTCTGGGGGGAGCAGTTTAAATATTAAATAAAGCCAAAAGAAAGAGGAGGAAAAAGTA AGAACTGGAAAGACTGGCTTGTTAATATCGGAGCGTATATTTACTACTCATTTACTACTTTTGGTTGCATTTTCATGCTGGTAAATGCCAGCTTATGCAAGGTATCTTCCGAAAAAAAATACCGATAAAGCCCTAAAATACGGGATATATCGGCATTTACCAACTTATGAAAAGATAATCAGAAATTTAGTAAGTTTTTATTATAAAAAATAATATATTTCAATAGAAAAAAAGAACAATCAATTTTACGAATATTTATAATGCTCTGGGGGGAGCAGTTTAAATATTAAATAAAGCCAAAAGAAAGAGGAGGAAAAAGTATGGCAAAATATGTAATGGCACTGGA TACTTTTTCCTCCTCTTTCTTTTGGCTTTATTTAATATTTAAACTGCTCCCCCCAGAGCATTATAAATATTCGTAAAATTGATTGTTCTTTTTTTCTATTGAAATATATTATTTTTTATAATAAAAACTTACTAAATTTCTGATTA 146 TTerm_0621 NZ_LR027880.1 124129 124151 23 124160 124182 23 8 91 0 36 52 47 52 47 0 124155 AAACATCCGGGGCAAAACAGATA TATCCGTTTCGCCCCGGATGTTT True TAAATTTTA TTGCAATCA True True - AAACATCCGGGGCGAAACGGATA CTCAAAGA TATCTGTTTTGCCCCGGATGTTT TAAAATTTA 96 RIL182_RS00615 intergenic 124096 124208 + down GTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTTTTGCAATCATTTTATGGTCAGCTTTT GATCGCAACGAAAAATGTGGAGTAAGTTATAGATTACATGCGGTGTGAATAAATTTTAAACATCCGGGGCAAAACAGATATCTTTGAGTATCCGTTTCGCCCCGGATGTTTTTGCAATCATTTTATGGTCAGCTTTTTATTTGCTATAAAATACTGATGTAG AAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTT 79 TTerm_0622 NZ_LR027880.1 124129 124151 23 124160 124182 23 8 91 0 36 52 47 52 47 0 124155 AAACATCCGGGGCAAAACAGATA TATCCGTTTCGCCCCGGATGTTT True TAAATTTTA TTGCAATCA True True - AAACATCCGGGGCGAAACGGATA CTCAAAGA TATCTGTTTTGCCCCGGATGTTT TAAAATTTA 96 RIL182_RS00620 intergenic 124096 124208 - down AAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTTTAAAATTTATTCACACCGCATGTAATCTATAAC CTACATCAGTATTTTATAGCAAATAAAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTTTAAAATTTATTCACACCGCATGTAATCTATAACTTACTCCACATTTTTCGTTGCGATC AAAAGCTGACCATAAAATGATTGCAAAAACATCCGGGGCGAAACGGATACTCAAAGATATCTGTTTTGCCCCGGATGTT 79 TTerm_0623 NZ_LR027880.1 130628 130647 20 130655 130674 20 7 80 0 20 70 30 75 25 0 130650 AAAACCTTTCGTCCTTTTAT ATAAAAAGATGGGAGGTTTT True CATTTTATA TTTATGTCG True True - AAAACCTCCCATCTTTTTAT CTTTATC ATAAAAGGACGAAAGGTTTT TATAAAATG 40 RIL182_RS00635 intergenic 130588 130678 + down TAAAAAAACGATACTCAATTAAAAAATAAGACATTTTATAAAACCTTTCGTCCTTTTATGATAAAGATAAAAAGATGGGAGGTTTTTTTA AGAGAATATTAATATTTCCATTTAATAAAAAAACGATACTCAATTAAAAAATAAGACATTTTATAAAACCTTTCGTCCTTTTATGATAAAGATAAAAAGATGGGAGGTTTTTTTATGTCGAAAAAAATAAAACTGCATCA TAAAAAAACCTCCCATCTTTTTATCTTTATCATAAAAGGACGAAAGGTTT 50 TTerm_0624 NZ_LR027880.1 156274 156299 26 156307 156332 26 7 76 0 22 57 42 55 45 0 156302 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True - AAAATTGATATCCCCTGCTTTGCCTG GAATTCA CAGGCAGAACAGGGGCTTTTATTTTT TTAAAGCGA 76 RIL182_RS00750 intergenic 156252 156470 + down GCGCGCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA ACTTCGCCAGAAAAAGAAGTCTTAAGCGCGCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA TATAAGTTAGCAGTTTCTTCAATGCTAATTTTTCATTCAGGACACCTTCTTTCGTATGTTTTGTTCCATAACATAATTATACAATAAAAGGTGTCCTTTTTGAGTGATTATACAGAAAAAAACAGTAATTTGATACCCAAAATTGATATCCCCTGCTTTGCCTGGAATTCACAGGCAGAACAGGGGCTTTTATTTT 196 TTerm_0625 NZ_LR027880.1 159991 160005 15 160011 160025 15 5 93 0 25 50 50 50 50 0 160007 AAAACGTGGCATGGC GCTATGCCACGTTTT True ACAGAATAA GTGTGGAAA True True - AAAACGTGGCATAGC TTTAC GCCATGCCACGTTTT TTATTCTGT 74 RIL182_RS00770 intergenic 159906 160121 + down GACGGATGATTGGAACTGTTGGTACGGGTAGAATTTTCCGTGCATGACAGTACGTTTTAAATACAAAACAAATATGACAGAATAAAAACGTGGCATGGCGTAAAGCTATGCCACGTTTTGTGTGGAAACACATGTGAAAAATTGAATTTTCTACATGTAGGAATGTGCTTATGTTCAAATTTGTTATACAGAAAGACTGTGCAGGAATGTACTTA TATCATCACTGCAGCACTTGCATAAGACGGATGATTGGAACTGTTGGTACGGGTAGAATTTTCCGTGCATGACAGTACGTTTTAAATACAAAACAAATATGACAGAATAAAAACGTGGCATGGCGTAAAGCTATGCCACGTTTTGTGTGGAAACACATGTGAAAAATTGAATTTTCTACATGTAGGAATGTGCTTATGTTCAAATTTGTTATACAGAAAGACTGTGCAGGAATGTACTTATGCTCAAATTTGTGATACAAAAAGA TAAGTACATTCCTGCACAGTCTTTCTGTATAACAAATTTGAACATAAGCACATTCCTACATGTAGAAAATTCAATTTTTCACATGTGTTTCCACACAAAACGTGGCATAGCTTTACGCCATGCCACGTTT 130 TTerm_0626 NZ_LR027880.1 178659 178675 17 178681 178697 17 5 94 0 29 67 32 68 31 0 178677 AAAAAACGGATAGTGCA TGCATTATCCGTTTTTT True TAACTGTAA GTCAAAAAA True True - AAAAAACGGATAATGCA TTTTT TGCACTATCCGTTTTTT TTACAGTTA 74 RIL182_RS00880 intergenic 178527 178899 + down ACTCTGCCTTTCTAATTGAGAAAGTGGTTCTATATTCGAATAAGGTCATGCCGGTGTATTTTTTAGTAATCCGGTTCAGATAGTCACCGCTGTAACTGAGCAGACCAGCCTGGATGGAAACAATAACTGTAAAAAAACGGATAGTGCAAAAAATGCATTATCCGTTTTTTGTCAAAAAAAGTTGAAGAGCGTCGTTAAAACACTAAAAATATACATTTGTAATTGACGTGTATTTTACAAAACATTAAAATAAAAATGGTGAATCACGCAAATATAAACGAAAAAGGAATGATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTGAGATGCGCAAAAGACAGCGCAAGAA AGAGTATGGATTCTACATAAGATAAACTCTGCCTTTCTAATTGAGAAAGTGGTTCTATATTCGAATAAGGTCATGCCGGTGTATTTTTTAGTAATCCGGTTCAGATAGTCACCGCTGTAACTGAGCAGACCAGCCTGGATGGAAACAATAACTGTAAAAAAACGGATAGTGCAAAAAATGCATTATCCGTTTTTTGTCAAAAAAAGTTGAAGAGCGTCGTTAAAACACTAAAAATATACATTTGTAATTGACGTGTATTTTACAAAACATTAAAATAAAAATGGTGAATCACGCAAATATAAACGAAAAAGGAATGATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTGAGATGCGCAAAAGACAGCGCAAGAATGGAGATTAATTTGAAAAAGTACAT TTCTTGCGCTGTCTTTTGCGCATCTCAAGTTTGTGCGTAAGCACAAATCTTGCGTGTGAAAAATCTTATTTTTCACACTATCATTCCTTTTTCGTTTATATTTGCGTGATTCACCATTTTTATTTTAATGTTTTGTAAAATACACGTCAATTACAAATGTATATTTTTAGTGTTTTAACGACGCTCTTCAACTTTTTTTGACAAAAAACGGATAATGCATTTTTTGCACTATCCGTTTTT 240 TTerm_0627 NZ_LR027880.1 187306 187311 6 187316 187321 6 4 100 0 12 83 16 83 16 0 187313 GTTATT AATAAC True AAAAAAAAG CAAAGTTAG True False - GTTATT TGTC AATAAC CTTTTTTTT 32 RIL182_RS00920 intergenic 186938 187460 + down CACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCA ATCAAATTTGATCAATATAGAATGACACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCATGAGCAGGGAAGTGTTAGAGATTCT TGGTCATCTCCCATAGAACAACAGATCTCTCGATCCATTGTTTTAACATATATAGTTAGTTTATCCTAACTCCTGTTTAAAAAAGAAAGAGTTGCTAGAACTCATTTCCTTTTCTGATAGTTAGATTACACTAACTTTGGTTATTTGTCAATAA 154 TTerm_0628 NZ_LR027880.1 187348 187362 15 187368 187381 14 5 86 6 13 75 24 76 23 0 187364 AAAAGGAAATGAGTT AACTCTTTCTTTTT True ACTATCAGA TAAACAGGA True True - AAAAAGAAAGAGTT GCTAG AACTCATTTCCTTTT TCTGATAGT 42 RIL182_RS00920 intergenic 186938 187460 + down CACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCA ATCAAATTTGATCAATATAGAATGACACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCATGAGCAGGGAAGTGTTAGAGATTCT TGGTCATCTCCCATAGAACAACAGATCTCTCGATCCATTGTTTTAACATATATAGTTAGTTTATCCTAACTCCTGTTTAAAAAAGAAAGAGTTGCTAGAACTCATTTCCTTT 112 TTerm_0629 NZ_LR027880.1 187416 187429 14 187434 187447 14 4 78 0 13 67 32 72 27 0 187431 TAAAACAATGGATC GATCTGTTGTTCTA True ATATATGTT TGGGAGATG True False - TAGAACAACAGATC TCTC GATCCATTGTTTTA AACATATAT 50 RIL182_RS00920 intergenic 186938 187460 + down CACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCA ATCAAATTTGATCAATATAGAATGACACTAAATCATACACTCTTAAAATAATGATGTTGGGGGCAAATAGTGCATTCACAACATAACGACTGGCAAATTGCACAAAGCCGAGACTGCTTTTGTGACTTTGGGAGAAAATTAGTAAATCTTAGACTGCCTGGTAATACACAGTGATGTTCTGCCACGGATGGCAGAACAAGGCAGCATCGAGTCATGGAGGACTCGTTGTTGCCATTCACGTCACTCTGAGAAAACCTGACTCAGGCAGGCTTAGATTTTCTTATTTTCGTACAACGGAACAAAACAGACACGGCTTTGTGCAATTTGTCAATCAAGAAGTTTAAATGCACTATCTGCCCCCAACATCAAAATAATAGAAAAATTAAAAAAAAGTTATTGACAAATAACCAAAGTTAGTGTAATCTAACTATCAGAAAAGGAAATGAGTTCTAGCAACTCTTTCTTTTTTAAACAGGAGTTAGGATAAACTAACTATATATGTTAAAACAATGGATCGAGAGATCTGTTGTTCTATGGGAGATGACCATGAGCAGGGAAGTGTTAGAGATTCT TGGTCATCTCCCATAGAACAACAGATCTCTCGATCCATTGTTTT 44 TTerm_0630 NZ_LR027880.1 194045 194058 14 194067 194080 14 8 92 0 23 32 67 30 69 0 194062 AGAAGGGGAGGCCG CGGCTTCCCCTTCT True CATAAAAGA TCTACGATC True False - AGAAGGGGAAGCCG AGTAACCA CGGCCTCCCCTTCT TCTTTTATG 78 RIL182_RS00955 intergenic 193986 194062 + down GGAATTGTTACGGGCACAGAAATTGTATTTTGCAGATCAAAAAAGATAAGCATAAAAGAGAAGGGGAGGCCGTGGT ATATGAGGTAACTAACATTCAGTAAGGAATTGTTACGGGCACAGAAATTGTATTTTGCAGATCAAAAAAGATAAGCATAAAAGAGAAGGGGAGGCCGTGGTTACTCGGCTTCCCCTTCTTCTACGA ACCACGGCCTCCCCTTC 17 TTerm_0631 NZ_LR027880.1 194045 194058 14 194067 194080 14 8 92 0 23 32 67 30 69 0 194062 AGAAGGGGAGGCCG CGGCTTCCCCTTCT True CATAAAAGA TCTACGATC True False - AGAAGGGGAAGCCG AGTAACCA CGGCCTCCCCTTCT TCTTTTATG 78 RIL182_RS21045 intergenic 193986 194062 - down ACCACGGCCTCCCCTTCTCTTTTATGCTTATCTTTTTTGATCTGCAAAATACAATTTCTGTGCCCGTAACAATTCC TCGTAGAAGAAGGGGAAGCCGAGTAACCACGGCCTCCCCTTCTCTTTTATGCTTATCTTTTTTGATCTGCAAAATACAATTTCTGTGCCCGTAACAATTCCTTACTGAATGTTAGTTACCTCATAT ACCACGGCCTCCCCTTC 17 TTerm_0632 NZ_LR027880.1 203101 203106 6 203111 203116 6 4 100 0 12 66 33 66 33 0 203108 GGTAAA TTTACC True AACAAAACG AAACGCGTT True False - GGTAAA TTTC TTTACC CGTTTTGTT 40 RIL182_RS00995 intergenic 202733 203178 + down TTAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAAATCAGCGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAGAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAGTCATAAAGCATTTTTTTGAAAGTGAAGAATGGTAAAAATCATGAATTACTTTTTCAAAAGTGTAAAATGACGCGGAAGTTGCGAAGCAACTTCTAATGCATGAGCGCCATTGCGCGAAATGCTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTGAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGAG ATGGGAAAGCAGGTGGCTGCCAGATTTAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAAATCAGCGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAGAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAGTCATAAAGCATTTTTTTGAAAGTGAAGAATGGTAAAAATCATGAATTACTTTTTCAAAAGTGTAAAATGACGCGGAAGTTGCGAAGCAACTTCTAATGCATGAGCGCCATTGCGCGAAATGCTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTGAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTGGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGTG CTCTTAACCAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTCAAAAACGCGTTTGGTAAATTTCTTTAC 77 TTerm_0633 NZ_LR027880.1 206828 206845 18 206850 206867 18 4 83 0 21 72 27 73 26 0 206847 AAAGATTGGAAGTGTTGA TCAACACTTCTTATTTTT True ATTAGCTAA GTACATTAA True True - AAAAATAAGAAGTGTTGA TTTT TCAACACTTCCAATCTTT TTAGCTAAT 58 RIL182_RS01035 intergenic 206820 206897 + down TTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTT CGGGGTTCGAATCCCCGATGTCTCATTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTTTAATTTAGCAAGTATCTTTGGTTGG AACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTT 69 TTerm_0634 NZ_LR027880.1 206828 206845 18 206850 206867 18 4 83 0 21 72 27 73 26 0 206847 AAAGATTGGAAGTGTTGA TCAACACTTCTTATTTTT True ATTAGCTAA GTACATTAA True True - AAAAATAAGAAGTGTTGA TTTT TCAACACTTCCAATCTTT TTAGCTAAT 58 RIL182_RS01040 intergenic 206820 206897 - down AACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAA CCAACCAAAGATACTTGCTAAATTAAACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAATGAGACATCGGGGATTCGAACCCCG AACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTT 69 TTerm_0635 NZ_LR027880.1 206869 206884 16 206889 206904 16 4 81 0 17 84 15 92 7 0 206886 TACATTAAAAAAATTG CACTTTGTTTAATTTA True TATTTTTGT GCAAGTATC True False - TAAATTAAACAAAGTG TAAT CAATTTTTTTAATGTA ACAAAAATA 50 RIL182_RS01035 intergenic 206820 206897 + down TTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTT CGGGGTTCGAATCCCCGATGTCTCATTAGCTAAAAGATTGGAAGTGTTGAAAAATCAACACTTCTTATTTTTGTACATTAAAAAAATTGATTACACTTTGTTTAATTTAGCAAGTATCTTTGGTTGG AACAAAGTGTAATCAATTTTTTTAATGT 28 TTerm_0636 NZ_LR027880.1 206869 206884 16 206889 206904 16 4 81 0 17 84 15 92 7 0 206886 TACATTAAAAAAATTG CACTTTGTTTAATTTA True TATTTTTGT GCAAGTATC True False - TAAATTAAACAAAGTG TAAT CAATTTTTTTAATGTA ACAAAAATA 50 RIL182_RS01040 intergenic 206820 206897 - down AACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAA CCAACCAAAGATACTTGCTAAATTAAACAAAGTGTAATCAATTTTTTTAATGTACAAAAATAAGAAGTGTTGATTTTTCAACACTTCCAATCTTTTAGCTAATGAGACATCGGGGATTCGAACCCCG AACAAAGTGTAATCAATTTTTTTAATGT 28 TTerm_0637 NZ_LR027880.1 208454 208467 14 208473 208486 14 5 78 0 13 82 17 90 9 0 208469 AAAGAAACTGTTTT AAAAAGGTTTATTT True ATGAAAAAA CCTTTTGAC True True - AAATAAACCTTTTT CACAT AAAACAGTTTCTTT TTTTTTCAT 34 RIL182_RS01045 intergenic 208052 208575 + down GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGT AAAGCAAGTATTCATAAAGAAATAGGATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGTTACAATAACTGCACATGAAACGCTA ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTT 121 TTerm_0638 NZ_LR027880.1 208454 208467 14 208473 208486 14 5 78 0 13 82 17 90 9 0 208469 AAAGAAACTGTTTT AAAAAGGTTTATTT True ATGAAAAAA CCTTTTGAC True True - AAATAAACCTTTTT CACAT AAAACAGTTTCTTT TTTTTTCAT 34 RIL182_RS01050 intergenic 208052 208575 - down ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATC TAGCGTTTCATGTGCAGTTATTGTAACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATCCTATTTCTTTATGAATACTTGCTTT ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTT 121 TTerm_0639 NZ_LR027880.1 208551 208566 16 208575 208590 16 8 75 0 12 62 37 66 33 0 208570 TGTGAAGTCCTGGTAA TTACAATAACTGCACA True GAAAAAAGT TGAAACGCT True False - TGTGCAGTTATTGTAA CCGAATCT TTACCAGGACTTCACA ACTTTTTTC 32 RIL182_RS01045 intergenic 208052 208575 + down GATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGT AAAGCAAGTATTCATAAAGAAATAGGATGAGATTAAACAAGAGGTTGTTAGAACAAATGTGTCTAACAACCTCTGAATTCATTATATAGAATATGTGATTCCGTCAAGTGTTAGCAAGCAAACTTTCTTTGTGGAAAGCAAGCATTTGACAGAATGATTACACTAAGTAGATGATGTGTTGCAAATGCCCTTTCTATCAGTATTTGAACATCGAGACTTAGGTTCGAATCCCTGATGTCTCATTAACTAAAATACAGCGAAAAGCCAGTAGAACTAAGGCTTTCCGCTATTTTTTTGTAATTTTTGAAGTGGTTTAAAAACATTTTGAACATTTACCATACCCTTTATGGATTGCTTCTTGTTCAGTGAATAAAAAAGGAGGAGCCAGTAAAACGGGGGATGTTTTACTGGCTTTGTTATGAAAAAAAAGAAACTGTTTTATGTGAAAAAGGTTTATTTCCTTTTGACATTATTTATAGTAAACGAAGTTCATGATGGAATTGTGGTAAATTTTTGAAAAAAGTGTGAAGTCCTGGTAAAGATTCGGTTACAATAACTGCACATGAAACGCTA ACCGAATCTTTACCAGGACTTCAC 24 TTerm_0640 NZ_LR027880.1 208551 208566 16 208575 208590 16 8 75 0 12 62 37 66 33 0 208570 TGTGAAGTCCTGGTAA TTACAATAACTGCACA True GAAAAAAGT TGAAACGCT True False - TGTGCAGTTATTGTAA CCGAATCT TTACCAGGACTTCACA ACTTTTTTC 32 RIL182_RS01050 intergenic 208052 208575 - down ACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATC TAGCGTTTCATGTGCAGTTATTGTAACCGAATCTTTACCAGGACTTCACACTTTTTTCAAAAATTTACCACAATTCCATCATGAACTTCGTTTACTATAAATAATGTCAAAAGGAAATAAACCTTTTTCACATAAAACAGTTTCTTTTTTTTCATAACAAAGCCAGTAAAACATCCCCCGTTTTACTGGCTCCTCCTTTTTTATTCACTGAACAAGAAGCAATCCATAAAGGGTATGGTAAATGTTCAAAATGTTTTTAAACCACTTCAAAAATTACAAAAAAATAGCGGAAAGCCTTAGTTCTACTGGCTTTTCGCTGTATTTTAGTTAATGAGACATCAGGGATTCGAACCTAAGTCTCGATGTTCAAATACTGATAGAAAGGGCATTTGCAACACATCATCTACTTAGTGTAATCATTCTGTCAAATGCTTGCTTTCCACAAAGAAAGTTTGCTTGCTAACACTTGACGGAATCACATATTCTATATAATGAATTCAGAGGTTGTTAGACACATTTGTTCTAACAACCTCTTGTTTAATCTCATCCTATTTCTTTATGAATACTTGCTTT ACCGAATCTTTACCAGGACTTCAC 24 TTerm_0641 NZ_LR027880.1 227141 227162 22 227167 227189 23 4 91 4 29 57 42 57 42 0 227164 AGCAAAAAATCCGTGCGGATCA TGATCCTGCACGGATTTTTTACT True AGGCTGACA TATTCATGA True True - AGTAAAAAATCCGTGCAGGATCA GTTT TGATCCGCACGGATTTTTTGCT TGTCAGCCT 82 RIL182_RS01110 intergenic 227093 227229 + down AAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACTTATTCATGACAACAGGTTTCCTGTGAGGCGGTCTATTGTT AAATGCAGTGCGCTGTGGAAAATAAAAAGATTTATCATAATAATGATTATCTGGAGCGTAGATAAGGCTGACAGCAAAAAATCCGTGCGGATCAAAACTGATCCTGCACGGATTTTTTACTTATTCATGACAACAGGTTTCCTGTGAGGCGGTCTATTGTTTAGTTCAACATATTTAAGAACTGTG AACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGC 88 TTerm_0642 NZ_LR027880.1 227141 227162 22 227167 227189 23 4 91 4 29 57 42 57 42 0 227164 AGCAAAAAATCCGTGCGGATCA TGATCCTGCACGGATTTTTTACT True AGGCTGACA TATTCATGA True True - AGTAAAAAATCCGTGCAGGATCA GTTT TGATCCGCACGGATTTTTTGCT TGTCAGCCT 82 RIL182_RS01115 intergenic 227093 227229 - down AACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGCTGTCAGCCTTATCTACGCTCCAGATAATCATTATTATGATAAATCTTT CACAGTTCTTAAATATGTTGAACTAAACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGCTGTCAGCCTTATCTACGCTCCAGATAATCATTATTATGATAAATCTTTTTATTTTCCACAGCGCACTGCATTT AACAATAGACCGCCTCACAGGAAACCTGTTGTCATGAATAAGTAAAAAATCCGTGCAGGATCAGTTTTGATCCGCACGGATTTTTTGC 88 TTerm_0643 NZ_LR027880.1 241121 241133 13 241140 241152 13 6 76 0 11 69 30 70 30 0 241136 AAATTGATCTGGA TCCAGCATAATTT True TGTTGTTAA CTAGCTATT True False - AAATTATGCTGGA AATCTG TCCAGATCAATTT TTAACAACA 54 RIL182_RS01165 intergenic 241121 241228 + down AATTGATCTGGACAGATTTCCAGCATAATTTCTAGCTATTCCCCTTTATTTGTGATACACTGGAACAAGAGTGTATCGTGAATTTTTACAGAGAGGATAAAAAGCTA GAAAGCCGGGTTGAAGTGTTGTTAAAATTGATCTGGACAGATTTCCAGCATAATTTCTAGCTATTCCCCTTTATTTGTGATACACTGGAACAAGAGTGTATCGTGAATTTTTACAGAGAGGATAAAAAGCTATGCAGGATTATGATGAGAGTTTTTT TAGCTTTTTATCCTCTCTGTAAAAATTCACGATACACTCTTGTTCCAGTGTATCACAAATAAAGGGGAATAGCTAGAAATTATGCTGGAAATCTGTCCAGATCAATT 107 TTerm_0644 NZ_LR027880.1 246803 246827 25 246836 246860 25 8 72 0 15 86 14 100 0 0 246831 TATATTCGATTTGGATATGATATAT ATAAATAATATGTAAATGATATATA True CAAAATGAT AATGACATA True False - TATATATCATTTACATATTATTTAT ATTTATTA ATATATCATATCCAAATCGAATATA ATCATTTTG 30 RIL182_RS01195 intergenic 246664 246886 + down TACCTGCTTCTGACAGAAGTGCATCTGATTTTTCCGCATCAAACGGAGAAAGCAGATGTTTTTTTTCGTTGGGAACATGGTGAGCAGTAATTTTCCGTTGCGTGTAAGTCTTGTCTTTACAAATACACAACAAAATGATATATTCGATTTGGATATGATATATTAATAAATATAAATAATATGTAAATGATATATAAATGACATATAAAAAGGAGGAAAAAA GATATTGGAAGAGGCAGGGAAATAGTACCTGCTTCTGACAGAAGTGCATCTGATTTTTCCGCATCAAACGGAGAAAGCAGATGTTTTTTTTCGTTGGGAACATGGTGAGCAGTAATTTTCCGTTGCGTGTAAGTCTTGTCTTTACAAATACACAACAAAATGATATATTCGATTTGGATATGATATATTAATAAATATAAATAATATGTAAATGATATATAAATGACATATAAAAAGGAGGAAAAAATGAAACTGGGGATCGATATGGGCGG TTTTTTCCTCCTTTTTATATGTCATTTATATATCATTTACATATTATTTATATTTATTAATATATCATATCCAAATCGAATAT 83 TTerm_0645 NZ_LR027880.1 262079 262104 26 262109 262133 25 4 84 3 25 74 25 77 22 0 262106 AAAAACGGAGTTGTTACAAAATAATA TATTATTTGTGACAGCTCTGTTTTT True ATGTAATAA GCAAAAAAT True True - AAAAACAGAGCTGTCACAAATAATA TTAT TATTATTTTGTAACAACTCCGTTTTT TTATTACAT 50 RIL182_RS01245 intergenic 262076 262295 + down TAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTTGCAAAAAATTTCTGGAAACAACAGTGGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGGCCTCT AATGGAAAGCATGGAAAGTATGTAATAAAAAACGGAGTTGTTACAAAATAATAATAATATTATTTGTGACAGCTCTGTTTTTGCAAAAAATTTCTGGAAACAACAGTGGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGGCCTCTTATTCGAGGTTGAATTCTACTTCGC AGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTT 216 TTerm_0646 NZ_LR027880.1 262079 262104 26 262109 262133 25 4 84 3 25 74 25 77 22 0 262106 AAAAACGGAGTTGTTACAAAATAATA TATTATTTGTGACAGCTCTGTTTTT True ATGTAATAA GCAAAAAAT True True - AAAAACAGAGCTGTCACAAATAATA TTAT TATTATTTTGTAACAACTCCGTTTTT TTATTACAT 50 RIL182_RS01250 intergenic 262076 262295 - down AGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTTTTA GCGAAGTAGAATTCAACCTCGAATAAGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTTTTATTACATACTTTCCATGCTTTCCATT AGAGGCCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCCACTGTTGTTTCCAGAAATTTTTTGCAAAAACAGAGCTGTCACAAATAATATTATTATTATTTTGTAACAACTCCGTTTT 216 TTerm_0647 NZ_LR027880.1 278332 278339 8 278349 278356 8 9 87 0 11 81 18 85 14 0 278343 TGATAAAA TTCTATCA True GCAGAAAAT GGTGATAAC True False - TGATAGAA TTTATACTT TTTTATCA ATTTTCTGC 30 RIL182_RS01285 intergenic 278334 278544 + down TAAAAAAGTATAAATTCTATCAGGTGATAACTGATTAATCATCAGGACTTTTCACGGGAAATTTATGATATAGCATATTGTCTGCTGCCGGAATCATAAGCAAATGAGAGGATACAAGAATAAATCTCAATATTTTCCACATACTAACTCCAAAGCTGATATATAAGAAAGAGCTGCTTTATCAAAATATAGCATTGGAGGATAACAACG TGCAGACTGGATGCGCAGAAAATGATAAAAAAGTATAAATTCTATCAGGTGATAACTGATTAATCATCAGGACTTTTCACGGGAAATTTATGATATAGCATATTGTCTGCTGCCGGAATCATAAGCAAATGAGAGGATACAAGAATAAATCTCAATATTTTCCACATACTAACTCCAAAGCTGATATATAAGAAAGAGCTGCTTTATCAAAATATAGCATTGGAGGATAACAACGTGAAAGCAACAGGAATTGTTCGCCG CGTTGTTATCCTCCAATGCTATATTTTGATAAAGCAGCTCTTTCTTATATATCAGCTTTGGAGTTAGTATGTGGAAAATATTGAGATTTATTCTTGTATCCTCTCATTTGCTTATGATTCCGGCAGCAGACAATATGCTATATCATAAATTTCCCGTGAAAAGTCCTGATGATTAATCAGTTATCACCTGATAGAATTTATACTTTTTTATC 212 TTerm_0648 NZ_LR027880.1 279180 279188 9 279197 279205 9 8 88 0 13 77 22 75 25 0 279192 TCATATACA TGTAAATGA True AAAAAAAAT GACAGAAAT True False - TCATTTACA GTGTCTAT TGTATATGA ATTTTTTTT 34 RIL182_RS01290 intergenic 279092 279225 + down AATAAACTCAGAGATGAGAAGAGGCGGGAAAATCAAAAAAGCAAAGATTTTCCCGCTTTTAATATACTATTGGAAAAACAAAAAAAATCATATACAATAGACACTGTAAATGAGACAGAAATGGAGCAGCTTA TTTGGGACGGCAGATGGAACAGTAAAATAAACTCAGAGATGAGAAGAGGCGGGAAAATCAAAAAAGCAAAGATTTTCCCGCTTTTAATATACTATTGGAAAAACAAAAAAAATCATATACAATAGACACTGTAAATGAGACAGAAATGGAGCAGCTTATGAAATTCATACATGTTTCGGATGT TAAGCTGCTCCATTTCTGTCTCATTTACAGTGTCTATTGTATATG 45 TTerm_0649 NZ_LR027880.1 285623 285650 28 285657 285684 28 6 82 0 31 69 30 73 26 0 285653 AAAACTAAAAAAACAGTCGTACCGCTTT AAAACGGTATGGCTGTTTTTTTGATTTT True AAACTAAAA ATGCTTCTA True True - AAAATCAAAAAAACAGCCATACCGTTTT TATTTC AAAGCGGTACGACTGTTTTTTTAGTTTT TTTTAGTTT 78 RIL182_RS01310 intergenic 285596 285683 + down TACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTT ATGCGTACAGATGCTGTTGGATTAATACATAAAAGAACTAAAAAAACTAAAAAAACTAAAAAAACAGTCGTACCGCTTTGAAATAAAAACGGTATGGCTGTTTTTTTGATTTTATGCTTCTACTGCATTCTGTTTTA AAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTT 60 TTerm_0650 NZ_LR027880.1 285623 285650 28 285657 285684 28 6 82 0 31 69 30 73 26 0 285653 AAAACTAAAAAAACAGTCGTACCGCTTT AAAACGGTATGGCTGTTTTTTTGATTTT True AAACTAAAA ATGCTTCTA True True - AAAATCAAAAAAACAGCCATACCGTTTT TATTTC AAAGCGGTACGACTGTTTTTTTAGTTTT TTTTAGTTT 78 RIL182_RS01315 intergenic 285596 285683 - down AAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTA TAAAACAGAATGCAGTAGAAGCATAAAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTTTTTTAGTTTTTTTAGTTCTTTTATGTATTAATCCAACAGCATCTGTACGCAT AAATCAAAAAAACAGCCATACCGTTTTTATTTCAAAGCGGTACGACTGTTTTTTTAGTTT 60 TTerm_0651 NZ_LR027880.1 290724 290729 6 290735 290740 6 5 100 0 12 100 0 100 0 0 290731 ATTTAA TTAAAT True AATAAAAGA TGTGCACAA True False - ATTTAA TTGTT TTAAAT TCTTTTATT 24 RIL182_RS01340 intergenic 290696 290817 - down ATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAATCTTTTATTTTGAAAGGAAACTTTTACT ATGGGGAGTATTACTTTTTTGAGTAATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAATCTTTTATTTTGAAAGGAAACTTTTACTATGAATTTTTATGATTATGAAGCAG ATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAA 93 TTerm_0652 NZ_LR027880.1 290761 290768 8 290774 290781 8 5 87 0 11 100 0 100 0 0 290770 ATAAAAAT ATTTTAAT True AATGCAAAA CCATATGTC True False - ATTAAAAT TATGT ATTTTTAT TTTTGCATT 22 RIL182_RS01340 intergenic 290696 290817 - down ATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAATCTTTTATTTTGAAAGGAAACTTTTACT ATGGGGAGTATTACTTTTTTGAGTAATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAATCTTTTATTTTGAAAGGAAACTTTTACTATGAATTTTTATGATTATGAAGCAG ATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTA 56 TTerm_0653 NZ_LR027880.1 296265 296270 6 296276 296281 6 5 100 0 12 100 0 100 0 0 296272 ATTTAA TTAAAT True AATAAAAGA TGTGCACAA True False - ATTTAA TTGTT TTAAAT TCTTTTATT 24 RIL182_RS01365 intergenic 296187 296466 + down TGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCA TGCAGAGGACACTCTTTATTTATAATGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCATGGCGATGCTGCCGGGAAAATCAGT TGGTTAGCACGCCCCAGGAGTGTCTGCAGTCGCATGTGATCGAGGATGTGTTTCAGACAAGCTGGAAAAGGTTTACGGATGAAGATGGGAGTATTACTTTTTTGAGTAATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTATTTTGCATTTGATTGTGCACAATTTAATTGTTTTAAA 201 TTerm_0654 NZ_LR027880.1 296302 296309 8 296315 296322 8 5 87 0 11 100 0 100 0 0 296311 ATAAAAAT ATTTTAAT True AATGCAAAA CCATATGTC True False - ATTAAAAT TATGT ATTTTTAT TTTTGCATT 22 RIL182_RS01365 intergenic 296187 296466 + down TGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCA TGCAGAGGACACTCTTTATTTATAATGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCATGGCGATGCTGCCGGGAAAATCAGT TGGTTAGCACGCCCCAGGAGTGTCTGCAGTCGCATGTGATCGAGGATGTGTTTCAGACAAGCTGGAAAAGGTTTACGGATGAAGATGGGAGTATTACTTTTTTGAGTAATACTCTTTTTTGTATGAATTTTTCTTGACATATGGATTAAAATTATGTATTTTTA 164 TTerm_0655 NZ_LR027880.1 296353 296362 10 296369 296378 10 6 100 0 20 70 30 70 30 0 296365 GAGTATTACT AGTAATACTC True ACAAAAAAG CCATCTTCA True False - GAGTATTACT TTTTTG AGTAATACTC CTTTTTTGT 48 RIL182_RS01365 intergenic 296187 296466 + down TGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCA TGCAGAGGACACTCTTTATTTATAATGTAAAAATCTCAAATCCTGCATCCTCTGCTTCATAATCATAAAATTCATAGTAAAAGTTTCCTTTCAAAATAAAAGATTTAAAACAATTAAATTGTGCACAATCAAATGCAAAATAAAAATACATAATTTTAATCCATATGTCAAGAAAAATTCATACAAAAAAGAGTATTACTCAAAAAAGTAATACTCCCATCTTCATCCGTAAACCTTTTCCAGCTTGTCTGAAACACATCCTCGATCACATGCGACTGCAGACACTCCTGGGGCGTGCTAACCATGGCGATGCTGCCGGGAAAATCAGT TGGTTAGCACGCCCCAGGAGTGTCTGCAGTCGCATGTGATCGAGGATGTGTTTCAGACAAGCTGGAAAAGGTTTACGGATGAAGATGGGAGTATTACTTTTTTGAGTAATACT 113 TTerm_0656 NZ_LR027880.1 328149 328162 14 328167 328180 14 4 85 0 18 42 57 41 58 0 328164 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS01585 intergenic 328150 328200 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGA ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACAGAGTATCCG TCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 51 TTerm_0657 NZ_LR027880.1 328423 328436 14 328441 328454 14 4 85 0 18 42 57 41 58 0 328438 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS01590 intergenic 328424 328489 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTAC ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGTTCCACAGTCCGGACAATAGCGGT GTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 66 TTerm_0658 NZ_LR027880.1 328423 328436 14 328441 328454 14 4 85 0 18 42 57 41 58 0 328438 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS01595 intergenic 328424 328489 - down GTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATT ACCGCTATTGTCCGGACTGTGGAACGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAAT GTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 66 TTerm_0659 NZ_LR027880.1 331058 331071 14 331076 331089 14 4 85 0 18 42 57 41 58 0 331073 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS01610 intergenic 331059 331431 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTTTAAAAAGAAAAATATAATAATTTGTAAACGAGTGGCAGACTAGCGTAAATCCAGTTTTGCTGCTCGTTTTTTTGTGCGCATGCTGTCGCACATTATGAAAATATATAACGCATTTTAAAGTGTGTAGCTTATCAGCGTAAGTCCAGCTTATGAGGTAAGTACACACTTTTTTTATGCAGAACAAGGAGGCTAAATCCTCTCCTCACCAAAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGCTAAATCCTCTCCTCGCCAAGGGGCTCGGATTTTGCTTCGCAAAACAAGGAGGATTATAAAA ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTTTAAAAAGAAAAATATAATAATTTGTAAACGAGTGGCAGACTAGCGTAAATCCAGTTTTGCTGCTCGTTTTTTTGTGCGCATGCTGTCGCACATTATGAAAATATATAACGCATTTTAAAGTGTGTAGCTTATCAGCGTAAGTCCAGCTTATGAGGTAAGTACACACTTTTTTTATGCAGAACAAGGAGGCTAAATCCTCTCCTCACCAAAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGCTAAATCCTCTCCTCGCCAAGGGGCTCGGATTTTGCTTCGCAAAACAAGGAGGATTATAAAATGGCAGAAAGTAACAAGATGAAGGA TTTTATAATCCTCCTTGTTTTGCGAAGCAAAATCCGAGCCCCTTGGCGAGGAGAGGATTTAGCCTCCTTGTTTTGCGAAGCAAAATCCGAACCCTTTGGTGAGGAGAGGATTTAGCCTCCTTGTTCTGCATAAAAAAAGTGTGTACTTACCTCATAAGCTGGACTTACGCTGATAAGCTACACACTTTAAAATGCGTTATATATTTTCATAATGTGCGACAGCATGCGCACAAAAAAACGAGCAGCAAAACTGGATTTACGCTAGTCTGCCACTCGTTTACAAATTATTATATTTTTCTTTTTAAAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 373 TTerm_0660 NZ_LR027880.1 335776 335789 14 335797 335810 14 7 78 0 13 78 21 81 18 0 335792 AAATAGAAAAAAGT ACTTCTTGCAATTT True ATCCGCAAA ATTATCTTT True False - AAATTGCAAGAAGT TTTTTCC ACTTTTTTCTATTT TTTGCGGAT 42 RIL182_RS01640 intergenic 335781 335885 + down AAAAAAGTGGAAAAAACTTCTTGCAATTTATTATCTTTACTGCTATACTCAGTTAAAACATAATATTCCTATATGACAAGTAGGAAATGAAAGGAGCGATACCG CCAGTCATCCAATCCGCAAAAATAGAAAAAAGTGGAAAAAACTTCTTGCAATTTATTATCTTTACTGCTATACTCAGTTAAAACATAATATTCCTATATGACAAGTAGGAAATGAAAGGAGCGATACCGTGAAATTTAATACATCTTTGCTGCA CGGTATCGCTCCTTTCATTTCCTACTTGTCATATAGGAATATTATGTTTTAACTGAGTATAGCAGTAAAGATAATAAATTGCAAGAAGTTTTTTCCACTTTTTTCTATT 109 TTerm_0661 NZ_LR027880.1 340393 340416 24 340422 340445 24 5 70 0 13 81 18 88 11 0 340418 AAAAAAAGTGTAAAAGGAGAAAAA TTTTACACTTTTTTGATTTCTTTT True CATAGACGA AATGGAAAT True True - AAAAGAAATCAAAAAAGTGTAAAA GAATT TTTTTCTCCTTTTACACTTTTTTT TCGTCTATG 34 RIL182_RS01675 intergenic 340367 340501 + down AACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTTAATGGAAATTCCAGTTCTTTAAACAATAAAATCTGTTGCAGCCGTTCTTTTCAGGT AGAAGAGCTTGTGATCGAAGCGTAAAACTTTAAAAATAAAATCATAGACGAAAAAAAGTGTAAAAGGAGAAAAAAATTCTTTTACACTTTTTTGATTTCTTTTAATGGAAATTCCAGTTCTTTAAACAATAAAATCTGTTGCAGCCGTTCTTTTCAGGTCATATCCGAAGACCCATTAAAATAT ACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTT 108 TTerm_0662 NZ_LR027880.1 340393 340416 24 340422 340445 24 5 70 0 13 81 18 88 11 0 340418 AAAAAAAGTGTAAAAGGAGAAAAA TTTTACACTTTTTTGATTTCTTTT True CATAGACGA AATGGAAAT True True - AAAAGAAATCAAAAAAGTGTAAAA GAATT TTTTTCTCCTTTTACACTTTTTTT TCGTCTATG 34 RIL182_RS21535 intergenic 340367 340501 - down ACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTTTCGTCTATGATTTTATTTTTAAAGTT ATATTTTAATGGGTCTTCGGATATGACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTTTCGTCTATGATTTTATTTTTAAAGTTTTACGCTTCGATCACAAGCTCTTCT ACCTGAAAAGAACGGCTGCAACAGATTTTATTGTTTAAAGAACTGGAATTTCCATTAAAAGAAATCAAAAAAGTGTAAAAGAATTTTTTTCTCCTTTTACACTTTTTT 108 TTerm_0663 NZ_LR027880.1 341207 341214 8 341224 341231 8 9 87 0 11 68 31 71 28 0 341218 ACTCAAAA TTTTGGGT True GAAAAATCA ATAAACAGC True False - ACCCAAAA ATATGGGGA TTTTGAGT TGATTTTTC 38 RIL182_RS01685 intergenic 340989 341288 - down AAAATCGATCATGGATTTTTGTCGATTGGGTATATACAGAAAAAATCTGCTGTTTATACCCAAAAATATGGGGATTTTGAGTGATTTTTCACTGATATTGGGCATAGCAGATCAGTTTCTTTCATTATATACCCAAAACACGGGAAAATCAGGGGTTCTTGTGGGTATACAGCTACAATTTCTTTGCTATATGCCCAATCTGCGATGTTTCAATATCTTATGATGTCAGATACACTTTGACAGTCATCATATTGTATAAAACTATTGAACCACAATATTATAATGGAGGATCTATGAAC ATGTCCAGCGGTCATTGTTTGAGTAAAAATCGATCATGGATTTTTGTCGATTGGGTATATACAGAAAAAATCTGCTGTTTATACCCAAAAATATGGGGATTTTGAGTGATTTTTCACTGATATTGGGCATAGCAGATCAGTTTCTTTCATTATATACCCAAAACACGGGAAAATCAGGGGTTCTTGTGGGTATACAGCTACAATTTCTTTGCTATATGCCCAATCTGCGATGTTTCAATATCTTATGATGTCAGATACACTTTGACAGTCATCATATTGTATAAAACTATTGAACCACAATATTATAATGGAGGATCTATGAACATGAATATAAATATAAATTCGTTAT AAAATCGATCATGGATTTTTGTCGATTGGGTATATACAGAAAAAATCTGCTGTTTATACCCAAAAATATGGGGATTTTGAG 81 TTerm_0664 NZ_LR027880.1 350969 350986 18 350994 351011 18 7 72 0 11 61 38 61 38 0 350989 TAAGATTTTTCACACGCA TGCTTGCGCACAAACTTA True GTGAAAAAT AGATGCGCA True False - TAAGTTTGTGCGCAAGCA CAAATCC TGCGTGTGAAAAATCTTA ATTTTTCAC 46 RIL182_RS01730 intergenic 350742 351047 + down AGGGTTTGGACAAAGTTATGGATATTATATAGATATTTATGGATGTTTTTCGGAAACGGGAGGCATCCTTTTTCTTTATAGAAGAATGCCAGGGCAGATAGTGCTTTTCAATTTTCTGATAACACAGTCATGATATATTTTCTCAAATAAATGTTGTAATTACAACATACAATCTGACCGAAATAAATTAATATGATACCAGAGACAAGGACATCAGTGTGAAAAATAAGATTTTTCACACGCAGGATTTGTGCTTGCGCACAAACTTAAGATGCGCAAAAGCAGCGCAAGAATGGAGGTTTTCA ATACGGGGAGAATGAAGAATCGTAGAGGGTTTGGACAAAGTTATGGATATTATATAGATATTTATGGATGTTTTTCGGAAACGGGAGGCATCCTTTTTCTTTATAGAAGAATGCCAGGGCAGATAGTGCTTTTCAATTTTCTGATAACACAGTCATGATATATTTTCTCAAATAAATGTTGTAATTACAACATACAATCTGACCGAAATAAATTAATATGATACCAGAGACAAGGACATCAGTGTGAAAAATAAGATTTTTCACACGCAGGATTTGTGCTTGCGCACAAACTTAAGATGCGCAAAAGCAGCGCAAGAATGGAGGTTTTCATGAAACAGTTAGAATTAAACAACAG TGAAAACCTCCATTCTTGCGCTGCTTTTGCGCATCTTAAGTTTGTGCGCAAGCACAAATCCTGCGTGTGAAAAATCTT 78 TTerm_0665 NZ_LR027880.1 354971 354983 13 354991 355003 13 7 92 0 21 50 50 50 50 0 354986 AAAATGCAGGTGC GCGCCTGCATTTT True AAAAGTTTA TTAATGCCA True True - AAAATGCAGGCGC CCCATCT GCACCTGCATTTT TAAACTTTT 82 RIL182_RS01770 intergenic 354957 355077 + down AAAATAAAAGTTTAAAATGCAGGTGCAGATGGGGCGCCTGCATTTTTTAATGCCAGATGATTGTTCATCAAAACGGACTGTGTTATAGTAATAAAAAATATCACAAGGGGGGAATTCGGG AATTATTATTTATCGGTTTTTATAAAAAATAAAAGTTTAAAATGCAGGTGCAGATGGGGCGCCTGCATTTTTTAATGCCAGATGATTGTTCATCAAAACGGACTGTGTTATAGTAATAAAAAATATCACAAGGGGGGAATTCGGGTGAAAAAATTATTATTAAAGAATGC CCCGAATTCCCCCCTTGTGATATTTTTTATTACTATAACACAGTCCGTTTTGATGAACAATCATCTGGCATTAAAAAATGCAGGCGCCCCATCTGCACCTGCATTT 106 TTerm_0666 NZ_LR027880.1 361655 361672 18 361677 361694 18 4 88 0 26 61 38 56 43 0 361674 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True - AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT TCTTTTGTT 68 RIL182_RS01810 intergenic 361596 361698 + down AGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTTTTCT TGTCTGCGTGTTGATTAGACAATAAAGAGTGGGATGAGAGATTGAACTAAGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGTTTTCTTATGCAAATATTTCTGCAATCTCGC AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGT 43 TTerm_0667 NZ_LR027880.1 361655 361672 18 361677 361694 18 4 88 0 26 61 38 56 43 0 361674 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True - AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT TCTTTTGTT 68 RIL182_RS01815 intergenic 361596 361698 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCTTAGTTCAATCTCTCATCCCACTCT GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCTTAGTTCAATCTCTCATCCCACTCTTTATTGTCTAATCAACACGCAGACA AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGT 43 TTerm_0668 NZ_LR027880.1 379025 379036 12 379042 379053 12 5 83 0 14 75 25 70 30 0 379038 TTCATATATACC GGTAAAAATGAA True GCAAAATTT TCGTGATTG True False - TTCATTTTTACC TTTTG GGTATATATGAA AAATTTTGC 44 RIL182_RS01885 intergenic 378774 379096 + down AGACTGCTGTTTCACTTAATCATAGAGTGTTCGCAGAACGTGTATTTTATGGTTGGAAATATGGAAGATTTTCTTAATTTAGACGAAGGTTTAACAAAAACAAAATGAGATAAGATATAATAAGACTGCCGAGCGAAGCGAGTATAAGGCATATAGCATGAAAAACTATCTGTGTATGTCCATTATCACAAAAAAATCCTCAAAAAACGCGGATTTAAGGGAAAATTATGGGTATTTTCCGAGCAAAATTTTCATATATACCCAAAAGGTAAAAATGAATCGTGATTGAAAGGAAAAATGATGGAAAAGAGGAGGCAAAATA CGGGGGAGATATGGATGAACTGTGAAGACTGCTGTTTCACTTAATCATAGAGTGTTCGCAGAACGTGTATTTTATGGTTGGAAATATGGAAGATTTTCTTAATTTAGACGAAGGTTTAACAAAAACAAAATGAGATAAGATATAATAAGACTGCCGAGCGAAGCGAGTATAAGGCATATAGCATGAAAAACTATCTGTGTATGTCCATTATCACAAAAAAATCCTCAAAAAACGCGGATTTAAGGGAAAATTATGGGTATTTTCCGAGCAAAATTTTCATATATACCCAAAAGGTAAAAATGAATCGTGATTGAAAGGAAAAATGATGGAAAAGAGGAGGCAAAATATGAAACGAACAAGTGTAACACGGGA TATTTTGCCTCCTCTTTTCCATCATTTTTCCTTTCAATCACGATTCATTTTTACCTTTTGGGTATATATGA 71 TTerm_0669 NZ_LR027880.1 386026 386048 23 386054 386077 24 5 91 4 31 55 44 54 45 0 386050 AAAAACAAGAGGTGCTTCCGGAA TTCCGGTGAGCACCTCTTGTTTTT True ATAAATAAA GTGATAACA True True - AAAAACAAGAGGTGCTCACCGGAA CAGAT TTCCGGAAGCACCTCTTGTTTTT TTTATTTAT 94 RIL182_RS01920 intergenic 386025 386160 + down AAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTTGTGATAACAGATCTGTTTAAAATATGCACAGATTGTTGTTTGTGAAAATGATGTACTAATATATAGATGTATATATATCAGGT ACAGTTCCGCAGACAGTATAAATAAAAAAACAAGAGGTGCTTCCGGAAATCTGTTCCGGTGAGCACCTCTTGTTTTTGTGATAACAGATCTGTTTAAAATATGCACAGATTGTTGTTTGTGAAAATGATGTACTAATATATAGATGTATATATATCAGGTTATTTAATATGTTTTTTGATCGCAT ACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTT 134 TTerm_0670 NZ_LR027880.1 386026 386048 23 386054 386077 24 5 91 4 31 55 44 54 45 0 386050 AAAAACAAGAGGTGCTTCCGGAA TTCCGGTGAGCACCTCTTGTTTTT True ATAAATAAA GTGATAACA True True - AAAAACAAGAGGTGCTCACCGGAA CAGAT TTCCGGAAGCACCTCTTGTTTTT TTTATTTAT 94 RIL182_RS01925 intergenic 386025 386160 - down ACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTTT ATGCGATCAAAAAACATATTAAATAACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTTTTTATTTATACTGTCTGCGGAACTGT ACCTGATATATATACATCTATATATTAGTACATCATTTTCACAAACAACAATCTGTGCATATTTTAAACAGATCTGTTATCACAAAAACAAGAGGTGCTCACCGGAACAGATTTCCGGAAGCACCTCTTGTTTT 134 TTerm_0671 NZ_LR027880.1 388211 388219 9 388226 388234 9 6 88 0 13 83 16 87 12 0 388222 AGAATAAAT ATGTATTCT True GAAGAAAAA GGTATAAAA True False - AGAATACAT ATTCTG ATTTATTCT TTTTTCTTC 34 RIL182_RS01930 intergenic 388217 388254 + down ATCAGAATATGTATTCTGGTATAAAAAACTGGGGGAC ACCGGAAGAGGAAGAAAAAGAATAAATCAGAATATGTATTCTGGTATAAAAAACTGGGGGACTAGAACCCCAGTTTTTTTAATTCCT GTCCCCCAGTTTTTTATACCAGAATACATATTCTGATTTATTC 43 TTerm_0672 NZ_LR027880.1 388211 388219 9 388226 388234 9 6 88 0 13 83 16 87 12 0 388222 AGAATAAAT ATGTATTCT True GAAGAAAAA GGTATAAAA True False - AGAATACAT ATTCTG ATTTATTCT TTTTTCTTC 34 RIL182_RS01935 intergenic 388217 388254 - down GTCCCCCAGTTTTTTATACCAGAATACATATTCTGAT AGGAATTAAAAAAACTGGGGTTCTAGTCCCCCAGTTTTTTATACCAGAATACATATTCTGATTTATTCTTTTTCTTCCTCTTCCGGT GTCCCCCAGTTTTTTATACCAGAATACATATTCTGATTTATTC 43 TTerm_0673 NZ_LR027880.1 393731 393743 13 393752 393764 13 8 92 0 21 65 34 66 33 0 393747 AAAAAGTGTCACA TGTGGCACTTTTT True AACAGGCAA ATTTTGTGG True True - AAAAAGTGCCACA CCATACGA TGTGACACTTTTT TTGCCTGTT 74 RIL182_RS01955 intergenic 393666 393854 + down AGAAAGCGTATCGCCTGAAAAACAGGTAATAGCCTTAAAAATAAATCATAGACAAAAACAGGCAAAAAAGTGTCACATCGTATGGTGTGGCACTTTTTATTTTGTGGCAAGTGTGCTAAAATTACATTTAATACATTATAATCTTTTAACATAAAAGAAATCATTATGGCATAAAGTGAGGACACAGA CTCCACAGCATTATTCGCAGACTAAAGAAAGCGTATCGCCTGAAAAACAGGTAATAGCCTTAAAAATAAATCATAGACAAAAACAGGCAAAAAAGTGTCACATCGTATGGTGTGGCACTTTTTATTTTGTGGCAAGTGTGCTAAAATTACATTTAATACATTATAATCTTTTAACATAAAAGAAATCATTATGGCATAAAGTGAGGACACAGATGGAAGCGAAAAGACAGGATATCGG TCTGTGTCCTCACTTTATGCCATAATGATTTCTTTTATGTTAAAAGATTATAATGTATTAAATGTAATTTTAGCACACTTGCCACAAAATAAAAAGTGCCACACCATACGATGTGACACTTTT 123 TTerm_0674 NZ_LR027880.1 402564 402570 7 402575 402581 7 4 100 0 14 57 42 57 42 0 402572 GATATCC GGATATC True AAAAATTAG AGAAACGGA True False - GATATCC GGCA GGATATC CTAATTTTT 44 RIL182_RS01980 intergenic 402241 402785 + down AATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCA TGGACTTATTTATATGCTGCAGTAAAATTTGGTCTGAAAAACAGTATTGACATTTTAAGAAAGCGTGTTATACTCAGACACATAAAAATAGAATATGATCTTCAGGGCAGGGTGTGATTCCCTACCGGTGGTATAGCCCACGAGCCGTAAGGCATGATTCGGTGTAATTCCGAAGCCGACAGTATAGTCTGGATGAAAGAAGATATGGATAAGCAGGATTTAAAGGATCGTTTTAAACGGTTGGTAAGATAATGCATACATGGCTCTGAAATAGTTTTATTTCAGAGTCTTTTTATTTGTGACAATAGAATGTTCGCGGAGCGCGTATTTTATTGCTGCAAAAATTAGATATCCTGCCGGATATCAGAAACGGAAAAAAGTTTCGCATGGTATCCCGGTTTTTAAAATATGTCATTTTAGAAATCCCTAAAATCCGGTTTTAAGAAGCTCTGAACGATCGTGTTCAGAGCTTCTTTTTATGGCAATAGAATATTCCCGGAGCGTGTATTCTATCGTCATGAAGCAACAGAGATTGCAGATTTTATCTTGCAGGAAAGGGAAGGTATTCATGCAGCAGGAAAGATATATGCGCCG TGAATACCTTCCCTTTCCTGCAAGATAAAATCTGCAATCTCTGTTGCTTCATGACGATAGAATACACGCTCCGGGAATATTCTATTGCCATAAAAAGAAGCTCTGAACACGATCGTTCAGAGCTTCTTAAAACCGGATTTTAGGGATTTCTAAAATGACATATTTTAAAAACCGGGATACCATGCGAAACTTTTTTCCGTTTCTGATATCCGGCAGGATAT 221 TTerm_0675 NZ_LR027880.1 408143 408150 8 408158 408165 8 7 87 0 11 68 31 71 28 0 408153 AGTAACAA TTGTTGCT True CCAAAAAGA TACATTATA True False - AGCAACAA TCGGAGT TTGTTACT TCTTTTTGG 38 RIL182_RS02015 intergenic 408121 408277 - down AATTTATCGTGCAAAAAATATAGTAAGATGAATTGTCTGACAGGTAAGCGATCTCTTTCACTTTCATCACAACATCCCACTGTCCTTAGAGAGATGGACGAAGTATAATGTAAGCAACAATCGGAGTTTGTTACTCTTTTTGGAGGTGAATTGGTA CGATTGCAGAGATATTAAATCAGTAAATTTATCGTGCAAAAAATATAGTAAGATGAATTGTCTGACAGGTAAGCGATCTCTTTCACTTTCATCACAACATCCCACTGTCCTTAGAGAGATGGACGAAGTATAATGTAAGCAACAATCGGAGTTTGTTACTCTTTTTGGAGGTGAATTGGTAATGATAAAATTAAAAATGTCTATTG AATTTATCGTGCAAAAAATATAGTAAGATGAATTGTCTGACAGGTAAGCGATCTCTTTCACTTTCATCACAACATCCCACTGTCCTTAGAGAGATGGACGAAGTATAATGTAAGCAACAATCGGAGTTTGTTAC 134 TTerm_0676 NZ_LR027880.1 425440 425455 16 425462 425478 17 6 88 5 17 57 42 60 40 0 425458 AAAAGAACAGGTTTCC GGAAACGCTGTCCTTTT True GTAAAATAA CTATGCTAT True True - AAAAGGACAGCGTTTCC ACCTCA GGAAACCTGTTCTTTT TTATTTTAC 58 RIL182_RS02095 intergenic 425435 425602 + down AATAAAAAGAACAGGTTTCCTGAGGTGGAAACGCTGTCCTTTTCTATGCTATAAATGTGTGTGTGTATATAGCAATTAAAATGTATCATGGATTTGATATAACTTCAAATAGGATAAAATTATAGAAAACATAAGTAAATACTTATGAGAGAAACGGAGATATGATA TGATACGAACACGCTGTTGCTGTAAAATAAAAAGAACAGGTTTCCTGAGGTGGAAACGCTGTCCTTTTCTATGCTATAAATGTGTGTGTGTATATAGCAATTAAAATGTATCATGGATTTGATATAACTTCAAATAGGATAAAATTATAGAAAACATAAGTAAATACTTATGAGAGAAACGGAGATATGATATGAACCTGTTAGACATCATCGGACC TATCATATCTCCGTTTCTCTCATAAGTATTTACTTATGTTTTCTATAATTTTATCCTATTTGAAGTTATATCAAATCCATGATACATTTTAATTGCTATATACACACACACATTTATAGCATAGAAAAGGACAGCGTTTCCACCTCAGGAAACCTGTTCTTT 162 TTerm_0677 NZ_LR027880.1 430348 430364 17 430374 430390 17 9 94 0 29 50 50 50 50 0 430368 AAGAAAAGGCAGAGCCG CGGTTCTGCCTTTTCTT True TAAAATATA TATGCATAA True True - AAGAAAAGGCAGAACCG CTTCATCCC CGGCTCTGCCTTTTCTT TATATTTTA 90 RIL182_RS02125 intergenic 430214 430426 + down GAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTTTATGCATAATTTATGCATGCATAGATTATGTGCAAT GAAAAAACAGAGTGTAACGGTGTGAGAATGTCAGAACTGGAAAGATAACAGAATGGGTGAAATGCCGGTGTGAAAAATAGAAAGCAACAGTATAGGGAATGCCAGAGATGGAAAGATAGCAAAAAGCTGGACTGTGTGAAAAAATGAGTATAAAATATAAGAAAAGGCAGAGCCGGGGATGAAGCGGTTCTGCCTTTTCTTTATGCATAATTTATGCATGCATAGATTATGTGCAATTAGTATTTGTTGCTGCGTCTCCAGA ATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCT 78 TTerm_0678 NZ_LR027880.1 430348 430364 17 430374 430390 17 9 94 0 29 50 50 50 50 0 430368 AAGAAAAGGCAGAGCCG CGGTTCTGCCTTTTCTT True TAAAATATA TATGCATAA True True - AAGAAAAGGCAGAACCG CTTCATCCC CGGCTCTGCCTTTTCTT TATATTTTA 90 RIL182_RS02130 intergenic 430214 430426 - down ATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCTTATATTTTATACTCATTTTTTCACACAGTCCAGCTTTTTGCTATCTTTCCATCTCTGGCATTCCCTATACTGTTGCTTTCTATTTTTCACACCGGCATTTCACCCATTCTGTTATCTTTCCAGTTCTGACATTC TCTGGAGACGCAGCAACAAATACTAATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCTTATATTTTATACTCATTTTTTCACACAGTCCAGCTTTTTGCTATCTTTCCATCTCTGGCATTCCCTATACTGTTGCTTTCTATTTTTCACACCGGCATTTCACCCATTCTGTTATCTTTCCAGTTCTGACATTCTCACACCGTTACACTCTGTTTTTTC ATTGCACATAATCTATGCATGCATAAATTATGCATAAAGAAAAGGCAGAACCGCTTCATCCCCGGCTCTGCCTTTTCT 78 TTerm_0679 NZ_LR027880.1 463269 463289 21 463295 463316 22 5 90 4 27 41 58 40 60 0 463291 AGATAACGGGAGCAGATCCGC GCGGAACTCGCTCCCGTTATCT True ACACAAAAA AATATCATC True False - AGATAACGGGAGCGAGTTCCGC ACTCG GCGGATCTGCTCCCGTTATCT TTTTTGTGT 86 RIL182_RS02265 intergenic 463248 463340 + down GATAACAGACTGACACAAAAAGATAACGGGAGCAGATCCGCCGAGTGCGGAACTCGCTCCCGTTATCTAATATCATCAAGGAGGTGGTCAAA AATCTTGACTCTTATCACAGGCTAAGATAACAGACTGACACAAAAAGATAACGGGAGCAGATCCGCCGAGTGCGGAACTCGCTCCCGTTATCTAATATCATCAAGGAGGTGGTCAAATGTCTGATAACTGGGTGGTACAGAA TTTGACCACCTCCTTGATGATATTAGATAACGGGAGCGAGTTCCGCACTCGGCGGATCTGCTCCCGTTATC 71 TTerm_0680 NZ_LR027880.1 478131 478136 6 478142 478147 6 5 100 0 12 33 66 33 66 0 478138 ATCGGG CCCGAT True CTCAAAATA TTCGCCATA True False - ATCGGG AGCTG CCCGAT TATTTTGAG 56 RIL182_RS02340 intergenic 477897 478483 + down AGGGGAAAATTGAATATTCCCACGGGCTACAGGGTGAGAGGACAAAAAACTCTTGCCCTGTTTTCCTTTGTGTGGCGAAAACGGGATTGCTCCTTGATAAATGAATACCCATTCGCCAAATACTTTCTCTTTGTGATTGTGATGAGCATAAGCGTGTGCAGCGGTACGCCACGACCTGTCAAAAGGCAGCGAGCGATTGAAAGGTGGTGAGACTATCTTTACCGACTCAAAATATCGGGCAGCTCCCGATTTCGCCATAACCCACAAAGAGGATAATGATACTCCCGTCCAGTCACAGTCCGAGCGTGAAAAAACCGTCGCAGGCAATGAGGGCGGCTCTGTCAGAACGACAGTTGGGGTGGAACTCCCGTGGCGTCAGTTCGCTGCTGACCGTTTGGCGACTTCCCATAGCATTTCGGGGTGTCGAGGACAAATTGAAATGCTTCTATCATATCAGCCAAACGAAAGGCGGTCATAAGAACAGAGATATTGATAATATTCTTCCGACCTTAAAAACTTCCTTTTGTTTGGCTGCCTACATAGGCAGAACTCATCTGCCTAAATCCAGATGGGAGGTCAAACACAA TTGTGTTTGACCTCCCATCTGGATTTAGGCAGATGAGTTCTGCCTATGTAGGCAGCCAAACAAAAGGAAGTTTTTAAGGTCGGAAGAATATTATCAATATCTCTGTTCTTATGACCGCCTTTCGTTTGGCTGATATGATAGAAGCATTTCAATTTGTCCTCGACACCCCGAAATGCTATGGGAAGTCGCCAAACGGTCAGCAGCGAACTGACGCCACGGGAGTTCCACCCCAACTGTCGTTCTGACAGAGCCGCCCTCATTGCCTGCGACGGTTTTTTCACGCTCGGACTGTGACTGGACGGGAGTATCATTATCCTCTTTGTGGGTTATGGCGAAATCGGGAGCTGCCCGA 352 TTerm_0681 NZ_LR027880.1 478891 478904 14 478910 478923 14 5 85 0 18 50 50 50 50 0 478906 CGGCTGTATTTCTA TAGAGGTACAGCCG True TAAAATGGC TTTTAGCTT True True - CGGCTGTACCTCTA AATTA TAGAAATACAGCCG GCCATTTTA 60 RIL182_RS02355 intergenic 478839 478951 + down AAAAATGTGTAAAGCAGGTATGCGGGATAGATTTGCACATTGGTAAAATGGCGGCTGTATTTCTATAATTTAGAGGTACAGCCGTTTTAGCTTTAGCGGAGGTATTCGTTTA TAGTGTTGCACTTAAAAAAATATGAAAAAATGTGTAAAGCAGGTATGCGGGATAGATTTGCACATTGGTAAAATGGCGGCTGTATTTCTATAATTTAGAGGTACAGCCGTTTTAGCTTTAGCGGAGGTATTCGTTTATGGGAAATGAAAATTTAATTCAAAA TAAACGAATACCTCCGCTAAAGCTAAAACGGCTGTACCTCTAAATTATAGAAATACAGCC 60 TTerm_0682 NZ_LR027880.1 534520 534536 17 534542 534557 16 5 82 5 12 90 9 100 0 0 534538 AAATATAGTATGTTTTA TAAAAATATTGTATTT True AACTATAAA ATGAGACTT True False - AAATACAATATTTTTA CCACA TAAAACATACTATATTT TTTATAGTT 24 RIL182_RS02680 intergenic 534492 534619 + down GATATATATACAAGTATGAAACTATAAAAATATAGTATGTTTTATGTGGTAAAAATATTGTATTTATGAGACTTTTGGTATTTCACAAATACCTAAGAAAAAATAAAGTAGAGGAGAGTGTATATTA AGGCAGATATTATATGTTTGCATAAGATATATATACAAGTATGAAACTATAAAAATATAGTATGTTTTATGTGGTAAAAATATTGTATTTATGAGACTTTTGGTATTTCACAAATACCTAAGAAAAAATAAAGTAGAGGAGAGTGTATATTATGAATATTGATTACAGTCAGTTTTA TAATATACACTCTCCTCTACTTTATTTTTTCTTAGGTATTTGTGAAATACCAAAAGTCTCATAAATACAATATTTTTACCACATAAAACATACTATATT 99 TTerm_0683 NZ_LR027880.1 546960 546983 24 546990 547013 24 6 83 0 28 62 37 70 30 0 546986 TTTATGGTAAGAATAAAATGCCCG CGGGCGTTTTATTGTTGGCATAAA True CCTGCCAGT ATAGGAAAG True True - TTTATGCCAACAATAAAACGCCCG GATCAT CGGGCATTTTATTCTTACCATAAA ACTGGCAGG 104 RIL182_RS02745 intergenic 546909 547115 + down GGCTGCGGCAGGAATGGCAGCAAGTAAATAGGAAACGTTGTTCCTGCCAGTTTATGGTAAGAATAAAATGCCCGATGATCCGGGCGTTTTATTGTTGGCATAAAATAGGAAAGGACAGCAGAAAGCATATAACGGAAAATGAGTAAAAGAAAGTGGATATAAAAAAAGCACATGAAGTAAGTGTGCGACAGGAGGAGAAAAGCGTA GGAACAGGAGATTCGATATGAGTAAGGCTGCGGCAGGAATGGCAGCAAGTAAATAGGAAACGTTGTTCCTGCCAGTTTATGGTAAGAATAAAATGCCCGATGATCCGGGCGTTTTATTGTTGGCATAAAATAGGAAAGGACAGCAGAAAGCATATAACGGAAAATGAGTAAAAGAAAGTGGATATAAAAAAAGCACATGAAGTAAGTGTGCGACAGGAGGAGAAAAGCGTATGAATTATGAGCAACTGATAGAAGA TACGCTTTTCTCCTCCTGTCGCACACTTACTTCATGTGCTTTTTTTATATCCACTTTCTTTTACTCATTTTCCGTTATATGCTTTCTGCTGTCCTTTCCTATTTTATGCCAACAATAAAACGCCCGGATCATCGGGCATTTTATTCTTACCATAA 155 TTerm_0684 NZ_LR027880.1 558290 558309 20 558316 558335 20 6 85 0 25 62 37 64 35 0 558312 AGGAAAAGAGAACTGTGAGA TCTCACGGTTCTTTTTTACT True TAACGTATA TGACAAGTG True True - AGTAAAAAAGAACCGTGAGA TTATTT TCTCACAGTTCTCTTTTCCT TATACGTTA 74 RIL182_RS02805 intergenic 558154 558426 + down GCGTATAAAAAAATCTGAAACTGAAAAAAGGCTCCAAATACTGTCTGATGGATTCGAAATATTATCCGACGGAGCGTGATACATGGGTAACAAGGTCGAAAGTATACAAGTTTACAGCAAAATAAAATAACGTATAGGAAAAGAGAACTGTGAGAAAATAATCTCACGGTTCTTTTTTACTTGACAAGTGATGGTATCTTCCTGTATGATAAAAAGCGTAAAGATTGCACACAATTAAATTTAAAACAATGATTTTGAGATGGAGAGAAAAA GATATTGAAAGAGGGAGAAGTGTGAGCGTATAAAAAAATCTGAAACTGAAAAAAGGCTCCAAATACTGTCTGATGGATTCGAAATATTATCCGACGGAGCGTGATACATGGGTAACAAGGTCGAAAGTATACAAGTTTACAGCAAAATAAAATAACGTATAGGAAAAGAGAACTGTGAGAAAATAATCTCACGGTTCTTTTTTACTTGACAAGTGATGGTATCTTCCTGTATGATAAAAAGCGTAAAGATTGCACACAATTAAATTTAAAACAATGATTTTGAGATGGAGAGAAAAATGGAGAGAGCAGACATAGCGATTAT TTTTTCTCTCCATCTCAAAATCATTGTTTTAAATTTAATTGTGTGCAATCTTTACGCTTTTTATCATACAGGAAGATACCATCACTTGTCAAGTAAAAAAGAACCGTGAGATTATTTTCTCACAGTTCTCTTTTCC 136 TTerm_0685 NZ_LR027880.1 569170 569175 6 569182 569187 6 6 100 0 12 83 16 83 16 0 569178 AAAGTT AACTTT True ATAAAAACA TTGGGAAAA True False - AAAGTT TTCATG AACTTT TGTTTTTAT 32 RIL182_RS02850 intergenic 569131 569216 + down TTATGTTATAAAGTGCAGATTGCATTTTATATAAAAACAAAGTTCATGAAAACTTTTTGGGAAAAAGAAAAGGAGAGGAAAAAAA GCTTGCGTCGGTTTATCACAGATAATTATGTTATAAAGTGCAGATTGCATTTTATATAAAAACAAAGTTCATGAAAACTTTTTGGGAAAAAGAAAAGGAGAGGAAAAAAATGAAAAAGAAAGCAGTGTCATTATT TTTTTTTCCTCTCCTTTTCTTTTTCCCAAAAAGTTTTCATGAACTT 46 TTerm_0686 NZ_LR027880.1 570557 570563 7 570570 570576 7 6 100 0 14 71 28 71 28 0 570566 GATTTCT AGAAATC True AGTAAAAAG CCAGGGTGC True False - GATTTCT ATCAGA AGAAATC CTTTTTACT 36 RIL182_RS02855 intergenic 570553 570654 + down AAAGATTTCTTCTGATAGAAATCCCAGGGTGCCCGGACGGGCATCCTGGATGTTTCTACATTGAGATTTAAAGGAGGCCCATAACGTGAAAAAGGCTGGAA AATGAACACAGACATTGCACAGTAAAAAGATTTCTTCTGATAGAAATCCCAGGGTGCCCGGACGGGCATCCTGGATGTTTCTACATTGAGATTTAAAGGAGGCCCATAACGTGAAAAAGGCTGGAATGAAAAAAGGAAAAAATAAAGAATT TTCCAGCCTTTTTCACGTTATGGGCCTCCTTTAAATCTCAATGTAGAAACATCCAGGATGCCCGTCCGGGCACCCTGGGATTTCTATCAGAAGAAAT 97 TTerm_0687 NZ_LR027880.1 586970 586986 17 586992 587009 18 5 94 5 24 48 51 47 52 0 586988 AAAAAGCTGACTGCCGG CCGGCAAGTCAGCTTTTT True TATTATTAA GGTTTGCGC True True - AAAAAGCTGACTTGCCGG TTTGC CCGGCAGTCAGCTTTTT TTAATAATA 88 RIL182_RS02945 intergenic 586929 587493 + down ATAACAGAATGCACGTTCTACGAACATTTTATTATTATTAAAAAAGCTGACTGCCGGGCAAACCGGCAAGTCAGCTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCA TGCGTTCTTTCCTTTCCGTCCCGCTTGATTTGACCATCTTTTACCCGATTGGTTACGGCAGATGTTATCTCTTCTGCAATACGAGACATACTCAAACTTATTGATTGTTCGCCCCTTTGCTCTATCTCCATTACAGAGACTTCTTCACTACTATGGGCTCGGCTGACTTCTCACAGTTCGTTGTTACTAGGCTAATGAAACCCCTGTGAGACCTCCACGCTTAAGGTGCACGCTCTTTCCTCTCATCTATCCGCCACATCTACTCGTACTTCCAGCAACTTTAGGACTTCATCTCTTTTGGCAGACTTATCCGTATTTCCGAGCCTTATATGTGATTTCTGTCCGTCGGACCAAGAGTTTGCTTACAGCTTCCTTCAGATTCCACCTCACGATGGACACCCTTGCTGTTCTGCTATACACTTCCTCGTTGCCTAGGCGTGTTCGGGACTTTCACCCATTAGAGCGCGCCCATGGCGCGCAAACCAAAAAGCTGACTTGCCGGTTTGCCCGGCAGTCAGCTTTT 523 TTerm_0688 NZ_LR027880.1 606873 606890 18 606895 606912 18 4 94 0 31 52 47 52 47 0 606892 ACAGTAAAAACCCCGAAG CTTCGGGGTTTTTGCTGT True ATACATCAA CTATATAGG True True - ACAGCAAAAACCCCGAAG TCAC CTTCGGGGTTTTTACTGT TTGATGTAT 94 RIL182_RS03020 intergenic 606809 607024 + down TATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGTCTATATAGGAAAATCAATGGCTGAGAGATTTTTTTGCGTGTGAAAAATTCGCTTGTATGAAACTAAAAAAAATGAAGTGTCTGGGAATTTTCTGGGAGTTTTTTATAATTCT TTTCGTATCCAGAGAGTTACATTAATATGCACTAATCTAATTTGATTAGATTGGTGAAATCTAATCCCCTTAGTTAGTATATACATCAACAGTAAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGTCTATATAGGAAAATCAATGGCTGAGAGATTTTTTTGCGTGTGAAAAATTCGCTTGTATGAAACTAAAAAAAATGAAGTGTCTGGGAATTTTCTGGGAGTTTTTTATAATTCTTATTTCCAGTAACGGGAATTTTGAA AGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTG 151 TTerm_0689 NZ_LR027880.1 606873 606890 18 606895 606912 18 4 94 0 31 52 47 52 47 0 606892 ACAGTAAAAACCCCGAAG CTTCGGGGTTTTTGCTGT True ATACATCAA CTATATAGG True True - ACAGCAAAAACCCCGAAG TCAC CTTCGGGGTTTTTACTGT TTGATGTAT 94 RIL182_RS03025 intergenic 606809 607024 - down AGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTGTTGATGTATATACTAACTAAGGGGATTAGATTTCACCAATCTAATCAAATTAGATTAGTGCATA TTCAAAATTCCCGTTACTGGAAATAAGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTGTTGATGTATATACTAACTAAGGGGATTAGATTTCACCAATCTAATCAAATTAGATTAGTGCATATTAATGTAACTCTCTGGATACGAAA AGAATTATAAAAAACTCCCAGAAAATTCCCAGACACTTCATTTTTTTTAGTTTCATACAAGCGAATTTTTCACACGCAAAAAAATCTCTCAGCCATTGATTTTCCTATATAGACAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTTACTG 151 TTerm_0690 NZ_LR027880.1 609362 609373 12 609378 609389 12 4 100 0 24 50 50 50 50 0 609375 AAAACCCCGAAG CTTCGGGGTTTT True CAACAGTGA TGCTGAAAA True True - AAAACCCCGAAG TCAC CTTCGGGGTTTT TCACTGTTG 80 RIL182_RS03045 intergenic 609206 609401 + down TCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGAAAAATC AGTAAAAGCGTTTCTGGAAAAATAGTCTGGGAATTTGTCTGGGAATCTGACTGGGAATTTCAGCTTAGAGCAAAACGACAGATAATCAGAAAATGCCGAAAATAAAGGCTTTTATCAAATCAGAAACTAAGGAAAATGCGAAAAAATGTATCCCCTTAGTTAGTATATACATCAACAGTGAAAACCCCGAAGGTGACTTCGGGGTTTTTGCTGAAAAATCTAGAAATCTTCATCGTCCGTCCACA GATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTT 39 TTerm_0691 NZ_LR027880.1 609362 609373 12 609378 609389 12 4 100 0 24 50 50 50 50 0 609375 AAAACCCCGAAG CTTCGGGGTTTT True CAACAGTGA TGCTGAAAA True True - AAAACCCCGAAG TCAC CTTCGGGGTTTT TCACTGTTG 80 RIL182_RS03050 intergenic 609206 609401 - down GATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTCACTGTTGATGTATATACTAACTAAGGGGATACATTTTTTCGCATTTTCCTTAGTTTCTGATTTGATAAAAGCCTTTATTTTCGGCATTTTCTGATTATCTGTCGTTTTGCTCTAAGCTGAAATTCCCAGTCAGATTCCCAGACAAATTCCCAGA TGTGGACGGACGATGAAGATTTCTAGATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTTTCACTGTTGATGTATATACTAACTAAGGGGATACATTTTTTCGCATTTTCCTTAGTTTCTGATTTGATAAAAGCCTTTATTTTCGGCATTTTCTGATTATCTGTCGTTTTGCTCTAAGCTGAAATTCCCAGTCAGATTCCCAGACAAATTCCCAGACTATTTTTCCAGAAACGCTTTTACT GATTTTTCAGCAAAAACCCCGAAGTCACCTTCGGGGTTT 39 TTerm_0692 NZ_LR027880.1 615144 615160 17 615166 615182 17 5 94 0 29 50 50 50 50 0 615162 AAAAACTGCCACATCGG CCGGTGTGGCAGTTTTT True GCAAAAATA TAATCACTC True True - AAAAACTGCCACACCGG GTTGT CCGATGTGGCAGTTTTT TATTTTTGC 98 RIL182_RS21110 intergenic 615145 615271 + down AAACTGCCACATCGGACAACCCGGTGTGGCAGTTTTTTAATCACTCTTACAAGTAAAAATAGCCGGTTTGGTAAAATGAGCCTGTAAACAAAAACAAGTCTTTAAGAAAAGAGAGGGCATACGTCA TAAACATGACATAAGGCAAAAATAAAAACTGCCACATCGGACAACCCGGTGTGGCAGTTTTTTAATCACTCTTACAAGTAAAAATAGCCGGTTTGGTAAAATGAGCCTGTAAACAAAAACAAGTCTTTAAGAAAAGAGAGGGCATACGTCATGGAAACAGTTCTTTTAATCATTTA TGACGTATGCCCTCTCTTTTCTTAAAGACTTGTTTTTGTTTACAGGCTCATTTTACCAAACCGGCTATTTTTACTTGTAAGAGTGATTAAAAAACTGCCACACCGGGTTGTCCGATGTGGCAGTTTT 127 TTerm_0693 NZ_LR027880.1 617481 617488 8 617498 617505 8 9 87 0 11 87 12 85 14 0 617492 AAATAATC GAATATTT True ACAAGGTAA AAGAAACAG True False - AAATATTC AGGTTCCTG GATTATTT TTACCTTGT 30 RIL182_RS03080 intergenic 617451 617693 + down TAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGAT GCTTAGACTTAAGGCAGGAGCCTAATAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGATCATCCGCCATTTCCGTCGGAGTTGT ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATT 212 TTerm_0694 NZ_LR027880.1 617481 617488 8 617498 617505 8 9 87 0 11 87 12 85 14 0 617492 AAATAATC GAATATTT True ACAAGGTAA AAGAAACAG True False - AAATATTC AGGTTCCTG GATTATTT TTACCTTGT 30 RIL182_RS03085 intergenic 617451 617693 - down ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTA ACAACTCCGACGGAAATGGCGGATGATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTATTAGGCTCCTGCCTTAAGTCTAAGC ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATT 212 TTerm_0695 NZ_LR027880.1 617631 617653 23 617661 617683 23 7 91 0 36 56 43 57 42 0 617656 AAACAGAAAAATACCGGAGTTCC GGAGCCCCGGTATTTTTCTGTTT True AGTTTACTA TATGAGTGA True True - AAACAGAAAAATACCGGGGCTCC TTTTCAT GGAACTCCGGTATTTTTCTGTTT TAGTAAACT 112 RIL182_RS03080 intergenic 617451 617693 + down TAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGAT GCTTAGACTTAAGGCAGGAGCCTAATAGAAAAGGGAAAAAGATGAAACAAGGTAAAATAATCCAGGAACCTGAATATTTAAGAAACAGATGCCCGTTTTGTTATGAGAAATTGGGAATGAAAGAGAACTGGAAGCGAAAAATAAAAAAGGTTTGTTATTGTCCTAATTGCCACAAAAAAATAGACGAAAGATTTTTAGTTTACTAAACAGAAAAATACCGGAGTTCCATGAAAAGGAGCCCCGGTATTTTTCTGTTTTATGAGTGATCATCCGCCATTTCCGTCGGAGTTGT ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTT 62 TTerm_0696 NZ_LR027880.1 617631 617653 23 617661 617683 23 7 91 0 36 56 43 57 42 0 617656 AAACAGAAAAATACCGGAGTTCC GGAGCCCCGGTATTTTTCTGTTT True AGTTTACTA TATGAGTGA True True - AAACAGAAAAATACCGGGGCTCC TTTTCAT GGAACTCCGGTATTTTTCTGTTT TAGTAAACT 112 RIL182_RS03085 intergenic 617451 617693 - down ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTA ACAACTCCGACGGAAATGGCGGATGATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTTTAGTAAACTAAAAATCTTTCGTCTATTTTTTTGTGGCAATTAGGACAATAACAAACCTTTTTTATTTTTCGCTTCCAGTTCTCTTTCATTCCCAATTTCTCATAACAAAACGGGCATCTGTTTCTTAAATATTCAGGTTCCTGGATTATTTTACCTTGTTTCATCTTTTTCCCTTTTCTATTAGGCTCCTGCCTTAAGTCTAAGC ATCACTCATAAAACAGAAAAATACCGGGGCTCCTTTTCATGGAACTCCGGTATTTTTCTGTT 62 TTerm_0697 NZ_LR027880.1 623814 623835 22 623842 623863 22 6 90 0 34 59 40 60 40 0 623838 GAAAAATCCCGGTACAAATGGA TCCATCTGTATCGGGATTTTTC True GTTAACATG CTATTTTGC True True - GAAAAATCCCGATACAGATGGA AACATA TCCATTTGTACCGGGATTTTTC CATGTTAAC 92 RIL182_RS03110 intergenic 623761 623906 + down AAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTCCTATTTTGCCGGCACAACATATAATCCGTGAATATATATTGTT GATCGAAGCTATTGCTGTAAAATAAAAAGCAATGGATTACACGTTGTGTAAGCAGATCTGTTACCATAGGTTAACATGAAAAATCCCGGTACAAATGGATATGTTTCCATCTGTATCGGGATTTTTCCTATTTTGCCGGCACAACATATAATCCGTGAATATATATTGTTTAAATGTAGACGTCAATATTTCCGC AACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTT 92 TTerm_0698 NZ_LR027880.1 623814 623835 22 623842 623863 22 6 90 0 34 59 40 60 40 0 623838 GAAAAATCCCGGTACAAATGGA TCCATCTGTATCGGGATTTTTC True GTTAACATG CTATTTTGC True True - GAAAAATCCCGATACAGATGGA AACATA TCCATTTGTACCGGGATTTTTC CATGTTAAC 92 RIL182_RS03115 intergenic 623761 623906 - down AACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTTCATGTTAACCTATGGTAACAGATCTGCTTACACAACGTGTAATCCATTGCTTT GCGGAAATATTGACGTCTACATTTAAACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTTCATGTTAACCTATGGTAACAGATCTGCTTACACAACGTGTAATCCATTGCTTTTTATTTTACAGCAATAGCTTCGATC AACAATATATATTCACGGATTATATGTTGTGCCGGCAAAATAGGAAAAATCCCGATACAGATGGAAACATATCCATTTGTACCGGGATTTTT 92 TTerm_0699 NZ_LR027880.1 641766 641776 11 641781 641791 11 4 90 0 17 50 50 50 50 0 641778 AAAGAGGTTGC GCAGCCTCTTT True ATGATAAAA ATGTTATTA True False - AAAGAGGCTGC ATAC GCAACCTCTTT TTTTATCAT 74 RIL182_RS03200 intergenic 641731 641875 + down CAGCATAATAAAAAAATGTTCCTGACATGATAAAAAAGAGGTTGCGTATGCAGCCTCTTTATGTTATTATCTTCCTCATGAGGACAAGTGTCAGCGTGCAACAAACACAACAGATGAATTTCTAAAGAGAGGGATAGAGTCACA TGGTGGAGGCAGTAAAAAATTTTAACAGCATAATAAAAAAATGTTCCTGACATGATAAAAAAGAGGTTGCGTATGCAGCCTCTTTATGTTATTATCTTCCTCATGAGGACAAGTGTCAGCGTGCAACAAACACAACAGATGAATTTCTAAAGAGAGGGATAGAGTCACATGAAAGAAAAAGGTCAGTATTATGT TGTGACTCTATCCCTCTCTTTAGAAATTCATCTGTTGTGTTTGTTGCACGCTGACACTTGTCCTCATGAGGAAGATAATAACATAAAGAGGCTGCATACGCAACCTCTT 109 TTerm_0700 NZ_LR027880.1 645228 645237 10 645242 645251 10 4 90 0 15 75 25 77 22 0 645239 AAGAAAAACG CGTTTTTTTT True GGAAAAAGA TTGGAAAAA True True - AAAAAAAACG TCGC CGTTTTTCTT TCTTTTTCC 46 RIL182_RS03220 intergenic 644925 645283 + down AAAGTCAGTTCCATGCTGCCCATTGCTGCAGGAAAATCAGAAAAGTCTGTTACTGTTTATGCCTTGCCGGGCGTTTGGGTAATAAAGATTTTCTGCGTATGGGCGGCACATACTGCCGCTTTCTATGGATTTGGAAATAATGTATAAATATACATAAATATGCATAAAATCTTAGTGCTATTTGTTTTAGGAAAAAGGTTGAAAAATATCTTATGATATGATACACTTTTTACAATTTAGGAAAAAGACTATAGGTACTAATAAGGGAAAGTTCAGTCAGGGGACTGTCTGGATGGAAAAAGAAGAAAAACGGCGACGTTTTTTTTTTGGAAAAAAAGTGAAAGGACAGGGAAACGAA ACTTGCGTTTCAGAAGATTATTTAAAAAGTCAGTTCCATGCTGCCCATTGCTGCAGGAAAATCAGAAAAGTCTGTTACTGTTTATGCCTTGCCGGGCGTTTGGGTAATAAAGATTTTCTGCGTATGGGCGGCACATACTGCCGCTTTCTATGGATTTGGAAATAATGTATAAATATACATAAATATGCATAAAATCTTAGTGCTATTTGTTTTAGGAAAAAGGTTGAAAAATATCTTATGATATGATACACTTTTTACAATTTAGGAAAAAGACTATAGGTACTAATAAGGGAAAGTTCAGTCAGGGGACTGTCTGGATGGAAAAAGAAGAAAAACGGCGACGTTTTTTTTTTGGAAAAAAAGTGAAAGGACAGGGAAACGAATGAAAGCTCATTTAATACTCGAAGA TTCGTTTCCCTGTCCTTTCACTTTTTTTCCAAAAAAAAAACGTCGCCGTTTTTCT 55 TTerm_0701 NZ_LR027880.1 649754 649775 22 649780 649801 22 4 95 0 39 70 29 71 28 0 649777 AAAAAACGACATGAAAGCAGTT AATTGCTTTCATGTCGTTTTTT True ACAACATGA ATATCGCCG True True - AAAAAACGACATGAAAGCAATT TCTT AACTGCTTTCATGTCGTTTTTT TCATGTTGT 94 RIL182_RS03230 intergenic 649594 649849 + down TTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTTATATCGCCGGAATATCCACTCCAACATATAGAAAAAAGTCGCGCGGAT TATTGCGACCGTAAAGAACTTGTAGTTCTTTGAATTTATAATTCTTTGAACTTGTAGTTCTTTGGATTTATAATTCTTTAAACTTGTAGTTCTTTGAATCTTATAATATAGAAAAGACAGCACAAATCCAAAAGGAGGCGTGCTGTTTTTGCTTTTGCGGAATATGGATATTGGCGACAACATGAAAAAACGACATGAAAGCAGTTAAGAAATTGCTTTCATGTCGTTTTTTATATCGCCGGAATATCCACTCCAACATATAGAAAAAAGTCGCGCGGATTAACGGAGTTTCATTTTTTTGCGCG ATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTT 95 TTerm_0702 NZ_LR027880.1 649754 649775 22 649780 649801 22 4 95 0 39 70 29 71 28 0 649777 AAAAAACGACATGAAAGCAGTT AATTGCTTTCATGTCGTTTTTT True ACAACATGA ATATCGCCG True True - AAAAAACGACATGAAAGCAATT TCTT AACTGCTTTCATGTCGTTTTTT TCATGTTGT 94 RIL182_RS03235 intergenic 649594 649849 - down ATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTTTCATGTTGTCGCCAATATCCATATTCCGCAAAAGCAAAAACAGCACGCCTCCTTTTGGATTTGTGCTGTCTTTTCTATATTATAAGATTCAAAGAACTACAAGTTTAAAGAATTATAAATCCAAAGAACTACAAGTTCAAAGAATTATAAATTCAAAGAA CGCGCAAAAAAATGAAACTCCGTTAATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTTTCATGTTGTCGCCAATATCCATATTCCGCAAAAGCAAAAACAGCACGCCTCCTTTTGGATTTGTGCTGTCTTTTCTATATTATAAGATTCAAAGAACTACAAGTTTAAAGAATTATAAATCCAAAGAACTACAAGTTCAAAGAATTATAAATTCAAAGAACTACAAGTTCTTTACGGTCGCAATA ATCCGCGCGACTTTTTTCTATATGTTGGAGTGGATATTCCGGCGATATAAAAAACGACATGAAAGCAATTTCTTAACTGCTTTCATGTCGTTTTT 95 TTerm_0703 NZ_LR027880.1 652706 652722 17 652731 652746 16 8 88 5 17 90 9 93 6 0 652726 AAAAAGATAAATTTCAA TTGAATTTATTTTTTT True TGAAAGAAA AAAAAAGAT True True - AAAAAAATAAATTCAA ACTTTCGG TTGAAATTTATCTTTTT TTTCTTTCA 42 RIL182_RS03240 intergenic 652509 652855 + down ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAA TATAGGTAATCATGTGTTTTATTAAACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAATGGCAAAGAAAGTAGTTTTAGCAGG TTTTGAATTCTCCTTTCAATTTAACACAAAGCTCTGCTTTTGCAGAGAATTTGTTTCTTTCTCTTTAAAGTTGCCGAAAAATGCTGTTAATTTTTTAACAATCTTTTTTAAAAAAATAAATTCAAACTTTCGGTTGAAATTTATCTTTT 149 TTerm_0704 NZ_LR027880.1 652748 652761 14 652766 652779 14 4 78 0 13 82 17 90 9 0 652763 AAAAAGATTGTTAA TTAACAGCATTTTT True TTTTTTTAA CGGCAACTT True True - AAAAATGCTGTTAA TTTT TTAACAATCTTTTT TTAAAAAAA 34 RIL182_RS03240 intergenic 652509 652855 + down ACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAA TATAGGTAATCATGTGTTTTATTAAACAAAATGATAAAATGATAAAAATTTAACAAAAAACCCCGCAAAATGGAGCAAAAAGGAAGTAAAAAATTGTTTACAAAGATGAAAAATAAAGAAAGCTATTGCAATTAATTGTGAAATATGTTAGCATAAGAAAGTACAAGAAATGCAGAAAAATAGCTGATTACATAGCAAATAAGCTTTTTAAAATGAAAGAAAAAAAGATAAATTTCAACCGAAAGTTTGAATTTATTTTTTTAAAAAAGATTGTTAAAAAATTAACAGCATTTTTCGGCAACTTTAAAGAGAAAGAAACAAATTCTCTGCAAAAGCAGAGCTTTGTGTTAAATTGAAAGGAGAATTCAAAATGGCAAAGAAAGTAGTTTTAGCAGG TTTTGAATTCTCCTTTCAATTTAACACAAAGCTCTGCTTTTGCAGAGAATTTGTTTCTTTCTCTTTAAAGTTGCCGAAAAATGCTGTTAATTTTTTAACAATCTTTT 107 TTerm_0705 NZ_LR027880.1 665420 665433 14 665442 665455 14 8 78 0 13 82 17 81 18 0 665437 TGTTTATTAAAACA TGTTTCATAAAACA True TAAAAGCGT AAAGTTTAT True False - TGTTTTATGAAACA CGCCCATT TGTTTTAATAAACA ACGCTTTTA 42 RIL182_RS03320 intergenic 665407 665717 + down AACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATA GAAATATCTGCATCAGCATGCATAAAACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATATGCCAAAAACAAAGTTACAGGAAGT TATTTTTCTCTCCTCATTCTTTTGATAAAATAATTATTTTTGCCGACAAAAAAACAGAGAAAGCAATCTTTGCGATCGCTTTCTCTGCTGCACGTCGTGTGATTATTATAGCGTATTCCAAAAGCTCATATAATAGTTTTAATTTCACAAACTTTTTTTGTAATTCATGGAACTCATTGTGCAATTTTGTAAATTGTATTTTTCCATCTCCTGAAATACATTTTCCCGTTTTATGAAACACGTTTTTGTTTTAATAAACTTTTGTTTTATGAAACACGCCCATTTGTTTTAATAAAC 297 TTerm_0706 NZ_LR027880.1 665459 665471 13 665478 665490 13 6 76 0 11 80 19 80 20 0 665474 GTTTATTAAAACA TGTTTCATAAAAC True AAACAAAAG GGGAAAATG True False - GTTTTATGAAACA CGTTTT TGTTTTAATAAAC CTTTTGTTT 38 RIL182_RS03320 intergenic 665407 665717 + down AACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATA GAAATATCTGCATCAGCATGCATAAAACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATATGCCAAAAACAAAGTTACAGGAAGT TATTTTTCTCTCCTCATTCTTTTGATAAAATAATTATTTTTGCCGACAAAAAAACAGAGAAAGCAATCTTTGCGATCGCTTTCTCTGCTGCACGTCGTGTGATTATTATAGCGTATTCCAAAAGCTCATATAATAGTTTTAATTTCACAAACTTTTTTTGTAATTCATGGAACTCATTGTGCAATTTTGTAAATTGTATTTTTCCATCTCCTGAAATACATTTTCCCGTTTTATGAAACACGTTTTTGTTTTAATAAA 258 TTerm_0707 NZ_LR027880.1 665562 665569 8 665579 665586 8 9 87 0 11 87 12 85 14 0 665573 AAAAGTTT AAACTATT True ATTACAAAA ATATGAGCT True False - AATAGTTT TAATTTCAC AAACTTTT TTTTGTAAT 30 RIL182_RS03320 intergenic 665407 665717 + down AACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATA GAAATATCTGCATCAGCATGCATAAAACGTAAAAGCGTGTTTATTAAAACAAATGGGCGTGTTTCATAAAACAAAAGTTTATTAAAACAAAAACGTGTTTCATAAAACGGGAAAATGTATTTCAGGAGATGGAAAAATACAATTTACAAAATTGCACAATGAGTTCCATGAATTACAAAAAAAGTTTGTGAAATTAAAACTATTATATGAGCTTTTGGAATACGCTATAATAATCACACGACGTGCAGCAGAGAAAGCGATCGCAAAGATTGCTTTCTCTGTTTTTTTGTCGGCAAAAATAATTATTTTATCAAAAGAATGAGGAGAGAAAAATATGCCAAAAACAAAGTTACAGGAAGT TATTTTTCTCTCCTCATTCTTTTGATAAAATAATTATTTTTGCCGACAAAAAAACAGAGAAAGCAATCTTTGCGATCGCTTTCTCTGCTGCACGTCGTGTGATTATTATAGCGTATTCCAAAAGCTCATATAATAGTTTTAATTTCACAAACTTT 155 TTerm_0708 NZ_LR027880.1 676154 676161 8 676168 676175 8 6 87 0 11 68 31 71 28 0 676164 AACAATAC GTCTTGTT True ATGTAGAAA ATGGGTGAT True False - AACAAGAC CTCCTA GTATTGTT TTTCTACAT 46 RIL182_RS03375 intergenic 676164 676176 + down AGAGATATGTAGAAAACAATACTAGGAGGTCTTGTTATGGGTGATTTTGGTGATGCAGAAAG TAACAAGACCTCCTAGTATTGT 22 TTerm_0709 NZ_LR027880.1 681863 681876 14 681881 681894 14 4 85 0 18 42 57 41 58 0 681878 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS03400 intergenic 681516 681893 + down AATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT ATATCATTTGTGCTTGAAAAGATAAAATAGGTATAAGCATATTAGGGATTATATGTTGAGGTGTTGAATTATTGTGCTGACAATAAAATGACAATACAATCTTCATAAAATCCACGCAACAGGTAGAATTCAGACAAAACTCTCGGCGTTCTACTGCAAAAAGCAATCTCGAACACCACAAAACAACTTTACAATTAAGAGTTTGAATAATTCACACAATCACGAGAAACCAGTATTCATGCTGGTTACAAACAAATTTGTTTAGTGATTGGCAACAAAATGGCAACATTTTGTGATTATTCAAGAGATAAAAATTTTATTTCATAACGTATATAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0710 NZ_LR027880.1 681863 681876 14 681881 681894 14 4 85 0 18 42 57 41 58 0 681878 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS03405 intergenic 681516 681893 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTATATACGTTATGAAATAAAATTTTTATCTCTTGAATAATCACAAAATGTTGCCATTTTGTTGCCAATCACTAAACAAATTTGTTTGTAACCAGCATGAATACTGGTTTCTCGTGATTGTGTGAATTATTCAAACTCTTAATTGTAAAGTTGTTTTGTGGTGTTCGAGATTGCTTTTTGCAGTAGAACGCCGAGAGTTTTGTCTGAATTCTACCTGTTGCGTGGATTTTATGAAGATTGTATTGTCATTTTATTGTCAGCACAATAATTCAACACCTCAACATATAATCCCTAATATGCTTATACCTATT GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTATATACGTTATGAAATAAAATTTTTATCTCTTGAATAATCACAAAATGTTGCCATTTTGTTGCCAATCACTAAACAAATTTGTTTGTAACCAGCATGAATACTGGTTTCTCGTGATTGTGTGAATTATTCAAACTCTTAATTGTAAAGTTGTTTTGTGGTGTTCGAGATTGCTTTTTGCAGTAGAACGCCGAGAGTTTTGTCTGAATTCTACCTGTTGCGTGGATTTTATGAAGATTGTATTGTCATTTTATTGTCAGCACAATAATTCAACACCTCAACATATAATCCCTAATATGCTTATACCTATTTTATCTTTTCAAGCACAAATGATAT AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0711 NZ_LR027880.1 692873 692886 14 692895 692908 14 8 78 0 13 85 14 90 9 0 692890 AAATTGAATAAATT AATTCACACAATTT True TAAAAACAA ATCGAAAAA True False - AAATTGTGTGAATT TTATCTTC AATTTATTCAATTT TTGTTTTTA 34 RIL182_RS21575 intergenic 692772 693283 + down GGCTGTGCTTAATGTGTCAGGTTAAATTCTGACACCTTTTTAAGCCACAAACAGCTCCTTGATATCATTACAATAAATGGAAATAATGCAAGTAAAAACAAAATTGAATAAATTGAAGATAAAATTCACACAATTTATCGAAAAACCGCTTATTGATTTACTTTAAAAAATATCAAAAATAGTGTTGACTTCGTAAGTTTATGATGATATTATAACTGAGCTGAAACGCGAAATACCTTGATTTGCAAGGCATGCGAATCAGAAAAATAAAAAAAGTCTTGACAAACACAAAGTTGTCTGCTAAGATGTAGAAGTTGTTTGAAATGAATAAACAATTTGAACAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATAGATATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTT TATACAGCCTGATAAATTCAACTAGGGCTGTGCTTAATGTGTCAGGTTAAATTCTGACACCTTTTTAAGCCACAAACAGCTCCTTGATATCATTACAATAAATGGAAATAATGCAAGTAAAAACAAAATTGAATAAATTGAAGATAAAATTCACACAATTTATCGAAAAACCGCTTATTGATTTACTTTAAAAAATATCAAAAATAGTGTTGACTTCGTAAGTTTATGATGATATTATAACTGAGCTGAAACGCGAAATACCTTGATTTGCAAGGCATGCGAATCAGAAAAATAAAAAAAGTCTTGACAAACACAAAGTTGTCTGCTAAGATGTAGAAGTTGTTTGAAATGAATAAACAATTTGAACAACAAAGAACCTTGATAACTGAACAGTGAAATAACCTTGAAAGATTCAATGAATTTCAGGGTGTTGTGAATAACAACACACGAACGTTTCTATAAAGAAACAACCTTAAAACAGTAAATCAGATAGATATCTGATTAAGCCAGTTTATAACTGGACAGGAAAACTTTTTAACATGAGAGTTTGATCCTGGCTCA AAAAAGTTTTCCTGTCCAGTTATAAACTGGCTTAATCAGATATCTATCTGATTTACTGTTTTAAGGTTGTTTCTTTATAGAAACGTTCGTGTGTTGTTATTCACAACACCCTGAAATTCATTGAATCTTTCAAGGTTATTTCACTGTTCAGTTATCAAGGTTCTTTGTTGTTCAAATTGTTTATTCATTTCAAACAACTTCTACATCTTAGCAGACAACTTTGTGTTTGTCAAGACTTTTTTTATTTTTCTGATTCGCATGCCTTGCAAATCAAGGTATTTCGCGTTTCAGCTCAGTTATAATATCATCATAAACTTACGAAGTCAACACTATTTTTGATATTTTTTAAAGTAAATCAATAAGCGGTTTTTCGATAAATTGTGTGAATTTTATCTTCAATTTATTCAATT 410 TTerm_0712 NZ_LR027880.1 695454 695459 6 695464 695469 6 4 100 0 12 66 33 66 33 0 695461 GGTAAA TTTACC True AACAAAACG AAACGCGTT True False - GGTAAA TTTC TTTACC CGTTTTGTT 40 RIL182_RS03485 intergenic 695063 695531 + down TAAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAATTCAACGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAAAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAGTCATAAAGCATTTCTTTGAAAGTGAAGAATGGTAAAAAACATGAATTACTTTTTCAAAAGTGTAAAATGACGCGGAAGTTGCGAAGCAACTTCTAATGCATGAGCGCCATTGCGCGAAATGCTATTGGCTTCGCATAGCGAAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTGAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGAG ATGGGAAAGCAGGTGGCTGCCAGATTAAAAACAAACATAAGATAGAGATATCTTATTATAGATAAAACGGGCATCGGAAGATGCTAACCTAATTCAACGGGGAAGCGTTGTTTAGATAACTGGTTTTACCAGTGATTAGAGAGTTCAAAAGATTGAGTTTTCTAATGACTGATAAACATCAGTCAAAGTCATAAAGCATTTCTTTGAAAGTGAAGAATGGTAAAAAACATGAATTACTTTTTCAAAAGTGTAAAATGACGCGGAAGTTGCGAAGCAACTTCTAATGCATGAGCGCCATTGCGCGAAATGCTATTGGCTTCGCATAGCGAAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTGAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGTG CTCTTAACTAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTCAAAAACGCGTTTGGTAAATTTCTTTAC 77 TTerm_0713 NZ_LR027880.1 722885 722891 7 722896 722902 7 4 100 0 14 42 57 42 57 0 722893 TGCCCAA TTGGGCA True TAAAATCCT TTGCTCCAT True False - TGCCCAA CACA TTGGGCA AGGATTTTA 60 RIL182_RS03595 intergenic 722837 723049 + down ACGTAAACAATGTTTTTTAACATTTGTATAAACAAGGAGTAAAATCCTGCCCAATGTGTTGGGCATTGCTCCATGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTCATATTA GAGCAATTTAGATCGCAGAAAATAAACGTAAACAATGTTTTTTAACATTTGTATAAACAAGGAGTAAAATCCTGCCCAATGTGTTGGGCATTGCTCCATGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTCATATTATGAAAAAAAGAGTACTTACCACAAT TAATATGAATCCTCCTTGTTTTGCGGAGCAAAATGCGACTGCCTTTGCAGGAGCAGAGGATTTTACTCCTTGTTTTGCGGAGCAAAATGTCTGCTATGCATGCTATGCTCAATAGCTTGCATAGCATGTGCCTCTTGCATGGAGCAATGCCCAACACATTGGGC 164 TTerm_0714 NZ_LR027880.1 729367 729372 6 729379 729384 6 6 100 0 12 66 33 66 33 0 729375 GCAATT AATTGC True TAAAAACAG CAGTAAAAA True False - GCAATT CAAGTT AATTGC CTGTTTTTA 40 RIL182_RS03635 intergenic 729163 729447 + down AACGTATAGATTGAAGCCTTCTGCTAAATGCAATTCAACTGATCATTCATTCGTTAAAGCAGATAGAACAGCTGCAGAAAAAGCCCCATGCGGTAGAGTACGTTTTCAGACCGCATGGTGGAACAGCAGAAATACACAGGGGTATTCCGGACGATTCGAAAAATGCCAAAAGTAACGGAATCGCAAGATTTGCAATAAAAACAGCAATTAACTTGAATTGCCAGTAAAAAAATGTACATGCTATAATGCAATTATCAAGATTAAGGGGGAAAAAGATATGCCAA TGCGAGAGGACTGCTGGCAAGATAAAACGTATAGATTGAAGCCTTCTGCTAAATGCAATTCAACTGATCATTCATTCGTTAAAGCAGATAGAACAGCTGCAGAAAAAGCCCCATGCGGTAGAGTACGTTTTCAGACCGCATGGTGGAACAGCAGAAATACACAGGGGTATTCCGGACGATTCGAAAAATGCCAAAAGTAACGGAATCGCAAGATTTGCAATAAAAACAGCAATTAACTTGAATTGCCAGTAAAAAAATGTACATGCTATAATGCAATTATCAAGATTAAGGGGGAAAAAGATATGCCAATGCAGATGGGTTTCCGCTGGTATGG TTGGCATATCTTTTTCCCCCTTAATCTTGATAATTGCATTATAGCATGTACATTTTTTTACTGGCAATTCAAGTTAATTG 80 TTerm_0715 NZ_LR027880.1 743314 743326 13 743334 743346 13 7 92 0 21 50 50 50 50 0 743329 AAAAGGCAGGCTG CAGCCTGTCTTTT True TAAAAAAGA TTAATGCTT True True - AAAAGACAGGCTG CAAAACA CAGCCTGCCTTTT TCTTTTTTA 74 RIL182_RS03695 intergenic 743256 743354 + down TGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTTTTAATGCT ACAGCCGGTACTGCAGGAGCCATGATGAAAAAGGGGAAGCATGGAATGTATGTTTCGTGAATATTTAGTCATCGTAAAAAAGAAAAGGCAGGCTGTGTTTTGCAGCCTGTCTTTTTTAATGCTTAAGCGTTTTGGGACGCCTCTAATG AGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTT 40 TTerm_0716 NZ_LR027880.1 743314 743326 13 743334 743346 13 7 92 0 21 50 50 50 50 0 743329 AAAAGGCAGGCTG CAGCCTGTCTTTT True TAAAAAAGA TTAATGCTT True True - AAAAGACAGGCTG CAAAACA CAGCCTGCCTTTT TCTTTTTTA 74 RIL182_RS03700 intergenic 743256 743354 - down AGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTTTCTTTTTTACGATGACTAAATATTCACGAAACATACATTCCATGCTTCCCCTTTTTCA CATTAGAGGCGTCCCAAAACGCTTAAGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTTTCTTTTTTACGATGACTAAATATTCACGAAACATACATTCCATGCTTCCCCTTTTTCATCATGGCTCCTGCAGTACCGGCTGT AGCATTAAAAAAGACAGGCTGCAAAACACAGCCTGCCTTT 40 TTerm_0717 NZ_LR027880.1 748016 748026 11 748031 748041 11 4 81 0 12 72 27 77 22 0 748028 AAAAACAGAAC GTTCGATTTTT True TTTTGCAGA GCTGTACAA True True - AAAAATCGAAC TTTT GTTCTGTTTTT TCTGCAAAA 48 RIL182_RS03710 intergenic 747939 748164 + down AATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCA TGCGATTGTGAACAGTATGGTATAAAATAAACAGTGTAAAATAAAAGGCAAAGCATAGCAAAGCATGGGATAAAATATTGTCCTGTGCTTTGTTTTTGCAGAAAAACAGAACAAAAGTTCGATTTTTGCTGTACAATTTATAAATTGAATGATATACTGGAAACAGAATCATACTAAAATATTGATGTTAATTGTTTCCGGATAGAAAGTGTTTCTATATTTTATAAATAGGGAGAAATGAGGAATATCATGGATCATTTCAAATTACATTCAAA TGATATTCCTCATTTCTCCCTATTTATAAAATATAGAAACACTTTCTATCCGGAAACAATTAACATCAATATTTTAGTATGATTCTGTTTCCAGTATATCATTCAATTTATAAATTGTACAGCAAAAATCGAACTTTTGTTCTGTTTT 148 TTerm_0718 NZ_LR027880.1 753087 753111 25 753121 753145 25 9 84 0 30 62 38 66 33 0 753115 ATGTATAGAGGAAAAGAAGTGGCTG CAGCCACTTCTTTTGCGTTATAAAT True AGTTATATA CCGTATGGA True True - ATTTATAACGCAAAAGAAGTGGCTG CCTTTTCTA CAGCCACTTCTTTTCCTCTATACAT TATATAACT 92 RIL182_RS03720 intergenic 753072 753163 + down AACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAATCCGTATGGAATGAATCAT GAAGTATTTAGAGAAGGATAAATAAAACGGAAGTTATATATGTATAGAGGAAAAGAAGTGGCTGTAGAAAAGGCAGCCACTTCTTTTGCGTTATAAATCCGTATGGAATGAATCATTATTTTTTTGTTCGAATGATATCAA ATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACA 76 TTerm_0719 NZ_LR027880.1 753087 753111 25 753121 753145 25 9 84 0 30 62 38 66 33 0 753115 ATGTATAGAGGAAAAGAAGTGGCTG CAGCCACTTCTTTTGCGTTATAAAT True AGTTATATA CCGTATGGA True True - ATTTATAACGCAAAAGAAGTGGCTG CCTTTTCTA CAGCCACTTCTTTTCCTCTATACAT TATATAACT 92 RIL182_RS03725 intergenic 753072 753163 - down ATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACATATATAACTTCCGTT TTGATATCATTCGAACAAAAAAATAATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACATATATAACTTCCGTTTTATTTATCCTTCTCTAAATACTTC ATGATTCATTCCATACGGATTTATAACGCAAAAGAAGTGGCTGCCTTTTCTACAGCCACTTCTTTTCCTCTATACA 76 TTerm_0720 NZ_LR027880.1 756487 756496 10 756501 756510 10 4 100 0 20 30 70 30 70 0 756498 AAGGCGCTGC GCAGCGCCTT True AGTTTAAAA ATCACGTTC True False - AAGGCGCTGC GATT GCAGCGCCTT TTTTAAACT 80 RIL182_RS03740 intergenic 756485 756902 + down AAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAA AGGTTGGTTTATAGAAGGAGTTTAAAAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAATGATGAGTACAGATATTGGTATCGA TTTTAAATACTTGCCCCTTTCGTCTCTCTGTTCCTGAATCTATGGATAATATTCCCATATCCACGCGGACATAGAAATGCCATTAAACCTATTTTTACATATACAGTCCTATTATATACAAAAAATGGGATTTTTCAAAGGTTTTTTTATGGCAGGACTGCATTTTTAAAAAAAATAAGAAAATCTTCATTCTTTTTTATTTATTTTGTTTATTTTTCATTTTGTCATCACATTTTCATCACATTTCTATTTTATATTCTAAGAGTACTAGCTAATAAGTCCGATACAAACGGACCCAACCGTCAGAATTACTGACGGGCAGTATAATTTTTCATAACTCATGCTTCCCGGTTTTCCGCAAGGATTTCCGGGGAGTACTCCCCGAACGTGATAAGGCGCTGCGATTGCAGCGCCT 415 TTerm_0721 NZ_LR027880.1 756701 756713 13 756722 756734 13 8 84 0 16 92 7 90 9 0 756717 AAATAAAAAAGAA TTCTTATTTTTTT True AACAAAATA TAAAAATGC True True - AAAAAAATAAGAA AATCTTCA TTCTTTTTTATTT TATTTTGTT 40 RIL182_RS03740 intergenic 756485 756902 + down AAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAA AGGTTGGTTTATAGAAGGAGTTTAAAAAGGCGCTGCAATCGCAGCGCCTTATCACGTTCGGGGAGTACTCCCCGGAAATCCTTGCGGAAAACCGGGAAGCATGAGTTATGAAAAATTATACTGCCCGTCAGTAATTCTGACGGTTGGGTCCGTTTGTATCGGACTTATTAGCTAGTACTCTTAGAATATAAAATAGAAATGTGATGAAAATGTGATGACAAAATGAAAAATAAACAAAATAAATAAAAAAGAATGAAGATTTTCTTATTTTTTTTAAAAATGCAGTCCTGCCATAAAAAAACCTTTGAAAAATCCCATTTTTTGTATATAATAGGACTGTATATGTAAAAATAGGTTTAATGGCATTTCTATGTCCGCGTGGATATGGGAATATTATCCATAGATTCAGGAACAGAGAGACGAAAGGGGCAAGTATTTAAAATGATGAGTACAGATATTGGTATCGA TTTTAAATACTTGCCCCTTTCGTCTCTCTGTTCCTGAATCTATGGATAATATTCCCATATCCACGCGGACATAGAAATGCCATTAAACCTATTTTTACATATACAGTCCTATTATATACAAAAAATGGGATTTTTCAAAGGTTTTTTTATGGCAGGACTGCATTTTTAAAAAAAATAAGAAAATCTTCATTCTTTTTTATT 201 TTerm_0722 NZ_LR027880.1 757965 757971 7 757977 757983 7 5 100 0 14 85 14 85 14 0 757973 TGAAAAA TTTTTCA True AAAACGTGT TATGCGGAA True False - TGAAAAA CCTTA TTTTTCA ACACGTTTT 36 RIL182_RS03745 intergenic 757897 758040 + down ATTTTTTTTGTGTTTTGCCGATACAATAAATGAAAGATATGCTTTGTGCACAGATAGGGAAAACGTGTGAAAAATAAGGTTTTTCATATGCGGAAATACGGATTAAAATACATCAGAAGCTGTGCAGAAATGGAGAGTTTACA AGCCGGAAAACGTGACGAAGATTAAATTTTTTTTGTGTTTTGCCGATACAATAAATGAAAGATATGCTTTGTGCACAGATAGGGAAAACGTGTGAAAAATAAGGTTTTTCATATGCGGAAATACGGATTAAAATACATCAGAAGCTGTGCAGAAATGGAGAGTTTACATGGTAAAGGGATTGTATACAGCGTA TGTAAACTCTCCATTTCTGCACAGCTTCTGATGTATTTTAATCCGTATTTCCGCATATGAAAAACCTTATTTTTC 75 TTerm_0723 NZ_LR027880.1 776317 776322 6 776328 776333 6 5 100 0 12 33 66 33 66 0 776324 CCTCTG CAGAGG True AGGAAAATC GCAAATTTT True True - CCTCTG GTGAG CAGAGG GATTTTCCT 56 RIL182_RS03835 intergenic 776233 776390 + down GAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAA TGAGGATATGTATCAGAACAGGTAAGAAGATGCAGGCAGCAGTACCGCCAGATGGGGCGATACTGCTTGTTTGCGTTTTATAATGGACGTGAAAACAAGGAGGAAAATCCTCTGCTCACCAGAGGGCAAATTTTACATGATAAAATTGCATTTTGCTCCGCAAAACAAGGAGGATTGAATAATGAAGGGTATTATTTTAGCAGGTGG TTATTCAATCCTCCTTGTTTTGCGGAGCAAAATGCAATTTTATCATGTAAAATTTGCCCTCTGGTGAGCAGAG 73 TTerm_0724 NZ_LR027880.1 790249 790264 16 790269 790284 16 4 93 0 27 65 34 66 33 0 790266 GTGCGAAAAATAAGCT AGCTTATTTTTTGCAC True AAGGATTAG GGCTATTTG True True - GTGCAAAAAATAAGCT ATCG AGCTTATTTTTCGCAC CTAATCCTT 70 RIL182_RS03895 intergenic 790241 790387 + down AGGATTAGTGCGAAAAATAAGCTCGATAGCTTATTTTTTGCACGGCTATTTGTTTCTAAATAAAAACAAATAGCTTTGATGGCAGACGAGAATTTGAGATTCTCGTCGCCTCTTCTCAGCAAGTTGCTCAAAAATGAGGATGAATA TTCGTATGTATTATCACAGAAATAAAGGATTAGTGCGAAAAATAAGCTCGATAGCTTATTTTTTGCACGGCTATTTGTTTCTAAATAAAAACAAATAGCTTTGATGGCAGACGAGAATTTGAGATTCTCGTCGCCTCTTCTCAGCAAGTTGCTCAAAAATGAGGATGAATATGAAAAAGAAGATTTTATTTAACGG TATTCATCCTCATTTTTGAGCAACTTGCTGAGAAGAGGCGACGAGAATCTCAAATTCTCGTCTGCCATCAAAGCTATTTGTTTTTATTTAGAAACAAATAGCCGTGCAAAAAATAAGCTATCGAGCTTATTTTTCGCA 138 TTerm_0725 NZ_LR027880.1 803403 803418 16 803428 803443 16 9 87 0 22 37 62 35 64 0 803422 ATACCCCGGTGGGATG CATCCTGCCGGGGTAT True AAAAAGAGA TTTTAAGAT True True - ATACCCCGGCAGGATG TATGATGAT CATCCCACCGGGGTAT TCTCTTTTT 68 RIL182_RS03940 intergenic 803390 803543 + down AAGTAAAAAGAGATACCCCGGTGGGATGATCATCATACATCCTGCCGGGGTATTTTTAAGATTTTATGAAAATTCTGGTAAGATATATTCAAAGGTTGGGTTTTATGATAAAATAATATAGATTATGCAAAGGTATGAATGTGAGGTACTTCA TTCCGTAAAGACAAAAGCAAAATAAAAGTAAAAAGAGATACCCCGGTGGGATGATCATCATACATCCTGCCGGGGTATTTTTAAGATTTTATGAAAATTCTGGTAAGATATATTCAAAGGTTGGGTTTTATGATAAAATAATATAGATTATGCAAAGGTATGAATGTGAGGTACTTCATGAGGAAAAGGGAAAGATATAAACA TGAAGTACCTCACATTCATACCTTTGCATAATCTATATTATTTTATCATAAAACCCAACCTTTGAATATATCTTACCAGAATTTTCATAAAATCTTAAAAATACCCCGGCAGGATGTATGATGATCATCCCACCGGGGTA 140 TTerm_0726 NZ_LR027880.1 810402 810418 17 810426 810442 17 7 82 0 19 50 50 50 50 0 810421 ATCCCTGGTTTTGCCTG CAGGAAAAACAGGGGAT True AAAATATAA ATCCATTTT True True - ATCCCCTGTTTTTCCTG AAATTCA CAGGCAAAACCAGGGAT TTATATTTT 62 RIL182_RS03955 intergenic 810361 810530 + down TCCTTGGCTTAAAGACAGAGATTTTGCTTTTAAAAATATAATCCCTGGTTTTGCCTGTGAATTTCAGGAAAAACAGGGGATATCCATTTTCAATATAAAATCCCACAAAAAATCAAGTGTTTAACGGACAAAAGAAAAAGAAAATCTATTCCATTGTTCAACATTGTCA ATATTCGGTCTTTCTCAGAAAGTAATCCTTGGCTTAAAGACAGAGATTTTGCTTTTAAAAATATAATCCCTGGTTTTGCCTGTGAATTTCAGGAAAAACAGGGGATATCCATTTTCAATATAAAATCCCACAAAAAATCAAGTGTTTAACGGACAAAAGAAAAAGAAAATCTATTCCATTGTTCAACATTGTCATGCCGGTACTGCTTTTTCTGATGCC TGACAATGTTGAACAATGGAATAGATTTTCTTTTTCTTTTGTCCGTTAAACACTTGATTTTTTGTGGGATTTTATATTGAAAATGGATATCCCCTGTTTTTCCTGAAATTCACAGGCAAAACCAGGGA 128 TTerm_0727 NZ_LR027880.1 811539 811546 8 811552 811559 8 5 87 0 11 68 31 71 28 0 811548 TGTAATCA TGGTTACA True CCATAAAAT CCTTCCCAA True False - TGTAACCA CTTTT TGATTACA ATTTTATGG 38 RIL182_RS21585 intergenic 811311 811680 + down GCTGCTAACAGAAAAAGTGAAACAGATTTTATATGGAAAAGGCGGATAGAGAAAATCAGCCGAAAAAAACCTAGGGAAAAAATAGGGGGGATTTTGCGCGTATTGACCAAGAATGAAGGGCAGCCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATGGATAAAAAAGTTAAAAGCGAAATCTCTGGCTTAAAGTAGGATCTTGAGTTTCCATAAAATGTAATCAAAAAGTGGTTACACCTTCCCAAAGCACTAATCTTCCACTTTTTTGAAGAGCTAGGAATGGAAGTTCTGTGAGTAGAAGTACTTTAATAAGCCCCACCGAAATCGGGCTTTTGGAGATATATTCTTGTATCTATC TATAAACCGGATTTTTTTGCGATGAGCTGCTAACAGAAAAAGTGAAACAGATTTTATATGGAAAAGGCGGATAGAGAAAATCAGCCGAAAAAAACCTAGGGAAAAAATAGGGGGGATTTTGCGCGTATTGACCAAGAATGAAGGGCAGCCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATGGATAAAAAAGTTAAAAGCGAAATCTCTGGCTTAAAGTAGGATCTTGAGTTTCCATAAAATGTAATCAAAAAGTGGTTACACCTTCCCAAAGCACTAATCTTCCACTTTTTTGAAGAGCTAGGAATGGAAGTTCTGTGAGTAGAAGTACTTTAATAAGCCCCACCGAAATCGGGCTTTTGGAGATATATTCTTGTATCTATCTAAGCGGTCAGCTTAAGGCAGAGTT GATAGATACAAGAATATATCTCCAAAAGCCCGATTTCGGTGGGGCTTATTAAAGTACTTCTACTCACAGAACTTCCATTCCTAGCTCTTCAAAAAAGTGGAAGATTAGTGCTTTGGGAAGGTGTAACCACTTTTTGATTAC 141 TTerm_0728 NZ_LR027880.1 811539 811546 8 811552 811559 8 5 87 0 11 68 31 71 28 0 811548 TGTAATCA TGGTTACA True CCATAAAAT CCTTCCCAA True False - TGTAACCA CTTTT TGATTACA ATTTTATGG 38 RIL182_RS03970 intergenic 811311 811680 - down GATAGATACAAGAATATATCTCCAAAAGCCCGATTTCGGTGGGGCTTATTAAAGTACTTCTACTCACAGAACTTCCATTCCTAGCTCTTCAAAAAAGTGGAAGATTAGTGCTTTGGGAAGGTGTAACCACTTTTTGATTACATTTTATGGAAACTCAAGATCCTACTTTAAGCCAGAGATTTCGCTTTTAACTTTTTTATCCATGCATTTTTATAAATAATCCAGTTATCAGCATTCCATCTGCGGCTGCCCTTCATTCTTGGTCAATACGCGCAAAATCCCCCCTATTTTTTCCCTAGGTTTTTTTCGGCTGATTTTCTCTATCCGCCTTTTCCATATAAAATCTGTTTCACTTTTTCTGTTAGCAGC AACTCTGCCTTAAGCTGACCGCTTAGATAGATACAAGAATATATCTCCAAAAGCCCGATTTCGGTGGGGCTTATTAAAGTACTTCTACTCACAGAACTTCCATTCCTAGCTCTTCAAAAAAGTGGAAGATTAGTGCTTTGGGAAGGTGTAACCACTTTTTGATTACATTTTATGGAAACTCAAGATCCTACTTTAAGCCAGAGATTTCGCTTTTAACTTTTTTATCCATGCATTTTTATAAATAATCCAGTTATCAGCATTCCATCTGCGGCTGCCCTTCATTCTTGGTCAATACGCGCAAAATCCCCCCTATTTTTTCCCTAGGTTTTTTTCGGCTGATTTTCTCTATCCGCCTTTTCCATATAAAATCTGTTTCACTTTTTCTGTTAGCAGCTCATCGCAAAAAAATCCGGTTTATA GATAGATACAAGAATATATCTCCAAAAGCCCGATTTCGGTGGGGCTTATTAAAGTACTTCTACTCACAGAACTTCCATTCCTAGCTCTTCAAAAAAGTGGAAGATTAGTGCTTTGGGAAGGTGTAACCACTTTTTGATTAC 141 TTerm_0729 NZ_LR027880.1 827064 827071 8 827080 827087 8 8 87 0 11 68 31 71 28 0 827075 AAAGGATA TATCCGTT True AAGAATCAA ATATTGGAG True False - AACGGATA ACTAAAAA TATCCTTT TTGATTCTT 46 RIL182_RS04025 intergenic 826863 827227 + down TGTAAAAAATATAGCACAATAACACATATCACTGCGAAACAAAAAACGGCTGTAAGCCTTGATTTTACTGGCTTTACGACCATTTTTTTGCTTTTCAACTGTCAAAGATGGGGAATGGAATGTAAAATGTGCGGGGAGGAATAAATATTGTAATTTGGATGGAAATCCGATATACTAAGTCAGAGGATAGCAAAGAATCAAAAGGATATTTTTAGTTATCCGTTATATTGGAGAAATCATGGAAAGAATAGCAGCAAGCGGAATACAGGCGTTACAGATTTTGCTTGAAAATAACGGCATTATTTTGGAATTGCATTTGAGGGGAAAAGGTACAGATTGAAGGAATAACTTGAGGGATAGAAAA AACAAAAGAAATAGATTTACCATAGTGTAAAAAATATAGCACAATAACACATATCACTGCGAAACAAAAAACGGCTGTAAGCCTTGATTTTACTGGCTTTACGACCATTTTTTTGCTTTTCAACTGTCAAAGATGGGGAATGGAATGTAAAATGTGCGGGGAGGAATAAATATTGTAATTTGGATGGAAATCCGATATACTAAGTCAGAGGATAGCAAAGAATCAAAAGGATATTTTTAGTTATCCGTTATATTGGAGAAATCATGGAAAGAATAGCAGCAAGCGGAATACAGGCGTTACAGATTTTGCTTGAAAATAACGGCATTATTTTGGAATTGCATTTGAGGGGAAAAGGTACAGATTGAAGGAATAACTTGAGGGATAGAAAATGAAAAACTACAAAAATGAAAAAAG TTTTCTATCCCTCAAGTTATTCCTTCAATCTGTACCTTTTCCCCTCAAATGCAATTCCAAAATAATGCCGTTATTTTCAAGCAAAATCTGTAACGCCTGTATTCCGCTTGCTGCTATTCTTTCCATGATTTCTCCAATATAACGGATAACTAAAAATATCCTT 163 TTerm_0730 NZ_LR027880.1 831286 831299 14 831307 831320 14 7 78 0 13 39 60 36 63 0 831302 CCCTGTTCTGCCTG CAGGTAAAGCAGGG True ATAAAAGTC GATATCAAT True False - CCCTGCTTTACCTG GAATTCA CAGGCAGAACAGGG GACTTTTAT 50 RIL182_RS04035 intergenic 831250 831470 + down ATAACAGCAGAGATTTCGCTTTAAAAAATAAAAGTCCCTGTTCTGCCTGTGAATTCCAGGTAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA TATGCGGGAGGAAGAGAAAGTGTAGATAACAGCAGAGATTTCGCTTTAAAAAATAAAAGTCCCTGTTCTGCCTGTGAATTCCAGGTAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA TATAAGTTAGCAGTTTCTTCAATGCTAATTTTTCATTCAGGACACCTTCTTTCGTATGTTTTGTTCCATAACATAATTATACAATAAAAGGTGTCCTTTTTGAGTGATTATACAGAAAAAAACAGTAATTTGATACCCAAAATTGATATCCCCTGCTTTACCTGGAATTCACAGGCAGAACAGG 184 TTerm_0731 NZ_LR027880.1 853192 853201 10 853211 853220 10 9 80 0 10 85 15 87 12 0 853205 AACATTTTTA TAAAGTTGTT True TTAGCCAAA AGAAAGAGA True False - AACAACTTTA GCCAAAACA TAAAAATGTT TTTGGCTAA 28 RIL182_RS04125 intergenic 853177 853238 + down ATTTTTTTAGCCAAAACATTTTTATGTTTTGGCTAAAGTTGTTAGAAAGAGAGTGTGAAGA GTTTATACCAGTAATTGAAGAATAGATTTTTTTAGCCAAAACATTTTTATGTTTTGGCTAAAGTTGTTAGAAAGAGAGTGTGAAGATGAAAAAATGTTTAGTATGTGGTTC TCTTCACACTCTCTTTCTAACAACTTTAGCCAAAACATAAAAATGT 46 TTerm_0732 NZ_LR027880.1 860623 860636 14 860641 860654 14 4 85 0 18 42 57 41 58 0 860638 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS04165 intergenic 860354 860653 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACCTTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCAACTGGAGTGTATTGCCACTACCTTTATCTGAATTGTTTATTAGCTGGATGTTGCCGGAGTGTTTTTCACTCAGAGTACTTATTTCTATCAAGTCTACGATGATAATCGTTGGTGGACATCATGGTATCAGACTTTAGGAAAGGGAGGTACAACCTCATGAAAATTTACGTAGGCATTGATA AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0733 NZ_LR027880.1 863327 863340 14 863345 863358 14 4 85 0 18 42 57 41 58 0 863342 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS04180 intergenic 863130 863357 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCGTAAGTACGTAATCATTCGTATCTGTCAGCAACTATATTTTTCTGATACACTCTTTTCATAACAAAGAAAGGAAACTGTATCATT GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACCTTTCTTTTAATATCGTGGTTCAATACAATTCAGATACTATGGACTTTTGATTTGTTTTCTGTAGCTTGACTACTCGTAAGTACGTAATCATTCGTATCTGTCAGCAACTATATTTTTCTGATACACTCTTTTCATAACAAAGAAAGGAAACTGTATCATTATGAAAACAGATGAAAAAATCACGC AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0734 NZ_LR027880.1 877014 877025 12 877031 877042 12 5 83 0 14 41 58 40 60 0 877027 TGCTGCTCACAC GTGTGAACGGCA True AAAATATTT GCAAAAACG True False - TGCCGTTCACAC GTACT GTGTGAGCAGCA AAATATTTT 52 RIL182_RS04230 intergenic 877004 877080 + down AAAAATATTTGCTGCTCACACAGTACGTGTGAACGGCAGCAAAAACGAAACAGAAAATTTCTACAGGAGGATGCGA GCAGTTTGCAGGTCTGCAGGAGTAAAAAAATATTTGCTGCTCACACAGTACGTGTGAACGGCAGCAAAAACGAAACAGAAAATTTCTACAGGAGGATGCGATGTTTTTAACCACACTTTGTTATAT TCGCATCCTCCTGTAGAAATTTTCTGTTTCGTTTTTGCTGCCGTTCACACGTACTGTGTGAGCAGC 66 TTerm_0735 NZ_LR027880.1 892165 892179 15 892187 892201 15 7 100 0 30 60 40 60 40 0 892182 ACAAAAGAAGCCTTC GAAGGCTTCTTTTGT True TTTGGGATA CAGGTAAAG True True - ACAAAAGAAGCCTTC TTTTTAT GAAGGCTTCTTTTGT TATCCCAAA 92 RIL182_RS04290 intergenic 892156 892224 + down TTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGTCAGGTAAAGACAGGCAGGGAGGT ATACAGAAAAAATGAAACATTTTAGTTTGGGATACAAAAGAAGCCTTCATAAAAAGAAGGCTTCTTTTGTCAGGTAAAGACAGGCAGGGAGGTTAGCCCATCGTTACTTCTACATTTA ACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTG 59 TTerm_0736 NZ_LR027880.1 892165 892179 15 892187 892201 15 7 100 0 30 60 40 60 40 0 892182 ACAAAAGAAGCCTTC GAAGGCTTCTTTTGT True TTTGGGATA CAGGTAAAG True True - ACAAAAGAAGCCTTC TTTTTAT GAAGGCTTCTTTTGT TATCCCAAA 92 RIL182_RS04295 intergenic 892156 892224 - down ACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTGTATCCCAAA TAAATGTAGAAGTAACGATGGGCTAACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTGTATCCCAAACTAAAATGTTTCATTTTTTCTGTAT ACCTCCCTGCCTGTCTTTACCTGACAAAAGAAGCCTTCTTTTTATGAAGGCTTCTTTTG 59 TTerm_0737 NZ_LR027880.1 910761 910773 13 910780 910792 13 6 100 0 26 69 30 69 30 0 910776 AAAAGACGTCTAA TTAGACGTCTTTT True GATGATACA TTTATTCAT True True - AAAAGACGTCTAA TATCAC TTAGACGTCTTTT TGTATCATC 68 RIL182_RS04335 intergenic 910728 910865 + down AAATCATTATAAAAATTAAATAAAGATGATACAAAAGACGTCTAAGTGATATTAGACGTCTTTTTTTATTCATAGGGTATTGAAAGCAAAAGGTGACTTTTAAACCAATTAAAAAAGTAACAGGAAAGGAGCATTTA GAATTACATCAATATTGAAGAGTAAAAATCATTATAAAAATTAAATAAAGATGATACAAAAGACGTCTAAGTGATATTAGACGTCTTTTTTTATTCATAGGGTATTGAAAGCAAAAGGTGACTTTTAAACCAATTAAAAAAGTAACAGGAAAGGAGCATTTATGGAAGAAAAGTATCAGTTAAAAGA TAAATGCTCCTTTCCTGTTACTTTTTTAATTGGTTTAAAAGTCACCTTTTGCTTTCAATACCCTATGAATAAAAAAAGACGTCTAATATCACTTAGACGTCTTT 104 TTerm_0738 NZ_LR027880.1 912605 912610 6 912617 912622 6 6 100 0 12 50 50 50 50 0 912613 TGCACA TGTGCA True TTATAAAAT GCAAAGCTG True False - TGCACA CAATCC TGTGCA ATTTTATAA 48 RIL182_RS04350 intergenic 912558 912707 + down TGTATCCGGTTGATTTTCCCAGATAAACATGTTAAATTTTATAAAATGCACAGGATTGTGTGCAGCAAAGCTGTGTAAAGTGGAAAACGGCATGAAAAAATAAGAATTTTGTGAAAAATAAGACTTTTGTACAAAAGAGAGGATTGACA AAATTTAGGATCGTGTGATTCGTGATGTATCCGGTTGATTTTCCCAGATAAACATGTTAAATTTTATAAAATGCACAGGATTGTGTGCAGCAAAGCTGTGTAAAGTGGAAAACGGCATGAAAAAATAAGAATTTTGTGAAAAATAAGACTTTTGTACAAAAGAGAGGATTGACATGAAATACGAAAATTACATATTTGA TGTCAATCCTCTCTTTTGTACAAAAGTCTTATTTTTCACAAAATTCTTATTTTTTCATGCCGTTTTCCACTTTACACAGCTTTGCTGCACACAATCCTGTGC 102 TTerm_0739 NZ_LR027880.1 918896 918914 19 918923 918941 19 8 84 0 23 71 28 75 25 0 918918 AAAAGGGGGTGTGAAAAAT ATTTTTCATACTTCCTTTT True TAAATGAGA TCTGGTTAA True True - AAAAGGAAGTATGAAAAAT AAAAAATC ATTTTTCACACCCCCTTTT TCTCATTTA 46 RIL182_RS04380 intergenic 918848 919069 + down ATCAATAAAATAAATGTTTTGGGAACCTTTCTGTCACCCTAAATGAGAAAAGGGGGTGTGAAAAATGATTTTTTATTTTTCATACTTCCTTTTTCTGGTTAAATGAAAAAATATACTGTATATTGTCGAATTTTGAGTTATAATAGATAATAAGTTTGTATTCAGGCTTGTCAGGAATGAGAATATTGTTTTTATAAAAAAGCACGAAATGGGGAATGGTA AGATTTAGCAGAGATCCTTGGATAAATCAATAAAATAAATGTTTTGGGAACCTTTCTGTCACCCTAAATGAGAAAAGGGGGTGTGAAAAATGATTTTTTATTTTTCATACTTCCTTTTTCTGGTTAAATGAAAAAATATACTGTATATTGTCGAATTTTGAGTTATAATAGATAATAAGTTTGTATTCAGGCTTGTCAGGAATGAGAATATTGTTTTTATAAAAAAGCACGAAATGGGGAATGGTATGGAAAGAATCTGGAATTTTTTTGA TACCATTCCCCATTTCGTGCTTTTTTATAAAAACAATATTCTCATTCCTGACAAGCCTGAATACAAACTTATTATCTATTATAACTCAAAATTCGACAATATACAGTATATTTTTTCATTTAACCAGAAAAAGGAAGTATGAAAAATAAAAAATCATTTTTCACACCCCCTTT 173 TTerm_0740 NZ_LR027880.1 932880 932885 6 932890 932895 6 4 100 0 12 50 50 50 50 0 932887 TCTGCT AGCAGA True GAAAATCCT TAAATTTTA True True - TCTGCT GACG AGCAGA AGGATTTTC 48 RIL182_RS04440 intergenic 932537 932952 + down TCTGTGGCAGACCTCTTTGATGCAGTCGTTTAAACAATAGGGAAGTATGTGAACGGTCGATCTGCGAGGCATTAAAAGCCGGATACCGGTTGATTGACATGGTGGAAGCATATGGAAATGAAAGAGCGGGCAGGCAATGACCTGGTAAAAAGAATCTTTTACGCCATGTTTTGTGTACAATGCATAAAAATATGGCGTTTATTTTGTCTAAAACTTCCAACATGCAAAACAGTTTATGCAAAAAAAGTGCAGATTGTGAAGATTTTTACCAAAGGACGTGTGGTATGGTAGGATACAGTTACAAGATCCGAAACGGATAAAGAAAACAAGGGAGGAAAATCCTCTGCTCGTCAGCAGATAAATTTTACATTGTAAAATTGCATTTTCCTTCGGAAAACAAGGGAGGATTTAGAAA CCTGATCCCGATGCGGGAAAACTGATCTGTGGCAGACCTCTTTGATGCAGTCGTTTAAACAATAGGGAAGTATGTGAACGGTCGATCTGCGAGGCATTAAAAGCCGGATACCGGTTGATTGACATGGTGGAAGCATATGGAAATGAAAGAGCGGGCAGGCAATGACCTGGTAAAAAGAATCTTTTACGCCATGTTTTGTGTACAATGCATAAAAATATGGCGTTTATTTTGTCTAAAACTTCCAACATGCAAAACAGTTTATGCAAAAAAAGTGCAGATTGTGAAGATTTTTACCAAAGGACGTGTGGTATGGTAGGATACAGTTACAAGATCCGAAACGGATAAAGAAAACAAGGGAGGAAAATCCTCTGCTCGTCAGCAGATAAATTTTACATTGTAAAATTGCATTTTCCTTCGGAAAACAAGGGAGGATTTAGAAATGTTAGCAATTAACATGGATGACGT TTTCTAAATCCTCCCTTGTTTTCCGAAGGAAAATGCAATTTTACAATGTAAAATTTATCTGCTGACGAGCAG 72 TTerm_0741 NZ_LR027880.1 936501 936521 21 936526 936546 21 4 80 0 22 66 33 70 29 0 936523 AAAAAGCATGTTTTACGATTC GAATTGCAGAGCATGCTTTTT True GCACATATA TTGTTGTAT True True - AAAAAGCATGCTCTGCAATTC TTTT GAATCGTAAAACATGCTTTTT TATATGTGC 60 RIL182_RS04455 intergenic 936466 936655 + down AAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAG CCCGGAAGGGGAAGCGAAAGCGTAAAAAATAGTATGTGAAAAACGAAATAAGCACATATAAAAAGCATGTTTTACGATTCAAAAGAATTGCAGAGCATGCTTTTTTTGTTGTATTTTAAATAGGAATAGGATTCACATATTGACAAACAAAACAGAAATGTTTATATTTATAACAGCGTTATATAACACTGTTATAAATGAGTGGAGGAACCAGTGACAAAACAAGTAGAAGGAGTTTC CTGGTTCCTCCACTCATTTATAACAGTGTTATATAACGCTGTTATAAATATAAACATTTCTGTTTTGTTTGTCAATATGTGAATCCTATTCCTATTTAAAATACAACAAAAAAAGCATGCTCTGCAATTCTTTTGAATCGTAAAACATGCTTTT 154 TTerm_0742 NZ_LR027880.1 945610 945628 19 945635 945653 19 6 89 0 28 57 42 58 41 0 945631 AAAAACACCATGGACATGC GCATGTTCGTGGTGTTTTT True TTGTTATGA GGTTATACT True True - AAAAACACCACGAACATGC GATTTT GCATGTCCATGGTGTTTTT TCATAACAA 80 RIL182_RS04495 intergenic 945543 945762 + down GTAGTTGCGTCAGGGTTTCCGATGAAAAAACAGATTGCACGCACTACGGGCAGACTGATTGTTATGAAAAACACCATGGACATGCAAAATCGCATGTTCGTGGTGTTTTTGGTTATACTAAAAATAAGTGACAGGTCAGGTGTCCTGTGTTAATATGGAACAGAAAGAACGGAATGTAACACGCCAGACCGGCGTCGTTCTGAAAATGGAGGACGACTA TGGCTGGACAGTAGAGGTAAAATAAGTAGTTGCGTCAGGGTTTCCGATGAAAAAACAGATTGCACGCACTACGGGCAGACTGATTGTTATGAAAAACACCATGGACATGCAAAATCGCATGTTCGTGGTGTTTTTGGTTATACTAAAAATAAGTGACAGGTCAGGTGTCCTGTGTTAATATGGAACAGAAAGAACGGAATGTAACACGCCAGACCGGCGTCGTTCTGAAAATGGAGGACGACTATGAGTAAAACATTAGAACAATTCGA TAGTCGTCCTCCATTTTCAGAACGACGCCGGTCTGGCGTGTTACATTCCGTTCTTTCTGTTCCATATTAACACAGGACACCTGACCTGTCACTTATTTTTAGTATAACCAAAAACACCACGAACATGCGATTTTGCATGTCCATGGTGTTTT 152 TTerm_0743 NZ_LR027880.1 960163 960182 20 960191 960210 20 8 85 0 25 60 40 58 41 0 960186 AAACATCAGAGGCATCAAGA TCTTGACGCCTCTGTTTTTT True AGCAGTAAA GCCCCAGAA True True - AAAAAACAGAGGCGTCAAGA TTCTTGTC TCTTGATGCCTCTGATGTTT TTTACTGCT 66 RIL182_RS04540 intergenic 960155 960325 + down GCAGTAAAAACATCAGAGGCATCAAGAGACAAGAATCTTGACGCCTCTGTTTTTTGCCCCAGAATCTTTGTCATACATTGTTGACAAGGAAACAAACTTGCGCTATATTAAAACAGAAGTAATTGTTGACAAGGAAACAATATTTGCTTTTATGTAAGGGAGTGGATGTA GGCAGGATTTCACTTTGACGCGTAAGCAGTAAAAACATCAGAGGCATCAAGAGACAAGAATCTTGACGCCTCTGTTTTTTGCCCCAGAATCTTTGTCATACATTGTTGACAAGGAAACAAACTTGCGCTATATTAAAACAGAAGTAATTGTTGACAAGGAAACAATATTTGCTTTTATGTAAGGGAGTGGATGTATGAAAGAGCAGGAACTTCTGTTAAA TACATCCACTCCCTTACATAAAAGCAAATATTGTTTCCTTGTCAACAATTACTTCTGTTTTAATATAGCGCAAGTTTGTTTCCTTGTCAACAATGTATGACAAAGATTCTGGGGCAAAAAACAGAGGCGTCAAGATTCTTGTCTCTTGATGCCTCTGATGTT 162 TTerm_0744 NZ_LR027880.1 960850 960855 6 960860 960865 6 4 100 0 12 50 50 50 50 0 960857 ATTGCC GGCAAT True ACATAAAAA CCGCAGGCA True False - ATTGCC CGCA GGCAAT TTTTTATGT 48 RIL182_RS04545 intergenic 960780 960884 + down CGATGTAGGAAAGTATGAAACAGTTACGGATCAGACAGAAGTTTTGAGATCCATAGGATCGACATAAAAATTGCCTGCGGGCAATCCGCAGGCAACAGGATATT GGGACAGATTGAAGAATTATCATAACGATGTAGGAAAGTATGAAACAGTTACGGATCAGACAGAAGTTTTGAGATCCATAGGATCGACATAAAAATTGCCTGCGGGCAATCCGCAGGCAACAGGATATTTAAGATTCACTGTCAGTGTCTGTAC AATATCCTGTTGCCTGCGGATTGCCCGCAGGCAA 34 TTerm_0745 NZ_LR027880.1 960850 960855 6 960860 960865 6 4 100 0 12 50 50 50 50 0 960857 ATTGCC GGCAAT True ACATAAAAA CCGCAGGCA True False - ATTGCC CGCA GGCAAT TTTTTATGT 48 RIL182_RS04550 intergenic 960780 960884 - down AATATCCTGTTGCCTGCGGATTGCCCGCAGGCAATTTTTATGTCGATCCTATGGATCTCAAAACTTCTGTCTGATCCGTAACTGTTTCATACTTTCCTACATCG GTACAGACACTGACAGTGAATCTTAAATATCCTGTTGCCTGCGGATTGCCCGCAGGCAATTTTTATGTCGATCCTATGGATCTCAAAACTTCTGTCTGATCCGTAACTGTTTCATACTTTCCTACATCGTTATGATAATTCTTCAATCTGTCCC AATATCCTGTTGCCTGCGGATTGCCCGCAGGCAA 34 TTerm_0746 NZ_LR027880.1 960851 960860 10 960866 960875 10 5 100 0 20 30 70 30 70 0 960862 TTGCCTGCGG CCGCAGGCAA True CATAAAAAT CAGGATATT True False - TTGCCTGCGG ATTGC CCGCAGGCAA ATTTTTATG 80 RIL182_RS04545 intergenic 960780 960884 + down CGATGTAGGAAAGTATGAAACAGTTACGGATCAGACAGAAGTTTTGAGATCCATAGGATCGACATAAAAATTGCCTGCGGGCAATCCGCAGGCAACAGGATATT GGGACAGATTGAAGAATTATCATAACGATGTAGGAAAGTATGAAACAGTTACGGATCAGACAGAAGTTTTGAGATCCATAGGATCGACATAAAAATTGCCTGCGGGCAATCCGCAGGCAACAGGATATTTAAGATTCACTGTCAGTGTCTGTAC AATATCCTGTTGCCTGCGGATTGCCCGCAGGCA 33 TTerm_0747 NZ_LR027880.1 960851 960860 10 960866 960875 10 5 100 0 20 30 70 30 70 0 960862 TTGCCTGCGG CCGCAGGCAA True CATAAAAAT CAGGATATT True False - TTGCCTGCGG ATTGC CCGCAGGCAA ATTTTTATG 80 RIL182_RS04550 intergenic 960780 960884 - down AATATCCTGTTGCCTGCGGATTGCCCGCAGGCAATTTTTATGTCGATCCTATGGATCTCAAAACTTCTGTCTGATCCGTAACTGTTTCATACTTTCCTACATCG GTACAGACACTGACAGTGAATCTTAAATATCCTGTTGCCTGCGGATTGCCCGCAGGCAATTTTTATGTCGATCCTATGGATCTCAAAACTTCTGTCTGATCCGTAACTGTTTCATACTTTCCTACATCGTTATGATAATTCTTCAATCTGTCCC AATATCCTGTTGCCTGCGGATTGCCCGCAGGCA 33 TTerm_0748 NZ_LR027880.1 970252 970259 8 970265 970272 8 5 87 0 11 81 18 85 14 0 970261 ATATAGTA TACTACAT True TACAAAAGA GTAAAAATA True False - ATGTAGTA TTTGT TACTATAT TCTTTTGTA 38 RIL182_RS04590 intergenic 970050 970315 + down AAAAGAATAGAGTTACAGAGGACTGCCGCCCGGATGAATAAGATTCTGCGGGCGGCAGTTTTTTGATATCCGAATCTTCATAGGAAAATGCGTTCTGCAAATTTGTGTAAACCTCCCAAAAACCTGCAAAAATTGAGAAAAAATGTAGCATAAATATAATTGACATAATGTATAATAAGTAGTAGTATCAAAATACAAAAGATATAGTAACAAATACTACATGTAAAAATAATAAATACTATTTTGCTAAAAGGAGGTCATATTA AACCGTAAATAACTGCGAATTATAAAAAAGAATAGAGTTACAGAGGACTGCCGCCCGGATGAATAAGATTCTGCGGGCGGCAGTTTTTTGATATCCGAATCTTCATAGGAAAATGCGTTCTGCAAATTTGTGTAAACCTCCCAAAAACCTGCAAAAATTGAGAAAAAATGTAGCATAAATATAATTGACATAATGTATAATAAGTAGTAGTATCAAAATACAAAAGATATAGTAACAAATACTACATGTAAAAATAATAAATACTATTTTGCTAAAAGGAGGTCATATTATGTTACAGATAGGGATTCGTGAACC TAATATGACCTCCTTTTAGCAAAATAGTATTTATTATTTTTACATGTAGTATTTGTTACTATA 63 TTerm_0749 NZ_LR027880.1 974347 974352 6 974362 974367 6 9 100 0 12 66 33 66 33 0 974356 GCATAT ATATGC True AAAATTGTG CATCATGGC True False - GCATAT CCGGCACTC ATATGC CACAATTTT 40 RIL182_RS04615 intergenic 974300 974587 + down GATTTGAGCTGGTACAGCCGGGCATGCATAGCATGGTAAAAATTGTGCATATGAGTGCCGGATATGCCATCATGGCATCATACAAAATGACTGTGTGATACAACGATGAAAATCATACGGTCGGATATAAGTGAAATCTGCAAACGACCGTTCGCATAGCGTGCGGTCATTTGTACGTTTTATCGGCAACATTAAAATGCCGTAATACTTGAAAAAAATACATTGATTTGCAGAAAACTTTAAATGTTTTGCTGTAAAATCAGATAGAAAGAGAGGAAATATTATAG AAACCAGAGCTGCGAGCACAAATAAGATTTGAGCTGGTACAGCCGGGCATGCATAGCATGGTAAAAATTGTGCATATGAGTGCCGGATATGCCATCATGGCATCATACAAAATGACTGTGTGATACAACGATGAAAATCATACGGTCGGATATAAGTGAAATCTGCAAACGACCGTTCGCATAGCGTGCGGTCATTTGTACGTTTTATCGGCAACATTAAAATGCCGTAATACTTGAAAAAAATACATTGATTTGCAGAAAACTTTAAATGTTTTGCTGTAAAATCAGATAGAAAGAGAGGAAATATTATAGTGGTTCATCAGTATAAGAACAACGG CTATAATATTTCCTCTCTTTCTATCTGATTTTACAGCAAAACATTTAAAGTTTTCTGCAAATCAATGTATTTTTTTCAAGTATTACGGCATTTTAATGTTGCCGATAAAACGTACAAATGACCGCACGCTATGCGAACGGTCGTTTGCAGATTTCACTTATATCCGACCGTATGATTTTCATCGTTGTATCACACAGTCATTTTGTATGATGCCATGATGGCATATCCGGCACTCATATG 240 TTerm_0750 NZ_LR027880.1 978165 978176 12 978183 978194 12 6 91 0 19 45 54 45 54 0 978179 AAAGTCCTGGCA TGCCGGGACTTT True GAAAAGTGA TAAGATTCA True True - AAAGTCCCGGCA AATAAC TGCCAGGACTTT TCACTTTTC 78 RIL182_RS04625 intergenic 978145 978220 + down GATCTGTTGAAGAAAAGTGAAAGTCCTGGCAGTTATTTGCCGGGACTTTTAAGATTCATAGGAAATTACGTCCTA TGGTAAAAATAAAATAACAGAATAAGATCTGTTGAAGAAAAGTGAAAGTCCTGGCAGTTATTTGCCGGGACTTTTAAGATTCATAGGAAATTACGTCCTATGAATCTTAAAGCCCTCCGGGCGGG TAGGACGTAATTTCCTATGAATCTTAAAAGTCCCGGCAAATAACTGCCAGGACTT 55 TTerm_0751 NZ_LR027880.1 980036 980053 18 980060 980077 18 6 94 0 31 63 36 64 35 0 980056 AAAAAATGAGGAACCTGT ACAGGTTCCTCGTTTTTT True TAATGAATA GTGCTTTTT True True - AAAAAACGAGGAACCTGT CACGAA ACAGGTTCCTCATTTTTT TATTCATTA 86 RIL182_RS04635 intergenic 980005 980094 + down AAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTTGTGCTTTTTGAGTTTGT AGAGAAATATCCGCTGGAGAGATAAAAGAGAATAGAATATAATTTAATAATGAATAAAAAATGAGGAACCTGTTTCGTGACAGGTTCCTCGTTTTTTGTGCTTTTTGAGTTTGTTATTTTATATCATCTGCAATACGGT ACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTT 58 TTerm_0752 NZ_LR027880.1 980036 980053 18 980060 980077 18 6 94 0 31 63 36 64 35 0 980056 AAAAAATGAGGAACCTGT ACAGGTTCCTCGTTTTTT True TAATGAATA GTGCTTTTT True True - AAAAAACGAGGAACCTGT CACGAA ACAGGTTCCTCATTTTTT TATTCATTA 86 RIL182_RS04640 intergenic 980005 980094 - down ACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTTTATTCATTATTAAATTATATTCTATTCTCTT ACCGTATTGCAGATGATATAAAATAACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTTTATTCATTATTAAATTATATTCTATTCTCTTTTATCTCTCCAGCGGATATTTCTCT ACAAACTCAAAAAGCACAAAAAACGAGGAACCTGTCACGAAACAGGTTCCTCATTTTT 58 TTerm_0753 NZ_LR027880.1 991552 991566 15 991576 991590 15 9 100 0 30 73 26 73 26 0 991570 AAAAAAGCTTACATG CATGTAAGCTTTTTT True TGAGATCAA ACGCTTTCA True True - AAAAAAGCTTACATG CCCTTTTGA CATGTAAGCTTTTTT TTGATCTCA 76 RIL182_RS04685 intergenic 991532 991690 + down GAACGGAAAAGTGAGATCAAAAAAAGCTTACATGTCAAAAGGGCATGTAAGCTTTTTTACGCTTTCAAGTACGAAAGTACGATTGACGGGGATAAACTGTTACATTAACATAAAAAATGCGCGTGACAATGTGCAATAAATCAGAAGGAGAAAAGTTA AGATGTAAAAGTTACAAAGTGTTAAGAACGGAAAAGTGAGATCAAAAAAAGCTTACATGTCAAAAGGGCATGTAAGCTTTTTTACGCTTTCAAGTACGAAAGTACGATTGACGGGGATAAACTGTTACATTAACATAAAAAATGCGCGTGACAATGTGCAATAAATCAGAAGGAGAAAAGTTATGAAAAGAAAGAGACTCACGGGTTG TAACTTTTCTCCTTCTGATTTATTGCACATTGTCACGCGCATTTTTTATGTTAATGTAACAGTTTATCCCCGTCAATCGTACTTTCGTACTTGAAAGCGTAAAAAAGCTTACATGCCCTTTTGACATGTAAGCTTTTT 138 TTerm_0754 NZ_LR027880.1 995523 995538 16 995544 995559 16 5 93 0 27 59 40 60 40 0 995540 AAAAACCGGAAGAAGC GCTTTTTCCGGTTTTT True ATAATAATA GTCATAGAA True True - AAAAACCGGAAAAAGC AATCC GCTTCTTCCGGTTTTT TATTATTAT 70 RIL182_RS04695 intergenic 995507 995635 + down TTTTGCAATAATAATAAAAACCGGAAGAAGCGGATTGCTTTTTCCGGTTTTTGTCATAGAAAGTAAGTTGCTTTTTACAGATAAAGTAAGTATACTGATAAACAATAAAAAGAGATGGAGAAGGAATA AGTGAAAATTAAAGTAAAAAAATAATTTTGCAATAATAATAAAAACCGGAAGAAGCGGATTGCTTTTTCCGGTTTTTGTCATAGAAAGTAAGTTGCTTTTTACAGATAAAGTAAGTATACTGATAAACAATAAAAAGAGATGGAGAAGGAATATGCCGAAGGGAAAAACAACAGTATT TATTCCTTCTCCATCTCTTTTTATTGTTTATCAGTATACTTACTTTATCTGTAAAAAGCAACTTACTTTCTATGACAAAAACCGGAAAAAGCAATCCGCTTCTTCCGGTTTT 112 TTerm_0755 NZ_LR027880.1 999638 999643 6 999648 999653 6 4 100 0 12 66 33 66 33 0 999645 GGTAAA TTTACC True AACAAAACG AAACGCGTT True False - GGTAAA TTTC TTTACC CGTTTTGTT 40 RIL182_RS04715 intergenic 999420 999715 + down TTCACTGGAAAATCCAGTGTAAGTCATGAAACGTTTTTGGAAAGTGCAGAATGGTAAAAGCCATAAATCGCCTTTTAAAATGTAAATTGACGCAGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGAG AAGAGTTCGAATCTCTCCATCTCCATTCACTGGAAAATCCAGTGTAAGTCATGAAACGTTTTTGGAAAGTGCAGAATGGTAAAAGCCATAAATCGCCTTTTAAAATGTAAATTGACGCAGAAGTTGCGAAGCAACTTCTAATGGCTCTGCGAAGCAGAGACTATTGGTACCTTGAAAACTTCATACAGAGATTGATAAAAGATTTTTATCAAGACATCCGAGAAAATAAACCATAACAAAACGGTAAAGAAATTTACCAAACGCGTTTTTAAAACGCAAGACCCTGTATTTCAACGCTATGAAATACAGCTAGTTAAGAGGTCAAGCAAGAAAGAGCGCAGGGTG CTCTTAACTAGCTGTATTTCATAGCGTTGAAATACAGGGTCTTGCGTTTTAAAAACGCGTTTGGTAAATTTCTTTAC 77 TTerm_0756 NZ_LR027880.1 1003042 1003049 8 1003057 1003064 8 7 87 0 11 87 12 85 14 0 1003052 CTATATAA TTATAAAG True AAAAGTACC AAAGATACA True False - CTTTATAA GTAGAAT TTATATAG GGTACTTTT 22 RIL182_RS04725 intergenic 1002865 1003256 + down CTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGA GGGAGTTCGATTCTCTCATCCCCTGCTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGATGGAGGCAAAAAAGCTGACAACGGA TCCCGCATCTGCTGCATCTGTTACCATACAGTGGAACATTACATTGTCTGCACCAGTATATCGTAGACTGCACGTCCGCCCTGCCTCCACAGCACTGACATGTACTTGTCTCGCATACGGTTCCAAAACATGGCTGTTTTTCTTTTGTTTTTTCATTTCTATTGTGGCAAATATATGTTATCATGTATCTTTCTTTATAAGTAGAATTTATATA 214 TTerm_0757 NZ_LR027880.1 1003117 1003122 6 1003127 1003132 6 4 100 0 12 83 16 83 16 0 1003124 AAAACA TGTTTT True ACAAAAGAA GGAACCGTA True False - AAAACA TGGC TGTTTT TTCTTTTGT 32 RIL182_RS04725 intergenic 1002865 1003256 + down CTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGA GGGAGTTCGATTCTCTCATCCCCTGCTTGGAAGAAGCCTTGAACGGAAGTTCAAGGCTTTTTTGATATATTTACAGTTTTGCATTTTTACTTATTTTGCCTGAAATTATAAAATCTTTCTTTTCTGGATAATATCTGATTGAAATTCTCTTAAACTAAGAATATAATATCATTATATATTCTTAAATTCTAAGAAAAGTACCTATATAAATTCTACTTATAAAGAAAGATACATGATAACATATATTTGCCACAATAGAAATGAAAAAACAAAAGAAAAACAGCCATGTTTTGGAACCGTATGCGAGACAAGTACATGTCAGTGCTGTGGAGGCAGGGCGGACGTGCAGTCTACGATATACTGGTGCAGACAATGTAATGTTCCACTGTATGGTAACAGATGCAGCAGATGCGGGATGGAGGCAAAAAAGCTGACAACGGA TCCCGCATCTGCTGCATCTGTTACCATACAGTGGAACATTACATTGTCTGCACCAGTATATCGTAGACTGCACGTCCGCCCTGCCTCCACAGCACTGACATGTACTTGTCTCGCATACGGTTCCAAAACATGGCTGTTT 139 TTerm_0758 NZ_LR027880.1 1015513 1015523 11 1015528 1015538 11 4 100 0 22 63 36 63 36 0 1015525 TAATCCCATTC GAATGGGATTA True AAAAGCTCT TCTTTTATA True True - TAATCCCATTC CGAA GAATGGGATTA AGAGCTTTT 68 RIL182_RS04760 intergenic 1015366 1015665 + down TAATTTTACATGATTTTTGAAGGAAAAATGTAAAAAATCAAAAACAGGTATTTACAATCGTCGAAAACAGGGGTATAATCTAAGAGAATTATATCATACCAAGTGATAATTAGGTTATTACAATAAGGTAAGAAACCTAAAAGCTCTAATCCCATTCTTCGGAATGGGATTATCTTTTATACAGAAGTTTATTCATGACAATGACCGGTATGCGGATCATTGTTGAAGCGCGCAGAATAAAACAGTTGTCCCGTTTGCTGGTATGAGAGAGAACGGTTCAGATGAGAGGAGAAGGAACA TTATGGTTTACAGGATATGGAATAATAATTTTACATGATTTTTGAAGGAAAAATGTAAAAAATCAAAAACAGGTATTTACAATCGTCGAAAACAGGGGTATAATCTAAGAGAATTATATCATACCAAGTGATAATTAGGTTATTACAATAAGGTAAGAAACCTAAAAGCTCTAATCCCATTCTTCGGAATGGGATTATCTTTTATACAGAAGTTTATTCATGACAATGACCGGTATGCGGATCATTGTTGAAGCGCGCAGAATAAAACAGTTGTCCCGTTTGCTGGTATGAGAGAGAACGGTTCAGATGAGAGGAGAAGGAACATGGACGAAAAAATGGATTATCGTAT TGTTCCTTCTCCTCTCATCTGAACCGTTCTCTCTCATACCAGCAAACGGGACAACTGTTTTATTCTGCGCGCTTCAACAATGATCCGCATACCGGTCATTGTCATGAATAAACTTCTGTATAAAAGATAATCCCATTCCGAAGAATGGGATT 152 TTerm_0759 NZ_LR027880.1 1027783 1027795 13 1027801 1027813 13 5 100 0 26 53 46 53 46 0 1027797 AAAAAGGTTCCGG CCGGAACCTTTTT True AAGAATCAA GTGTAAAAA True True - AAAAAGGTTCCGG TACAT CCGGAACCTTTTT TTGATTCTT 84 RIL182_RS04795 intergenic 1027727 1027825 + down CACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTTGTGTAAAAAAGT GATCGCAGAGGGAGAGGCAGATTAACACAGTTTAAAATCAAAGAATGAGAGGTTTGAGAACTGTGTGTTGTCAAGAATCAAAAAAGGTTCCGGATGTACCGGAACCTTTTTGTGTAAAAAAGTTATTCTTCTGTGCTGAGCGTATCCA ACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTT 42 TTerm_0760 NZ_LR027880.1 1027783 1027795 13 1027801 1027813 13 5 100 0 26 53 46 53 46 0 1027797 AAAAAGGTTCCGG CCGGAACCTTTTT True AAGAATCAA GTGTAAAAA True True - AAAAAGGTTCCGG TACAT CCGGAACCTTTTT TTGATTCTT 84 RIL182_RS04800 intergenic 1027727 1027825 - down ACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTTTTGATTCTTGACAACACACAGTTCTCAAACCTCTCATTCTTTGATTTTAAACTGTG TGGATACGCTCAGCACAGAAGAATAACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTTTTGATTCTTGACAACACACAGTTCTCAAACCTCTCATTCTTTGATTTTAAACTGTGTTAATCTGCCTCTCCCTCTGCGATC ACTTTTTTACACAAAAAGGTTCCGGTACATCCGGAACCTTTT 42 TTerm_0761 NZ_LR027880.1 1039792 1039808 17 1039816 1039832 17 7 100 0 34 64 35 64 35 0 1039811 AAAAAGAGTCATAACCG CGGTTATGACTCTTTTT True TTTGAATGA AAAACGAAT True True - AAAAAGAGTCATAACCG ATTTTGC CGGTTATGACTCTTTTT TCATTCAAA 92 RIL182_RS04850 intergenic 1039737 1039871 + down AGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTTAAAACGAATCAAATATTCAGGAAACATAACGTTTGTATT AGCCGGATGTGCGTGTGAGCTGTAAAGGTTCAGATAGAGTGAAAATCAGAAAAATTTAGAGGCTCTCCAAATTTGAATGAAAAAGAGTCATAACCGGCAAAATCGGTTATGACTCTTTTTAAAACGAATCAAATATTCAGGAAACATAACGTTTGTATTTAGATCTGGTGAAGTTTGCGCTCAT AATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTT 79 TTerm_0762 NZ_LR027880.1 1039792 1039808 17 1039816 1039832 17 7 100 0 34 64 35 64 35 0 1039811 AAAAAGAGTCATAACCG CGGTTATGACTCTTTTT True TTTGAATGA AAAACGAAT True True - AAAAAGAGTCATAACCG ATTTTGC CGGTTATGACTCTTTTT TCATTCAAA 92 RIL182_RS04855 intergenic 1039737 1039871 - down AATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTTTCATTCAAATTTGGAGAGCCTCTAAATTTTTCTGATTTTCACTCTATCTGAACCT ATGAGCGCAAACTTCACCAGATCTAAATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTTTCATTCAAATTTGGAGAGCCTCTAAATTTTTCTGATTTTCACTCTATCTGAACCTTTACAGCTCACACGCACATCCGGCT AATACAAACGTTATGTTTCCTGAATATTTGATTCGTTTTAAAAAGAGTCATAACCGATTTTGCCGGTTATGACTCTTTT 79 TTerm_0763 NZ_LR027880.1 1042758 1042772 15 1042782 1042796 15 9 100 0 30 46 53 46 53 0 1042776 AAAAAGCTCCTGCGC GCGCAGGAGCTTTTT True CAAAGCAAA GCTGCCAAT True True - AAAAAGCTCCTGCGC TTGGTTAAT GCGCAGGAGCTTTTT TTTGCTTTG 100 RIL182_RS04860 intergenic 1042724 1042820 + down TGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGAT GGACGGAAGTCAGCCACAGGGATGATGAAAACAATTTAACAGATACAGGTCAAAGCAAAAAAAGCTCCTGCGCATTAACCAAGCGCAGGAGCTTTTTGCTGCCAATGGATTGATAAACGATCAATAACGTTTTATGGAAGGTTTAG ATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTT 62 TTerm_0764 NZ_LR027880.1 1042758 1042772 15 1042782 1042796 15 9 100 0 30 46 53 46 53 0 1042776 AAAAAGCTCCTGCGC GCGCAGGAGCTTTTT True CAAAGCAAA GCTGCCAAT True True - AAAAAGCTCCTGCGC TTGGTTAAT GCGCAGGAGCTTTTT TTTGCTTTG 100 RIL182_RS04865 intergenic 1042724 1042820 - down ATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCA CTAAACCTTCCATAAAACGTTATTGATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTTTTTGCTTTGACCTGTATCTGTTAAATTGTTTTCATCATCCCTGTGGCTGACTTCCGTCC ATCGTTTATCAATCCATTGGCAGCAAAAAGCTCCTGCGCTTGGTTAATGCGCAGGAGCTTTT 62 TTerm_0765 NZ_LR027880.1 1051514 1051539 26 1051549 1051575 27 9 85 3 27 75 24 73 26 0 1051543 TAAAATAAAAAATTCCGGCATCTATT AATAGATGACCGGAGTTTTTTTATTTA True TGTGGTTCT TGGCGGATT True True - TAAATAAAAAAACTCCGGTCATCTATT CAATTACTA AATAGATGCCGGAATTTTTTATTTTA AGAACCACA 62 RIL182_RS21610 intergenic 1051501 1051575 + down TATTTGTGGTTCTAAAATAAAAAATTCCGGCATCTATTTAGTAATTGAATAGATGACCGGAGTTTTTTTATTTA TGTACAGAAATTCGAATTAGAATAATATTTGTGGTTCTAAAATAAAAAATTCCGGCATCTATTTAGTAATTGAATAGATGACCGGAGTTTTTTTATTTATGGCGGATTGCAGGGAACAGGTGTA TAAATAAAAAAACTCCGGTCATCTATTCAATTACTAAATAGATGCCGGAATTTTTTATTTT 61 TTerm_0766 NZ_LR027880.1 1054161 1054177 17 1054182 1054198 17 4 82 0 19 50 50 50 50 0 1054179 AATAAAAGCGTCAGGGC GCTCTGGCGCTTTTGTT True TAGCGAAAA ATGCCCGGT True True - AACAAAAGCGCCAGAGC CTAA GCCCTGACGCTTTTATT TTTTCGCTA 70 RIL182_RS04925 intergenic 1054077 1054493 + down CTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTTATGCCCGGTCGTCTCTCGATAGGGCTCGAGAAATAGAGCCTGCTCAGCTCGGCAGCTATCACCGTTCCTCTCTGGCCTCCTCGGCCGCGTGGCTATTGTTTACGGGTTGCACGGGACTGGCTGCGGCGCCTGCTGCCTTCTTGTCTCGTTTTAAGGTTTTCACATTAAAAACCAGCAAAACTTGTCAGCTATCACTCAGACCGGGCTTGATCTGTTCATTATGCGCACCCCTCTGAATTTTCACGGGCTTGGGACCGTCCTCGGCTTCATTAGTGCCCCGCATTGCTGCGGGTGT ATGGGTTCAAGTCCCATTGCCGGCACTCAATGGCGCGAAGCCGAACCCGGTGTACTTTTTCAAGAAAGTGTTCGCCGTGGTGGTAAACTTCACGCGGAAATAGCGAAAAATAAAAGCGTCAGGGCTTAGGCTCTGGCGCTTTTGTTATGCCCGGTCGTCTCTCGATAGGGCTCGAGAAATAGAGCCTGCTCAGCTCGGCAGCTATCACCGTTCCTCTCTGGCCTCCTCGGCCGCGTGGCTATTGTTTACGGGTTGCACGGGACTGGCTGCGGCGCCTGCTGCCTTCTTGTCTCGTTTTAAGGTTTTCACATTAAAAACCAGCAAAACTTGTCAGCTATCACTCAGACCGGGCTTGATCTGTTCATTATGCGCACCCCTCTGAATTTTCACGGGCTTGGGACCGTCCTCGGCTTCATTAGTGCCCCGCATTGCTGCGGGTGTTATCTTTCCCCCATGTCTTTGTATA ACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTAT 332 TTerm_0767 NZ_LR027880.1 1054161 1054177 17 1054182 1054198 17 4 82 0 19 50 50 50 50 0 1054179 AATAAAAGCGTCAGGGC GCTCTGGCGCTTTTGTT True TAGCGAAAA ATGCCCGGT True True - AACAAAAGCGCCAGAGC CTAA GCCCTGACGCTTTTATT TTTTCGCTA 70 RIL182_RS04930 intergenic 1054077 1054493 - down ACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTATTTTTCGCTATTTCCGCGTGAAGTTTACCACCACGGCGAACACTTTCTTGAAAAAGTACACCGGGTTCGGCTTCGCGCCATTGAG TATACAAAGACATGGGGGAAAGATAACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTATTTTTCGCTATTTCCGCGTGAAGTTTACCACCACGGCGAACACTTTCTTGAAAAAGTACACCGGGTTCGGCTTCGCGCCATTGAGTGCCGGCAATGGGACTTGAACCCAT ACACCCGCAGCAATGCGGGGCACTAATGAAGCCGAGGACGGTCCCAAGCCCGTGAAAATTCAGAGGGGTGCGCATAATGAACAGATCAAGCCCGGTCTGAGTGATAGCTGACAAGTTTTGCTGGTTTTTAATGTGAAAACCTTAAAACGAGACAAGAAGGCAGCAGGCGCCGCAGCCAGTCCCGTGCAACCCGTAAACAATAGCCACGCGGCCGAGGAGGCCAGAGAGGAACGGTGATAGCTGCCGAGCTGAGCAGGCTCTATTTCTCGAGCCCTATCGAGAGACGACCGGGCATAACAAAAGCGCCAGAGCCTAAGCCCTGACGCTTTTAT 332 TTerm_0768 NZ_LR027880.1 1068064 1068072 9 1068078 1068086 9 5 88 0 13 5 94 0 100 0 1068074 GCCGCCGGC GCCAGCGGC True TAGAAAAAG CATGTTTTA True True - GCCGCTGGC AGAAC GCCGGCGGC CTTTTTCTA 66 RIL182_RS05025 intergenic 1068035 1068093 - down AAACATGGCCGCTGGCAGAACGCCGGCGGCTTTTTCTATAAAAGGAGGAACCAAAACC TGAGCGACATTAACAAACTACTGTAAAACATGGCCGCTGGCAGAACGCCGGCGGCTTTTTCTATAAAAGGAGGAACCAAAACCATGAGAACCCAGACAGAAGAAAGAG AAACATGGCCGCTGGCAGAACGCCGGCGG 29 TTerm_0769 NZ_LR027880.1 1079770 1079783 14 1079789 1079802 14 5 85 0 18 46 53 50 50 0 1079785 AAAAAACCGCCCGA TCGCGCGGTTTCTT True ACGGCAGCA TACCCATTT True False - AAGAAACCGCGCGA GAAAA TCGGGCGGTTTTTT TGCTGCCGT 76 RIL182_RS05090 intergenic 1079734 1079908 - down GCCGCCGCCGGCAGCAGGCTGAGCGTGCAATTTACCGGTGCAAAAAAGATGCAATTTACTTTGAAATTGAGCCGTGTTATAATTTTTACAATGCAATAAATGGGTAAAGAAACCGCGCGAGAAAATCGGGCGGTTTTTTGCTGCCGTTTTCAGGCTGAGAGGAGGCGATCACAC TATATGGCACGGCCGCCATTGATTAGCCGCCGCCGGCAGCAGGCTGAGCGTGCAATTTACCGGTGCAAAAAAGATGCAATTTACTTTGAAATTGAGCCGTGTTATAATTTTTACAATGCAATAAATGGGTAAAGAAACCGCGCGAGAAAATCGGGCGGTTTTTTGCTGCCGTTTTCAGGCTGAGAGGAGGCGATCACACATGGCAGCCACCAGAGGAACAACCA GCCGCCGCCGGCAGCAGGCTGAGCGTGCAATTTACCGGTGCAAAAAAGATGCAATTTACTTTGAAATTGAGCCGTGTTATAATTTTTACAATGCAATAAATGGGTAAAGAAACCGCGCGAGAAAATCGGGCGGTTTTT 138 TTerm_0770 NZ_LR027880.1 1086961 1086966 6 1086971 1086976 6 4 100 0 12 50 50 50 50 0 1086968 TCGAGA TCTCGA True GGAAAACGT TCGTCGAGA True False - TCGAGA CATT TCTCGA ACGTTTTCC 48 RIL182_RS05155 intergenic 1086933 1087055 - down AGGAGGTAGATAATGAGTGCAACAAACCGAGGAAGCACCAGAAAGCCGCACGACTTCTACCCGACACCAATCTCGACGATCGAGACATTTCTCGACGTTTTCCCTCTGAGGGGGGGATCGAG AGGGCCAGAGCTGGCGCAGCAGATAAGGAGGTAGATAATGAGTGCAACAAACCGAGGAAGCACCAGAAAGCCGCACGACTTCTACCCGACACCAATCTCGACGATCGAGACATTTCTCGACGTTTTCCCTCTGAGGGGGGGATCGAGGTGCTGGAACCGGGAGCAGGTAGCG AGGAGGTAGATAATGAGTGCAACAAACCGAGGAAGCACCAGAAAGCCGCACGACTTCTACCCGACACCAATCTCGACGATCGAGACATTTCTCG 94 TTerm_0771 NZ_LR027880.1 1099552 1099564 13 1099570 1099582 13 5 84 0 16 61 38 63 36 0 1099566 ATGGAAAACCTTG CAAAGTTTCCCAT True ATAAAAAAA CATTAAGAG True False - ATGGGAAACTTTG GTTTA CAAGGTTTTCCAT TTTTTTTAT 48 RIL182_RS05240 intergenic 1099156 1099595 + down AAATTAAATATGGGCGAAATATATAGAAGATAGAGGTGATTTCATCCATTTTATAATAGAAATTCATTTAACATACAAGAAAATGGGTGAAAAAGGATGAGATTTCATTATAATAGCCCACGAAAATCAAAAAGTCAGGGTGAAAACAGCAGAAATGAAGGAGTTTCGCCCAAAATGATAGAGGAAGAAGTTGAAAATAGAAAATAATGGGTGAAAGTGGTTTGAAAGATGGAAATTTAGCCCGTTCATCTGGTGGATGTCTGTTATGTGTGGATCAGAGTGAAAGCAGAGTAAATTTAAACGGAAACCCCATTCACAAATTCGCAGGAAAGCTTTGAAAAAGCACTGTGTGATCAGTAAAAAAGTGTAATTAATTTTTACATTGCAATAAAAAAATGGAAAACCTTGTAAACCAAAGTTTCCCATCATTAAGAGAAGA TATTATTTGCTCTTGGATGAGATAAAAATTAAATATGGGCGAAATATATAGAAGATAGAGGTGATTTCATCCATTTTATAATAGAAATTCATTTAACATACAAGAAAATGGGTGAAAAAGGATGAGATTTCATTATAATAGCCCACGAAAATCAAAAAGTCAGGGTGAAAACAGCAGAAATGAAGGAGTTTCGCCCAAAATGATAGAGGAAGAAGTTGAAAATAGAAAATAATGGGTGAAAGTGGTTTGAAAGATGGAAATTTAGCCCGTTCATCTGGTGGATGTCTGTTATGTGTGGATCAGAGTGAAAGCAGAGTAAATTTAAACGGAAACCCCATTCACAAATTCGCAGGAAAGCTTTGAAAAAGCACTGTGTGATCAGTAAAAAAGTGTAATTAATTTTTACATTGCAATAAAAAAATGGAAAACCTTGTAAACCAAAGTTTCCCATCATTAAGAGAAGAGCGCGAGACGGGACTCGAACCCGCG TCTTCTCTTAATGATGGGAAACTTTGGTTTACAAGGTTTTCCA 43 TTerm_0772 NZ_LR027880.1 1099552 1099564 13 1099570 1099582 13 5 84 0 16 61 38 63 36 0 1099566 ATGGAAAACCTTG CAAAGTTTCCCAT True ATAAAAAAA CATTAAGAG True False - ATGGGAAACTTTG GTTTA CAAGGTTTTCCAT TTTTTTTAT 48 RIL182_RS05245 intergenic 1099156 1099595 - down TCTTCTCTTAATGATGGGAAACTTTGGTTTACAAGGTTTTCCATTTTTTTATTGCAATGTAAAAATTAATTACACTTTTTTACTGATCACACAGTGCTTTTTCAAAGCTTTCCTGCGAATTTGTGAATGGGGTTTCCGTTTAAATTTACTCTGCTTTCACTCTGATCCACACATAACAGACATCCACCAGATGAACGGGCTAAATTTCCATCTTTCAAACCACTTTCACCCATTATTTTCTATTTTCAACTTCTTCCTCTATCATTTTGGGCGAAACTCCTTCATTTCTGCTGTTTTCACCCTGACTTTTTGATTTTCGTGGGCTATTATAATGAAATCTCATCCTTTTTCACCCATTTTCTTGTATGTTAAATGAATTTCTATTATAAAATGGATGAAATCACCTCTATCTTCTATATATTTCGCCCATATTTAATTT CGCGGGTTCGAGTCCCGTCTCGCGCTCTTCTCTTAATGATGGGAAACTTTGGTTTACAAGGTTTTCCATTTTTTTATTGCAATGTAAAAATTAATTACACTTTTTTACTGATCACACAGTGCTTTTTCAAAGCTTTCCTGCGAATTTGTGAATGGGGTTTCCGTTTAAATTTACTCTGCTTTCACTCTGATCCACACATAACAGACATCCACCAGATGAACGGGCTAAATTTCCATCTTTCAAACCACTTTCACCCATTATTTTCTATTTTCAACTTCTTCCTCTATCATTTTGGGCGAAACTCCTTCATTTCTGCTGTTTTCACCCTGACTTTTTGATTTTCGTGGGCTATTATAATGAAATCTCATCCTTTTTCACCCATTTTCTTGTATGTTAAATGAATTTCTATTATAAAATGGATGAAATCACCTCTATCTTCTATATATTTCGCCCATATTTAATTTTTATCTCATCCAAGAGCAAATAATA TCTTCTCTTAATGATGGGAAACTTTGGTTTACAAGGTTTTCCA 43 TTerm_0773 NZ_LR027880.1 1117420 1117427 8 1117437 1117444 8 9 87 0 11 62 37 57 42 0 1117431 TTATGTGC GCACAAAA True TAAAACTGT ACAGAGAGC True False - TTTTGTGC TGTCTCCCG GCACATAA ACAGTTTTA 46 RIL182_RS05330 intergenic 1117409 1117472 + down TGTAAAACTGTTATGTGCCGGGAGACAGCACAAAAACAGAGAGCAGTTTGAGAGGATCAGATA TGCGGGAGAGATATGCTGGATATGATGTAAAACTGTTATGTGCCGGGAGACAGCACAAAAACAGAGAGCAGTTTGAGAGGATCAGATATGGGTATAACAGGAAAGATATACGG TATCTGATCCTCTCAAACTGCTCTCTGTTTTTGTGCTGTCTCCCGGCACATA 52 TTerm_0774 NZ_LR027880.1 1134339 1134347 9 1134353 1134361 9 5 88 0 13 83 16 87 12 0 1134349 TGAAATAAT ATTATGTCA True AAAAAACAT AAATACACA True False - TGACATAAT AGTAA ATTATTTCA ATGTTTTTT 34 RIL182_RS05405 intergenic 1134312 1134541 + down AGCAACAGAATGACGTTAAAAAAACATGAAATAATTTACTATTATGTCAAAATACACAACGAAATAAAACGAAAATCAAAGAAAAGTGATGAAATGCACAAATAAAAAGAAGAATTTTTAAGAAAGACAGAAGAATATTGTATGTTTATCCAATCCTCCTGTTGGTATAATGCACTTGTAACAAACAAAGAGTTACAAATACATTAAATCAAATGGGAGGATTTTTCTA AGCAGAGAGTATTTTAGAACTTTAAAGCAACAGAATGACGTTAAAAAAACATGAAATAATTTACTATTATGTCAAAATACACAACGAAATAAAACGAAAATCAAAGAAAAGTGATGAAATGCACAAATAAAAAGAAGAATTTTTAAGAAAGACAGAAGAATATTGTATGTTTATCCAATCCTCCTGTTGGTATAATGCACTTGTAACAAACAAAGAGTTACAAATACATTAAATCAAATGGGAGGATTTTTCTATGAAAAGAAAGGTAGTTAGTGTAAT TAGAAAAATCCTCCCATTTGATTTAATGTATTTGTAACTCTTTGTTTGTTACAAGTGCATTATACCAACAGGAGGATTGGATAAACATACAATATTCTTCTGTCTTTCTTAAAAATTCTTCTTTTTATTTGTGCATTTCATCACTTTTCTTTGATTTTCGTTTTATTTCGTTGTGTATTTTGACATAATAGTAAATTATTTC 202 TTerm_0775 NZ_LR027880.1 1138869 1138875 7 1138881 1138887 7 5 100 0 14 85 14 85 14 0 1138877 AATATGA TCATATT True AATGTGAAA GGAATGGAG True False - AATATGA AAAAA TCATATT TTTCACATT 36 RIL182_RS05425 intergenic 1138852 1138908 + down CGGAAGAAAATGTGAAAATATGATTTTTTCATATTGGAATGGAGAATAGAACACGA TATGAATGCAAAATATGGAGACTAGCGGAAGAAAATGTGAAAATATGATTTTTTCATATTGGAATGGAGAATAGAACACGATGAATTTATATTCGGTATTATTGGT TCGTGTTCTATTCTCCATTCCAATATGAAAAAATCATAT 39 TTerm_0776 NZ_LR027880.1 1145185 1145191 7 1145200 1145206 7 8 100 0 14 100 0 100 0 0 1145195 ATAAAAA TTTTTAT True AAAATTGAA GTTCAGATA True False - ATAAAAA TAATATAC TTTTTAT TTCAATTTT 28 RIL182_RS05450 intergenic 1145094 1145628 + down AAAATGTCTGAACGGCCATCTTTGATGGGAAACACTGGACTTTTTTTTCATATCATAGTATAGTAAAGCATGTTGAACCTTGAAAATTGAATAAAAAGTATATTATTTTTATGTTCAGATACGCGGTCTTTGCGCCCGTATACCGGATACATAAATGTGACAGCAGATCTGCCGGAAGGATATGCAGTCTGTTGTCTCCTTATTAGCGCCATGCACCTGTGGAAAATGCATAGGAAGGTTCTGTGAACAGACATTGTGATATGTTCAGGAATTACCTGTGTTTCAATCAGCAGGTTAACGAGGAGGAGAGTGATCGAAGATTCGGCGGATGCTCTCCCGTACACTCCCGGTGCGAGATATACCGGCAAATATGCAGGTGACTGCAAAACAAATACGGTATAAGGGAGAAGATAACCTGAAAAATATTTTTGCTGTCAGAAGAGGATCTTCTGACAGTGGAACTGGTCAGGAAAAATGAGTGTACCGGCGGGATTGTGCCGGAAACAGTTGATAGATAGAAAAGAGGAAAATTTA AGTCTGGAAATCGATGCATGAATAAAAAATGTCTGAACGGCCATCTTTGATGGGAAACACTGGACTTTTTTTTCATATCATAGTATAGTAAAGCATGTTGAACCTTGAAAATTGAATAAAAAGTATATTATTTTTATGTTCAGATACGCGGTCTTTGCGCCCGTATACCGGATACATAAATGTGACAGCAGATCTGCCGGAAGGATATGCAGTCTGTTGTCTCCTTATTAGCGCCATGCACCTGTGGAAAATGCATAGGAAGGTTCTGTGAACAGACATTGTGATATGTTCAGGAATTACCTGTGTTTCAATCAGCAGGTTAACGAGGAGGAGAGTGATCGAAGATTCGGCGGATGCTCTCCCGTACACTCCCGGTGCGAGATATACCGGCAAATATGCAGGTGACTGCAAAACAAATACGGTATAAGGGAGAAGATAACCTGAAAAATATTTTTGCTGTCAGAAGAGGATCTTCTGACAGTGGAACTGGTCAGGAAAAATGAGTGTACCGGCGGGATTGTGCCGGAAACAGTTGATAGATAGAAAAGAGGAAAATTTATGTGTGGAATTATTGGTTATACAGG TAAATTTTCCTCTTTTCTATCTATCAACTGTTTCCGGCACAATCCCGCCGGTACACTCATTTTTCCTGACCAGTTCCACTGTCAGAAGATCCTCTTCTGACAGCAAAAATATTTTTCAGGTTATCTTCTCCCTTATACCGTATTTGTTTTGCAGTCACCTGCATATTTGCCGGTATATCTCGCACCGGGAGTGTACGGGAGAGCATCCGCCGAATCTTCGATCACTCTCCTCCTCGTTAACCTGCTGATTGAAACACAGGTAATTCCTGAACATATCACAATGTCTGTTCACAGAACCTTCCTATGCATTTTCCACAGGTGCATGGCGCTAATAAGGAGACAACAGACTGCATATCCTTCCGGCAGATCTGCTGTCACATTTATGTATCCGGTATACGGGCGCAAAGACCGCGTATCTGAACATAAAAATAATATACTTTTTA 443 TTerm_0777 NZ_LR027880.1 1147527 1147544 18 1147549 1147566 18 4 77 0 16 38 61 35 64 0 1147546 TGGGGGAAGCCGCACAAA TTGGTGTGACTGCCCCCA True AAAAAGATT TTTGCATTT True False - TGGGGGCAGTCACACCAA ATAC TTTGTGCGGCTTCCCCCA AATCTTTTT 56 RIL182_RS05460 intergenic 1147448 1147574 + down GAGAAGCAAAATAAAAAGATATGTGGAAAAGTGTCCGGAAAGGGGAAAAAGACCGCGTATCTGAGCATAAAAAAAGATTGGGGGAAGCCGCACAAAGTATTTGGTGTGACTGCCCCCATTTGCATT GGCGAAAGTAGTGACGGTGGAATAAGAGAAGCAAAATAAAAAGATATGTGGAAAAGTGTCCGGAAAGGGGAAAAAGACCGCGTATCTGAGCATAAAAAAAGATTGGGGGAAGCCGCACAAAGTATTTGGTGTGACTGCCCCCATTTGCATTTAGACCAGTTCCGCGATGCGCGACA AATGCAAATGGGGGCAGTCACACCAAATACTTTGTGCGGCTTCCCCC 47 TTerm_0778 NZ_LR027880.1 1147527 1147544 18 1147549 1147566 18 4 77 0 16 38 61 35 64 0 1147546 TGGGGGAAGCCGCACAAA TTGGTGTGACTGCCCCCA True AAAAAGATT TTTGCATTT True False - TGGGGGCAGTCACACCAA ATAC TTTGTGCGGCTTCCCCCA AATCTTTTT 56 RIL182_RS05465 intergenic 1147448 1147574 - down AATGCAAATGGGGGCAGTCACACCAAATACTTTGTGCGGCTTCCCCCAATCTTTTTTTATGCTCAGATACGCGGTCTTTTTCCCCTTTCCGGACACTTTTCCACATATCTTTTTATTTTGCTTCTC TGTCGCGCATCGCGGAACTGGTCTAAATGCAAATGGGGGCAGTCACACCAAATACTTTGTGCGGCTTCCCCCAATCTTTTTTTATGCTCAGATACGCGGTCTTTTTCCCCTTTCCGGACACTTTTCCACATATCTTTTTATTTTGCTTCTCTTATTCCACCGTCACTACTTTCGCC AATGCAAATGGGGGCAGTCACACCAAATACTTTGTGCGGCTTCCCCC 47 TTerm_0779 NZ_LR027880.1 1154757 1154767 11 1154772 1154782 11 4 81 0 12 86 13 88 11 0 1154769 TTTTCATAATA TATAACGAAAA True AAAAGTTAT GAGGAAGCG True False - TTTTCGTTATA TATT TATTATGAAAA ATAACTTTT 32 RIL182_RS05490 intergenic 1154765 1154793 + down TAAATATATAACGAAAAGAGGAAGCGTA TTTCTTTAAAAAGTTATTTTCATAATAAATATATAACGAAAAGAGGAAGCGTATGTTAGAGAGAAAAAGAAAGTTAGA TACGCTTCCTCTTTTCGTTATATATTTATTATGAAA 36 TTerm_0780 NZ_LR027880.1 1156536 1156556 21 1156565 1156585 21 8 71 0 12 52 47 53 46 0 1156560 TACCGACCCCAAAAGTTTAGA TCTAACGATTGGAGGCCGGTA True GAAAAGTGT TTTTTATTG True True - TACCGGCCTCCAATCGTTAGA TTTTTAGG TCTAAACTTTTGGGGTCGGTA ACACTTTTC 40 RIL182_RS05495 intergenic 1156481 1156769 + down TAAGGCAGTTATAATTTTTTGTATATGAAAAAAGAGATATGATATCGAAAAGTGTACCGACCCCAAAAGTTTAGACCTAAAAATCTAACGATTGGAGGCCGGTATTTTTATTGCTTTATTTGTTTCATATAAATTCAATGAAATCTCAATATCTTGTAATCTTTAGAATTCCTTAATAATATTTTCCATAAAATAAATGTTGACAAATTATATTATACGAAATATAGTATTAATAAGAAAATAATATTAAAACAGATAGAATATTATAAAGAAAAGGAGATGAGCGTA CGTGTATCTGTTTGGTGCGAAATAGTAAGGCAGTTATAATTTTTTGTATATGAAAAAAGAGATATGATATCGAAAAGTGTACCGACCCCAAAAGTTTAGACCTAAAAATCTAACGATTGGAGGCCGGTATTTTTATTGCTTTATTTGTTTCATATAAATTCAATGAAATCTCAATATCTTGTAATCTTTAGAATTCCTTAATAATATTTTCCATAAAATAAATGTTGACAAATTATATTATACGAAATATAGTATTAATAAGAAAATAATATTAAAACAGATAGAATATTATAAAGAAAAGGAGATGAGCGTATGGTATTTAATACAGGAGCCGCTCT TACGCTCATCTCCTTTTCTTTATAATATTCTATCTGTTTTAATATTATTTTCTTATTAATACTATATTTCGTATAATATAATTTGTCAACATTTATTTTATGGAAAATATTATTAAGGAATTCTAAAGATTACAAGATATTGAGATTTCATTGAATTTATATGAAACAAATAAAGCAATAAAAATACCGGCCTCCAATCGTTAGATTTTTAGGTCTAAACTTTTGGGGTCGGT 233 TTerm_0781 NZ_LR027880.1 1171319 1171326 8 1171334 1171341 8 7 87 0 11 56 43 57 42 0 1171329 AAAGGGAA TTCCCCTT True GTTCCACAA CCCGGATAA True False - AAGGGGAA CCTCCCC TTCCCTTT TTGTGGAAC 54 RIL182_RS05550 intergenic 1171306 1171357 + down TATAGTTCCACAAAAGGGAAGGGGAGGTTCCCCTTCCCGGATAAAAGACAA AAACGGAATTGAAGTAACTGAGTAATATAGTTCCACAAAAGGGAAGGGGAGGTTCCCCTTCCCGGATAAAAGACAATGGATGGAGGAATTGTGGATATGGA TTGTCTTTTATCCGGGAAGGGGAACCTCCCCTTCCCTT 38 TTerm_0782 NZ_LR027880.1 1176847 1176853 7 1176861 1176867 7 7 100 0 14 71 28 71 28 0 1176856 TGCTATT AATAGCA True AAAATTGCT TAAAATTAA True False - TGCTATT AAGGATG AATAGCA AGCAATTTT 44 RIL182_RS05575 intergenic 1176840 1177042 + down AATTGCTGCTATTCATCCTTAATAGCATAAAATTAATTCATAACACAGGCTGCCAGATGCAATGAAAATTGCGGCAGCCTTGTTGCGTAATTCATGAAACGTGTGATGGAGTGTCCGCAGAACGTGCATTTTATCATAATGGAATGTCCGCGGAGCGGGCAGTCTGCTTACATATTTAATTTTTGGAGGGAAACTCAGAACA AGATACCGAGATCGGAAGACGCTAAAATTGCTGCTATTCATCCTTAATAGCATAAAATTAATTCATAACACAGGCTGCCAGATGCAATGAAAATTGCGGCAGCCTTGTTGCGTAATTCATGAAACGTGTGATGGAGTGTCCGCAGAACGTGCATTTTATCATAATGGAATGTCCGCGGAGCGGGCAGTCTGCTTACATATTTAATTTTTGGAGGGAAACTCAGAACATGATAATTAAACCAGATAATGAAAT TGTTCTGAGTTTCCCTCCAAAAATTAAATATGTAAGCAGACTGCCCGCTCCGCGGACATTCCATTATGATAAAATGCACGTTCTGCGGACACTCCATCACACGTTTCATGAATTACGCAACAAGGCTGCCGCAATTTTCATTGCATCTGGCAGCCTGTGTTATGAATTAATTTTATGCTATTAAGGATGAATAGC 195 TTerm_0783 NZ_LR027880.1 1190077 1190083 7 1190088 1190094 7 4 100 0 14 57 42 57 42 0 1190085 ATGATGG CCATCAT True GAAAACTCA TTGATATAG True False - ATGATGG CGGA CCATCAT TGAGTTTTC 52 RIL182_RS05615 intergenic 1189911 1190148 + down GGGATTGTGAGGGAAAAAGTCCTGCGGATGCAGAGCATATCGTATTCGCAGGACAGTTTATATTTTTTTTATAAAATAATTAGCACTCACCTCTTGACAGTGCTAACAAACGGGTGTATAACACAAATTGTAAACGGAAAAAGATATAAATAAGAGGGAAAACTCATGATGGTCCGCCATCATTTGATATAGATGTCCAGTTTGGACCACAATTGAATAAGAGGGAGGAAGAATATA AGATGTGATCCGGATAGAAGAATAGGGGATTGTGAGGGAAAAAGTCCTGCGGATGCAGAGCATATCGTATTCGCAGGACAGTTTATATTTTTTTTATAAAATAATTAGCACTCACCTCTTGACAGTGCTAACAAACGGGTGTATAACACAAATTGTAAACGGAAAAAGATATAAATAAGAGGGAAAACTCATGATGGTCCGCCATCATTTGATATAGATGTCCAGTTTGGACCACAATTGAATAAGAGGGAGGAAGAATATATGAACATTCAGAAATTTACACAGAA TATATTCTTCCTCCCTCTTATTCAATTGTGGTCCAAACTGGACATCTATATCAAATGATGGCGGACCATCA 71 TTerm_0784 NZ_LR027880.1 1192802 1192818 17 1192826 1192842 17 7 88 0 24 64 35 66 33 0 1192821 AAAGAAGGACTTTATCC GGATAGAGTCCTTTTTT True AAATAGAAA CAATAGTTG True True - AAAAAAGGACTCTATCC GTTTTGG GGATAAAGTCCTTCTTT TTTCTATTT 72 RIL182_RS05620 intergenic 1192730 1192902 + down CAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTTCAATAGTTGTATTTTGAAGATGAAGGAACATGATGAGGAAGAAATCTGAAAAAATTCGTT CCATCTGACTGCGCGCGTAAAGTGACAGATTGTGGATGGTAGCGAGAGAATCAGACAATGTGCCTGAAGAGATAATTGTATAGATACAAAATAGAAAAAGAAGGACTTTATCCCCAAAACGGATAGAGTCCTTTTTTCAATAGTTGTATTTTGAAGATGAAGGAACATGATGAGGAAGAAATCTGAAAAAATTCGTTTATTTGCTGTGTACTTTGCGCAGCA AACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTT 100 TTerm_0785 NZ_LR027880.1 1192802 1192818 17 1192826 1192842 17 7 88 0 24 64 35 66 33 0 1192821 AAAGAAGGACTTTATCC GGATAGAGTCCTTTTTT True AAATAGAAA CAATAGTTG True True - AAAAAAGGACTCTATCC GTTTTGG GGATAAAGTCCTTCTTT TTTCTATTT 72 RIL182_RS05625 intergenic 1192730 1192902 - down AACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTTTTTCTATTTTGTATCTATACAATTATCTCTTCAGGCACATTGTCTGATTCTCTCGCTACCATCCACAATCTG TGCTGCGCAAAGTACACAGCAAATAAACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTTTTTCTATTTTGTATCTATACAATTATCTCTTCAGGCACATTGTCTGATTCTCTCGCTACCATCCACAATCTGTCACTTTACGCGCGCAGTCAGATGG AACGAATTTTTTCAGATTTCTTCCTCATCATGTTCCTTCATCTTCAAAATACAACTATTGAAAAAAGGACTCTATCCGTTTTGGGGATAAAGTCCTTCTT 100 TTerm_0786 NZ_LR027880.1 1197346 1197371 26 1197378 1197403 26 6 84 0 32 71 28 72 27 0 1197374 AAAACCAAAACGTTTTGGGATATGAT ATCAGTTACCAAAACGTTTTAGTTTT True AAGACTTGA TTACTTTAT True True - AAAACTAAAACGTTTTGGTAACTGAT AAACGA ATCATATCCCAAAACGTTTTGGTTTT TCAAGTCTT 80 RIL182_RS05640 intergenic 1197266 1197437 + down ACTTGTGAAAATTATATAAAAGTAAACAATAAAATTCGTGAAACATGATGAAAAAACAAAAAAATGTACAAAAGACTTGAAAACCAAAACGTTTTGGGATATGATTCGTTTATCAGTTACCAAAACGTTTTAGTTTTTTACTTTATACTAATGTTTCAGGAGGAATACATA GAAACGCGCATCAACAAAGAAATGAACTTGTGAAAATTATATAAAAGTAAACAATAAAATTCGTGAAACATGATGAAAAAACAAAAAAATGTACAAAAGACTTGAAAACCAAAACGTTTTGGGATATGATTCGTTTATCAGTTACCAAAACGTTTTAGTTTTTTACTTTATACTAATGTTTCAGGAGGAATACATATGAAGAAAAGATTTGTATCTATTTT TATGTATTCCTCCTGAAACATTAGTATAAAGTAAAAAACTAAAACGTTTTGGTAACTGATAAACGAATCATATCCCAAAACGTTTTGGTTT 91 TTerm_0787 NZ_LR027880.1 1216421 1216433 13 1216438 1216450 13 4 92 0 21 57 42 58 41 0 1216435 AAAAGGCAAGGGA TCTCTTGCCTTTT True GGCTTATGA GGTTATTTA True True - AAAAGGCAAGAGA TCTC TCCCTTGCCTTTT TCATAAGCC 58 RIL182_RS05705 intergenic 1216405 1216581 + down GGTGGCTGGCTTATGAAAAGGCAAGGGAGAGATCTCTTGCCTTTTGGTTATTTATGTCAGATTATGAAATAGAAAAATAAATATTTTACGTTAATATATGAAAATTTGGAAGATGCATGTTACAATAGTAAGTAAATAAAATATAAAGGCATAAAATAACAGATGGAGAAGGGGAA CACGTATAAGACGGAAGAGTTGTAGGGTGGCTGGCTTATGAAAAGGCAAGGGAGAGATCTCTTGCCTTTTGGTTATTTATGTCAGATTATGAAATAGAAAAATAAATATTTTACGTTAATATATGAAAATTTGGAAGATGCATGTTACAATAGTAAGTAAATAAAATATAAAGGCATAAAATAACAGATGGAGAAGGGGAATGTTAGCAAAATTAGAATTAAAGTT TTCCCCTTCTCCATCTGTTATTTTATGCCTTTATATTTTATTTACTTACTATTGTAACATGCATCTTCCAAATTTTCATATATTAACGTAAAATATTTATTTTTCTATTTCATAATCTGACATAAATAACCAAAAGGCAAGAGATCTCTCCCTTGCCTTT 160 TTerm_0788 NZ_LR027880.1 1220703 1220712 10 1220718 1220727 10 5 90 0 15 95 5 100 0 0 1220714 AAAATAAATT AATTGATTTT True AGTGGAATA TGACTACAG True True - AAAATCAATT CTGCA AATTTATTTT TATTCCACT 38 RIL182_RS05725 intergenic 1220704 1220760 + down AATAAATTTGCAGAATTGATTTTTGACTACAGAGAGAAAAGAAATGAGGCGGGACA GAAAATCATGAGTGCAGTGGAATAAAATAAATTTGCAGAATTGATTTTTGACTACAGAGAGAAAAGAAATGAGGCGGGACATGGAATATACGATCTATCAGTTAGA TGTCCCGCCTCATTTCTTTTCTCTCTGTAGTCAAAAATCAATTCTGCAAATTTATTT 57 TTerm_0789 NZ_LR027880.1 1229716 1229729 14 1229735 1229748 14 5 100 0 28 64 35 64 35 0 1229731 AAAAAAGCAAGGGA TCCCTTGCTTTTTT True CATGACATA CTCCCCTCT True True - AAAAAAGCAAGGGA TGTTG TCCCTTGCTTTTTT TATGTCATG 80 RIL182_RS05760 intergenic 1229699 1229846 + down GAGTACTGCATGACATAAAAAAGCAAGGGACAACATCCCTTGCTTTTTTCTCCCCTCTGTGCTACACTGTCACAAGCTGACAAGACACATGTTAACCACATGAAAACACAGCAAAGAGGAGTAAGAAACTCCGGATTGGAGAAATTA TGTTCATAAGTTATTAACGGAATAAGAGTACTGCATGACATAAAAAAGCAAGGGACAACATCCCTTGCTTTTTTCTCCCCTCTGTGCTACACTGTCACAAGCTGACAAGACACATGTTAACCACATGAAAACACAGCAAAGAGGAGTAAGAAACTCCGGATTGGAGAAATTATGGAAAAAGTAAAGGCATTTTGTAA TAATTTCTCCAATCCGGAGTTTCTTACTCCTCTTTGCTGTGTTTTCATGTGGTTAACATGTGTCTTGTCAGCTTGTGACAGTGTAGCACAGAGGGGAGAAAAAAGCAAGGGATGTTGTCCCTTGCTTTTT 130 TTerm_0790 NZ_LR027880.1 1238442 1238458 17 1238466 1238483 18 7 94 5 24 65 34 64 35 0 1238461 AAAAGCTGCCAATGATA TATCATTAGGCAGCTTTT True TGTAGGAGA TATAATGAA True True - AAAAGCTGCCTAATGATA TTATCAC TATCATTGGCAGCTTTT TCTCCTACA 56 RIL182_RS05800 intergenic 1238404 1238627 + down GAGAGACAGGTATAAAGTGAAAATGAATGTGTAGGAGAAAAGCTGCCAATGATAGTGATAATATCATTAGGCAGCTTTTTATAATGAACAAAGGAAAAAGAAAACGTGTATTTTGACTGGATTATATAGTATAATATATTCCGTGTCTGAGAGAGAAATAAAACATAAGAGGATAGTGCGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGGGATTAAGA AAAAATAAAAGTTGTGGTCAAATAAGAGAGACAGGTATAAAGTGAAAATGAATGTGTAGGAGAAAAGCTGCCAATGATAGTGATAATATCATTAGGCAGCTTTTTATAATGAACAAAGGAAAAAGAAAACGTGTATTTTGACTGGATTATATAGTATAATATATTCCGTGTCTGAGAGAGAAATAAAACATAAGAGGATAGTGCGTGTGAAAAATAAGATTTTTCACACGCAAGAATGGGGATTAAGATGAGAATAGGATTTGATAATGACAA TCTTAATCCCCATTCTTGCGTGTGAAAAATCTTATTTTTCACACGCACTATCCTCTTATGTTTTATTTCTCTCTCAGACACGGAATATATTATACTATATAATCCAGTCAAAATACACGTTTTCTTTTTCCTTTGTTCATTATAAAAAGCTGCCTAATGATATTATCACTATCATTGGCAGCTTT 185 TTerm_0791 NZ_LR027880.1 1261607 1261616 10 1261625 1261634 10 8 100 0 20 70 30 70 30 0 1261620 ATTGTGAAAC GTTTCACAAT True TGAAAATAA ATCACAAAA True False - ATTGTGAAAC TGGCACTG GTTTCACAAT TTATTTTCA 56 RIL182_RS05930 intergenic 1261558 1261700 + down CATAACGGCAGCATGGCTGATTGTAAAACTCATCAAAAACTGAAAATAATTGTGAAACCAGTGCCAGTTTCACAATATCACAAAAGTAAAGCTGAGTTTTACAATCAGTCACGCGAGCCATACACACAGAAAGGAGCACACA CGAAGAAATCTGGATGTTACAGTAACATAACGGCAGCATGGCTGATTGTAAAACTCATCAAAAACTGAAAATAATTGTGAAACCAGTGCCAGTTTCACAATATCACAAAAGTAAAGCTGAGTTTTACAATCAGTCACGCGAGCCATACACACAGAAAGGAGCACACATGGACGCAGCACAAATCCTAAAACT TGTGTGCTCCTTTCTGTGTGTATGGCTCGCGTGACTGATTGTAAAACTCAGCTTTACTTTTGTGATATTGTGAAACTGGCACTGGTTTCACAA 93 TTerm_0792 NZ_LR027880.1 1264054 1264066 13 1264074 1264086 13 7 84 0 16 61 38 63 36 0 1264069 AAAAAGGGAGTCA TGACTCCTCTTTT True TATTTGTAA AGGGTATCT True True - AAAAGAGGAGTCA GTCATGT TGACTCCCTTTTT TTACAAATA 56 RIL182_RS05945 intergenic 1264054 1264328 + down AAAAGGGAGTCAACATGACTGACTCCTCTTTTAGGGTATCTTCTGTAAATATATGAGTTTCATATCCTCTCGATTTTTAAAATTTTTGTTCTTTCGCCGGATATTATATTTCCGGTGTTTCTACCATAGTTTTTCTCGACATCATCCTCTTTTCGTTACTTGTTTTCTTAGTTTTTATATTTTCTGCTTAACAAGCATAATTATAAGGCGCGTTTTATATATAAATAATATAAATTCTTCTTGACAAGCATATTTTATGGATGGAGAACATGCA GATCCTGGTAGAGAAATATTTGTAAAAAAGGGAGTCAACATGACTGACTCCTCTTTTAGGGTATCTTCTGTAAATATATGAGTTTCATATCCTCTCGATTTTTAAAATTTTTGTTCTTTCGCCGGATATTATATTTCCGGTGTTTCTACCATAGTTTTTCTCGACATCATCCTCTTTTCGTTACTTGTTTTCTTAGTTTTTATATTTTCTGCTTAACAAGCATAATTATAAGGCGCGTTTTATATATAAATAATATAAATTCTTCTTGACAAGCATATTTTATGGATGGAGAACATGCATGAAAGCATTTTGGTATAACGATGA TGCATGTTCTCCATCCATAAAATATGCTTGTCAAGAAGAATTTATATTATTTATATATAAAACGCGCCTTATAATTATGCTTGTTAAGCAGAAAATATAAAAACTAAGAAAACAAGTAACGAAAAGAGGATGATGTCGAGAAAAACTATGGTAGAAACACCGGAAATATAATATCCGGCGAAAGAACAAAAATTTTAAAAATCGAGAGGATATGAAACTCATATATTTACAGAAGATACCCTAAAAGAGGAGTCAGTCATGTTGACTCCCTTTT 274 TTerm_0793 NZ_LR027880.1 1265813 1265827 15 1265834 1265848 15 6 73 0 10 93 6 100 0 0 1265830 TTTAAAAACAATATA TATAATTCTTATAAA True ACATATTGT GCATGACAT True False - TTTATAAGAATTATA TTAATT TATATTGTTTTTAAA ACAATATGT 20 RIL182_RS05950 intergenic 1265817 1266008 + down AAACAATATAAATTAATATAATTCTTATAAAGCATGACATTCTGAATTATCTACACAGGCATATGCGCCATTCTATGAACAGATCGAAATCATAAGAATTTTCAATGCTTTTATTACTCACATATTTAAGCAGGGAGAATTCTTAGAAACCCAAAGATTTCTCCTAAACAACACAGAGGAGGAGAAACAAA GATGTATGGGAAACATATTGTTTAAAAACAATATAAATTAATATAATTCTTATAAAGCATGACATTCTGAATTATCTACACAGGCATATGCGCCATTCTATGAACAGATCGAAATCATAAGAATTTTCAATGCTTTTATTACTCACATATTTAAGCAGGGAGAATTCTTAGAAACCCAAAGATTTCTCCTAAACAACACAGAGGAGGAGAAACAAATGGGGACAGCGGACATGGTAACAAA TTTGTTTCTCCTCCTCTGTGTTGTTTAGGAGAAATCTTTGGGTTTCTAAGAATTCTCCCTGCTTAAATATGTGAGTAATAAAAGCATTGAAAATTCTTATGATTTCGATCTGTTCATAGAATGGCGCATATGCCTGTGTAGATAATTCAGAATGTCATGCTTTATAAGAATTATATTAATTTATATTGTTTTTAA 195 TTerm_0794 NZ_LR027880.1 1267144 1267159 16 1267169 1267184 16 9 87 0 22 62 37 57 42 0 1267163 AAAACGCTGAATCCAT ATGGAAACAGCGTTTT True GAAAATGAA GGCAAAATC True True - AAAACGCTGTTTCCAT TGATTTATC ATGGATTCAGCGTTTT TTCATTTTC 60 RIL182_RS05955 intergenic 1267126 1267208 + down TTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTTGGCAAAATCAATAAAACAAAGCGT GATGTATGGGAAAAGGACGGTGTAATTGTACATTGAAAATGAAAAACGCTGAATCCATGATAAATCAATGGAAACAGCGTTTTGGCAAAATCAATAAAACAAAGCGTTACATTTCAACCACAGCAACACCCC ACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTT 64 TTerm_0795 NZ_LR027880.1 1267144 1267159 16 1267169 1267184 16 9 87 0 22 62 37 57 42 0 1267163 AAAACGCTGAATCCAT ATGGAAACAGCGTTTT True GAAAATGAA GGCAAAATC True True - AAAACGCTGTTTCCAT TGATTTATC ATGGATTCAGCGTTTT TTCATTTTC 60 RIL182_RS05960 intergenic 1267126 1267208 - down ACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTTTTCATTTTCAATGTACAA GGGGTGTTGCTGTGGTTGAAATGTAACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTTTTCATTTTCAATGTACAATTACACCGTCCTTTTCCCATACATC ACGCTTTGTTTTATTGATTTTGCCAAAACGCTGTTTCCATTGATTTATCATGGATTCAGCGTTT 64 TTerm_0796 NZ_LR027880.1 1277066 1277075 10 1277085 1277094 10 9 100 0 20 40 60 40 60 0 1277079 ATGGGGACTG CAGTCCCCAT True AAAACGGGA TCTTAAAAA True False - ATGGGGACTG TCATTCGTC CAGTCCCCAT TCCCGTTTT 72 RIL182_RS05980 intergenic 1277047 1277118 + down AAATTGTGAGAAAACGGGATGGGGACTGGACGAATGACAGTCCCCATTCTTAAAAAAGAGGAGTGAAACTA TGAGGAAGCAAAAAAATATCAGTAAAAATTGTGAGAAAACGGGATGGGGACTGGACGAATGACAGTCCCCATTCTTAAAAAAGAGGAGTGAAACTATGGCTTCAATAACAGTAACGAAAAA TAGTTTCACTCCTCTTTTTTAAGAATGGGGACTGTCATTCGTCCAGTCCCCA 52 TTerm_0797 NZ_LR027880.1 1289593 1289598 6 1289608 1289613 6 9 100 0 12 83 16 83 16 0 1289602 TTTTTG CAAAAA True GAGAAAAGT TTCTCATTC True False - TTTTTG GCTAAGTCG CAAAAA ACTTTTCTC 32 RIL182_RS06020 intergenic 1289421 1289644 + down TCAAATATCTGTAAAACTCAGATTTCCACATGGCTTTGGAATAACTTTTATGAGGAGGGCATTATCTCCTGCCAGACAGGACATTGCTTTCCGGCAGAGGCGGATATTTTCCTGCTGGAAACCAATGCCTTCCTTGTGACAGGCTATGTGAAATTTTTAAAAAGAGAAAAGTTTTTGCGACTTAGCCAAAAATTCTCATTCACGCGCATAGGGAGTGAATCTA TATTACACAGCCGGTAGCTGAATAATCAAATATCTGTAAAACTCAGATTTCCACATGGCTTTGGAATAACTTTTATGAGGAGGGCATTATCTCCTGCCAGACAGGACATTGCTTTCCGGCAGAGGCGGATATTTTCCTGCTGGAAACCAATGCCTTCCTTGTGACAGGCTATGTGAAATTTTTAAAAAGAGAAAAGTTTTTGCGACTTAGCCAAAAATTCTCATTCACGCGCATAGGGAGTGAATCTATGAAAACATTTTTAAACGCAATCAA TAGATTCACTCCCTATGCGCGTGAATGAGAATTTTTGGCTAAGTCGCAAAA 51 TTerm_0798 NZ_LR027880.1 1294002 1294011 10 1294021 1294030 10 9 100 0 20 40 60 40 60 0 1294015 ACTGCCGTAC GTACGGCAGT True ACAAAATGA TTTAAAAAG True True - ACTGCCGTAC AATATTTCA GTACGGCAGT TCATTTTGT 72 RIL182_RS06040 intergenic 1293978 1294051 + down ATTCTGGTAACAGAAACAAAATGACTGCCGTACTGAAATATTGTACGGCAGTTTTAAAAAGAGGTAATAACCA AATTACAAAATTTGATTTTGACTAAATTCTGGTAACAGAAACAAAATGACTGCCGTACTGAAATATTGTACGGCAGTTTTAAAAAGAGGTAATAACCATGGGAAAAAAGAAAAAAGACACAAT TGGTTATTACCTCTTTTTAAAACTGCCGTACAATATTTCAGTACGGCAG 49 TTerm_0799 NZ_LR027880.1 1295041 1295046 6 1295053 1295058 6 6 100 0 12 83 16 83 16 0 1295049 CATTTT AAAATG True AAAATGCGC GAGATAAGA True False - CATTTT AACGGA AAAATG GCGCATTTT 32 RIL182_RS06045 intergenic 1294989 1295089 + down ATAAATGGGCGAAAATGCGTGTTTTGTGTTGAGATACAGATGCAAAATGCGCATTTTTCCGTTAAAATGGAGATAAGAAAAAGATAAGGAGGACATGACA TATTTCCGCATTGAAGGGCTGGTAAATAAATGGGCGAAAATGCGTGTTTTGTGTTGAGATACAGATGCAAAATGCGCATTTTTCCGTTAAAATGGAGATAAGAAAAAGATAAGGAGGACATGACATGTCATTCGAAATAAAAAAGATCCA TGTCATGTCCTCCTTATCTTTTTCTTATCTCCATTTTAACGGAAAAAT 48 TTerm_0800 NZ_LR027880.1 1299466 1299482 17 1299489 1299505 17 6 94 0 29 73 26 75 25 0 1299485 AAAATCCTGCAATATTT AAATGTTGCAGGATTTT True GTGTATAGA TTGCACTTT True True - AAAATCCTGCAACATTT TTACAT AAATATTGCAGGATTTT TCTATACAC 66 RIL182_RS06055 intergenic 1299430 1299681 + down AAAGTATTGCTGTCTGGAGATAAAAGAGTGTATAGAAAATCCTGCAATATTTATGTAAAAATGTTGCAGGATTTTTTGCACTTTGTTGCAGTTTGCGTTTCAGCCATTGCAAAGGAATTCGGATGCGTTATAATAGGATTATCAGAGAAAACGAAACAAATGCATCCTGCTTTTACGGGAAAGGAAAACAGACGGGATGACGTGGAACAAAATAAGAACAAATGATGTATTGTAAAAAGGAGGATTTAAGA ACTGATCCGTGATTTTAAGGCATAAAAAGTATTGCTGTCTGGAGATAAAAGAGTGTATAGAAAATCCTGCAATATTTATGTAAAAATGTTGCAGGATTTTTTGCACTTTGTTGCAGTTTGCGTTTCAGCCATTGCAAAGGAATTCGGATGCGTTATAATAGGATTATCAGAGAAAACGAAACAAATGCATCCTGCTTTTACGGGAAAGGAAAACAGACGGGATGACGTGGAACAAAATAAGAACAAATGATGTATTGTAAAAAGGAGGATTTAAGATGGTTTGGGAGAACGTACTGGCAAA TCTTAAATCCTCCTTTTTACAATACATCATTTGTTCTTATTTTGTTCCACGTCATCCCGTCTGTTTTCCTTTCCCGTAAAAGCAGGATGCATTTGTTTCGTTTTCTCTGATAATCCTATTATAACGCATCCGAATTCCTTTGCAATGGCTGAAACGCAAACTGCAACAAAGTGCAAAAAATCCTGCAACATTTTTACATAAATATTGCAGGATTT 215 TTerm_0801 NZ_LR027880.1 1309937 1309951 15 1309961 1309975 15 9 93 0 25 96 3 100 0 0 1309955 TAAAAAAGTTATAAA TTTATAAATTTTTTA True TGCAAAATT TAGGCGAAA True True - TAAAAAATTTATAAA TTAAACGAT TTTATAACTTTTTTA AATTTTGCA 50 RIL182_RS06095 intergenic 1309950 1310126 + down AATCGTTTAATTTATAAATTTTTTATAGGCGAAATGGGAAACATATGATATAATAAACATATGCAATAAGCAGTGCGGAATTATTTGTTTTCTGAACAAGTACTGCAATACGGGAATAATATGTATCATATGACTGTAAGATGTCACAGTCTGAAAATAGAAGGAGGGGAGCCCCA TTTTGCAAAATTAAAAAAGTTATAAAATCGTTTAATTTATAAATTTTTTATAGGCGAAATGGGAAACATATGATATAATAAACATATGCAATAAGCAGTGCGGAATTATTTGTTTTCTGAACAAGTACTGCAATACGGGAATAATATGTATCATATGACTGTAAGATGTCACAGTCTGAAAATAGAAGGAGGGGAGCCCCATGAACAAGATGGATGATTTAAAAGA TGGGGCTCCCCTCCTTCTATTTTCAGACTGTGACATCTTACAGTCATATGATACATATTATTCCCGTATTGCAGTACTTGTTCAGAAAACAAATAATTCCGCACTGCTTATTGCATATGTTTATTATATCATATGTTTCCCATTTCGCCTATAAAAAATTTATAAATTAAACGATTTTATAACTTTTTT 189 TTerm_0802 NZ_LR027880.1 1312446 1312464 19 1312473 1312491 19 8 84 0 23 47 52 43 56 0 1312468 TAAAACTCAGCCCTCTGCC GGCAGAGGGCCGTTTTTTA True CCTTAGATT CTTAACAGT True True - TAAAAAACGGCCCTCTGCC AATGAAAA GGCAGAGGGCTGAGTTTTA AATCTAAGG 78 RIL182_RS06110 intergenic 1312448 1312500 + down AACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTACTTAACAGT AACTGAATGTAAACCCTTAGATTAAAACTCAGCCCTCTGCCTTTTCATTGGCAGAGGGCCGTTTTTTACTTAACAGTTATTGAGCATCCCTTAATTGCTCTA ACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTTTT 54 TTerm_0803 NZ_LR027880.1 1312446 1312464 19 1312473 1312491 19 8 84 0 23 47 52 43 56 0 1312468 TAAAACTCAGCCCTCTGCC GGCAGAGGGCCGTTTTTTA True CCTTAGATT CTTAACAGT True True - TAAAAAACGGCCCTCTGCC AATGAAAA GGCAGAGGGCTGAGTTTTA AATCTAAGG 78 RIL182_RS06115 intergenic 1312448 1312500 - down ACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTT TAGAGCAATTAAGGGATGCTCAATAACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTTTTAATCTAAGGGTTTACATTCAGTT ACTGTTAAGTAAAAAACGGCCCTCTGCCAATGAAAAGGCAGAGGGCTGAGTTTT 54 TTerm_0804 NZ_LR027880.1 1315854 1315873 20 1315879 1315898 20 5 95 0 35 70 30 73 26 0 1315875 AATCTGTATGTATGAAAGGA TCCTTTGATACATACAGATT True CATGAAAAA ATCGCATAG True False - AATCTGTATGTATCAAAGGA TCATT TCCTTTCATACATACAGATT TTTTTCATG 86 RIL182_RS06125 intergenic 1315832 1315968 - down ACAACAATTCTATCAAAACTGTTAGATTTCATTTTCCGCCGGAAAGAATGTGGAAAGATTCCTATGCGATAATCTGTATGTATCAAAGGATCATTTCCTTTCATACATACAGATTTTTTCATGGAGGTACTCATTT CGTTTTCCATATTTCTGCCGAAATAACAACAATTCTATCAAAACTGTTAGATTTCATTTTCCGCCGGAAAGAATGTGGAAAGATTCCTATGCGATAATCTGTATGTATCAAAGGATCATTTCCTTTCATACATACAGATTTTTTCATGGAGGTACTCATTTATGGAAGTTTTACAGGCAAAAAACC ACAACAATTCTATCAAAACTGTTAGATTTCATTTTCCGCCGGAAAGAATGTGGAAAGATTCCTATGCGATAATCTGTATGTATCAAAGGATCATTTCCTTTCATACATACAGAT 114 TTerm_0805 NZ_LR027880.1 1320720 1320737 18 1320742 1320759 18 4 88 0 26 61 38 56 43 0 1320739 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True - AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT TCTTTTGTT 68 RIL182_RS06155 intergenic 1320586 1320763 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAACTCCGTTTCAAAAAACAGGACAACTTATTGATAGATGTAGATTTCTTTACATTAGCATGATACAATTAAGAAAGTGAAAAAACAGGACAGGAGGTAAGC GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAACTCCGTTTCAAAAAACAGGACAACTTATTGATAGATGTAGATTTCTTTACATTAGCATGATACAATTAAGAAAGTGAAAAAACAGGACAGGAGGTAAGCATGAACCAAGAATTGATGACATTGG AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGT 43 TTerm_0806 NZ_LR027880.1 1327531 1327548 18 1327553 1327570 18 4 88 0 26 61 38 56 43 0 1327550 AACCGATGGTTTTGACTA TAGTCTATACCATCGGTT True CATAAGAAA CTTTTGTTA True True - AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTTCTTATG 68 RIL182_RS06185 intergenic 1327527 1327604 + down GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCG CGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCGCAAACTTAAAGTATAAATATGGAAA CGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGT 73 TTerm_0807 NZ_LR027880.1 1335842 1335867 26 1335875 1335900 26 7 76 0 22 57 42 55 45 0 1335870 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True - AAAATTGATATCCCCTGCTTTGCCTG GAATTCA CAGGCAGAACAGGGGCTTTTATTTTT TTAAAGCGA 76 RIL182_RS06235 intergenic 1335694 1336038 + down AAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAACATAAAAGATACAAAAAAGAAATATTAATGTTCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA CACAGGCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAACATAAAAGATACAAAAAAGAAATATTAATGTTCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA TATAAGTTAGCAGTTTCTTCAATGCTAATTTTTCATTCAGGACACCTTCTTTCGTATGTTTTGTTCCATAACATAATTATACAATAAAAGGTGTCCTTTTTGAGTGATTATACAGAAAAAAACAGTAATTTGATACCCAAAATTGATATCCCCTGCTTTGCCTGGAATTCACAGGCAGAACAGGGGCTTTTATTTT 196 TTerm_0808 NZ_LR027880.1 1347622 1347634 13 1347644 1347656 13 9 84 0 16 65 34 63 36 0 1347638 CGCACTTTCTATT AATAGAATGTTCG True GTAAAAAAC CAGAGTGTG True False - CGAACATTCTATT GTCATGAAT AATAGAAAGTGCG GTTTTTTAC 40 RIL182_RS06275 intergenic 1347617 1347794 + down AAAACGCACTTTCTATTATTCATGACAATAGAATGTTCGCAGAGTGTGCATTCTATTGTATGAAATCTTCACAGAAGTTTAAATAAATTTTTGGTAAAAGTATGGTAAAATAGTAATTAGAAGGTAACCGGTCAGGAGAAGCCGTTACAAAATAATGTTTCTAAGGAGAAAGTCAAA GCGGTTGTTTGCACCTTTGATGTAAAAAACGCACTTTCTATTATTCATGACAATAGAATGTTCGCAGAGTGTGCATTCTATTGTATGAAATCTTCACAGAAGTTTAAATAAATTTTTGGTAAAAGTATGGTAAAATAGTAATTAGAAGGTAACCGGTCAGGAGAAGCCGTTACAAAATAATGTTTCTAAGGAGAAAGTCAAATGGAGTACATGGATATTGAAACAGT TTTGACTTTCTCCTTAGAAACATTATTTTGTAACGGCTTCTCCTGACCGGTTACCTTCTAATTACTATTTTACCATACTTTTACCAAAAATTTATTTAAACTTCTGTGAAGATTTCATACAATAGAATGCACACTCTGCGAACATTCTATTGTCATGAATAATAGAAAGTGC 172 TTerm_0809 NZ_LR027880.1 1350557 1350572 16 1350577 1350592 16 4 93 0 27 59 40 60 40 0 1350574 TAAAAAAGAGTGCCGG CCGACACTCTTTTTTA True ATACAACAT AATCCATTG True True - TAAAAAAGAGTGTCGG CTTT CCGGCACTCTTTTTTA ATGTTGTAT 86 RIL182_RS06295 intergenic 1350400 1350690 - down ATTACTACCAGCACAATCAGTAGTTTCACATGTACCTTTTTCTTTTTAAATAGAACCAGTTTTTATTTGTTAGATTAAGATATTGTAAACAATGGATTTAAAAAAGAGTGTCGGCTTTCCGGCACTCTTTTTTATGTTGTATTGAAGCAGAGCATAAAAAGTCCACATAAACTGGTCTGCTCATTTTTCACTTAACTGGCATTTTAAAATAAACCAGTGTGCGTTTAAGATAGGCATAAACAAATGACTGTTAAAAATCGGTCATACGAAACAAATGAGGAGAAAAGAAT CAACCAACGTTACAGTAGTAAAATAATTACTACCAGCACAATCAGTAGTTTCACATGTACCTTTTTCTTTTTAAATAGAACCAGTTTTTATTTGTTAGATTAAGATATTGTAAACAATGGATTTAAAAAAGAGTGTCGGCTTTCCGGCACTCTTTTTTATGTTGTATTGAAGCAGAGCATAAAAAGTCCACATAAACTGGTCTGCTCATTTTTCACTTAACTGGCATTTTAAAATAAACCAGTGTGCGTTTAAGATAGGCATAAACAAATGACTGTTAAAAATCGGTCATACGAAACAAATGAGGAGAAAAGAATATGAGCACAACATCTACAACAGCTG ATTACTACCAGCACAATCAGTAGTTTCACATGTACCTTTTTCTTTTTAAATAGAACCAGTTTTTATTTGTTAGATTAAGATATTGTAAACAATGGATTTAAAAAAGAGTGTCGGCTTTCCGGCACTCTTTTTT 133 TTerm_0810 NZ_LR027880.1 1373225 1373245 21 1373254 1373274 21 8 85 0 27 50 50 50 50 0 1373249 AAAACCCGTGCGTCTAAAACG CGTTTTGGATGCGCGGGTTTT True ATTACCTGA ATTTTTGAT True True - AAAACCCGCGCATCCAAAACG GTATGTTA CGTTTTAGACGCACGGGTTTT TCAGGTAAT 70 RIL182_RS06405 intergenic 1373197 1373642 + down AATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATAT TCCGACAGAGAATCCATTTGCATAAAATGTACATAAATTAATATATTACCTGAAAACCCGTGCGTCTAAAACGTAACATACCGTTTTGGATGCGCGGGTTTTATTTTTGATAATAGTATGTACATGGAGGAGTATGTTGTCATTGAAAAAAATTTTTTTCAGAATATCAATTTCTTGATTTTTTCAAGTTCTCAGGCTTTATTGAAAATACTGTTTCATACAATGCAAAGATTACTCTACATATAGAGACAATAGCTGCATTATATCGAACAGATTTATAAGAATCCTTGATTTTAGGCACTTTGAGATTTTTTTAGATTCAACCAGAGCGACAGAAAAAGGTAACGAAAGGTGATGCAATATAGTGCTTGAAAAACTCAAGCTGAGATTGAAAAAGTATCAGTATACATGATATAATACTGTATTATGAGAAGTTGAGTGAATACTATGGTGGAAGGAGTATATTATATTGACAGTTAGTTATGATAAGCTATG ATATAATATACTCCTTCCACCATAGTATTCACTCAACTTCTCATAATACAGTATTATATCATGTATACTGATACTTTTTCAATCTCAGCTTGAGTTTTTCAAGCACTATATTGCATCACCTTTCGTTACCTTTTTCTGTCGCTCTGGTTGAATCTAAAAAAATCTCAAAGTGCCTAAAATCAAGGATTCTTATAAATCTGTTCGATATAATGCAGCTATTGTCTCTATATGTAGAGTAATCTTTGCATTGTATGAAACAGTATTTTCAATAAAGCCTGAGAACTTGAAAAAATCAAGAAATTGATATTCTGAAAAAAATTTTTTTCAATGACAACATACTCCTCCATGTACATACTATTATCAAAAATAAAACCCGCGCATCCAAAACGGTATGTTACGTTTTAGACGCACGGGTTT 417 TTerm_0811 NZ_LR027880.1 1415569 1415576 8 1415581 1415588 8 4 100 0 16 50 50 50 50 0 1415578 TTGTGTGC GCACACAA True AAAACAAGT AGAAAAGGA True False - TTGTGTGC TCGT GCACACAA ACTTGTTTT 64 RIL182_RS06555 intergenic 1415421 1415608 + down ACACTGGAAAAGCATGTGCATATTTTGAAACAAAAACTTGTTTTGTGAAAAGTGTGCACATGCACGCAAAAAAGTTGTGCAAAATCATGAAAACACAAAAACACGGTTGAAGTTTTAAATAAAAGAGATTATCATAAGTAAAACAAGTTGTGTGCACGAGCACACAAAGAAAAGGAGAGGTATAGTA GATTGGGGAACTGTTTTATCGTTAAACACTGGAAAAGCATGTGCATATTTTGAAACAAAAACTTGTTTTGTGAAAAGTGTGCACATGCACGCAAAAAAGTTGTGCAAAATCATGAAAACACAAAAACACGGTTGAAGTTTTAAATAAAAGAGATTATCATAAGTAAAACAAGTTGTGTGCACGAGCACACAAAGAAAAGGAGAGGTATAGTATGAAATTTTTTATTGACACAGCAAA TACTATACCTCTCCTTTTCTTTGTGTGCTCGTGCACACA 39 TTerm_0812 NZ_LR027880.1 1416321 1416333 13 1416338 1416350 13 4 84 0 16 69 30 72 27 0 1416335 AAAAACTACAAAG CTTTGCGGTTTTT True ATGGTTTGA GGTGAATAA True True - AAAAACCGCAAAG CCGT CTTTGTAGTTTTT TCAAACCAT 56 RIL182_RS06560 intergenic 1416261 1416500 + down GGTTTTAAAAAAAGACTATAGAAACCGCTCTGCCGTCTTCGGAGAGTAAAAATGGTTTGAAAAACTACAAAGACGGCTTTGCGGTTTTTGGTGAATAAAAGATTGTGAAAGACGGTAGAAACCGCTCTGCCGTCTTCGGAGAGTAATAAAAATCATTGCGAAACCCGTCAGCAGCTTAACGTGAGAAGAGTTTGAGGTGGGTTTCGCAGAGTTTATATGACACTAAAGGAGGGTATCAA CTATAGAGCGGTTTTCGGTGACTAAGGTTTTAAAAAAAGACTATAGAAACCGCTCTGCCGTCTTCGGAGAGTAAAAATGGTTTGAAAAACTACAAAGACGGCTTTGCGGTTTTTGGTGAATAAAAGATTGTGAAAGACGGTAGAAACCGCTCTGCCGTCTTCGGAGAGTAATAAAAATCATTGCGAAACCCGTCAGCAGCTTAACGTGAGAAGAGTTTGAGGTGGGTTTCGCAGAGTTTATATGACACTAAAGGAGGGTATCAATGACTATCACAGAACTGAAGCAGAC TTGATACCCTCCTTTAGTGTCATATAAACTCTGCGAAACCCACCTCAAACTCTTCTCACGTTAAGCTGCTGACGGGTTTCGCAATGATTTTTATTACTCTCCGAAGACGGCAGAGCGGTTTCTACCGTCTTTCACAATCTTTTATTCACCAAAAACCGCAAAGCCGTCTTTGTAGTTTT 179 TTerm_0813 NZ_LR027880.1 1436342 1436351 10 1436360 1436369 10 8 100 0 20 40 60 40 60 0 1436355 AGCGGTCATG CATGACCGCT True CATGGAAAA GAATGGATA True False - AGCGGTCATG TTTCCGGG CATGACCGCT TTTTCCATG 64 RIL182_RS06675 intergenic 1436330 1436388 + down GGGCATGGAAAAGCGGTCATGCCCGGAAACATGACCGCTGAATGGATAAGTTAAATTT GGAAGCGGAAGCTGCTACAAAATGAGGGCATGGAAAAGCGGTCATGCCCGGAAACATGACCGCTGAATGGATAAGTTAAATTTTAGTTTGTTTCTTGCAGCCGTTCGT AAATTTAACTTATCCATTCAGCGGTCATGTTTCCGGGCATGACCGC 46 TTerm_0814 NZ_LR027880.1 1436342 1436351 10 1436360 1436369 10 8 100 0 20 40 60 40 60 0 1436355 AGCGGTCATG CATGACCGCT True CATGGAAAA GAATGGATA True False - AGCGGTCATG TTTCCGGG CATGACCGCT TTTTCCATG 64 RIL182_RS06680 intergenic 1436330 1436388 - down AAATTTAACTTATCCATTCAGCGGTCATGTTTCCGGGCATGACCGCTTTTCCATGCCC ACGAACGGCTGCAAGAAACAAACTAAAATTTAACTTATCCATTCAGCGGTCATGTTTCCGGGCATGACCGCTTTTCCATGCCCTCATTTTGTAGCAGCTTCCGCTTCC AAATTTAACTTATCCATTCAGCGGTCATGTTTCCGGGCATGACCGC 46 TTerm_0815 NZ_LR027880.1 1438828 1438853 26 1438861 1438886 26 7 76 0 22 57 42 55 45 0 1438856 AAAAATAAAAGCCCCTGTTCTGCCTG CAGGCAAAGCAGGGGATATCAATTTT True TCGCTTTAA GGGTATCAA True True - AAAATTGATATCCCCTGCTTTGCCTG GAATTCA CAGGCAGAACAGGGGCTTTTATTTTT TTAAAGCGA 76 RIL182_RS22380 intergenic 1438714 1439024 + down TAAGCAAAATCACAGGGTATCAAACAGTTCATGGCTAATTAAAGGGAACAAAAAGAAAGGAAAAGCACAATCCAGACGGTATCAGCGGCAGGCTACACAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATA ACTTCTATTACTTCTTTATCACACATAAGCAAAATCACAGGGTATCAAACAGTTCATGGCTAATTAAAGGGAACAAAAAGAAAGGAAAAGCACAATCCAGACGGTATCAGCGGCAGGCTACACAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGCA TATAAGTTAGCAGTTTCTTCAATGCTAATTTTTCATTCAGGACACCTTCTTTCGTATGTTTTGTTCCATAACATAATTATACAATAAAAGGTGTCCTTTTTGAGTGATTATACAGAAAAAAACAGTAATTTGATACCCAAAATTGATATCCCCTGCTTTGCCTGGAATTCACAGGCAGAACAGGGGCTTTTATTTT 196 TTerm_0816 NZ_LR027880.1 1445272 1445280 9 1445288 1445296 9 7 88 0 13 38 61 37 62 0 1445283 ATGAGGTGG CCACCCCAT True TGCCCAAAA CCACCAATT True False - ATGGGGTGG CGCTTTA CCACCTCAT TTTTGGGCA 66 RIL182_RS06740 intergenic 1445139 1445326 + down AAAACTTTCAATTTGCCACCCACACATCGGGTCAATTTGTCCCGAACTTTTACAACTAAATACCCGCCGCCCACACAGCGGCACACCAAGCAGGAAATCTGAAAAAGGTTGCCTGCTTTTTTTCTGCCCAAAATGAGGTGGTAAAGCGCCACCCCATCCACCAATTACCGAAAGGAGGGACACGAAA TTTTAATCTAGGAAGTATAAAGTAGAAAACTTTCAATTTGCCACCCACACATCGGGTCAATTTGTCCCGAACTTTTACAACTAAATACCCGCCGCCCACACAGCGGCACACCAAGCAGGAAATCTGAAAAAGGTTGCCTGCTTTTTTTCTGCCCAAAATGAGGTGGTAAAGCGCCACCCCATCCACCAATTACCGAAAGGAGGGACACGAAATGCCCTGTCCACACAACGAAATCAC TTTCGTGTCCCTCCTTTCGGTAATTGGTGGATGGGGTGGCGCTTTACCACCTCA 54 TTerm_0817 NZ_LR027880.1 1457560 1457570 11 1457575 1457585 11 4 81 0 12 95 4 100 0 0 1457572 TTGATAATATA TATATAATAAA True AAAAAAGAT ATATATCTG True False - TTTATTATATA ATTG TATATTATCAA ATCTTTTTT 24 RIL182_RS06795 intergenic 1457512 1457641 + down CCATAGGTGTAGAGTGACAATTATAATTGATAAAATTACAAAAAAGATTGATAATATACAATTATATAATAAAATATATCTGTAAAAGAAAATTACAAATAAGTTGATAAAATAGAAAAGATACAATAA TTACAGTTTTGGAAGATTAAATTAACCATAGGTGTAGAGTGACAATTATAATTGATAAAATTACAAAAAAGATTGATAATATACAATTATATAATAAAATATATCTGTAAAAGAAAATTACAAATAAGTTGATAAAATAGAAAAGATACAATAATGTTTGATATTAAAATTGTGTCTCT TTATTGTATCTTTTCTATTTTATCAACTTATTTGTAATTTTCTTTTACAGATATATTTTATTATATAATTGTATATTATCA 81 TTerm_0818 NZ_LR027880.1 1457589 1457597 9 1457605 1457613 9 7 88 0 13 83 16 87 12 0 1457600 TATCTGTAA TTACAAATA True ATAAAATAT AGTTGATAA True False - TATTTGTAA TTTTCTT TTACAGATA ATATTTTAT 34 RIL182_RS06795 intergenic 1457512 1457641 + down CCATAGGTGTAGAGTGACAATTATAATTGATAAAATTACAAAAAAGATTGATAATATACAATTATATAATAAAATATATCTGTAAAAGAAAATTACAAATAAGTTGATAAAATAGAAAAGATACAATAA TTACAGTTTTGGAAGATTAAATTAACCATAGGTGTAGAGTGACAATTATAATTGATAAAATTACAAAAAAGATTGATAATATACAATTATATAATAAAATATATCTGTAAAAGAAAATTACAAATAAGTTGATAAAATAGAAAAGATACAATAATGTTTGATATTAAAATTGTGTCTCT TTATTGTATCTTTTCTATTTTATCAACTTATTTGTAATTTTCTTTTACAGAT 52 TTerm_0819 NZ_LR027880.1 1476200 1476211 12 1476216 1476227 12 4 91 0 19 70 29 72 27 0 1476213 AAAAGACAATCA TGGTTGTCTTTT True ACTACCTGA TTGGTTTGC True True - AAAAGACAACCA TTTC TGATTGTCTTTT TCAGGTAGT 62 RIL182_RS06840 intergenic 1476150 1476713 + down CGAAGTAATATAGGATAGCTATATATCAAAATTTAATAGGCACTACCTGAAAAGACAATCAGAAATGGTTGTCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCA TGCGTTCTTTCCTTTCCGTCCCGCTTGATTTGACCATCTTTTACCCGATTGGTTACGGCAGATGTTATCTCTTCTGCAATACGAGACATACTCAAACTTATTGATTGTTCGCCCCTTTGCTCTATCTCCATTACAGAGACTTCTTCACTACTATGGGCTCGGCTGACTTCTCACAGTTCGTTGTTACTAGGCTAATGAAACCCCTGTGAGACCTCCACGCTTAAGGTGCACGCTCTTTCCTCTCATCTATCCGCCACATCTACTCGTACTTCCAGCAACTTTAGGACTTCATCTCTTTTGGCAGACTTATCCGTATTTCCGAGCCTTATATGTGATTTCTGTCCGTCGGACCAAGAGTTTGCTTACAGCTTCCTTCAGATTCCACCTCACGATGGACACCCTTGCTGTTCTGCTATACACTTCCTCGTTGCCTAGGCGTGTTCGGGACTTTCACCCATTAGAGCGCGCCCATGGCGCGCAAACCAAAAAAGACAACCATTTCTGATTGTCTTT 513 TTerm_0820 NZ_LR027880.1 1487427 1487444 18 1487450 1487467 18 5 88 0 26 66 33 68 31 0 1487446 AAGAAAACCAATAGATTC GAGTCTATTGGCTTTCTT True TTTAGAACA ACAGAGTGG True False - AAGAAAGCCAATAGACTC CTTGT GAATCTATTGGTTTTCTT TGTTCTAAA 76 RIL182_RS06885 intergenic 1487364 1487466 + down ACGCAGAGCCGATGAATTTGTGGGGAATTACCCACAGTTCATCGGCTTTTCTTTTTTAGAACAAGAAAACCAATAGATTCACAAGGAGTCTATTGGCTTTCT AGTCATCAAAGAGCCAGACGCTTAGACGCAGAGCCGATGAATTTGTGGGGAATTACCCACAGTTCATCGGCTTTTCTTTTTTAGAACAAGAAAACCAATAGATTCACAAGGAGTCTATTGGCTTTCTTACAGAGTGGGATGGTCTTGCTTAC AGAAAGCCAATAGACTCCTTGTGAATCTATTGGTTTTCT 39 TTerm_0821 NZ_LR027880.1 1487427 1487444 18 1487450 1487467 18 5 88 0 26 66 33 68 31 0 1487446 AAGAAAACCAATAGATTC GAGTCTATTGGCTTTCTT True TTTAGAACA ACAGAGTGG True False - AAGAAAGCCAATAGACTC CTTGT GAATCTATTGGTTTTCTT TGTTCTAAA 76 RIL182_RS06890 intergenic 1487364 1487466 - down AGAAAGCCAATAGACTCCTTGTGAATCTATTGGTTTTCTTGTTCTAAAAAAGAAAAGCCGATGAACTGTGGGTAATTCCCCACAAATTCATCGGCTCTGCGT GTAAGCAAGACCATCCCACTCTGTAAGAAAGCCAATAGACTCCTTGTGAATCTATTGGTTTTCTTGTTCTAAAAAAGAAAAGCCGATGAACTGTGGGTAATTCCCCACAAATTCATCGGCTCTGCGTCTAAGCGTCTGGCTCTTTGATGACT AGAAAGCCAATAGACTCCTTGTGAATCTATTGGTTTTCT 39 TTerm_0822 NZ_LR027880.1 1490769 1490775 7 1490780 1490786 7 4 100 0 14 42 57 42 57 0 1490777 TACAGGC GCCTGTA True ATCCAAAAT AGTGTACCT True False - TACAGGC TCAC GCCTGTA ATTTTGGAT 60 RIL182_RS06905 intergenic 1490660 1491160 + down ACTTGTCATTCTTGTAAAGCACATAATTTTTACAACACCGTTCATAGCAGACGGAAGTGGCTTATGTGCTTTTTGGACTGATAAGTCCGAAGTTGATTTTATCCAAAATACAGGCGTGAGCCTGTAAGTGTACCTTGACAATTTTATAGACAAATGCGTACAGGACGTGTGGAATATGTGGAGCCACTATGCGGACACGCCAAGAGCTGTCTGCTTTCCTATACAAATAAGGAAGGTTCTTATACGAAGAAATGCTGAAATAGGGTATTGAAGTAAAGACAAGGAGCGATAAATGTCTGGCAAAAAGTGAAGCAGTTGCACAGGGCGATGATACATATTTTTAATAATGATACTTCTGGAGATTTCCGGTCAACAAGGATTGACGGTGCGATACCGATGTGGGCGGTGTAATGAGCTGCCACCTGTACTGTATTTAAAAAATTTGTCTGCTGATGAGAGCCGGGAAAAGTTTTCGTGGTTGTCATGGGCAGATAAAGTCA TGGACCGGATAAACTGGAACTCTAAACTTGTCATTCTTGTAAAGCACATAATTTTTACAACACCGTTCATAGCAGACGGAAGTGGCTTATGTGCTTTTTGGACTGATAAGTCCGAAGTTGATTTTATCCAAAATACAGGCGTGAGCCTGTAAGTGTACCTTGACAATTTTATAGACAAATGCGTACAGGACGTGTGGAATATGTGGAGCCACTATGCGGACACGCCAAGAGCTGTCTGCTTTCCTATACAAATAAGGAAGGTTCTTATACGAAGAAATGCTGAAATAGGGTATTGAAGTAAAGACAAGGAGCGATAAATGTCTGGCAAAAAGTGAAGCAGTTGCACAGGGCGATGATACATATTTTTAATAATGATACTTCTGGAGATTTCCGGTCAACAAGGATTGACGGTGCGATACCGATGTGGGCGGTGTAATGAGCTGCCACCTGTACTGTATTTAAAAAATTTGTCTGCTGATGAGAGCCGGGAAAAGTTTTCGTGGTTGTCATGGGCAGATAAAGTCATGCAGAGAATTAGAGAAATGGAGGT TGACTTTATCTGCCCATGACAACCACGAAAACTTTTCCCGGCTCTCATCAGCAGACAAATTTTTTAAATACAGTACAGGTGGCAGCTCATTACACCGCCCACATCGGTATCGCACCGTCAATCCTTGTTGACCGGAAATCTCCAGAAGTATCATTATTAAAAATATGTATCATCGCCCTGTGCAACTGCTTCACTTTTTGCCAGACATTTATCGCTCCTTGTCTTTACTTCAATACCCTATTTCAGCATTTCTTCGTATAAGAACCTTCCTTATTTGTATAGGAAAGCAGACAGCTCTTGGCGTGTCCGCATAGTGGCTCCACATATTCCACACGTCCTGTACGCATTTGTCTATAAAATTGTCAAGGTACACTTACAGGCTCACGCCTGT 391 TTerm_0823 NZ_LR027880.1 1491461 1491479 19 1491489 1491507 19 9 73 0 13 63 36 71 28 0 1491483 AAGAAAGCTTGGTATGATA TATCGTGCTAGGGTTTCTT True AGTGGAAAA CGTGGAAAG True False - AAGAAACCCTAGCACGATA GGACAATTA TATCATACCAAGCTTTCTT TTTTCCACT 42 RIL182_RS06910 intergenic 1491420 1491529 + down TTGAAAAAAACAAAGATAATTTAATACTTTAAAGTGGAAAAAGAAAGCTTGGTATGATATAATTGTCCTATCGTGCTAGGGTTTCTTCGTGGAAAGGAGCGAAGGCGTT TCTTAATCAGATTACATCCCTTTGATTGAAAAAAACAAAGATAATTTAATACTTTAAAGTGGAAAAAGAAAGCTTGGTATGATATAATTGTCCTATCGTGCTAGGGTTTCTTCGTGGAAAGGAGCGAAGGCGTTTGAACGAAAGAAAACGTGACCAGAA AACGCCTTCGCTCCTTTCCACGAAGAAACCCTAGCACGATAGGACAATTATATCATACCAAGCTTTCT 68 TTerm_0824 NZ_LR027880.1 1499499 1499504 6 1499512 1499517 6 7 100 0 12 66 33 66 33 0 1499507 TTGCAA TTGCAA True AAAAAAAGT AGAAGAAAT True False - TTGCAA TATTTTT TTGCAA ACTTTTTTT 40 RIL182_RS06925 intergenic 1499457 1499993 + down TGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATA AACCTGCAAAATTACTGTAAAATAATGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATATGGAATTCATGACAGGTGTAAACAA TATTCTGTACACTCCTTTAGATATGATAAGGTGCGGGACGGGAACCTTTTTGAAAAACAAAACTCTGTCTTTCAGATTTTCAACAAATAATAGAATGCACGCTCCGCGAACATTCTATTATCATGAATACAAAAAACCCCGGAAAAGCATATGCTTTTCCGGGGCGAAATCTCTTAGTATCCCGCGGTACCACCCGCATTGAAAAATGATGTCGTTCTCATCATCTTTCCGCTCTCTGTGCTTAACGCGCACCCACGTACTGACCTACTTTCGATCCACTGCCGCTGTTTTTAAGATCAACCGCTCGTGCAAATTCCTGTTCAATCAGTCTGCTCCAGAGTGTTCCCTTGACCTTCTCTTTCAAACAGCGCTCTCAGTCGGTGACGCTGTATTCCTGTCGACGTCTGAAGATCAGAGTCTCTTTCATCGCTTTACTGTTTTAACGTTGTAACATTTATACCACATAGATTTCTTCTTTGCAATATTTTTTTGCA 494 TTerm_0825 NZ_LR027880.1 1499920 1499928 9 1499935 1499943 9 6 88 0 13 72 27 75 25 0 1499931 TGAAAGACA TGTTTTTCA True TGAAAATCT AAAAGGTTC True False - TGAAAAACA AAACTC TGTCTTTCA AGATTTTCA 34 RIL182_RS06925 intergenic 1499457 1499993 + down TGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATA AACCTGCAAAATTACTGTAAAATAATGTTGGTGCATCAATAAAAATGCAGCATAAAACAAAAAAAGTTGCAAAAAAATATTGCAAAGAAGAAATCTATGTGGTATAAATGTTACAACGTTAAAACAGTAAAGCGATGAAAGAGACTCTGATCTTCAGACGTCGACAGGAATACAGCGTCACCGACTGAGAGCGCTGTTTGAAAGAGAAGGTCAAGGGAACACTCTGGAGCAGACTGATTGAACAGGAATTTGCACGAGCGGTTGATCTTAAAAACAGCGGCAGTGGATCGAAAGTAGGTCAGTACGTGGGTGCGCGTTAAGCACAGAGAGCGGAAAGATGATGAGAACGACATCATTTTTCAATGCGGGTGGTACCGCGGGATACTAAGAGATTTCGCCCCGGAAAAGCATATGCTTTTCCGGGGTTTTTTGTATTCATGATAATAGAATGTTCGCGGAGCGTGCATTCTATTATTTGTTGAAAATCTGAAAGACAGAGTTTTGTTTTTCAAAAAGGTTCCCGTCCCGCACCTTATCATATCTAAAGGAGTGTACAGAATATGGAATTCATGACAGGTGTAAACAA TATTCTGTACACTCCTTTAGATATGATAAGGTGCGGGACGGGAACCTTTTTGAAAAACAAAACTCTGTCTTTC 73 TTerm_0826 NZ_LR027880.1 1501384 1501394 11 1501399 1501409 11 4 81 0 12 77 22 88 11 0 1501396 CAAAATTGAAT ATTGAGTTTTG True ATCAGGTTC CAAACAGGG True True - CAAAACTCAAT TTAC ATTCAATTTTG GAACCTGAT 40 RIL182_RS06930 intergenic 1501324 1501525 + down TCAGGTTAGAACAGATGCAAAGAATCCAAAACAAAATAATTTTAGATCCATATCAGGTTCAAAATTGAATGTAAATTGAGTTTTGCAAACAGGGATCATATGAATGAAAAAGGAGAACAGCCGTGAAACATTTGGGAACAAAAACAATCGAAACAAGACGTCTTGTTTTAAGACGATTTACACTTTCCGATGCAGAACCGA TGATTTAAGCAGATTAGAGCCGTAATCAGGTTAGAACAGATGCAAAGAATCCAAAACAAAATAATTTTAGATCCATATCAGGTTCAAAATTGAATGTAAATTGAGTTTTGCAAACAGGGATCATATGAATGAAAAAGGAGAACAGCCGTGAAACATTTGGGAACAAAAACAATCGAAACAAGACGTCTTGTTTTAAGACGATTTACACTTTCCGATGCAGAACCGATGTACCGCAACTGGGCATCGGATCC TCGGTTCTGCATCGGAAAGTGTAAATCGTCTTAAAACAAGACGTCTTGTTTCGATTGTTTTTGTTCCCAAATGTTTCACGGCTGTTCTCCTTTTTCATTCATATGATCCCTGTTTGCAAAACTCAATTTACATTCAATTTT 141 TTerm_0827 NZ_LR027880.1 1505384 1505398 15 1505406 1505420 15 7 100 0 30 73 26 73 26 0 1505401 AAAAATATGAGGACT AGTCCTCATATTTTT True ATGTGTATA GCGATAGCT True True - AAAAATATGAGGACT TTTTTTC AGTCCTCATATTTTT TATACACAT 84 RIL182_RS06945 intergenic 1505351 1505685 + down GGTATTATATTTGATACCAACATCATGTGTATAAAAATATGAGGACTGAAAAAAAGTCCTCATATTTTTGCGATAGCTTGACAATCTTGTTTATGCGTGCATATACTAAGATAATTGCGAAACTCATTCATGAACTGGCGATGTTGTGGAAAATTGACAGATGAAAAAGAAAGTGCTGGGGAGCCGTCGGTACTTAGTGACTGTATTTTGGTCACTTAGTATCCGCTACGAGCGACACGCAGCGAGAGCGTGCTTTCGTTTCAGCTGTCAATTTCCCACAACGTTCACAGCCTAAAGCAGAGTTTCGCCCAGGTAACTGTTTTATTGAATAGCA CCAGATATTAAAAGAGTTACTGTAAGGTATTATATTTGATACCAACATCATGTGTATAAAAATATGAGGACTGAAAAAAAGTCCTCATATTTTTGCGATAGCTTGACAATCTTGTTTATGCGTGCATATACTAAGATAATTGCGAAACTCATTCATGAACTGGCGATGTTGTGGAAAATTGACAGATGAAAAAGAAAGTGCTGGGGAGCCGTCGGTACTTAGTGACTGTATTTTGGTCACTTAGTATCCGCTACGAGCGACACGCAGCGAGAGCGTGCTTTCGTTTCAGCTGTCAATTTCCCACAACGTTCACAGCCTAAAGCAGAGTTTCGCCCAGGTAACTGTTTTATTGAATAGCATGGAAAGAAGGAGCAAAATGACCTA TGCTATTCAATAAAACAGTTACCTGGGCGAAACTCTGCTTTAGGCTGTGAACGTTGTGGGAAATTGACAGCTGAAACGAAAGCACGCTCTCGCTGCGTGTCGCTCGTAGCGGATACTAAGTGACCAAAATACAGTCACTAAGTACCGACGGCTCCCCAGCACTTTCTTTTTCATCTGTCAATTTTCCACAACATCGCCAGTTCATGAATGAGTTTCGCAATTATCTTAGTATATGCACGCATAAACAAGATTGTCAAGCTATCGCAAAAATATGAGGACTTTTTTTCAGTCCTCATATTTT 301 TTerm_0828 NZ_LR027880.1 1506251 1506270 20 1506275 1506294 20 4 100 0 40 70 30 70 30 0 1506272 AAAACGGGCATATATAAAGT ACTTTATATATGCCCGTTTT True TGGAGACTA TCATGCAAA True True - AAAACGGGCATATATAAAGT GAAA ACTTTATATATGCCCGTTTT TAGTCTCCA 88 RIL182_RS06950 intergenic 1506218 1506307 + down AATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTTTCATGCAAAATGT GAAACAGATTCGTTCAGAATTATAGAATGTTTGTGAGTTTGACCAAAAATGGAGACTAAAACGGGCATATATAAAGTTTTCACTTTATATATGCCCGTTTTTCATGCAAAATGTTAGCCTTCCGCAAGATTTCCCGTGT ACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTT 56 TTerm_0829 NZ_LR027880.1 1506251 1506270 20 1506275 1506294 20 4 100 0 40 70 30 70 30 0 1506272 AAAACGGGCATATATAAAGT ACTTTATATATGCCCGTTTT True TGGAGACTA TCATGCAAA True True - AAAACGGGCATATATAAAGT GAAA ACTTTATATATGCCCGTTTT TAGTCTCCA 88 RIL182_RS06955 intergenic 1506218 1506307 - down ACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTTTAGTCTCCATTTTTGGTCAAACTCACAAACATT ACACGGGAAATCTTGCGGAAGGCTAACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTTTAGTCTCCATTTTTGGTCAAACTCACAAACATTCTATAATTCTGAACGAATCTGTTTC ACATTTTGCATGAAAAACGGGCATATATAAAGTGAAAACTTTATATATGCCCGTTT 56 TTerm_0830 NZ_LR027880.1 1535812 1535826 15 1535833 1535847 15 6 100 0 30 60 40 60 40 0 1535829 AAAATACTGCCGGAT ATCCGGCAGTATTTT True AAAAACATA TTATTCCAG True True - AAAATACTGCCGGAT CCATCA ATCCGGCAGTATTTT TATGTTTTT 92 RIL182_RS07095 intergenic 1535779 1535867 + down AAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTTTTATTCCAGTATTTTATTGT CTGCTGTTGTTTAAGGCCGTTTTAGAAGCGGGATAAAGTCTTGCCACGGAAAAACATAAAATACTGCCGGATTGATGGATCCGGCAGTATTTTTTATTCCAGTATTTTATTGTTAACGGCGGTTTGGATTTGTATATT ACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTT 55 TTerm_0831 NZ_LR027880.1 1535812 1535826 15 1535833 1535847 15 6 100 0 30 60 40 60 40 0 1535829 AAAATACTGCCGGAT ATCCGGCAGTATTTT True AAAAACATA TTATTCCAG True True - AAAATACTGCCGGAT CCATCA ATCCGGCAGTATTTT TATGTTTTT 92 RIL182_RS07100 intergenic 1535779 1535867 - down ACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTTTATGTTTTTCCGTGGCAAGACTTTATCCCGCTT AATATACAAATCCAAACCGCCGTTAACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTTTATGTTTTTCCGTGGCAAGACTTTATCCCGCTTCTAAAACGGCCTTAAACAACAGCAG ACAATAAAATACTGGAATAAAAAATACTGCCGGATCCATCAATCCGGCAGTATTT 55 TTerm_0832 NZ_LR027880.1 1551503 1551521 19 1551529 1551547 19 7 89 0 28 52 47 52 47 0 1551524 AAAAAGACGGAATCAGCCA TGGCGGGTTCCGTCTTTTT True AATCATAGA GCAAAACAG True True - AAAAAGACGGAACCCGCCA TAAAAAT TGGCTGATTCCGTCTTTTT TCTATGATT 96 RIL182_RS07170 intergenic 1551502 1551610 + down AAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTTGCAAAACAGTTATTGTTTTCGGCAGCCAGTGTGGTAGTCAGCGGAGGATTGGTTCTTCTGCTT TGCGGCAATGGCGGATGAATCATAGAAAAAGACGGAATCAGCCAATTTTTATGGCGGGTTCCGTCTTTTTGCAAAACAGTTATTGTTTTCGGCAGCCAGTGTGGTAGTCAGCGGAGGATTGGTTCTTCTGCTTTACAGGTATATCGGGCTTACAGGTG AAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTT 107 TTerm_0833 NZ_LR027880.1 1551503 1551521 19 1551529 1551547 19 7 89 0 28 52 47 52 47 0 1551524 AAAAAGACGGAATCAGCCA TGGCGGGTTCCGTCTTTTT True AATCATAGA GCAAAACAG True True - AAAAAGACGGAACCCGCCA TAAAAAT TGGCTGATTCCGTCTTTTT TCTATGATT 96 RIL182_RS22150 intergenic 1551502 1551610 - down AAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTTT CACCTGTAAGCCCGATATACCTGTAAAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTTTCTATGATTCATCCGCCATTGCCGCA AAGCAGAAGAACCAATCCTCCGCTGACTACCACACTGGCTGCCGAAAACAATAACTGTTTTGCAAAAAGACGGAACCCGCCATAAAAATTGGCTGATTCCGTCTTTT 107 TTerm_0834 NZ_LR027880.1 1553119 1553130 12 1553138 1553149 12 7 83 0 14 58 41 60 40 0 1553133 ATAATGTACCGC GCGTTACCTTAT True AAAATATTA CCCAACAGG True False - ATAAGGTAACGC CGCCTGT GCGGTACATTAT TAATATTTT 52 RIL182_RS07185 intergenic 1552738 1553334 + down GTTCATGAAAGGTCATAAATGAAATATATAAAATGGGGGACAAGATGGGGGACAACCACATGAAAAGTCCTTGAAACACTAGAAAAATAAGAAAGAAGGAAAATAAAATGAAACTTGGAATCGTTGTAAATTAGCCTTTTTTCATAAATCTATATACATCAATAAAAGTCCGTAAAACCGCATGGTTACAAAGTTTTTTGAAATTGTAAATTCATAAAACTTCATACAAAATCATATACTTTCATGCCATTTGGGTGTAGAAATGGGTGTAAAAAGATAGTCGAAAACCAGAGTCCAACGCATTTTATGTATTGATAAATGGGCATACAGATTTCTACGGATAGAACCATATAGCATGATAGAACAGAAGTTAAAATATTATAATGTACCGCACAGGCGGCGTTACCTTATCCCAACAGGGAAACAAGGAACGCCGCTATTTTTTTACCCTCATGTTACGCAGTAGGGGCAAAAAGAGCTTTGCTACATAAGGCTTTGCGGGTGCGGTTTTCACACAGTAAGGGATTGATACCTAAACCCTCAAAATTGCTGTTCTACTGCGTAACAAATATGAAGCAAAGGAGTTGATGAAGCTA TAGCTTCATCAACTCCTTTGCTTCATATTTGTTACGCAGTAGAACAGCAATTTTGAGGGTTTAGGTATCAATCCCTTACTGTGTGAAAACCGCACCCGCAAAGCCTTATGTAGCAAAGCTCTTTTTGCCCCTACTGCGTAACATGAGGGTAAAAAAATAGCGGCGTTCCTTGTTTCCCTGTTGGGATAAGGTAACGCCGCCTGTGCGGTACATTA 215 TTerm_0835 NZ_LR027880.1 1558012 1558034 23 1558041 1558064 24 6 87 4 26 68 31 71 28 0 1558037 AGAAAGCATTGAGAATATTTCAA TTGAAAGTACTCTCAGTGCTTTCT True CAAAAAATA TTGATAATA True False - AGAAAGCACTGAGAGTACTTTCAA GAAATT TTGAAATATTCTCAATGCTTTCT TATTTTTTG 60 RIL182_RS07220 intergenic 1557974 1558089 + down CATAGTATCATTACCGGCAAGTTTATAATCAAAAAATAGAAAGCATTGAGAATATTTCAAAATTTCTTGAAAGTACTCTCAGTGCTTTCTTTGATAATATGAAAGGAGAAATAAA AGGTTACGCGAAAGAGATAAATTAACATAGTATCATTACCGGCAAGTTTATAATCAAAAAATAGAAAGCATTGAGAATATTTCAAAATTTCTTGAAAGTACTCTCAGTGCTTTCTTTGATAATATGAAAGGAGAAATAAATGCAAAAAAAACAACTTTCTGTATT TTTATTTCTCCTTTCATATTATCAAAGAAAGCACTGAGAGTACTTTCAAGAAATTTTGAAATATTCTCAATGCTTTC 77 TTerm_0836 NZ_LR027880.1 1566926 1566948 23 1566955 1566977 23 6 95 0 41 63 36 63 36 0 1566951 AAATAAAAACAGCCGCTGTAGGA TCCTACAACGGCTGTTTTTATTT True AGATTCATA CCACGGCCT True True - AAATAAAAACAGCCGTTGTAGGA TTTTGT TCCTACAGCGGCTGTTTTTATTT TATGAATCT 106 RIL182_RS07280 intergenic 1566927 1566972 + down ATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTT GTCTTTTGTTGGAGAAGATTCATAAATAAAAACAGCCGCTGTAGGAACAAAATCCTACAACGGCTGTTTTTATTTCCACGGCCTGCGCCGGAAGT AAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTATT 46 TTerm_0837 NZ_LR027880.1 1566926 1566948 23 1566955 1566977 23 6 95 0 41 63 36 63 36 0 1566951 AAATAAAAACAGCCGCTGTAGGA TCCTACAACGGCTGTTTTTATTT True AGATTCATA CCACGGCCT True True - AAATAAAAACAGCCGTTGTAGGA TTTTGT TCCTACAGCGGCTGTTTTTATTT TATGAATCT 106 RIL182_RS07285 intergenic 1566927 1566972 - down AAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTAT ACTTCCGGCGCAGGCCGTGGAAATAAAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTATTTATGAATCTTCTCCAACAAAAGAC AAAACAGCCGTTGTAGGATTTTGTTCCTACAGCGGCTGTTTTTATT 46 TTerm_0838 NZ_LR027880.1 1575683 1575690 8 1575696 1575703 8 5 87 0 11 93 6 100 0 0 1575692 AAAAAATT AATTTCTT True CGGTTCTAA GACACGCCG True False - AAGAAATT TATGG AATTTTTT TTAGAACCG 30 RIL182_RS07340 intergenic 1575658 1575748 + down CCTGTTCCCGCCGGGGCGGTTCTAAAAAAATTCCATAAATTTCTTGACACGCCGCCGCCCGCCATCGAGCAGAGTTTTACACCTATTTTG GGAGGTGGAACAGGTCACGGCCTGACCTGTTCCCGCCGGGGCGGTTCTAAAAAAATTCCATAAATTTCTTGACACGCCGCCGCCCGCCATCGAGCAGAGTTTTACACCTATTTTGGTATGAAACAGCTCATGGCAGGCGG CAAAATAGGTGTAAAACTCTGCTCGATGGCGGGCGGCGGCGTGTCAAGAAATTTATGGAATTTTT 65 TTerm_0839 NZ_LR027880.1 1579471 1579477 7 1579486 1579492 7 8 100 0 14 42 57 42 57 0 1579481 CTTTGCC GGCAAAG True TTCAAAAAC CAAAAAGTC True False - CTTTGCC AAAAAGAG GGCAAAG GTTTTTGAA 52 RIL182_RS07375 intergenic 1579108 1579565 + down AAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCA ATCTTGCGAATTTACGATAAGGTAAAAATTCTCTACTTCATAAGCATGAAATAAAAAAAACCGCTTATGAAGTAGAAAGTTCTCATGCCATTTTAACGGCGGTTTTGAAATAACAATCAAAACCGTCGTTTTCTTTTGAAAATCTAAAACAGAGGACATATTAAAATCCTGCTATTTGGGGACACGACGGTATCAAGGAGGTATCGCCATGTCCTTTTTTCTATACCCTAATGGGTTACTATCAAAAAAAGCCATTATCCACCGACGGGGTATTCCGGCTATGTAGATGAACTATCAAATCAATTAAATACTGCTGTTATTTCCTATGCGTCTGTCTGCATTTTGCAGGCAGGCGCATTTCGCATTTTACAGAAGATTTTTCAAAAACTTTGCCCTCTTTTTGGCAAAGCAAAAAGTCGCCTGTATTATCCCGCGAAAAGGGGAGGTACTACCGCCTTTCGGCAGAAAGGAGGTGAACACCATGACACCTAATCGCAGGGAATTTGA TGGTGTTCACCTCCTTTCTGCCGAAAGGCGGTAGTACCTCCCCTTTTCGCGGGATAATACAGGCGACTTTTTGCTTTGCCAAAAAGAGGGCAAA 94 TTerm_0840 NZ_LR027880.1 1584903 1584910 8 1584917 1584924 8 6 100 0 16 75 25 75 25 0 1584913 CATACAAA TTTGTATG True AAAATATAC AAAATGAGG True False - CATACAAA TTTGGG TTTGTATG GTATATTTT 40 RIL182_RS07415 intergenic 1584751 1584944 + down ACAGAACATTGATGATGGAAAGGGGATTGCCTGTGGGTGATTCTCTTTTTTACTGGATATTTTTTGGAAAGTATAGTACACTGTACTTTGTATGAAAATTTACATGAAAAAATATGTATGCAGACCAAATTTGCAGGCAAATAAAAATATACATACAAACCCAAATTTGTATGAAAATGAGGATAAGAAAATA TCCGAATGAGAATTTCTCATTGTAAACAGAACATTGATGATGGAAAGGGGATTGCCTGTGGGTGATTCTCTTTTTTACTGGATATTTTTTGGAAAGTATAGTACACTGTACTTTGTATGAAAATTTACATGAAAAAATATGTATGCAGACCAAATTTGCAGGCAAATAAAAATATACATACAAACCCAAATTTGTATGAAAATGAGGATAAGAAAATATGATGGAAAAGTTCTATCCGGATGA TATTTTCTTATCCTCATTTTCATACAAATTTGGGTTTGTAT 41 TTerm_0841 NZ_LR027880.1 1599591 1599600 10 1599608 1599617 10 7 80 0 10 75 25 75 25 0 1599603 TGTGCATATT AATAATCACA True AAGAAAAAT AATATTGAC True False - TGTGATTATT TTTGTGT AATATGCACA ATTTTTCTT 20 RIL182_RS22285 intergenic 1599176 1599760 + down AAGACTTATAGTTGCAAGCAAAAAGCATGCGGTTCTATATAAATTTAGAAGCGGCATGCTTTTTTTGGGATTCATGTCAAAAAACGCAAATTCACAAAAATACATGCGAATAAAGTCTGAAAATTACCGTATATCCGGAAAATGACAACTGCTATAATGAAATCTGCGTCGACAAATGAAAAAAGTACATGTGGTAAACAAAAATTTTTTTACCTAAAGTTATCAGACAACACGCAATATGACGCGGAAATAAGAGAAAAAATATAAAATAGTACTTATTTACCACACAACGGTTTCTGTGGATATTGAACGAAAAGCGGCACGAAAATAACTTAAAAAATAAAAAATTAAGTAAATGTGAACAAAGTGTGAAAATCCAATAAAATATCTTCTACAAAAAGCAGAAAAGAAAAATGTGCATATTACACAAAAATAATCACAAATATTGACATATAATAATGCAATATATATAATTAAAATTAAGTTAACGATAACTTAAAAGTTAATAGGACTAATAAAATTAGCTGGAAGGGTTTGAGGGGAAGAAATATTGTTATAAATTAAGAGGGGGATAGCCGTGAGAA TTCTCACGGCTATCCCCCTCTTAATTTATAACAATATTTCTTCCCCTCAAACCCTTCCAGCTAATTTTATTAGTCCTATTAACTTTTAAGTTATCGTTAACTTAATTTTAATTATATATATTGCATTATTATATGTCAATATTTGTGATTATTTTTGTGTAATATGCAC 169 TTerm_0842 NZ_LR027880.1 1599656 1599663 8 1599668 1599675 8 4 100 0 16 87 12 87 12 0 1599665 TTAAGTTA TAACTTAA True AATTAAAAT AAGTTAATA True False - TTAAGTTA TCGT TAACTTAA ATTTTAATT 40 RIL182_RS22285 intergenic 1599176 1599760 + down AAGACTTATAGTTGCAAGCAAAAAGCATGCGGTTCTATATAAATTTAGAAGCGGCATGCTTTTTTTGGGATTCATGTCAAAAAACGCAAATTCACAAAAATACATGCGAATAAAGTCTGAAAATTACCGTATATCCGGAAAATGACAACTGCTATAATGAAATCTGCGTCGACAAATGAAAAAAGTACATGTGGTAAACAAAAATTTTTTTACCTAAAGTTATCAGACAACACGCAATATGACGCGGAAATAAGAGAAAAAATATAAAATAGTACTTATTTACCACACAACGGTTTCTGTGGATATTGAACGAAAAGCGGCACGAAAATAACTTAAAAAATAAAAAATTAAGTAAATGTGAACAAAGTGTGAAAATCCAATAAAATATCTTCTACAAAAAGCAGAAAAGAAAAATGTGCATATTACACAAAAATAATCACAAATATTGACATATAATAATGCAATATATATAATTAAAATTAAGTTAACGATAACTTAAAAGTTAATAGGACTAATAAAATTAGCTGGAAGGGTTTGAGGGGAAGAAATATTGTTATAAATTAAGAGGGGGATAGCCGTGAGAA TTCTCACGGCTATCCCCCTCTTAATTTATAACAATATTTCTTCCCCTCAAACCCTTCCAGCTAATTTTATTAGTCCTATTAACTTTTAAGTTATCGTTAACTTA 104 TTerm_0843 NZ_LR027880.1 1612816 1612840 25 1612848 1612872 25 7 80 0 25 74 26 85 15 0 1612843 GAAAAGAACTGTGCAAAAGAAATAT ATATCTGTTTTGCAGAATTTTTTTC True TTTATTAAG AGGGAAAAG True True - GAAAAAAATTCTGCAAAACAGATAT CGGTCAA ATATTTCTTTTGCACAGTTCTTTTC CTTAATAAA 58 RIL182_RS07515 intergenic 1612729 1612893 + down TGAACTGGTATGATCTGGATGTCAAAAGGTATTCCGTGTTTGGCATAACCTTTTGACATCCGGAGCAGAATCAAAGTATTTATTAAGAAAAGAACTGTGCAAAAGAAATATTTGACCGATATCTGTTTTGCAGAATTTTTTTCAGGGAAAAGGGGCGAAGAACA GATTGATACGTTGAAGATCCAGTAGTGAACTGGTATGATCTGGATGTCAAAAGGTATTCCGTGTTTGGCATAACCTTTTGACATCCGGAGCAGAATCAAAGTATTTATTAAGAAAAGAACTGTGCAAAAGAAATATTTGACCGATATCTGTTTTGCAGAATTTTTTTCAGGGAAAAGGGGCGAAGAACATGAACAGTATGTTTGGACCGGAGAC TGTTCTTCGCCCCTTTTCCCTGAAAAAAATTCTGCAAAACAGATATCGGTCAAATATTTCTTTTGCACAGTTCTTTT 77 TTerm_0844 NZ_LR027880.1 1615805 1615816 12 1615826 1615837 12 9 83 0 14 75 25 80 20 0 1615820 AAGCAAGTTGTT AACAAATTGTTT True AAAACTTGA TGAAATGAG True True - AAACAATTTGTT TTGCCAGGG AACAACTTGCTT TCAAGTTTT 36 RIL182_RS07530 intergenic 1615798 1615854 + down AACTTGAAGCAAGTTGTTCCCTGGCAAAACAAATTGTTTTGAAATGAGGATTATTA TGATACGGAGATTGGAAGAAGATAAAACTTGAAGCAAGTTGTTCCCTGGCAAAACAAATTGTTTTGAAATGAGGATTATTATGAAGTTAAATAAGTTGGGAAAGTT TAATAATCCTCATTTCAAAACAATTTGTTTTGCCAGGGAACAACTTGCT 49 TTerm_0845 NZ_LR027880.1 1637930 1637936 7 1637942 1637948 7 5 100 0 14 100 0 100 0 0 1637938 AAAATAA TTATTTT True TGAAATAAA ATGAGAGGT True False - AAAATAA TATTT TTATTTT TTTATTTCA 28 RIL182_RS07600 intergenic 1637929 1637965 + down AAAATAAAAATATTATTTTATGAGAGGTAGAAAAAA TGGCATTTTAGCTCTCATGAAATAAAAAATAAAAATATTATTTTATGAGAGGTAGAAAAAATGCAGATTCTTATTTGGGTTATGAT TTTTTTCTACCTCTCATAAAATAATATTTTTATTT 35 TTerm_0846 NZ_LR027880.1 1651911 1651918 8 1651923 1651930 8 4 87 0 11 93 6 100 0 0 1651920 AAAAATTT AAATTCTT True TGAAAAATA GACTTGAAG True False - AAGAATTT TTTT AAATTTTT TATTTTTCA 30 RIL182_RS07660 intergenic 1651912 1651984 + down AAATTTAAAAAAATTCTTGACTTGAAGTCCACTTCATGGACTATACTCTTCGAAAAAAGGAGGTAATGTTCA AGGCAGAAATTCAACTGAAAAATAAAAATTTAAAAAAATTCTTGACTTGAAGTCCACTTCATGGACTATACTCTTCGAAAAAAGGAGGTAATGTTCATGATGACAGAAAAAATGATAACATT TGAACATTACCTCCTTTTTTCGAAGAGTATAGTCCATGAAGTGGACTTCAAGTCAAGAATTTTTTTAAATTTT 73 TTerm_0847 NZ_LR027880.1 1658937 1658945 9 1658950 1658958 9 4 88 0 13 50 50 50 50 0 1658947 AAAAGGGCG CGTCCTTTT True AATTCATGA TTTGTGCTC True True - AAAAGGACG AAAC CGCCCTTTT TCATGAATT 58 RIL182_RS07705 intergenic 1658937 1659072 + down AAAGGGCGGTTTCGTCCTTTTTTTGTGCTCAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAGAGCGTATAAAATATGTGAAGAATAGTGCCGATGAAATTATAAAAGAA AGCAGATTTGTTTCTGAATTCATGAAAAGGGCGGTTTCGTCCTTTTTTTGTGCTCAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAAAAAAATCGTAGTTGGTGCAGAGCGTATAAAATATGTGAAGAATAGTGCCGATGAAATTATAAAAGAATGGAACATGATATAAGTCATATTAA TTCTTTTATAATTTCATCGGCACTATTCTTCACATATTTTATACGCTCTGCACCAACTACGATTTTTTTGCACCAACTACGATTTTTTTGCACCAACTACGATTTGAGCACAAAAAAAGGACGAAACCGCCCTTT 135 TTerm_0848 NZ_LR027880.1 1667979 1667992 14 1667997 1668010 14 4 85 0 18 50 50 50 50 0 1667994 AGGGCAGTGAACCA TGGTTTACTGCTCT True TAAAAGACA TTTCACAAC True True - AGAGCAGTAAACCA TTAT TGGTTCACTGCCCT TGTCTTTTA 52 RIL182_RS07765 intergenic 1667764 1668111 + down ATTGTTGATTGCGTTTTAGTAAATAGTAGATAAAAAACGGAAAGATATTCATCGCTGGTAGCGGCATTGAGTTCATAAATTACTACTACTCTAGATAAAAGTAGTATTCCGATAAGTTAAAAGATAAAGCAGATGCAAATAGACACGAATCCCAGCGTATACCAATGAAGGAGTTTATTTCATTTCTTTAATAGTGCAGACATGACTAAAAGACAGGGCAGTGAACCAATAATGGTTTACTGCTCTTTTCACAACAAAAAAAGGTCATTTCACAACAACTGTGGCAGATATAATCTGTTCGTCCGATATAATAAATATATTTATCAGACAAAAAGGAAGTGGCAAAA AAATACTATTGATTTGCAGATTTAGATTGTTGATTGCGTTTTAGTAAATAGTAGATAAAAAACGGAAAGATATTCATCGCTGGTAGCGGCATTGAGTTCATAAATTACTACTACTCTAGATAAAAGTAGTATTCCGATAAGTTAAAAGATAAAGCAGATGCAAATAGACACGAATCCCAGCGTATACCAATGAAGGAGTTTATTTCATTTCTTTAATAGTGCAGACATGACTAAAAGACAGGGCAGTGAACCAATAATGGTTTACTGCTCTTTTCACAACAAAAAAAGGTCATTTCACAACAACTGTGGCAGATATAATCTGTTCGTCCGATATAATAAATATATTTATCAGACAAAAAGGAAGTGGCAAAATGCAAATAGCTATCTGTGATGATGA TTTTGCCACTTCCTTTTTGTCTGATAAATATATTTATTATATCGGACGAACAGATTATATCTGCCACAGTTGTTGTGAAATGACCTTTTTTTGTTGTGAAAAGAGCAGTAAACCATTATTGGTTCACTGCCC 132 TTerm_0849 NZ_LR027880.1 1674862 1674873 12 1674879 1674890 12 5 91 0 19 45 54 45 54 0 1674875 GGCGGCAGATTA TAATTTGCCGCC True AAAAGTTGG TATATACAT True False - GGCGGCAAATTA TTAAC TAATCTGCCGCC CCAACTTTT 38 RIL182_RS07810 intergenic 1674629 1674909 + down TTTATTCAGATGAGAATAGAAGCAATTTCATAAAATCTTACATACACACTTGACAATATTCCGCCGAGCGCGGCGTCGGTGAAGGGGTTCGCACCTGTGGTGTGCCAACAGAGGTATCGCGGATGCACTCATGGAAAAAATGACACCTTTAATAATGAAGAATAGTGTACAGAAATAGCAAATGCTGTGAAATCAATGGTGTAAATATCAGAAATAAGGAAGCTAAAAGTTGGGCGGCAGATTAGTTAATAATTTGCCGCCTATATACATTTCTCTCCTT CGGAAGATTTGATTTTTCAGTTTAGTTTATTCAGATGAGAATAGAAGCAATTTCATAAAATCTTACATACACACTTGACAATATTCCGCCGAGCGCGGCGTCGGTGAAGGGGTTCGCACCTGTGGTGTGCCAACAGAGGTATCGCGGATGCACTCATGGAAAAAATGACACCTTTAATAATGAAGAATAGTGTACAGAAATAGCAAATGCTGTGAAATCAATGGTGTAAATATCAGAAATAAGGAAGCTAAAAGTTGGGCGGCAGATTAGTTAATAATTTGCCGCCTATATACATTTCTCTCCTTTATACCGATACATCAATAGAATTAC AAGGAGAGAAATGTATATAGGCGGCAAATTATTAACTAATCTGCCGC 47 TTerm_0850 NZ_LR027880.1 1674862 1674873 12 1674879 1674890 12 5 91 0 19 45 54 45 54 0 1674875 GGCGGCAGATTA TAATTTGCCGCC True AAAAGTTGG TATATACAT True False - GGCGGCAAATTA TTAAC TAATCTGCCGCC CCAACTTTT 38 RIL182_RS07815 intergenic 1674629 1674909 - down AAGGAGAGAAATGTATATAGGCGGCAAATTATTAACTAATCTGCCGCCCAACTTTTAGCTTCCTTATTTCTGATATTTACACCATTGATTTCACAGCATTTGCTATTTCTGTACACTATTCTTCATTATTAAAGGTGTCATTTTTTCCATGAGTGCATCCGCGATACCTCTGTTGGCACACCACAGGTGCGAACCCCTTCACCGACGCCGCGCTCGGCGGAATATTGTCAAGTGTGTATGTAAGATTTTATGAAATTGCTTCTATTCTCATCTGAATAAA GTAATTCTATTGATGTATCGGTATAAAGGAGAGAAATGTATATAGGCGGCAAATTATTAACTAATCTGCCGCCCAACTTTTAGCTTCCTTATTTCTGATATTTACACCATTGATTTCACAGCATTTGCTATTTCTGTACACTATTCTTCATTATTAAAGGTGTCATTTTTTCCATGAGTGCATCCGCGATACCTCTGTTGGCACACCACAGGTGCGAACCCCTTCACCGACGCCGCGCTCGGCGGAATATTGTCAAGTGTGTATGTAAGATTTTATGAAATTGCTTCTATTCTCATCTGAATAAACTAAACTGAAAAATCAAATCTTCCG AAGGAGAGAAATGTATATAGGCGGCAAATTATTAACTAATCTGCCGC 47 TTerm_0851 NZ_LR027880.1 1688709 1688725 17 1688734 1688750 17 8 82 0 19 73 26 78 21 0 1688729 AAAGAAACTCTGACTTT AAAGTCAGGTTTTTTTT True ACTATTGAA ATGGGATTT True True - AAAAAAAACCTGACTTT ATCATAGC AAAGTCAGAGTTTCTTT TTCAATAGT 54 RIL182_RS07850 intergenic 1688694 1688784 + down ATGATGACTATTGAAAAGAAACTCTGACTTTGCTATGATAAAGTCAGGTTTTTTTTATGGGATTTTTTGGGGGGCGGATAGGTGAGAATA AGACCTTTTTTTTGCAGAAGGTTAAATGATGACTATTGAAAAGAAACTCTGACTTTGCTATGATAAAGTCAGGTTTTTTTTATGGGATTTTTTGGGGGGCGGATAGGTGAGAATATGTCTGAAAAGAGCAAGGTATTAGT TATTCTCACCTATCCGCCCCCCAAAAAATCCCATAAAAAAAACCTGACTTTATCATAGCAAAGTCAGAGTTTCTT 75 TTerm_0852 NZ_LR027880.1 1703559 1703571 13 1703579 1703591 13 7 84 0 16 30 69 27 72 0 1703574 AAGGGGCGGCAGC GCTGTCGCTCCTT True ATAAAAGTA GACTGCCTA True False - AAGGAGCGACAGC CTAAAGT GCTGCCGCCCCTT TACTTTTAT 64 RIL182_RS07950 intergenic 1703509 1703786 - down AAAGGCAGGACAATGAAATTTTTTATGCCGCTACTTTGGTAGAAAATGATTGTGCGCCGGAGATGATATTTTTACAAACGACTTACAGACAACACTTAAAGAATAGCAAACCCAGTCGAGCCAGTCAACGGCAAGATGAACGGCTCTTGCAGAGCCGCCGTTGACAGCCCCGCCCGGTTTTGCAGTTAGGCAGTCAAGGAGCGACAGCCTAAAGTGCTGCCGCCCCTTACTTTTATGATACAGCATCAACTTTGGAAGTATATCCTGATGCTGTATC AAAAAATGGAAACTTCTTATTTTTGAAAGGCAGGACAATGAAATTTTTTATGCCGCTACTTTGGTAGAAAATGATTGTGCGCCGGAGATGATATTTTTACAAACGACTTACAGACAACACTTAAAGAATAGCAAACCCAGTCGAGCCAGTCAACGGCAAGATGAACGGCTCTTGCAGAGCCGCCGTTGACAGCCCCGCCCGGTTTTGCAGTTAGGCAGTCAAGGAGCGACAGCCTAAAGTGCTGCCGCCCCTTACTTTTATGATACAGCATCAACTTTGGAAGTATATCCTGATGCTGTATCAGAGGAACACAGTACACAAGTGAGT AAAGGCAGGACAATGAAATTTTTTATGCCGCTACTTTGGTAGAAAATGATTGTGCGCCGGAGATGATATTTTTACAAACGACTTACAGACAACACTTAAAGAATAGCAAACCCAGTCGAGCCAGTCAACGGCAAGATGAACGGCTCTTGCAGAGCCGCCGTTGACAGCCCCGCCCGGTTTTGCAGTTAGGCAGTCAAGGAGCGACAGCCTAAAGTGCTGCCGCCCCT 227 TTerm_0853 NZ_LR027880.1 1714292 1714298 7 1714304 1714310 7 5 100 0 14 42 57 42 57 0 1714300 TCCTCTG CAGAGGA True GAAAAAAAT CTCGCATTT True False - TCCTCTG GCGAG CAGAGGA ATTTTTTTC 60 RIL182_RS08000 intergenic 1714279 1714344 + down GAAGGAAAAAAATCCTCTGCTCGCCAGAGGACTCGCATTTTCCTTCGGAAAACAAGGAGGATTTA TTCGATGAAGCAGAAAAAATTTTAGGAAGGAAAAAAATCCTCTGCTCGCCAGAGGACTCGCATTTTCCTTCGGAAAACAAGGAGGATTTATGAAATTAACAGGAAAAGAGAAAGT TAAATCCTCCTTGTTTTCCGAAGGAAAATGCGAGTCCTCTGGCGAGCAGAGG 52 TTerm_0854 NZ_LR027880.1 1723102 1723107 6 1723114 1723119 6 6 100 0 12 83 16 83 16 0 1723110 GAAATA TATTTC True GAAAATCAG GTTATAGAA True False - GAAATA CTGTTA TATTTC CTGATTTTC 32 RIL182_RS08045 intergenic 1723087 1723192 + down ACGGCGGAAAATCAGAAATATAACAGTATTTCGTTATAGAAAGTGATAAATAAAGTAAAAGAGATATAAGTTAATTTTAAATTTAAGAAAGGAACACGAAAATTA GCGGAACATGCATTCTATTGTTTAGACGGCGGAAAATCAGAAATATAACAGTATTTCGTTATAGAAAGTGATAAATAAAGTAAAAGAGATATAAGTTAATTTTAAATTTAAGAAAGGAACACGAAAATTATGAACCAGAAAGCATATTACGGAGA TAATTTTCGTGTTCCTTTCTTAAATTTAAAATTAACTTATATCTCTTTTACTTTATTTATCACTTTCTATAACGAAATACTGTTATATTT 90 TTerm_0855 NZ_LR027880.1 1732743 1732753 11 1732759 1732769 11 5 81 0 12 86 13 88 11 0 1732755 TAATAATTTCT AGAAAATAGTA True CAGTAAAAT AATTTGTGC True False - TACTATTTTCT AAAAG AGAAATTATTA ATTTTACTG 32 RIL182_RS08090 intergenic 1732740 1732875 + down AATAATAATTTCTCTTTTAGAAAATAGTAAATTTGTGCGGTATCTGTGCCGATACCGCACAAACCATATATAACGGAAATTTTCTGAAAGAACTGTATTTAGAGATTGAACGGATTTATGAGAGGTTAAAGACTA GTATGCAGCAGCAAACGGACAGTAAAATAATAATTTCTCTTTTAGAAAATAGTAAATTTGTGCGGTATCTGTGCCGATACCGCACAAACCATATATAACGGAAATTTTCTGAAAGAACTGTATTTAGAGATTGAACGGATTTATGAGAGGTTAAAGACTATGGAGAAATCAATAAAAAAATATTT TAGTCTTTAACCTCTCATAAATCCGTTCAATCTCTAAATACAGTTCTTTCAGAAAATTTCCGTTATATATGGTTTGTGCGGTATCGGCACAGATACCGCACAAATTTACTATTTTCTAAAAGAGAAATTATT 132 TTerm_0856 NZ_LR027880.1 1737262 1737267 6 1737275 1737280 6 7 100 0 12 33 66 33 66 0 1737270 CAGACC GGTCTG True AAAAATAAC ATGGCATGA True False - CAGACC TGTATGC GGTCTG GTTATTTTT 56 RIL182_RS08110 intergenic 1737261 1737407 + down CAGACCGCATACAGGTCTGATGGCATGAAAAACAGAAGTTTAGAGGGGGGATTCTGACCGGTCACAGGTTAGAATCCTCCTTTTTATATTATGGGTTCCTTTTTGTCGGAAAATGTTTTAAAATAACAAATAATCGAAAGCTTATA GAAAGTATCCGCAGAGGAAAAATAACAGACCGCATACAGGTCTGATGGCATGAAAAACAGAAGTTTAGAGGGGGGATTCTGACCGGTCACAGGTTAGAATCCTCCTTTTTATATTATGGGTTCCTTTTTGTCGGAAAATGTTTTAAAATAACAAATAATCGAAAGCTTATATGGGGGGATACATGCTATATTTTAT TATAAGCTTTCGATTATTTGTTATTTTAAAACATTTTCCGACAAAAAGGAACCCATAATATAAAAAGGAGGATTCTAACCTGTGACCGGTCAGAATCCCCCCTCTAAACTTCTGTTTTTCATGCCATCAGACCTGTATGCGGTCT 145 TTerm_0857 NZ_LR027880.1 1749787 1749800 14 1749805 1749818 14 4 92 0 23 89 10 92 7 0 1749802 AAATAATTTCAAAT ATCTGAAATTATTT True TTACCGTAA CAAAAATAG True False - AAATAATTTCAGAT TTTT ATTTGAAATTATTT TTACGGTAA 62 RIL182_RS08165 intergenic 1749792 1749935 + down TTTCAAATAAAAATCTGAAATTATTTCAAAAATAGGTTGACGAACCGGGAAAATATGTTATAATGCTATATAGTGCAATAAATATTACCCAAACAGTTGAATATGCACAATACGCAACTGGAGGGAGGTTAGGTGTGAGATAA TAAAGTTCAGATTACCGTAAAATAATTTCAAATAAAAATCTGAAATTATTTCAAAAATAGGTTGACGAACCGGGAAAATATGTTATAATGCTATATAGTGCAATAAATATTACCCAAACAGTTGAATATGCACAATACGCAACTGGAGGGAGGTTAGGTGTGAGATAATGTCTAGTGTAATTGTAAAAGAAAA TTATCTCACACCTAACCTCCCTCCAGTTGCGTATTGTGCATATTCAACTGTTTGGGTAATATTTATTGCACTATATAGCATTATAACATATTTTCCCGGTTCGTCAACCTATTTTTGAAATAATTTCAGATTTTTATTTGAAATTATT 148 TTerm_0858 NZ_LR027880.1 1755908 1755928 21 1755933 1755953 21 4 85 0 27 61 38 61 38 0 1755930 AAAAGGACAGAAGTTGGAATC GAATCCAGTTTCTGTCCTTTT True TGCATAGGA AAAATTTTT True True - AAAAGGACAGAAACTGGATTC TTCG GATTCCAACTTCTGTCCTTTT TCCTATGCA 78 RIL182_RS08195 intergenic 1755818 1756006 + down ACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTTAAAATTTTTAGTAATCAGATATTATTTTTTGTGTTCTTGTTTTTCTTTGAGCC AGATGAGCTGGTATATTTCTCGTAAACCGGATATGTTCTGCATGTGTAAGCTGGGAAGAATAATCGCTGCTGGTCACACTTGGAGATGTGAACAGTAACAAATAGATGCATAGGAAAAGGACAGAAGTTGGAATCCGAAGAATCCAGTTTCTGTCCTTTTAAAATTTTTAGTAATCAGATATTATTTTTTGTGTTCTTGTTTTTCTTTGAGCCTATTCTTCCTTGATTCCATGTTCAC GGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTT 98 TTerm_0859 NZ_LR027880.1 1755908 1755928 21 1755933 1755953 21 4 85 0 27 61 38 61 38 0 1755930 AAAAGGACAGAAGTTGGAATC GAATCCAGTTTCTGTCCTTTT True TGCATAGGA AAAATTTTT True True - AAAAGGACAGAAACTGGATTC TTCG GATTCCAACTTCTGTCCTTTT TCCTATGCA 78 RIL182_RS08200 intergenic 1755818 1756006 - down GGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTTTCCTATGCATCTATTTGTTACTGTTCACATCTCCAAGTGTGACCAGCAGCGATTATTCTTCCCAGCTTACACATGCAGAACATATCCGGT GTGAACATGGAATCAAGGAAGAATAGGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTTTCCTATGCATCTATTTGTTACTGTTCACATCTCCAAGTGTGACCAGCAGCGATTATTCTTCCCAGCTTACACATGCAGAACATATCCGGTTTACGAGAAATATACCAGCTCATCT GGCTCAAAGAAAAACAAGAACACAAAAAATAATATCTGATTACTAAAAATTTTAAAAGGACAGAAACTGGATTCTTCGGATTCCAACTTCTGTCCTTT 98 TTerm_0860 NZ_LR027880.1 1763005 1763017 13 1763022 1763034 13 4 84 0 16 92 7 100 0 0 1763019 TTAAAAACTTTTT AAAAATTTCTTAA True ATTTTTTCT CACATCTAA True False - TTAAGAAATTTTT ATAA AAAAAGTTTTTAA AGAAAAAAT 32 RIL182_RS08225 intergenic 1762943 1763170 + down TAGACCAGTGATGGTAAAAATGCCGGAGTCAGTGGAAACTGCTGATGTCCGGCATTTTTTCTTAAAAACTTTTTTTATAAAAATTTCTTAACACATCTAAAATATTCCTTAAATCTTATCCAAAACCTACTTTTTTTCAAAAATATTGGTTATACTTGTAAGCAAAGTTATGATGAATTGTAAATGAGTCAGAGTGACAGTGATGAATACTAAGAGGTATAGCTATA CGATGAATATCTGAGCAATAAATAATAGACCAGTGATGGTAAAAATGCCGGAGTCAGTGGAAACTGCTGATGTCCGGCATTTTTTCTTAAAAACTTTTTTTATAAAAATTTCTTAACACATCTAAAATATTCCTTAAATCTTATCCAAAACCTACTTTTTTTCAAAAATATTGGTTATACTTGTAAGCAAAGTTATGATGAATTGTAAATGAGTCAGAGTGACAGTGATGAATACTAAGAGGTATAGCTATATGGAGGAAAATGTGAACCAGACAGA TATAGCTATACCTCTTAGTATTCATCACTGTCACTCTGACTCATTTACAATTCATCATAACTTTGCTTACAAGTATAACCAATATTTTTGAAAAAAAGTAGGTTTTGGATAAGATTTAAGGAATATTTTAGATGTGTTAAGAAATTTTTATAAAAAAAGTTTTTA 165 TTerm_0861 NZ_LR027880.1 1772846 1772851 6 1772860 1772865 6 8 100 0 12 33 66 33 66 0 1772855 CAGGTG CACCTG True CAGAAAAAC ACTGTTTGC True False - CAGGTG CTATTTGC CACCTG GTTTTTCTG 56 RIL182_RS08265 intergenic 1772751 1773049 + down ATATTTTAAAAAGATTACGGAAACTGTTGATAAAACTATATAAAAAAATAATGAAATGAACAGTAAATAATAAAATCCTCTGTAAACAGAAAAACAGGTGGCAAATAGCACCTGACTGTTTGCAGAGGATTTTATTATTACTATTTACCAATAAAAATTTATTGTAAAACAATAAAAATATATTGCAAAAGCAAGATATATGTGTATAATAAAGGAAAACAATAAAACCAGAAAGAAAAATCTGGAATCAAAAACAAACTCAAAGAAAAGTGAATCAGATCAGGAGGAGAATCATTTA ATATTTACAATCGAACAGACAATAAATATTTTAAAAAGATTACGGAAACTGTTGATAAAACTATATAAAAAAATAATGAAATGAACAGTAAATAATAAAATCCTCTGTAAACAGAAAAACAGGTGGCAAATAGCACCTGACTGTTTGCAGAGGATTTTATTATTACTATTTACCAATAAAAATTTATTGTAAAACAATAAAAATATATTGCAAAAGCAAGATATATGTGTATAATAAAGGAAAACAATAAAACCAGAAAGAAAAATCTGGAATCAAAAACAAACTCAAAGAAAAGTGAATCAGATCAGGAGGAGAATCATTTATGCAGCAAAAAGAAATTTCACGGTG TAAATGATTCTCCTCCTGATCTGATTCACTTTTCTTTGAGTTTGTTTTTGATTCCAGATTTTTCTTTCTGGTTTTATTGTTTTCCTTTATTATACACATATATCTTGCTTTTGCAATATATTTTTATTGTTTTACAATAAATTTTTATTGGTAAATAGTAATAATAAAATCCTCTGCAAACAGTCAGGTGCTATTTGCCACCT 203 TTerm_0862 NZ_LR027880.1 1772929 1772937 9 1772942 1772950 9 4 88 0 13 72 27 75 25 0 1772939 ATATATTGC GCAAGATAT True CAATAAAAA ATGTGTATA True False - ATATCTTGC TTTT GCAATATAT TTTTTATTG 50 RIL182_RS08265 intergenic 1772751 1773049 + down ATATTTTAAAAAGATTACGGAAACTGTTGATAAAACTATATAAAAAAATAATGAAATGAACAGTAAATAATAAAATCCTCTGTAAACAGAAAAACAGGTGGCAAATAGCACCTGACTGTTTGCAGAGGATTTTATTATTACTATTTACCAATAAAAATTTATTGTAAAACAATAAAAATATATTGCAAAAGCAAGATATATGTGTATAATAAAGGAAAACAATAAAACCAGAAAGAAAAATCTGGAATCAAAAACAAACTCAAAGAAAAGTGAATCAGATCAGGAGGAGAATCATTTA ATATTTACAATCGAACAGACAATAAATATTTTAAAAAGATTACGGAAACTGTTGATAAAACTATATAAAAAAATAATGAAATGAACAGTAAATAATAAAATCCTCTGTAAACAGAAAAACAGGTGGCAAATAGCACCTGACTGTTTGCAGAGGATTTTATTATTACTATTTACCAATAAAAATTTATTGTAAAACAATAAAAATATATTGCAAAAGCAAGATATATGTGTATAATAAAGGAAAACAATAAAACCAGAAAGAAAAATCTGGAATCAAAAACAAACTCAAAGAAAAGTGAATCAGATCAGGAGGAGAATCATTTATGCAGCAAAAAGAAATTTCACGGTG TAAATGATTCTCCTCCTGATCTGATTCACTTTTCTTTGAGTTTGTTTTTGATTCCAGATTTTTCTTTCTGGTTTTATTGTTTTCCTTTATTATACACATATATCTTGCTTTTGCAATATA 120 TTerm_0863 NZ_LR027880.1 1785037 1785050 14 1785059 1785072 14 8 78 0 13 67 32 72 27 0 1785054 TATGGTGTTATGTA TACATGACTGCATA True TAAAAACAT AAATCGTAT True False - TATGCAGTCATGTA CCATTTCC TACATAACACCATA ATGTTTTTA 42 RIL182_RS08325 intergenic 1785051 1785360 + down GAAATGGTACATGACTGCATAAAATCGTATCACAGGAAGAGATACAGGATAAGAGCAGCTTTCACGGATGTGGAGGCTGCTTTTATTTATGATAATAGAATGCTCGCAGAGTGTGCATTCTATTATTCATGACAATAGAATGCTCGCAGGGTGTGCATTCTATTGTATATGTTCACACTTTTATCACAGATTCATCCTCCTTTAAACACAATTACACGTTACTCTTATAAAGTAATAATTTGGTTACTGGTCACACGATAAGTGCGGATAGTGGCATATATTGAGAATGAAATAAGGAGGAGAGAAACG ATTAAAAACATATGGTGTTATGTAGGAAATGGTACATGACTGCATAAAATCGTATCACAGGAAGAGATACAGGATAAGAGCAGCTTTCACGGATGTGGAGGCTGCTTTTATTTATGATAATAGAATGCTCGCAGAGTGTGCATTCTATTATTCATGACAATAGAATGCTCGCAGGGTGTGCATTCTATTGTATATGTTCACACTTTTATCACAGATTCATCCTCCTTTAAACACAATTACACGTTACTCTTATAAAGTAATAATTTGGTTACTGGTCACACGATAAGTGCGGATAGTGGCATATATTGAGAATGAAATAAGGAGGAGAGAAACGTGATTGAGATCAATCATCTGGTAAA CGTTTCTCTCCTCCTTATTTCATTCTCAATATATGCCACTATCCGCACTTATCGTGTGACCAGTAACCAAATTATTACTTTATAAGAGTAACGTGTAATTGTGTTTAAAGGAGGATGAATCTGTGATAAAAGTGTGAACATATACAATAGAATGCACACCCTGCGAGCATTCTATTGTCATGAATAATAGAATGCACACTCTGCGAGCATTCTATTATCATAAATAAAAGCAGCCTCCACATCCGTGAAAGCTGCTCTTATCCTGTATCTCTTCCTGTGATACGATTTTATGCAGTCATGTACCATTTCCTACATAACACCAT 323 TTerm_0864 NZ_LR027880.1 1789103 1789116 14 1789125 1789138 14 8 92 0 23 60 39 61 38 0 1789120 AAAATACCGGATTG CAGTCCGGTATTTT True CAGAGATGA AAGTTCATA True True - AAAATACCGGACTG CACATATA CAATCCGGTATTTT TCATCTCTG 78 RIL182_RS08340 intergenic 1789068 1789279 + down GAGAGTGAAATGACAAATCTGAATCACAGAGATGAAAATACCGGATTGTATATGTGCAGTCCGGTATTTTAAGTTCATAAATTTTTAATTTGACACTTTTGGAAAAAAGAGGTAACATGAATGTGAGAAAGTTCATTAACGAACTAATTCGAACCGCAAAGCAGGAAATAAAAAGTTATTTACCGGAAGAAAAAAGAATGTGGAGCAGGGA AACAGAGGAAACGGAAACGAAGTAAGAGAGTGAAATGACAAATCTGAATCACAGAGATGAAAATACCGGATTGTATATGTGCAGTCCGGTATTTTAAGTTCATAAATTTTTAATTTGACACTTTTGGAAAAAAGAGGTAACATGAATGTGAGAAAGTTCATTAACGAACTAATTCGAACCGCAAAGCAGGAAATAAAAAGTTATTTACCGGAAGAAAAAAGAATGTGGAGCAGGGATGATGTACAGTGAGTATGAAATATT TCCCTGCTCCACATTCTTTTTTCTTCCGGTAAATAACTTTTTATTTCCTGCTTTGCGGTTCGAATTAGTTCGTTAATGAACTTTCTCACATTCATGTTACCTCTTTTTTCCAAAAGTGTCAAATTAAAAATTTATGAACTTAAAATACCGGACTGCACATATACAATCCGGTATTT 176 TTerm_0865 NZ_LR027880.1 1791809 1791817 9 1791827 1791835 9 9 88 0 13 72 27 75 25 0 1791821 GCAGATATT AATATATGC True CAAAAACAG ATGTTAAAT True False - GCATATATT ATTATAGCA AATATCTGC CTGTTTTTG 26 RIL182_RS21205 intergenic 1791634 1791882 + down AAAATCAGCAGAAGAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGCATCGTGAATTAATGAATTGCAAAAACAGCAGATATTTGCTATAATAATATATGCATGTTAAATGCAACCACAATTCACATAGAAAACGAGGAAACAGACTA CCGGGAAGGAACGATAGGCGGATAGAAAATCAGCAGAAGAAATATATAGGGAAAAAGCAGGGGGAATTTTGCGCGTATTGACCAGGAACGAAGGGTAACCGCAGATGGAATGCTGATAACTGGATTATTTATAAAAATGCATAGATAAAAAAGTTAAAAGCGAAATCCCTGCATCGTGAATTAATGAATTGCAAAAACAGCAGATATTTGCTATAATAATATATGCATGTTAAATGCAACCACAATTCACATAGAAAACGAGGAAACAGACTATGGCATTATTAGAACAGTGGCAGAA TAGTCTGTTTCCTCGTTTTCTATGTGAATTGTGGTTGCATTTAACATGCATATATTATTATAGCAAATATCTG 73 TTerm_0866 NZ_LR027880.1 1792393 1792410 18 1792417 1792434 18 6 88 0 26 61 38 62 37 0 1792413 AAAATCCCGGTGTTTTGA TCAGAACACAGGGATTTT True AGTAAAACA TATGTATCT True True - AAAATCCCTGTGTTCTGA TATCAT TCAAAACACCGGGATTTT TGTTTTACT 68 RIL182_RS08360 intergenic 1792385 1792463 + down GTAAAACAAAATCCCGGTGTTTTGAATGATATCAGAACACAGGGATTTTTATGTATCTGAAAGGAGAAATTATCATTA TAAATACTGCTGCATGAATAAATAAGTAAAACAAAATCCCGGTGTTTTGAATGATATCAGAACACAGGGATTTTTATGTATCTGAAAGGAGAAATTATCATTATGAAAAAAATAAAAGAATTTTTTGC TAATGATAATTTCTCCTTTCAGATACATAAAAATCCCTGTGTTCTGATATCATTCAAAACACCGGGATTT 70 TTerm_0867 NZ_LR027880.1 1793205 1793218 14 1793226 1793239 14 7 92 0 23 60 39 61 38 0 1793221 AAAACCGGAGATTT AAGTCTCCGGTTTT True AGGACGGTA TCTTATAGC True True - AAAACCGGAGACTT CTATACA AAATCTCCGGTTTT TACCGTCCT 62 RIL182_RS08370 intergenic 1793172 1793403 + down GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAA ATGCGCAAGTTTCTGCTGCGGCTAAGAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAATGAGAAAAAAATCTCATATTTCGCT TTCTAAAAGCCTCCCATTCTTATGCATTCCTGACACTCAGAAATGTATTCTATGACTTATTTTCTATTCGCATTATAAGTCTCATCTAACCAAAATACAAGTTAAGATTACCTGAATTTTTTCTGTGCATTCTATGTCAGATTTCTAAAGATTCCGCTATAAGAAAAACCGGAGACTTCTATACAAAATCTCCGGTTT 198 TTerm_0868 NZ_LR027880.1 1793284 1793294 11 1793302 1793312 11 7 81 0 12 77 22 77 22 0 1793297 AAAATTCAGGT ACTTGTATTTT True GCACAGAAA GGTTAGATG True True - AAAATACAAGT TAAGATT ACCTGAATTTT TTTCTGTGC 40 RIL182_RS08370 intergenic 1793172 1793403 + down GAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAA ATGCGCAAGTTTCTGCTGCGGCTAAGAAGTTTTTGCGCCAGCGGTAACAAGGACGGTAAAACCGGAGATTTTGTATAGAAGTCTCCGGTTTTTCTTATAGCGGAATCTTTAGAAATCTGACATAGAATGCACAGAAAAAATTCAGGTAATCTTAACTTGTATTTTGGTTAGATGAGACTTATAATGCGAATAGAAAATAAGTCATAGAATACATTTCTGAGTGTCAGGAATGCATAAGAATGGGAGGCTTTTAGAATGAGAAAAAAATCTCATATTTCGCT TTCTAAAAGCCTCCCATTCTTATGCATTCCTGACACTCAGAAATGTATTCTATGACTTATTTTCTATTCGCATTATAAGTCTCATCTAACCAAAATACAAGTTAAGATTACCTGAATTT 119 TTerm_0869 NZ_LR027880.1 1794446 1794454 9 1794461 1794469 9 6 100 0 18 77 22 77 22 0 1794457 AAAATCAAG CTTGATTTT True GCCGTTGGA TTCTTAAGA True True - AAAATCAAG AATTTC CTTGATTTT TCCAACGGC 52 RIL182_RS08380 intergenic 1794339 1794489 + down CAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGA AAAACAGCAGGTACAGATGAGCTGACAGACAGGCGAACAGGAAAAATATTATTTTAAGAACGATAGGACAAAGGTACTACCGTTCTTTTTTTGTGCAACAAATTAGTAACATTACCGCAAAAAGCCGTTGGAAAATCAAGGAAATTCTTGATTTTTTCTTAAGAGTGGTTTAAGATGTATATAAATGTGGAGGAAAGTGG TCTTAAACCACTCTTAAGAAAAAATCAAGAATTTCCTTGATTT 43 TTerm_0870 NZ_LR027880.1 1804836 1804842 7 1804849 1804855 7 6 100 0 14 85 14 85 14 0 1804845 AAAAAAG CTTTTTT True TTTGTAAAA GAAAAATCA True False - AAAAAAG ATTACA CTTTTTT TTTTACAAA 36 RIL182_RS08425 intergenic 1804834 1804951 + down AAAAAAAGTGTAATCTTTTTTGAAAAATCAGTTGATTAATTGTAAGAAAAATTATATTATAGATTATATGAGTTTTTTAGCTGTAATTTTTTAAGCTAAATGAAGGAGGAACTACCT TGTGTTTGACCGTGCAGATTTGTAAAAAAAAAGTGTAATCTTTTTTGAAAAATCAGTTGATTAATTGTAAGAAAAATTATATTATAGATTATATGAGTTTTTTAGCTGTAATTTTTTAAGCTAAATGAAGGAGGAACTACCTTGCTGGAGATTAAGACAACAGAAGC AGGTAGTTCCTCCTTCATTTAGCTTAAAAAATTACAGCTAAAAAACTCATATAATCTATAATATAATTTTTCTTACAATTAATCAACTGATTTTTCAAAAAAGATTACACTTTTT 115 TTerm_0871 NZ_LR027880.1 1808018 1808030 13 1808037 1808049 13 6 76 0 11 88 11 100 0 0 1808033 ATATATAAAATAT ATATTGTGCATAT True GTTAAAAAA AGCTGAAAA True False - ATATGCACAATAT TTTTTC ATATTTTATATAT TTTTTTAAC 30 RIL182_RS08440 intergenic 1807972 1808101 + down AGTCTCTCTGCTTTTTGTCTGGTAAAACGACAAAATAGTTAAAAAATATATAAAATATGAAAAAATATTGTGCATATAGCTGAAAAATAGTATAATGAAAGAAAAGCAGACAGAATGGGGGACTTCATA AAAAGAAATCGTGCGTCTTGAGTAAAGTCTCTCTGCTTTTTGTCTGGTAAAACGACAAAATAGTTAAAAAATATATAAAATATGAAAAAATATTGTGCATATAGCTGAAAAATAGTATAATGAAAGAAAAGCAGACAGAATGGGGGACTTCATATGGTATTGGAATTTTTAGGCGCAGC TATGAAGTCCCCCATTCTGTCTGCTTTTCTTTCATTATACTATTTTTCAGCTATATGCACAATATTTTTTCATATTTTATATA 83 TTerm_0872 NZ_LR027880.1 1831356 1831372 17 1831381 1831397 17 8 76 0 14 79 20 84 15 0 1831376 GAAAATATTTAAGAAAA TTCTCTTAAGAGTTTTC True ATAATTTCG CCGTAAGAT True True - GAAAACTCTTAAGAGAA CGGACAGC TTTTCTTAAATATTTTC CGAAATTAT 44 RIL182_RS08540 intergenic 1831324 1831439 + down AATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGA CGGAACCATTTTACTGGAATCGTAAAATGGTTCCGATTTTGTTTAGAAATAATTTCGAAAATATTTAAGAAAAGCTGTCCGTTCTCTTAAGAGTTTTCCCGTAAGATTATCTGTGAAAGGAAAGGGAGGGAAGCTTAGGATGGAGAACAGAGAAAAATATCTGAG TCCTAAGCTTCCCTCCCTTTCCTTTCACAGATAATCTTACGGGAAAACTCTTAAGAGAACGGACAGCTTTTCTTAAATATTTT 83 TTerm_0873 NZ_LR027880.1 1842038 1842056 19 1842063 1842081 19 6 94 0 33 65 34 66 33 0 1842059 AAAAAAAGAACCGTAAGCC GGCTTATGGTTCTTTTTTT True TAAGATTGA TCGAAAATA True True - AAAAAAAGAACCATAAGCC AAATCC GGCTTACGGTTCTTTTTTT TCAATCTTA 90 RIL182_RS08595 intergenic 1842032 1842213 + down GATTGAAAAAAAGAACCGTAAGCCGGATTTGGCTTATGGTTCTTTTTTTTCGAAAATACATTGTTGATATTGTATAAAATAGACAAAAAAATGAAAAAACGTATTGAATTTTAAGTGATAAGTACTATAATAAGGGTAAGCAATAAGAAACTAGCATTTATACATATGGGAGGTGTTATTA GATTAATACATCTACAAGATACTAAGATTGAAAAAAAGAACCGTAAGCCGGATTTGGCTTATGGTTCTTTTTTTTCGAAAATACATTGTTGATATTGTATAAAATAGACAAAAAAATGAAAAAACGTATTGAATTTTAAGTGATAAGTACTATAATAAGGGTAAGCAATAAGAAACTAGCATTTATACATATGGGAGGTGTTATTATGATTAGTTTTTTTATTTGCCTGGC TAATAACACCTCCCATATGTATAAATGCTAGTTTCTTATTGCTTACCCTTATTATAGTACTTATCACTTAAAATTCAATACGTTTTTTCATTTTTTTGTCTATTTTATACAATATCAACAATGTATTTTCGAAAAAAAAGAACCATAAGCCAAATCCGGCTTACGGTTCTTTTTT 175 TTerm_0874 NZ_LR027880.1 1844729 1844754 26 1844759 1844784 26 4 81 7 15 55 44 59 40 0 1844756 AAAATACCGGCGGCGAAACGTTAAGA TCTTACGTTTGGCAGGTCGGTATTTT True AATAAAAGA TATGCATAA True True - AAAATACCGACCTGCCAAACGTAAGA CTTT TCTTAACGTTTCGCCGCCGGTATTTT TCTTTTATT 46 RIL182_RS08605 intergenic 1844718 1844842 + down AAAATAAAAGAAAATACCGGCGGCGAAACGTTAAGAAAAGTCTTACGTTTGGCAGGTCGGTATTTTTATGCATAAAAATAAGCCTGTCTCATAGAATGAATTAAAAGAAAAGGGAGGAGGCATA GTTCCTTGTAATGGATTACAGATAAAAAATAAAAGAAAATACCGGCGGCGAAACGTTAAGAAAAGTCTTACGTTTGGCAGGTCGGTATTTTTATGCATAAAAATAAGCCTGTCTCATAGAATGAATTAAAAGAAAAGGGAGGAGGCATATGGAAAACCTAAAAGTTTTGTTTCC TATGCCTCCTCCCTTTTCTTTTAATTCATTCTATGAGACAGGCTTATTTTTATGCATAAAAATACCGACCTGCCAAACGTAAGACTTTTCTTAACGTTTCGCCGCCGGTATTT 113 TTerm_0875 NZ_LR027880.1 1853173 1853180 8 1853186 1853193 8 5 87 0 11 81 18 85 14 0 1853182 AATAGGAT ATACTATT True ATTTTTAAA GCATTTTTC True True - AATAGTAT TTCAT ATCCTATT TTTAAAAAT 30 RIL182_RS08660 intergenic 1853130 1853347 + down CAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACA CAAAAAAGTAAAGATAACAAAATAACAGTTTCAATGGGGCAGCTTTTTAAAGCTGTCTCATTTTTAAAATAGGATATGAAATACTATTGCATTTTTCTATATTTTTGAATATACTAAAAACAACAGAGTTGCCCGAGTTTTTTGGACATTGGGGACCAGGCTGAGACATGTGCTCAGCTTTTTTCTTTAGAGAACTGGATTGGAAAGCAGGATTTTCACATACAGGAATGGAGACTTTTACATGAAGAGAGTATTTTTGATCGTACT TGTAAAAGTCTCCATTCCTGTATGTGAAAATCCTGCTTTCCAATCCAGTTCTCTAAAGAAAAAAGCTGAGCACATGTCTCAGCCTGGTCCCCAATGTCCAAAAAACTCGGGCAACTCTGTTGTTTTTAGTATATTCAAAAATATAGAAAAATGCAATAGTATTTCATATCCTAT 174 TTerm_0876 NZ_LR027880.1 1862626 1862642 17 1862647 1862663 17 4 100 0 34 64 35 64 35 0 1862644 AAAAATAAGCTGCACAC GTGTGCAGCTTATTTTT True GATGGCATA TTCTGGATG True True - AAAAATAAGCTGCACAC CTCT GTGTGCAGCTTATTTTT TATGCCATC 100 RIL182_RS08710 intergenic 1862627 1862656 + down AAATAAGCTGCACACAGAGGTGTGCAGCT AAATGGTATCCGTATGATGGCATAAAAATAAGCTGCACACAGAGGTGTGCAGCTTATTTTTTTCTGGATGTACGATAAT AGCTGCACACCTCTGTGTGCAGCTTATTTT 30 TTerm_0877 NZ_LR027880.1 1862626 1862642 17 1862647 1862663 17 4 100 0 34 64 35 64 35 0 1862644 AAAAATAAGCTGCACAC GTGTGCAGCTTATTTTT True GATGGCATA TTCTGGATG True True - AAAAATAAGCTGCACAC CTCT GTGTGCAGCTTATTTTT TATGCCATC 100 RIL182_RS21965 intergenic 1862627 1862656 - down AGCTGCACACCTCTGTGTGCAGCTTATTT ATTATCGTACATCCAGAAAAAAATAAGCTGCACACCTCTGTGTGCAGCTTATTTTTATGCCATCATACGGATACCATTT AGCTGCACACCTCTGTGTGCAGCTTATTTT 30 TTerm_0878 NZ_LR027880.1 1865321 1865333 13 1865343 1865355 13 9 100 0 26 69 30 69 30 0 1865337 AAAAAAGGAACTC GAGTTCCTTTTTT True TGAATAATA CATTATGAG True True - AAAAAAGGAACTC CATTTCTGT GAGTTCCTTTTTT TATTATTCA 76 RIL182_RS08725 intergenic 1865267 1865398 + down TAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTTCATTATGAGATTTCAAGAAGCTGCCGGTACAGGTAAAAAATCT TCTGAAAGCACATCCGAGAGGATAGTAGTAGAAACAATAGAATGCATGTTCTGCAAACACTCTATTGTCATGAATAATAAAAAAGGAACTCACAGAAATGGAGTTCCTTTTTTCATTATGAGATTTCAAGAAGCTGCCGGTACAGGTAAAAAATCTTAACGGCACATATCTGCAATCGTAT AGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTT 77 TTerm_0879 NZ_LR027880.1 1865321 1865333 13 1865343 1865355 13 9 100 0 26 69 30 69 30 0 1865337 AAAAAAGGAACTC GAGTTCCTTTTTT True TGAATAATA CATTATGAG True True - AAAAAAGGAACTC CATTTCTGT GAGTTCCTTTTTT TATTATTCA 76 RIL182_RS08730 intergenic 1865267 1865398 - down AGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTTTATTATTCATGACAATAGAGTGTTTGCAGAACATGCATTCTATTGTTTCTACTA ATACGATTGCAGATATGTGCCGTTAAGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTTTATTATTCATGACAATAGAGTGTTTGCAGAACATGCATTCTATTGTTTCTACTACTATCCTCTCGGATGTGCTTTCAGA AGATTTTTTACCTGTACCGGCAGCTTCTTGAAATCTCATAATGAAAAAAGGAACTCCATTTCTGTGAGTTCCTTTTT 77 TTerm_0880 NZ_LR027880.1 1873347 1873352 6 1873361 1873366 6 8 100 0 12 83 16 83 16 0 1873356 TTGTAT ATACAA True AAAAAAAAT AGGAGGACA True False - TTGTAT TCCTGTTG ATACAA ATTTTTTTT 32 RIL182_RS08755 intergenic 1873296 1873380 + down AAAAACAGGATAGTTGTGGTATAGTTTATTAGCAGATGATGTAAAAAAAATTGTATCAACAGGAATACAAAGGAGGACACATCA AAAAAAAGAACACGGGATCGGTTAAAAAAACAGGATAGTTGTGGTATAGTTTATTAGCAGATGATGTAAAAAAAATTGTATCAACAGGAATACAAAGGAGGACACATCATGTCCATGCGCATATATACCATGAC TGATGTGTCCTCCTTTGTATTCCTGTTGATACA 33 TTerm_0881 NZ_LR027880.1 1874603 1874612 10 1874621 1874630 10 8 90 0 15 75 25 77 22 0 1874616 GCGTAAAAAA TTTTTTATGC True TAAAACGTG TGCAGATCC True False - GCATAAAAAA AATGTTAC TTTTTTACGC CACGTTTTA 30 RIL182_RS08760 intergenic 1874492 1874659 + down ATTTTAAGAAATGCCGGAAAGCAGGAAAATACACGCATGAGGAAGAATGCCGTAACCTGCACCGGCATTTTTTGTTGACAATTATTTTATGGTCTGCTATGATAAAACGTGCGTAAAAAAGTAACATTTTTTTTATGCTGCAGATCCCTTATAATAGTAAGAGCAGG TCGCATGTTAAAATATCTTCATTAAATTTTAAGAAATGCCGGAAAGCAGGAAAATACACGCATGAGGAAGAATGCCGTAACCTGCACCGGCATTTTTTGTTGACAATTATTTTATGGTCTGCTATGATAAAACGTGCGTAAAAAAGTAACATTTTTTTTATGCTGCAGATCCCTTATAATAGTAAGAGCAGGCAACCGTAGTCTAATGGATAGAACA CCTGCTCTTACTATTATAAGGGATCTGCAGCATAAAAAAAATGTTACTTTTTTACG 56 TTerm_0882 NZ_LR027880.1 1882028 1882044 17 1882051 1882067 17 6 82 0 19 61 38 64 35 0 1882047 TAAGAAAAGAGGGTGTC GACATCCTTTTTCCTTA True TGCTATTCT TGCGTAAAA True True - TAAGGAAAAAGGATGTC GCTTAA GACACCCTCTTTTCTTA AGAATAGCA 62 RIL182_RS08800 intergenic 1882019 1882112 + down TGCTATTCTAAGAAAAGAGGGTGTCTTAAGCGACATCCTTTTTCCTTATGCGTAAAAGAATACAAGAAGAAAGGATGACAGAAGAAAAGAATA TGTGGACATGGGCAACAATAAATAATGCTATTCTAAGAAAAGAGGGTGTCTTAAGCGACATCCTTTTTCCTTATGCGTAAAAGAATACAAGAAGAAAGGATGACAGAAGAAAAGAATATGACCAGAAGAGAGATAAGAGAGCA TATTCTTTTCTTCTGTCATCCTTTCTTCTTGTATTCTTTTACGCATAAGGAAAAAGGATGTCGCTTAAGACACCCTCTTTTCTT 84 TTerm_0883 NZ_LR027880.1 1890888 1890901 14 1890909 1890922 14 7 85 0 18 71 28 75 25 0 1890904 AAAAAGGGGATATC GATATCTTCTTTTT True CATATAATA TTGCGAAAG True True - AAAAAGAAGATATC CTGTTTC GATATCCCCTTTTT TATTATATG 52 RIL182_RS08845 intergenic 1890801 1890955 + down AAATTCCAAAAAAAGGCCGGTGTGTCAGGAAGTGGCAGGGCAGTTTGGATAAATAACAGCGTGAAAAAGAAAAAAGCACATATAATAAAAAGGGGATATCGAAACAGGATATCTTCTTTTTTTGCGAAAGATGGGGAAAACAGGAGAGAGAGAA ACTTGCCGCAAAAAAGAAAAAATAAAAATTCCAAAAAAAGGCCGGTGTGTCAGGAAGTGGCAGGGCAGTTTGGATAAATAACAGCGTGAAAAAGAAAAAAGCACATATAATAAAAAGGGGATATCGAAACAGGATATCTTCTTTTTTTGCGAAAGATGGGGAAAACAGGAGAGAGAGAATGAAAAAGATAAGTGCTTATTACAG TTCTCTCTCTCCTGTTTTCCCCATCTTTCGCAAAAAAAGAAGATATCCTGTTTCGATATCCCCTTTT 67 TTerm_0884 NZ_LR027880.1 1893765 1893775 11 1893783 1893793 11 7 90 0 17 86 13 90 10 0 1893778 TATCATCAATT AATTTATGATA True AAAATAAGT ATAGAAAGT True False - TATCATAAATT ATTTGTA AATTGATGATA ACTTATTTT 34 RIL182_RS08855 intergenic 1893697 1893847 + down TCCATAATTTATGTAAATTTTTGCGCTTGACGACTACATTCGACAAAATAATTTGAGTGAAAATAAGTATCATCAATTTACAAATAATTTATGATAATAGAAAGTTCGCGAGGCGCACTTTCTATTGTTTTGTCACAGGAGGGCTTGAAA TGGATTTCGTATTATTGTAGAATAATCCATAATTTATGTAAATTTTTGCGCTTGACGACTACATTCGACAAAATAATTTGAGTGAAAATAAGTATCATCAATTTACAAATAATTTATGATAATAGAAAGTTCGCGAGGCGCACTTTCTATTGTTTTGTCACAGGAGGGCTTGAAATGGAAAAATTAAGTGTAGCAATTGC TTTCAAGCCCTCCTGTGACAAAACAATAGAAAGTGCGCCTCGCGAACTTTCTATTATCATAAATTATTTGTAAATTGATGAT 82 TTerm_0885 NZ_LR027880.1 1894688 1894698 11 1894705 1894715 11 6 90 0 17 86 13 90 10 0 1894701 CAAAAGTTTAT ATAAATTTTTG True TAGATTTTC GGGCTGGAG True True - CAAAAATTTAT TCTTCT ATAAACTTTTG GAAAATCTA 34 RIL182_RS08860 intergenic 1894641 1894735 + down TACTTTTCAGAAAAGTAAAAAAGAGTTATAATATTCTTTAGATTTTCAAAAGTTTATAGAAGAATAAATTTTTGGGGCTGGAGGGTTTATGACA TCGTCTGGAACATAAAATGTATTAATACTTTTCAGAAAAGTAAAAAAGAGTTATAATATTCTTTAGATTTTCAAAAGTTTATAGAAGAATAAATTTTTGGGGCTGGAGGGTTTATGACATGAAAAAAATATTATTTGCGGCTTC TGTCATAAACCCTCCAGCCCCAAAAATTTATTCTTCTATAAACTTTT 47 TTerm_0886 NZ_LR027880.1 1909518 1909523 6 1909529 1909534 6 5 100 0 12 100 0 100 0 0 1909525 TTTTAT ATAAAA True TCATAAAAT AGACTGTTC True False - TTTTAT CTTTT ATAAAA ATTTTATGA 24 RIL182_RS08945 intergenic 1909515 1909719 + down AATTTTATAAAAGATAAAAAGACTGTTCAAAGAAGAAAGTATATTTCATTTGGACAGTCTTTTTTATAGTACTATTGACATATAATAGTGAAAATGCTAATATCATACTAATTTGATATGAATTAGATGATAATAGAAAGAAAACAGGATGCAGCAGCCAATAACAGAAATACAAAAGATGGTTAAAGGAGCGGTATTCCGGAA CGATATCAGACATGGAAATTCATAAAATTTTATAAAAGATAAAAAGACTGTTCAAAGAAGAAAGTATATTTCATTTGGACAGTCTTTTTTATAGTACTATTGACATATAATAGTGAAAATGCTAATATCATACTAATTTGATATGAATTAGATGATAATAGAAAGAAAACAGGATGCAGCAGCCAATAACAGAAATACAAAAGATGGTTAAAGGAGCGGTATTCCGGAATGGAGTATGTCATGAAGTACAATTT TTCCGGAATACCGCTCCTTTAACCATCTTTTGTATTTCTGTTATTGGCTGCTGCATCCTGTTTTCTTTCTATTATCATCTAATTCATATCAAATTAGTATGATATTAGCATTTTCACTATTATATGTCAATAGTACTATAAAAAAGACTGTCCAAATGAAATATACTTTCTTCTTTGAACAGTCTTTTTATCTTTTATAAA 201 TTerm_0887 NZ_LR027880.1 1909612 1909628 17 1909636 1909651 16 7 88 5 17 81 18 80 20 0 1909631 CTAATATCATACTAATT AATTAGATGATAATAG True TGAAAATGC AAAGAAAAC True False - CTATTATCATCTAATT CATATCA AATTAGTATGATATTAG GCATTTTCA 42 RIL182_RS08945 intergenic 1909515 1909719 + down AATTTTATAAAAGATAAAAAGACTGTTCAAAGAAGAAAGTATATTTCATTTGGACAGTCTTTTTTATAGTACTATTGACATATAATAGTGAAAATGCTAATATCATACTAATTTGATATGAATTAGATGATAATAGAAAGAAAACAGGATGCAGCAGCCAATAACAGAAATACAAAAGATGGTTAAAGGAGCGGTATTCCGGAA CGATATCAGACATGGAAATTCATAAAATTTTATAAAAGATAAAAAGACTGTTCAAAGAAGAAAGTATATTTCATTTGGACAGTCTTTTTTATAGTACTATTGACATATAATAGTGAAAATGCTAATATCATACTAATTTGATATGAATTAGATGATAATAGAAAGAAAACAGGATGCAGCAGCCAATAACAGAAATACAAAAGATGGTTAAAGGAGCGGTATTCCGGAATGGAGTATGTCATGAAGTACAATTT TTCCGGAATACCGCTCCTTTAACCATCTTTTGTATTTCTGTTATTGGCTGCTGCATCCTGTTTTCTTTCTATTATCATCTAATTCATATCAAATTAGTATGATATTA 107 TTerm_0888 NZ_LR027880.1 1913922 1913940 19 1913950 1913968 19 9 94 0 33 71 28 72 27 0 1913944 TCAGAAAATTGGGGTATTT AAATACCCCAATTTTTTGA True CTGTTGAGT TGTCTCATT True True - TCAAAAAATTGGGGTATTT TTGTTGAAT AAATACCCCAATTTTCTGA ACTCAACAG 74 RIL182_RS08960 intergenic 1913920 1914157 + down GTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAA TTTAAAACATATGCAATTCTGTTGAGTCAGAAAATTGGGGTATTTATTCAACAAAAATACCCCAATTTTTTGATGTCTCATTTTGAATGACCAAAAATCAAGGTATATTTTATCAATTATTTACGGTATTTTAATTTTCTTCCCTTTTATATAATAAATACAACAAAAGCAGTTCGGAAATATTTTTTTTAAAACAATACTTAAACGTTTTCGAAAAGCTCCGGATGCTGGCGAAAACCAAAAAAGAAGGGAAAGGGAGAAATGAAAGAAACGGGCATTTCAAAAAA TTTCTCCCTTTCCCTTCTTTTTTGGTTTTCGCCAGCATCCGGAGCTTTTCGAAAACGTTTAAGTATTGTTTTAAAAAAAATATTTCCGAACTGCTTTTGTTGTATTTATTATATAAAAGGGAAGAAAATTAAAATACCGTAAATAATTGATAAAATATACCTTGATTTTTGGTCATTCAAAATGAGACATCAAAAAATTGGGGTATTTTTGTTGAATAAATACCCCAATTTTCTG 235 TTerm_0889 NZ_LR027880.1 1916600 1916605 6 1916613 1916618 6 7 100 0 12 66 33 66 33 0 1916608 GGTTAA TTAACC True CCGTAAAAG GCGAGGCGC True False - GGTTAA CACCTCT TTAACC CTTTTACGG 40 RIL182_RS08970 intergenic 1916605 1916665 + down AGAGGTGTTAACCGCGAGGCGCGGAATCAAAATAACACAAAAACAAGGAGGAAAATTACA CATGTTAGGTGCCGTAAAAGGTTAAAGAGGTGTTAACCGCGAGGCGCGGAATCAAAATAACACAAAAACAAGGAGGAAAATTACATGAAAGCAAAGAAAATCGTATCACT TGTAATTTTCCTCCTTGTTTTTGTGTTATTTTGATTCCGCGCCTCGCGGTTAACACCTCTTTAAC 65 TTerm_0890 NZ_LR027880.1 1939190 1939203 14 1939212 1939225 14 8 85 0 18 42 57 41 58 0 1939207 AAAGCGCCATCGGA TCCGGTGGCGTTTT True AATAACAAA ATATTGCCT True True - AAAACGCCACCGGA CGTCCTGA TCCGATGGCGCTTT TTTGTTATT 68 RIL182_RS09070 intergenic 1939170 1939294 + down TAAAAATAGGAAATAACAAAAAGCGCCATCGGATCAGGACGTCCGGTGGCGTTTTATATTGCCTAAAAAGTTAAAAAATGATATAATTTCTCCTATGTGAAATACAAACGGGAGGGCGGAAACA ACAGGGATATATCACAAAGAAATAATAAAAATAGGAAATAACAAAAAGCGCCATCGGATCAGGACGTCCGGTGGCGTTTTATATTGCCTAAAAAGTTAAAAAATGATATAATTTCTCCTATGTGAAATACAAACGGGAGGGCGGAAACATGGTTGTAAAAACGGCTGTTTTAAA TGTTTCCGCCCTCCCGTTTGTATTTCACATAGGAGAAATTATATCATTTTTTAACTTTTTAGGCAATATAAAACGCCACCGGACGTCCTGATCCGATGGCGCTT 104 TTerm_0891 NZ_LR027880.1 1970794 1970799 6 1970804 1970809 6 4 100 0 12 100 0 100 0 0 1970801 AAAAAT ATTTTT True TAAAATAAA GCAGGGAGG True False - AAAAAT TATT ATTTTT TTTATTTTA 24 RIL182_RS09180 intergenic 1970744 1970827 + down CTATTGATAATTTATGAGTGGTATCATACCGTCATATTTTATAAAATAAAAAAATAATAATTTTTGCAGGGAGGTATTTTTTA GCGGTGGTTGAATGAGACAATGTAACTATTGATAATTTATGAGTGGTATCATACCGTCATATTTTATAAAATAAAAAAATAATAATTTTTGCAGGGAGGTATTTTTTATGAAGAAAAAAGCATTGGGATTCAT TAAAAAATACCTCCCTGCAAAAATTATTATTTT 33 TTerm_0892 NZ_LR027880.1 1994404 1994421 18 1994426 1994443 18 4 100 0 36 77 22 77 22 0 1994423 AAAGAAACGCATATATTA TAATATATGCGTTTCTTT True GAAACGCAA ATTGGAGTC True False - AAAGAAACGCATATATTA CTGA TAATATATGCGTTTCTTT TTGCGTTTC 72 RIL182_RS09300 intergenic 1994378 1994457 + down TTTTTTAAAACAGTATAGAAACGCAAAAGAAACGCATATATTATCAGTAATATATGCGTTTCTTTATTGGAGTCTGCCA CTTAAAGGATTCCGCAAACAAATAATTTTTTAAAACAGTATAGAAACGCAAAAGAAACGCATATATTATCAGTAATATATGCGTTTCTTTATTGGAGTCTGCCATGAAACGGATGCTCGGATTTGCACT TGGCAGACTCCAATAAAGAAACGCATATATTACTGATAATATATGCGTTTCTT 53 TTerm_0893 NZ_LR027880.1 2003481 2003490 10 2003496 2003505 10 5 90 0 15 70 30 77 22 0 2003492 AATCTAAGTC GAGTTAGATT True AATAAGAAA ACAACGGAG True False - AATCTAACTC AGGCA GACTTAGATT TTTCTTATT 46 RIL182_RS09335 intergenic 2002988 2003571 + down AAACAGATGAGATTTGTTGTGAATTGATGCTGCACCCAGTCAGGAGGTGGCTGAGCCTTGGGACGTGCGCCGGAACCGGCAGGTTTTGTTGGGTTCCGTTGTACGGAAATAAGAGGTTCTAAGTGCCCTTGATCTGGGTTGTGGCAGAGTGACGCGTGCATCCCCGGACGAGCCTTCCATGGCTCGACGGGGATTTTTGCTGCCATCCGTGGCAGCAAAACGCTGTTTTGTGACAAGGGCACTAAGAACCTCTAATTTCCTCCCAAAGTCATCACAAAATCTGCCGGTTCCGGTGCACTGTCGGCGTGCCTTAGTGCAAACACCCTCCAAGTTTCTGATGGATTTTAGATGATATTGATTGTGGCTTCACTGCTAAAGCAGGAAGCTGTTTTTTGCTGTGTAGGATTCGGGTGTCAAAAGGTGGCTTCAAGTTTTTGATTGGCAAATTGCACAAAGTCGGGTCTGTTTTGTTCCGATGTCCGAAAATAAGAAAATCTAAGTCTGCCTGAGTTAGATTACAACGGAGTGACGTGTACGTCTTAAACGCCCCGTCCATGTGGCGTTAAGACTTTTGCCGCCTCAC GTGAGGCGGCAAAAGTCTTAACGCCACATGGACGGGGCGTTTAAGACGTACACGTCACTCCGTTGTAATCTAACTCAGGCAGACTTAGAT 90 TTerm_0894 NZ_LR027880.1 2003481 2003490 10 2003496 2003505 10 5 90 0 15 70 30 77 22 0 2003492 AATCTAAGTC GAGTTAGATT True AATAAGAAA ACAACGGAG True False - AATCTAACTC AGGCA GACTTAGATT TTTCTTATT 46 RIL182_RS09345 intergenic 2002988 2003571 - down GTGAGGCGGCAAAAGTCTTAACGCCACATGGACGGGGCGTTTAAGACGTACACGTCACTCCGTTGTAATCTAACTCAGGCAGACTTAGATTTTCTTATTTTCGGACATCGGAACAAAACAGACCCGACTTTGTGCAATTTGCCAATCAAAAACTTGAAGCCACCTTTTGACACCCGAATCCTACACAGCAAAAAACAGCTTCCTGCTTTAGCAGTGAAGCCACAATCAATATCATCTAAAATCCATCAGAAACTTGGAGGGTGTTTGCACTAAGGCACGCCGACAGTGCACCGGAACCGGCAGATTTTGTGATGACTTTGGGAGGAAATTAGAGGTTCTTAGTGCCCTTGTCACAAAACAGCGTTTTGCTGCCACGGATGGCAGCAAAAATCCCCGTCGAGCCATGGAAGGCTCGTCCGGGGATGCACGCGTCACTCTGCCACAACCCAGATCAAGGGCACTTAGAACCTCTTATTTCCGTACAACGGAACCCAACAAAACCTGCCGGTTCCGGCGCACGTCCCAAGGCTCAGCCACCTCCTGACTGGGTGCAGCATCAATTCACAACAAATCTCATCTGTTT GTGAGGCGGCAAAAGTCTTAACGCCACATGGACGGGGCGTTTAAGACGTACACGTCACTCCGTTGTAATCTAACTCAGGCAGACTTAGAT 90 TTerm_0895 NZ_LR027880.1 2019811 2019829 19 2019837 2019855 19 7 94 0 33 65 34 66 33 0 2019832 AAAAATCCAAAAGACTGGA TCCGGTCTTTTGGATTTTT True GAAAAAGGA TGTTTCAGT True True - AAAAATCCAAAAGACCGGA TCTGCAT TCCAGTCTTTTGGATTTTT TCCTTTTTC 98 RIL182_RS09400 intergenic 2019802 2019931 + down GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAAT TACATGGAAGGTTAAGGTAAAATAGGAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAATTAAGCTCTTTCAACTTTGCCGGATT ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTT 120 TTerm_0896 NZ_LR027880.1 2019811 2019829 19 2019837 2019855 19 7 94 0 33 65 34 66 33 0 2019832 AAAAATCCAAAAGACTGGA TCCGGTCTTTTGGATTTTT True GAAAAAGGA TGTTTCAGT True True - AAAAATCCAAAAGACCGGA TCTGCAT TCCAGTCTTTTGGATTTTT TCCTTTTTC 98 RIL182_RS09405 intergenic 2019802 2019931 - down ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTC AATCCGGCAAAGTTGAAAGAGCTTAATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTCCTATTTTACCTTAACCTTCCATGTA ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTT 120 TTerm_0897 NZ_LR027880.1 2019881 2019896 16 2019903 2019918 16 6 87 0 22 68 31 71 28 0 2019899 AAAAAACTGCCATATC GATACGACAGTTTTTT True CAGACACAA CAGTGTTCA True True - AAAAAACTGTCGTATC CGATTT GATATGGCAGTTTTTT TTGTGTCTG 68 RIL182_RS09400 intergenic 2019802 2019931 + down GAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAAT TACATGGAAGGTTAAGGTAAAATAGGAAAAAGGAAAAATCCAAAAGACTGGAATGCAGATCCGGTCTTTTGGATTTTTTGTTTCAGTGGAAATTCCAGACACAAAAAAACTGCCATATCAAATCGGATACGACAGTTTTTTCAGTGTTCAAAATTAAGCTCTTTCAACTTTGCCGGATT ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTT 50 TTerm_0898 NZ_LR027880.1 2019881 2019896 16 2019903 2019918 16 6 87 0 22 68 31 71 28 0 2019899 AAAAAACTGCCATATC GATACGACAGTTTTTT True CAGACACAA CAGTGTTCA True True - AAAAAACTGTCGTATC CGATTT GATATGGCAGTTTTTT TTGTGTCTG 68 RIL182_RS09405 intergenic 2019802 2019931 - down ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTC AATCCGGCAAAGTTGAAAGAGCTTAATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTTTTGTGTCTGGAATTTCCACTGAAACAAAAAATCCAAAAGACCGGATCTGCATTCCAGTCTTTTGGATTTTTCCTTTTTCCTATTTTACCTTAACCTTCCATGTA ATTTTGAACACTGAAAAAACTGTCGTATCCGATTTGATATGGCAGTTTTT 50 TTerm_0899 NZ_LR027880.1 2024638 2024646 9 2024653 2024661 9 6 88 0 13 100 0 100 0 0 2024649 AAATTATTT AAATTATTT True TACAGCAAA GCCTGACAT True False - AAATAATTT TGCCAC AAATAATTT TTTGCTGTA 26 RIL182_RS09420 intergenic 2024465 2024656 + down AAATTGATTTTATGATAGATTTCATTTACATACTGCCTGTAAATTGGAAATAATAATACGGTTACAAAAACGGGAGCTTTCCTATGGAAAGCTCCCGTTTTTGTGTGCCCAAAGGCATAGATCCTTGCGGATCATAGATCTTAGTGGCTCGAAGAACCGTCATTTACAGCAAAAATTATTTGTGGCAAAAT TCAGAAGAGCAGGCTCAATCTTTAAAAATTGATTTTATGATAGATTTCATTTACATACTGCCTGTAAATTGGAAATAATAATACGGTTACAAAAACGGGAGCTTTCCTATGGAAAGCTCCCGTTTTTGTGTGCCCAAAGGCATAGATCCTTGCGGATCATAGATCTTAGTGGCTCGAAGAACCGTCATTTACAGCAAAAATTATTTGTGGCAAAATTATTTGCCTGACATCTGTCTCTCCT ATTTTGCCACAAATAATT 18 TTerm_0900 NZ_LR027880.1 2024638 2024646 9 2024653 2024661 9 6 88 0 13 100 0 100 0 0 2024649 AAATTATTT AAATTATTT True TACAGCAAA GCCTGACAT True False - AAATAATTT TGCCAC AAATAATTT TTTGCTGTA 26 RIL182_RS09425 intergenic 2024465 2024656 - down ATTTTGCCACAAATAATTTTTGCTGTAAATGACGGTTCTTCGAGCCACTAAGATCTATGATCCGCAAGGATCTATGCCTTTGGGCACACAAAAACGGGAGCTTTCCATAGGAAAGCTCCCGTTTTTGTAACCGTATTATTATTTCCAATTTACAGGCAGTATGTAAATGAAATCTATCATAAAATCAATTT AGGAGAGACAGATGTCAGGCAAATAATTTTGCCACAAATAATTTTTGCTGTAAATGACGGTTCTTCGAGCCACTAAGATCTATGATCCGCAAGGATCTATGCCTTTGGGCACACAAAAACGGGAGCTTTCCATAGGAAAGCTCCCGTTTTTGTAACCGTATTATTATTTCCAATTTACAGGCAGTATGTAAATGAAATCTATCATAAAATCAATTTTTAAAGATTGAGCCTGCTCTTCTGA ATTTTGCCACAAATAATT 18 TTerm_0901 NZ_LR027880.1 2027331 2027351 21 2027361 2027381 21 9 95 0 37 59 40 60 40 0 2027355 GAAAAAAACGCAGTCGTGAAT ATTCACGGCTGCGTTTTTTTC True TTGTAAGCG ATGATAATG True True - GAAAAAAACGCAGCCGTGAAT TTTTATACG ATTCACGACTGCGTTTTTTTC CGCTTACAA 90 RIL182_RS09435 intergenic 2027310 2027471 + down ATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTCATGATAATGGTTTGGTTCGCGAAGCGTGTATTCTATTGCTTACGATGATAGTGTTTTGCACGCAGGTCATGGCGTATTGGATTATTGATT ACTGCAGAAAAGGAAAGAAGCGTAAATTACTCAATCATTGTAAGCGAAAAAAACGCAGTCGTGAATCGTATAAAAATTCACGGCTGCGTTTTTTTCATGATAATGGTTTGGTTCGCGAAGCGTGTATTCTATTGCTTACGATGATAGTGTTTTGCACGCAGGTCATGGCGTATTGGATTATTGATTTATTCCACCAGTGTCAGACCGGAGA AATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTT 140 TTerm_0902 NZ_LR027880.1 2027331 2027351 21 2027361 2027381 21 9 95 0 37 59 40 60 40 0 2027355 GAAAAAAACGCAGTCGTGAAT ATTCACGGCTGCGTTTTTTTC True TTGTAAGCG ATGATAATG True True - GAAAAAAACGCAGCCGTGAAT TTTTATACG ATTCACGACTGCGTTTTTTTC CGCTTACAA 90 RIL182_RS09440 intergenic 2027310 2027471 - down AATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTTCGCTTACAATGATTGAGTAAT TCTCCGGTCTGACACTGGTGGAATAAATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTTCGCTTACAATGATTGAGTAATTTACGCTTCTTTCCTTTTCTGCAGT AATCAATAATCCAATACGCCATGACCTGCGTGCAAAACACTATCATCGTAAGCAATAGAATACACGCTTCGCGAACCAAACCATTATCATGAAAAAAACGCAGCCGTGAATTTTTATACGATTCACGACTGCGTTTTTTT 140 TTerm_0903 NZ_LR027880.1 2047508 2047513 6 2047519 2047524 6 5 100 0 12 66 33 66 33 0 2047515 TCTGTT AACAGA True CAAAATAGT TAAAAATCT True False - TCTGTT TCATG AACAGA ACTATTTTG 40 RIL182_RS09510 intergenic 2047507 2047605 + down TCTGTTCATGAAACAGATAAAAATCTGTAACATAAATATAAGAATCTAAGAGCGGGAGACCGCCATATGCGCAATGCGCAAAGAAAGGGGAATTATCA TGAACTAAAAACATTTTCAAAATAGTCTGTTCATGAAACAGATAAAAATCTGTAACATAAATATAAGAATCTAAGAGCGGGAGACCGCCATATGCGCAATGCGCAAAGAAAGGGGAATTATCATGATACATCCATCTTATGTAGAATT TGATAATTCCCCTTTCTTTGCGCATTGCGCATATGGCGGTCTCCCGCTCTTAGATTCTTATATTTATGTTACAGATTTTTATCTGTTTCATGAACAG 97 TTerm_0904 NZ_LR027880.1 2067833 2067847 15 2067853 2067868 16 5 87 6 15 64 35 64 35 0 2067849 CACTGGTATACATAA TTATGGTAAACCAGTG True AAAACGGTC CCGGGACAC True False - CACTGGTTTACCATAA AAATA TTATGTATACCAGTG GACCGTTTT 46 RIL182_RS09620 intergenic 2067748 2067945 + down AAATACAAGGTATGAATTTGTCCATAGATTCATAAAATGATATCAAAAATCAGAATAAAAAAACGATGTTTACTTAAAAACGGTCACTGGTATACATAATATTTTTATGGTAAACCAGTGCCGGGACACAGAACTGCTGTATGAAATCAGTCATATAATTTTATGCAGATGGACTGGCACAGAAATGGAGTGTTCTA TACAAAAAAGCAGAGACAGAAATAAAAATACAAGGTATGAATTTGTCCATAGATTCATAAAATGATATCAAAAATCAGAATAAAAAAACGATGTTTACTTAAAAACGGTCACTGGTATACATAATATTTTTATGGTAAACCAGTGCCGGGACACAGAACTGCTGTATGAAATCAGTCATATAATTTTATGCAGATGGACTGGCACAGAAATGGAGTGTTCTATGGACAGACAGACAGTCGAACGGCG TAGAACACTCCATTTCTGTGCCAGTCCATCTGCATAAAATTATATGACTGATTTCATACAGCAGTTCTGTGTCCCGGCACTGGTTTACCATAAAAATATTATGTATACCAGT 112 TTerm_0905 NZ_LR027880.1 2077354 2077361 8 2077370 2077377 8 8 87 0 11 75 25 71 28 0 2077365 AAACATGA TCAAGTTT True ACAGGAAAA AAACATGCC True False - AAACTTGA AACATCAA TCATGTTT TTTTCCTGT 38 RIL182_RS09680 intergenic 2077365 2077453 + down TGTTTCAAGTTTAAACATGCCTTTCTGGTGTGGTGTATGAAGCCATTGCCGGGAAAATAAACAAAAATAATAGGAGAGTGTAGATTTA TCAATACAGGAAAAAACATGATTGATGTTTCAAGTTTAAACATGCCTTTCTGGTGTGGTGTATGAAGCCATTGCCGGGAAAATAAACAAAAATAATAGGAGAGTGTAGATTTATGACTTCAGCAGAATATTGTAAAAT TAAATCTACACTCTCCTATTATTTTTGTTTATTTTCCCGGCAATGGCTTCATACACCACACCAGAAAGGCATGTTTAAACTTGAAACATCAATCATGTT 99 TTerm_0906 NZ_LR027880.1 2080809 2080826 18 2080831 2080848 18 4 88 0 26 61 38 56 43 0 2080828 AACCGATGGTTTTGACTA TAGTCTATACCATCGGTT True CATAAGAAA CTTTTGTTA True True - AACCGATGGTATAGACTA ATCG TAGTCAAAACCATCGGTT TTTCTTATG 68 RIL182_RS09700 intergenic 2080805 2080968 + down GAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCACTTGACAAACAAATGTTCGCGTATTATGATACAGATATGCAAACAGTTGTTCGCAACAAATGTTTGCATGTGATGGAGGGTGTTTA CGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACCACTTGACAAACAAATGTTCGCGTATTATGATACAGATATGCAAACAGTTGTTCGCAACAAATGTTTGCATGTGATGGAGGGTGTTTATGAGAAGCAGAAGAAAAAGCAGGAA TAAACACCCTCCATCACATGCAAACATTTGTTGCGAACAACTGTTTGCATATCTGTATCATAATACGCGAACATTTGTTTGTCAAGTGGTTACTGTTCAGAGGTAAACTTGTAACAAAAGAACCGATGGTATAGACTAATCGTAGTCAAAACCATCGGT 159 TTerm_0907 NZ_LR027880.1 2086811 2086819 9 2086827 2086835 9 7 88 0 13 83 16 87 12 0 2086822 TGTAAATAA TTATTTGCA True AAGTAAAAT GGCTGTCAA True False - TGCAAATAA ATCTATA TTATTTACA ATTTTACTT 26 RIL182_RS09735 intergenic 2086819 2087155 + down TATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTT AGTAAAAAAAGTAAAATGTAAATAATATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTTTATTTCTGTGCATCCATAATTTCAC AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATATTATTTAC 344 TTerm_0908 NZ_LR027880.1 2086811 2086819 9 2086827 2086835 9 7 88 0 13 83 16 87 12 0 2086822 TGTAAATAA TTATTTGCA True AAGTAAAAT GGCTGTCAA True False - TGCAAATAA ATCTATA TTATTTACA ATTTTACTT 26 RIL182_RS09740 intergenic 2086819 2087155 - down AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATA GTGAAATTATGGATGCACAGAAATAAAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATATTATTTACATTTTACTTTTTTTACT AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATATTATTTAC 344 TTerm_0909 NZ_LR027880.1 2087094 2087112 19 2087120 2087138 19 7 84 0 23 65 34 68 31 0 2087115 AAAAAAATCCCCATTAAGG CCTTAACAGGGACTTTTTT True ATTTTTATA CCGGGATAT True True - AAAAAAGTCCCTGTTAAGG TGTATAG CCTTAATGGGGATTTTTTT TATAAAAAT 62 RIL182_RS09735 intergenic 2086819 2087155 + down TATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTT AGTAAAAAAAGTAAAATGTAAATAATATAGATTTATTTGCAGGCTGTCAATCAGAAAAATCCCGTGTTAACCAGATATTTATCTTAACACGGGATTTTCGTATGGATGCATTGATGATAAAGTTTGTATAAATTTATATGTAGCAGAGTGTATTTGAGTTGTTTGATTGTCTTTTCTTCTATTCGCAAAACACAAGTTTAACGAATAGTTGTATTCGGAAGCAAATAGTCTGTAGCTTATTAACTCAATATACGCTGTGTCGGCAACAAAACTAATCAATTTGCAATTATCATTTTTATAAAAAAATCCCCATTAAGGCTATACACCTTAACAGGGACTTTTTTCCGGGATATTTCTATTTTATTTCTGTGCATCCATAATTTCAC AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTT 61 TTerm_0910 NZ_LR027880.1 2087094 2087112 19 2087120 2087138 19 7 84 0 23 65 34 68 31 0 2087115 AAAAAAATCCCCATTAAGG CCTTAACAGGGACTTTTTT True ATTTTTATA CCGGGATAT True True - AAAAAAGTCCCTGTTAAGG TGTATAG CCTTAATGGGGATTTTTTT TATAAAAAT 62 RIL182_RS09740 intergenic 2086819 2087155 - down AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATA GTGAAATTATGGATGCACAGAAATAAAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTTTATAAAAATGATAATTGCAAATTGATTAGTTTTGTTGCCGACACAGCGTATATTGAGTTAATAAGCTACAGACTATTTGCTTCCGAATACAACTATTCGTTAAACTTGTGTTTTGCGAATAGAAGAAAAGACAATCAAACAACTCAAATACACTCTGCTACATATAAATTTATACAAACTTTATCATCAATGCATCCATACGAAAATCCCGTGTTAAGATAAATATCTGGTTAACACGGGATTTTTCTGATTGACAGCCTGCAAATAAATCTATATTATTTACATTTTACTTTTTTTACT AAATAGAAATATCCCGGAAAAAAGTCCCTGTTAAGGTGTATAGCCTTAATGGGGATTTTTT 61 TTerm_0911 NZ_LR027880.1 2094964 2094969 6 2094978 2094983 6 8 100 0 12 100 0 100 0 0 2094973 ATAAAA TTTTAT True GAAAATGAA AAATTAATT True False - ATAAAA CGAACCGT TTTTAT TTCATTTTC 24 RIL182_RS09790 intergenic 2094912 2095031 - down ATTGAAAATATTATTGTTTTTTTTGTGTTAATATACTATAATTAATTTATAAAACGAACCGTTTTTATTCATTTTCACGAATATGGACGTTGCATCGAAGGATCAGGAGGGAAATGACC AAATGTTATCCGGTTTTGCAAATTAATTGAAAATATTATTGTTTTTTTTGTGTTAATATACTATAATTAATTTATAAAACGAACCGTTTTTATTCATTTTCACGAATATGGACGTTGCATCGAAGGATCAGGAGGGAAATGACCATGATAGAGATTATTTCAGGCGAAA ATTGAAAATATTATTGTTTTTTTTGTGTTAATATACTATAATTAATTTATAAAACGAACCGTTTTTA 67 TTerm_0912 NZ_LR027880.1 2096035 2096050 16 2096058 2096073 16 7 93 0 27 53 46 53 46 0 2096053 ATACGCAGGATACACC GGTATATCCTGCGTAT True TTCATAAAA ATATTTTAT True True - ATACGCAGGATATACC TTTATCT GGTGTATCCTGCGTAT TTTTATGAA 70 RIL182_RS09795 intergenic 2096014 2096132 - down ACAGAAACGAATAATAGAATACACACTTTGTGAACATTCTATTATTAAGAATAAAATATATACGCAGGATATACCTTTATCTGGTGTATCCTGCGTATTTTATGAAAGGAATTTTAAC TAGAGTGGCGTGAAATGTACAAATAACAGAAACGAATAATAGAATACACACTTTGTGAACATTCTATTATTAAGAATAAAATATATACGCAGGATATACCTTTATCTGGTGTATCCTGCGTATTTTATGAAAGGAATTTTAACATGAAACGATTGCTATCTGTTCTGT ACAGAAACGAATAATAGAATACACACTTTGTGAACATTCTATTATTAAGAATAAAATATATACGCAGGATATACCTTTATCTGGTGTATCCTGCGTA 97 TTerm_0913 NZ_LR027880.1 2123676 2123683 8 2123690 2123697 8 6 87 0 11 87 12 85 14 0 2123686 AAAAAAGA TCTTTATT True ATGAAGGAA CGTAAATAT True False - AATAAAGA ATAAGA TCTTTTTT TTCCTTCAT 30 RIL182_RS09920 intergenic 2123657 2123693 - down AAGAATAAGATCTTTTTTTCCTTCATACAATCATAT TCGTAAGAGAATATATTTACGAATAAAGAATAAGATCTTTTTTTCCTTCATACAATCATATATGAAGAAAAATCAGAAAGAAAAAA AAGAATAAGATCTTTTT 17 TTerm_0914 NZ_LR027880.1 2134421 2134433 13 2134442 2134454 13 8 76 0 11 69 30 70 30 0 2134437 AAACACTAAGGTT AACCTCTGTTTTT True TCATGATAA CCCCTGTTT True True - AAAAACAGAGGTT AAAGCGTA AACCTTAGTGTTT TTATCATGA 46 RIL182_RS09960 intergenic 2134322 2134440 + down CAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTT CGTTGATGAGTTTGAGAGTGTATAACAGATTTTAAAAAAGATTTATTTTATTTCGATCGAATACATCTAAAAAACGGGGATTACATACTATAGTAACATGTAATCCCTGTTTTTTTCATGATAAAACACTAAGGTTTACGCTTTAACCTCTGTTTTTCCCCTGTTTCC AAGCGTAAACCTTAGTGTT 19 TTerm_0915 NZ_LR027880.1 2134421 2134433 13 2134442 2134454 13 8 76 0 11 69 30 70 30 0 2134437 AAACACTAAGGTT AACCTCTGTTTTT True TCATGATAA CCCCTGTTT True True - AAAAACAGAGGTT AAAGCGTA AACCTTAGTGTTT TTATCATGA 46 RIL182_RS09965 intergenic 2134322 2134440 - down AAGCGTAAACCTTAGTGTTTTATCATGAAAAAAACAGGGATTACATGTTACTATAGTATGTAATCCCCGTTTTTTAGATGTATTCGATCGAAATAAAATAAATCTTTTTTAAAATCTG GGAAACAGGGGAAAAACAGAGGTTAAAGCGTAAACCTTAGTGTTTTATCATGAAAAAAACAGGGATTACATGTTACTATAGTATGTAATCCCCGTTTTTTAGATGTATTCGATCGAAATAAAATAAATCTTTTTTAAAATCTGTTATACACTCTCAAACTCATCAACG AAGCGTAAACCTTAGTGTT 19 TTerm_0916 NZ_LR027880.1 2137888 2137908 21 2137913 2137933 21 4 95 0 37 59 40 60 40 0 2137910 GCATGAAAAAAGTCAGTCACA TGTGGCTGACTTTTTTCATGC True CATTAAAAG AATGTTTTC True True - GCATGAAAAAAGTCAGCCACA AACA TGTGACTGACTTTTTTCATGC CTTTTAATG 106 RIL182_RS09980 intergenic 2137861 2137955 + down ATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGCAATGTTTTCTTAGCTGTTTCCT CGAATTTATTCCTGAAGAAGAATAAATATATGCCTTTGGTGTACATTAAAAGCATGAAAAAAGTCAGTCACATGTTTGTGGCTGACTTTTTTCATGCAATGTTTTCTTAGCTGTTTCCTTACGGATGATATCCCAAATTTACAC AGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATG 67 TTerm_0917 NZ_LR027880.1 2137888 2137908 21 2137913 2137933 21 4 95 0 37 59 40 60 40 0 2137910 GCATGAAAAAAGTCAGTCACA TGTGGCTGACTTTTTTCATGC True CATTAAAAG AATGTTTTC True True - GCATGAAAAAAGTCAGCCACA AACA TGTGACTGACTTTTTTCATGC CTTTTAATG 106 RIL182_RS09985 intergenic 2137861 2137955 - down AGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATGCTTTTAATGTACACCAAAGGCATATAT GTGTAAATTTGGGATATCATCCGTAAGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATGCTTTTAATGTACACCAAAGGCATATATTTATTCTTCTTCAGGAATAAATTCG AGGAAACAGCTAAGAAAACATTGCATGAAAAAAGTCAGCCACAAACATGTGACTGACTTTTTTCATG 67 TTerm_0918 NZ_LR027880.1 2147032 2147037 6 2147044 2147049 6 6 100 0 12 100 0 100 0 0 2147040 TTTTAT ATAAAA True AAAAAAACT AACGACACA True False - TTTTAT ATGAAA ATAAAA AGTTTTTTT 24 RIL182_RS10015 intergenic 2146909 2147103 - down AATAAGATTCAAGGTACATAAGATAAACGGCATGGATGAAAAGTCTGTGTCGTTTTTTATATGAAAATAAAAGTTTTTTTACATTGTATTAAATTTTTTTGCTTTGCAGTAAAAAAATATGGTATTCTTTTCGGAAATGTTATATGATAATAGTAATTAAGATTTGAAGAATAAACACAGGAATGGAGATTGCT AAGTATATCACAACTGGGATGAATAAATAAGATTCAAGGTACATAAGATAAACGGCATGGATGAAAAGTCTGTGTCGTTTTTTATATGAAAATAAAAGTTTTTTTACATTGTATTAAATTTTTTTGCTTTGCAGTAAAAAAATATGGTATTCTTTTCGGAAATGTTATATGATAATAGTAATTAAGATTTGAAGAATAAACACAGGAATGGAGATTGCTATGAAGAAAATACTTTTTGCAGCAT AATAAGATTCAAGGTACATAAGATAAACGGCATGGATGAAAAGTCTGTGTCGTTTTTTATATGAAAATAAA 71 TTerm_0919 NZ_LR027880.1 2151244 2151251 8 2151258 2151265 8 6 100 0 16 25 75 25 75 0 2151254 GCCGCACA TGTGCGGC True CAAAAAACG AGCTATTTG True False - GCCGCACA GATTTA TGTGCGGC CGTTTTTTG 64 RIL182_RS10040 intergenic 2151104 2151298 - down AAAAGGTGCTGTAAATGTAGAGAGCAAATAGCTGCCGCACAGATTTATGTGCGGCGTTTTTTGCCTTATAAAACAAGGAGAAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGAAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTTC AAAAAGCAGAAGAAAACGGCAACTGAAAAGGTGCTGTAAATGTAGAGAGCAAATAGCTGCCGCACAGATTTATGTGCGGCGTTTTTTGCCTTATAAAACAAGGAGAAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGAAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTTCATGAAATATCTTGTAGACAGCCGGG AAAAGGTGCTGTAAATGTAGAGAGCAAATAGCTGCCGCACAGATTTATGTGCGG 54 TTerm_0920 NZ_LR027880.1 2157828 2157842 15 2157849 2157863 15 6 93 0 25 56 43 57 42 0 2157845 AAAAACGTCTCTGCC GGAAGAGACGTTTTT True TTATAAAGA GTATGTCAG True True - AAAAACGTCTCTTCC ATAACA GGCAGAGACGTTTTT TCTTTATAA 74 RIL182_RS10065 intergenic 2157766 2157879 + down TCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTTGTATGTCAGCCGAATT AAACAATGGATGTGGTTTCTGCTAGTCAGATCATCTGTTCTGAAATGGCGGTCGGATATTCCGGCCGCCCTATAAGATTTATAAAGAAAAACGTCTCTGCCTGTTATGGAAGAGACGTTTTTGTATGTCAGCCGAATTTACGGACGCTTTGTGTTCTGATCCC AATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTT 51 TTerm_0921 NZ_LR027880.1 2157828 2157842 15 2157849 2157863 15 6 93 0 25 56 43 57 42 0 2157845 AAAAACGTCTCTGCC GGAAGAGACGTTTTT True TTATAAAGA GTATGTCAG True True - AAAAACGTCTCTTCC ATAACA GGCAGAGACGTTTTT TCTTTATAA 74 RIL182_RS10070 intergenic 2157766 2157879 - down AATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTTTCTTTATAAATCTTATAGGGCGGCCGGAATATCCGACCGCCATTTCAGAACAGATGATCTGA GGGATCAGAACACAAAGCGTCCGTAAATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTTTCTTTATAAATCTTATAGGGCGGCCGGAATATCCGACCGCCATTTCAGAACAGATGATCTGACTAGCAGAAACCACATCCATTGTTT AATTCGGCTGACATACAAAAACGTCTCTTCCATAACAGGCAGAGACGTTTT 51 TTerm_0922 NZ_LR027880.1 2158844 2158855 12 2158860 2158871 12 4 91 0 19 54 45 54 45 0 2158857 AAAAGGGATGGA TCCACCCCTTTT True TAACTAATA GTATCTGCA True True - AAAAGGGGTGGA GTGT TCCATCCCTTTT TATTAGTTA 70 RIL182_RS10080 intergenic 2158838 2158915 + down CTAATAAAAGGGATGGAACACTCCACCCCTTTTGTATCTGCATATTTATTTATGATTTCTTAACATTTTCTCAAGTC CATGAAAGACCGGAAGCAAAATTAACTAATAAAAGGGATGGAACACTCCACCCCTTTTGTATCTGCATATTTATTTATGATTTCTTAACATTTTCTCAAGTCTACCAGATGGAAGCTACACTTACCT GACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTT 71 TTerm_0923 NZ_LR027880.1 2158844 2158855 12 2158860 2158871 12 4 91 0 19 54 45 54 45 0 2158857 AAAAGGGATGGA TCCACCCCTTTT True TAACTAATA GTATCTGCA True True - AAAAGGGGTGGA GTGT TCCATCCCTTTT TATTAGTTA 70 RIL182_RS10085 intergenic 2158838 2158915 - down GACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTTTATTAG AGGTAAGTGTAGCTTCCATCTGGTAGACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTTTATTAGTTAATTTTGCTTCCGGTCTTTCATG GACTTGAGAAAATGTTAAGAAATCATAAATAAATATGCAGATACAAAAGGGGTGGAGTGTTCCATCCCTTT 71 TTerm_0924 NZ_LR027880.1 2163883 2163904 22 2163909 2163930 22 4 86 0 29 56 43 57 42 0 2163906 GATAGGAAAATGCCGTACGGTC GATCGTACGGCATTTTATTATC True TTATGAAAG GGTTGAATA True True - GATAATAAAATGCCGTACGATC AACC GACCGTACGGCATTTTCCTATC CTTTCATAA 82 RIL182_RS10095 intergenic 2163887 2164222 + down GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT TCATTATACGATTTATGAAAGATAGGAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTAT 339 TTerm_0925 NZ_LR027880.1 2163883 2163904 22 2163909 2163930 22 4 86 0 29 56 43 57 42 0 2163906 GATAGGAAAATGCCGTACGGTC GATCGTACGGCATTTTATTATC True TTATGAAAG GGTTGAATA True True - GATAATAAAATGCCGTACGATC AACC GACCGTACGGCATTTTCCTATC CTTTCATAA 82 RIL182_RS10105 intergenic 2163887 2164222 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTATCTTTCATAAATCGTATAATGA AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTAT 339 TTerm_0926 NZ_LR027880.1 2164192 2164205 14 2164210 2164223 14 4 85 0 18 42 57 41 58 0 2164207 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS10095 intergenic 2163887 2164222 + down GAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT TCATTATACGATTTATGAAAGATAGGAAAATGCCGTACGGTCGGTTGATCGTACGGCATTTTATTATCGGTTGAATAGTCATTTTTGTTCATTTACAAAGTACTCATAAAACTGAGCAAATGAATGTAAGTGATCACTATTATCTATTCTTGATACCAGAGCATCAAAGTATACTTTTTTTGCCATCTCCATAGGTTTTTTCTTACTGTACCGTACTCTGTTATATCTGCACATTTCATGTAAATAATGGAAATGATAAACAGCTATCGTTTCTTTTATATCGTCCGGCACAGCGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAATC AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0927 NZ_LR027880.1 2164192 2164205 14 2164210 2164223 14 4 85 0 18 42 57 41 58 0 2164207 AAAACATGCCGCCC GGGCGGCACATTTT True CTTTTTAAA ATTTCTTCT True True - AAAATGTGCCGCCC TGAT GGGCGGCATGTTTT TTTAAAAAG 84 RIL182_RS10105 intergenic 2163887 2164222 - down AAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTC GATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACGCTGTGCCGGACGATATAAAAGAAACGATAGCTGTTTATCATTTCCATTATTTACATGAAATGTGCAGATATAACAGAGTACGGTACAGTAAGAAAAAACCTATGGAGATGGCAAAAAAAGTATACTTTGATGCTCTGGTATCAAGAATAGATAATAGTGATCACTTACATTCATTTGCTCAGTTTTATGAGTACTTTGTAAATGAACAAAAATGACTATTCAACCGATAATAAAATGCCGTACGATCAACCGACCGTACGGCATTTTCCTATCTTTCATAAATCGTATAATGA AAATGTGCCGCCCTGATGGGCGGCATGTTT 30 TTerm_0928 NZ_LR027880.1 2168486 2168499 14 2168508 2168521 14 8 100 0 28 71 28 71 28 0 2168503 ATCAATATGCAATG CATTGCATATTGAT True CCATTAAAA AGTGCTAAA True False - ATCAATATGCAATG TGAATAGT CATTGCATATTGAT TTTTAATGG 80 RIL182_RS10130 intergenic 2168394 2168612 - down ACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAG AGACGGTTACAACGAAGAAAAGTTGACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAGGTGTTAAACGTGAAGCTGAAATGGA ACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGA 126 TTerm_0929 NZ_LR027880.1 2168529 2168543 15 2168548 2168562 15 4 93 0 25 43 56 42 57 0 2168545 AAAAAGTCCCCCGCC GGCGGAGGACTTTTT True TAGTGCTAA ATTACAACC True True - AAAAAGTCCTCCGCC ATAA GGCGGGGGACTTTTT TTAGCACTA 90 RIL182_RS10130 intergenic 2168394 2168612 - down ACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAG AGACGGTTACAACGAAGAAAAGTTGACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTTTTAGCACTATCAATATGCAATGTGAATAGTCATTGCATATTGATTTTAATGGAATTATAACAAAGGAAAAAGAGGTTATTTGTTCTCCTCATTCAAAATACTTAAGCAGAGTTGAAGAAAGGGAGGACATGTGAGGTGTTAAACGTGAAGCTGAAATGGA ACATTACTACCCGAAATTGATACTATAATTACAGAACAAGCGGTTGTAATAAAAAGTCCTCCGCCATAAGGCGGGGGACTTTT 83 TTerm_0930 NZ_LR027880.1 2177911 2177926 16 2177936 2177951 16 9 87 0 22 56 43 57 42 0 2177930 TAAGCAGTGATCTGTA TACAGACCGCTGCTTA True ATGAAAAAT AATTTTTGT True True - TAAGCAGCGGTCTGTA AAGAACAAA TACAGATCACTGCTTA ATTTTTCAT 60 RIL182_RS10170 intergenic 2177913 2177935 + down GCAGTGATCTGTATTTGTTCTT TTTAGGTGTCAGAAATGAAAAATAAGCAGTGATCTGTATTTGTTCTTTACAGACCGCTGCTTAAATTTTTGT AAGAACAAATACAGATCACTGCTT 24 TTerm_0931 NZ_LR027880.1 2177911 2177926 16 2177936 2177951 16 9 87 0 22 56 43 57 42 0 2177930 TAAGCAGTGATCTGTA TACAGACCGCTGCTTA True ATGAAAAAT AATTTTTGT True True - TAAGCAGCGGTCTGTA AAGAACAAA TACAGATCACTGCTTA ATTTTTCAT 60 RIL182_RS10175 intergenic 2177913 2177935 - down AAGAACAAATACAGATCACTGC ACAAAAATTTAAGCAGCGGTCTGTAAAGAACAAATACAGATCACTGCTTATTTTTCATTTCTGACACCTAAA AAGAACAAATACAGATCACTGCTT 24 TTerm_0932 NZ_LR027880.1 2194970 2194980 11 2194985 2194995 11 4 81 0 12 45 54 44 55 0 2194982 AAAGGCAGCCA TGACTGCCCTT True GCATGACAA GCACAATTA True False - AAGGGCAGTCA ATAA TGGCTGCCTTT TTGTCATGC 48 RIL182_RS10255 intergenic 2194811 2195151 + down GAGGTCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCATCTGCTTATTTTTTGCATGACAAAAGGCAGCCATTATTGACTGCCCTTGCACAATTACGATATTCACTTATATCTTTATTATTACTGCCCTGATTCGTTTTGATTTCTGCAATGTACTCCTGTCTCCTTTCTGCACCTGTCGCTGTAAATGTTTTTTACAAATAAAAAAGACAACCAAGATTTTGTTTCTTAATTGCCTGTTTC CGAAGTAGAATTCAACCTCGAATAAGAGGTCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTGCTAATTTATGGTTGACTTTTCATAGCTGGTCTCCATCTGCTTATTTTTTGCATGACAAAAGGCAGCCATTATTGACTGCCCTTGCACAATTACGATATTCACTTATATCTTTATTATTACTGCCCTGATTCGTTTTGATTTCTGCAATGTACTCCTGTCTCCTTTCTGCACCTGTCGCTGTAAATGTTTTTTACAAATAAAAAAGACAACCAAGATTTTGTTTCTTAATTGCCTGTTTCTATGCTATCAAATTTTTATTGAAAC GAAACAGGCAATTAAGAAACAAAATCTTGGTTGTCTTTTTTATTTGTAAAAAACATTTACAGCGACAGGTGCAGAAAGGAGACAGGAGTACATTGCAGAAATCAAAACGAATCAGGGCAGTAATAATAAAGATATAAGTGAATATCGTAATTGTGCAAGGGCAGTCAATAATGGCTGCCTT 181 TTerm_0933 NZ_LR027880.1 2194970 2194980 11 2194985 2194995 11 4 81 0 12 45 54 44 55 0 2194982 AAAGGCAGCCA TGACTGCCCTT True GCATGACAA GCACAATTA True False - AAGGGCAGTCA ATAA TGGCTGCCTTT TTGTCATGC 48 RIL182_RS10260 intergenic 2194811 2195151 - down GAAACAGGCAATTAAGAAACAAAATCTTGGTTGTCTTTTTTATTTGTAAAAAACATTTACAGCGACAGGTGCAGAAAGGAGACAGGAGTACATTGCAGAAATCAAAACGAATCAGGGCAGTAATAATAAAGATATAAGTGAATATCGTAATTGTGCAAGGGCAGTCAATAATGGCTGCCTTTTGTCATGCAAAAAATAAGCAGATGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGACCTC GTTTCAATAAAAATTTGATAGCATAGAAACAGGCAATTAAGAAACAAAATCTTGGTTGTCTTTTTTATTTGTAAAAAACATTTACAGCGACAGGTGCAGAAAGGAGACAGGAGTACATTGCAGAAATCAAAACGAATCAGGGCAGTAATAATAAAGATATAAGTGAATATCGTAATTGTGCAAGGGCAGTCAATAATGGCTGCCTTTTGTCATGCAAAAAATAAGCAGATGGAGACCAGCTATGAAAAGTCAACCATAAATTAGCAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGACCTCTTATTCGAGGTTGAATTCTACTTCG GAAACAGGCAATTAAGAAACAAAATCTTGGTTGTCTTTTTTATTTGTAAAAAACATTTACAGCGACAGGTGCAGAAAGGAGACAGGAGTACATTGCAGAAATCAAAACGAATCAGGGCAGTAATAATAAAGATATAAGTGAATATCGTAATTGTGCAAGGGCAGTCAATAATGGCTGCCTT 181 TTerm_0934 NZ_LR027880.1 2201825 2201835 11 2201840 2201850 11 4 90 0 17 50 50 50 50 0 2201837 CAGGAAGAACA TGCTCTTCCTG True TTAAAAAAC CATTTGTAT True False - CAGGAAGAGCA GAAA TGTTCTTCCTG GTTTTTTAA 58 RIL182_RS10305 intergenic 2201781 2202111 - down AAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTCCTGTTATGTGGTTATCGTAAGCAGAGAAGATTAAGTGACGAGCAGAGGAAACAGGCAAGGTTGCGATGGAGAAAATCAATTCAGACGAAAACAATAGGCAAATTTAAAGTTGATAAGAATTCACCGATATACCTCAATAGTTTTTTGAAATTCCCGTGTGAGGGGGAAAGTTGATTACAAACAGAATAAATTACAGCAGTGAAAGTGACGATACAAATGCAGGAAGAGCAGAAATGTTCTTCCTGTTTTTTAACAGAACTTCAGCAGCTGGCGGGGAAAGGAGACAGT CCAAGAGTCAGGAAGCAAGTTTATAAAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTCCTGTTATGTGGTTATCGTAAGCAGAGAAGATTAAGTGACGAGCAGAGGAAACAGGCAAGGTTGCGATGGAGAAAATCAATTCAGACGAAAACAATAGGCAAATTTAAAGTTGATAAGAATTCACCGATATACCTCAATAGTTTTTTGAAATTCCCGTGTGAGGGGGAAAGTTGATTACAAACAGAATAAATTACAGCAGTGAAAGTGACGATACAAATGCAGGAAGAGCAGAAATGTTCTTCCTGTTTTTTAACAGAACTTCAGCAGCTGGCGGGGAAAGGAGACAGTATGGCAAAGTTCTTAAATTATGAGG AAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTCCTGTTATGTGGTTATCGTAAGCAGAGAAGATTAAGTGACGAGCAGAGGAAACAGGCAAGGTTGCGATGGAGAAAATCAATTCAGACGAAAACAATAGGCAAATTTAAAGTTGATAAGAATTCACCGATATACCTCAATAGTTTTTTGAAATTCCCGTGTGAGGGGGAAAGTTGATTACAAACAGAATAAATTACAGCAGTGAAAGTGACGATACAAATGCAGGAAGAGCAGAAATGTTCTTCCT 286 TTerm_0935 NZ_LR027880.1 2202069 2202083 15 2202088 2202102 15 4 86 0 20 53 46 53 46 0 2202085 GGAAAAAGCAGATAG CTACCTGCTCTTTCC True ACATAACAG ATAAACCTT True False - GGAAAGAGCAGGTAG CAAT CTATCTGCTTTTTCC CTGTTATGT 64 RIL182_RS10305 intergenic 2201781 2202111 - down AAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTCCTGTTATGTGGTTATCGTAAGCAGAGAAGATTAAGTGACGAGCAGAGGAAACAGGCAAGGTTGCGATGGAGAAAATCAATTCAGACGAAAACAATAGGCAAATTTAAAGTTGATAAGAATTCACCGATATACCTCAATAGTTTTTTGAAATTCCCGTGTGAGGGGGAAAGTTGATTACAAACAGAATAAATTACAGCAGTGAAAGTGACGATACAAATGCAGGAAGAGCAGAAATGTTCTTCCTGTTTTTTAACAGAACTTCAGCAGCTGGCGGGGAAAGGAGACAGT CCAAGAGTCAGGAAGCAAGTTTATAAAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTCCTGTTATGTGGTTATCGTAAGCAGAGAAGATTAAGTGACGAGCAGAGGAAACAGGCAAGGTTGCGATGGAGAAAATCAATTCAGACGAAAACAATAGGCAAATTTAAAGTTGATAAGAATTCACCGATATACCTCAATAGTTTTTTGAAATTCCCGTGTGAGGGGGAAAGTTGATTACAAACAGAATAAATTACAGCAGTGAAAGTGACGATACAAATGCAGGAAGAGCAGAAATGTTCTTCCTGTTTTTTAACAGAACTTCAGCAGCTGGCGGGGAAAGGAGACAGTATGGCAAAGTTCTTAAATTATGAGG AAGGTTTATGGAAAGAGCAGGTAGCAATCTATCTGCTTTTTC 42 TTerm_0936 NZ_LR027880.1 2230431 2230442 12 2230450 2230461 12 7 91 0 19 62 37 63 36 0 2230445 AAGCAGCAAATC GATTTACTGCTT True CGCAAAAAA CATGTGCCG True False - AAGCAGTAAATC CGAAAAA GATTTGCTGCTT TTTTTTGCG 46 RIL182_RS10410 intergenic 2229915 2230502 - down ACATAGAAACTGAATATCCCGCCGCCCCGCAGCGGCACATGAAGCAGTAAATCCGAAAAAGATTTGCTGCTTTTTTTGCGCTCATTTTTGGCAAATTTCCAAAAGTTCCGTATTAGATAGTGAAACCAAAAAAGGCTGCCGTTTTTTTTAGACAGCGGGCAAAACGCAGCTTCCGAAACGCCTTATTGTCGGGAAAGACCGAGCCGCCGGAAAAGTTCTTGCCGGAAAGTCCGTCATTTTTGCTTTTTGCGGTGTTGTAGGGAGTAAGAGGAAGAACGCCAGCCCGCAGCCTTTTATGAAAAAGCTGGTTATAGATTTTCTGAAAAAGTGGCAGTAGGAAGTGAACGGCAGTCCGGCAGTTTCTTAGAGCAAGATTCTACCGCAGTACCAAAATTCGCTTATCGCTCATTTTGCCCCTGCGGGAATCTTGTTGGGGAGTGCCTTCCCCAAACCCTGCCATGCGGCTTACGCCGCTTAAAAATCCCTCAAAATATTTTTTCGGATTTTTCAAAAACAGTTCCGCTTCACACCCTGTTTTTCTCCTATTAGTGAGAGGACACCATACACAGAAAGGAGGTCTGTCGACC ACATAGAAACTGAATATCCCGCCGCCCCGCAGCGGCACATGAAGCAGTAAATCCGAAAAAGATTTGCTGCT 71 TTerm_0937 NZ_LR027880.1 2242849 2242866 18 2242871 2242888 18 4 88 0 26 72 27 75 25 0 2242868 AAGGACATTCCTCTAAAA TTTTAGAAAAATGTCCTT True TAACAAAAA ATAGTACAA True False - AAGGACATTTTTCTAAAA GAAA TTTTAGAGGAATGTCCTT TTTTTGTTA 60 RIL182_RS21255 intergenic 2242801 2243031 - down AAAAAGACCAATAAAATCAAGGGTTTGCGGACTTCCAACTTGTATGGTACGACAGGAGTACGACAAAATAACCTATCTTAAAGGGTTAAAACAAACGATTTTAAATTAAAATCGAGTCAGTTCAAGTTCATATTTTGTACTATAAGGACATTTTTCTAAAAGAAATTTTAGAGGAATGTCCTTTTTTGTTATGGTCAACCGAACAAAATAAGAAAATGGAGGAAGTCAGT TTCCCGACAATGAAGTCATTGGATAAAAAAGACCAATAAAATCAAGGGTTTGCGGACTTCCAACTTGTATGGTACGACAGGAGTACGACAAAATAACCTATCTTAAAGGGTTAAAACAAACGATTTTAAATTAAAATCGAGTCAGTTCAAGTTCATATTTTGTACTATAAGGACATTTTTCTAAAAGAAATTTTAGAGGAATGTCCTTTTTTGTTATGGTCAACCGAACAAAATAAGAAAATGGAGGAAGTCAGTATGAACAGTACAGCGTTAGGAGCAG AAAAAGACCAATAAAATCAAGGGTTTGCGGACTTCCAACTTGTATGGTACGACAGGAGTACGACAAAATAACCTATCTTAAAGGGTTAAAACAAACGATTTTAAATTAAAATCGAGTCAGTTCAAGTTCATATTTTGTACTATAAGGACATTTTTCTAAAAGAAATTTTAGAGGAATGTCCT 182 TTerm_0938 NZ_LR027880.1 2253466 2253479 14 2253488 2253501 14 8 92 0 23 60 39 61 38 0 2253483 AAAAGAAGCTGCTT AAGCAGCTTCTCTT True TATTACATA CGTATTTTT True True - AAGAGAAGCTGCTT TGAAATAT AAGCAGCTTCTTTT TATGTAATA 70 RIL182_RS10530 intergenic 2253412 2253637 - down ACAAAAGATCATATGGTACAGAAGATTTTTAAAGTACAGAAGAAGTAAAGAGTACAAAAGAAAGTTTACTGTACAGAAGAATATTCGGTATACAGATGAAAAATCATTGATATACAAAGGAATATTTAAAAATACGAAGAGAAGCTGCTTTGAAATATAAGCAGCTTCTTTTATGTAATAAAATGACGGAAATCAAAGGTATTTGATACAGAAACGGAGATTAGC GTAGGAAACGGCATTTTGGGTTTATACAAAAGATCATATGGTACAGAAGATTTTTAAAGTACAGAAGAAGTAAAGAGTACAAAAGAAAGTTTACTGTACAGAAGAATATTCGGTATACAGATGAAAAATCATTGATATACAAAGGAATATTTAAAAATACGAAGAGAAGCTGCTTTGAAATATAAGCAGCTTCTTTTATGTAATAAAATGACGGAAATCAAAGGTATTTGATACAGAAACGGAGATTAGCGTGAAAAAAAGAAATATGCCAAAAA ACAAAAGATCATATGGTACAGAAGATTTTTAAAGTACAGAAGAAGTAAAGAGTACAAAAGAAAGTTTACTGTACAGAAGAATATTCGGTATACAGATGAAAAATCATTGATATACAAAGGAATATTTAAAAATACGAAGAGAAGCTGCTTTGAAATATAAGCAGCTTCTTT 171 TTerm_0939 NZ_LR027880.1 2255174 2255184 11 2255190 2255200 11 5 100 0 22 45 54 45 54 0 2255186 ATCGGGTGTGA TCACACCCGAT True ATTAAAAAA CAAAATCCA True False - ATCGGGTGTGA CTGGT TCACACCCGAT TTTTTTAAT 68 RIL182_RS10540 intergenic 2254969 2255222 - down AATCATATTGATGTGGATTTTGATCGGGTGTGACTGGTTCACACCCGATTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGTGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTGTTACTTTTTGTTCTAAGGATGGGGTAAGTGTTAAAATAAATGACAGGAATTTTATGGAAAAGGGGGAATGATTGTT TAGTTTCTGCAGGTCCTCAGAAATAAATCATATTGATGTGGATTTTGATCGGGTGTGACTGGTTCACACCCGATTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGTGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACTCTTTGTTACTTTTTGTTCTAAGGATGGGGTAAGTGTTAAAATAAATGACAGGAATTTTATGGAAAAGGGGGAATGATTGTTATGCTGACATATGGAATTGACTGGG AATCATATTGATGTGGATTTTGATCGGGTGTGACTGGTTCACACCCGA 48 TTerm_0940 NZ_LR027880.1 2261015 2261027 13 2261032 2261044 13 4 100 0 26 53 46 53 46 0 2261029 AAAAACGCTGACC GGTCAGCGTTTTT True TCCAATGGA TATCTGCTA True True - AAAAACGCTGACC GGCG GGTCAGCGTTTTT TCCATTGGA 84 RIL182_RS10560 intergenic 2261025 2261051 + down CCCGCCGGTCAGCGTTTTTTATCTGC ATATATTCCAATGGAAAAACGCTGACCCGCCGGTCAGCGTTTTTTATCTGCTATCGTTCTATCTTAAGTTCAAACC GCAGATAAAAAACGCTGACCGGCGGGTCAGCGTTTT 36 TTerm_0941 NZ_LR027880.1 2261015 2261027 13 2261032 2261044 13 4 100 0 26 53 46 53 46 0 2261029 AAAAACGCTGACC GGTCAGCGTTTTT True TCCAATGGA TATCTGCTA True True - AAAAACGCTGACC GGCG GGTCAGCGTTTTT TCCATTGGA 84 RIL182_RS10565 intergenic 2261025 2261051 - down GCAGATAAAAAACGCTGACCGGCGGG GGTTTGAACTTAAGATAGAACGATAGCAGATAAAAAACGCTGACCGGCGGGTCAGCGTTTTTCCATTGGAATATAT GCAGATAAAAAACGCTGACCGGCGGGTCAGCGTTTT 36 TTerm_0942 NZ_LR027880.1 2265244 2265257 14 2265262 2265275 14 4 100 0 28 42 57 42 57 0 2265259 AAAACGGCTGTGCC GGCACAGCCGTTTT True GAACAGTAA CTATTCTTT True True - AAAACGGCTGTGCC CAAA GGCACAGCCGTTTT TTACTGTTC 88 RIL182_RS10585 intergenic 2265198 2265285 + down ACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTTCTATTCTTTT TGAGTTGATTCATAATGAACTGTAAACAGGTACATCATAAACAATAGAGTGACTGTTATTATGAACAGTAAAAACGGCTGTGCCTTTGGGCACAGCCGTTTTCTATTCTTTTTACATTCCGAGGAACTGTTTTACAA AAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTT 41 TTerm_0943 NZ_LR027880.1 2265244 2265257 14 2265262 2265275 14 4 100 0 28 42 57 42 57 0 2265259 AAAACGGCTGTGCC GGCACAGCCGTTTT True GAACAGTAA CTATTCTTT True True - AAAACGGCTGTGCC CAAA GGCACAGCCGTTTT TTACTGTTC 88 RIL182_RS10590 intergenic 2265198 2265285 - down AAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTTTTACTGTTCATAATAACAGTCACTCTATTGTTTATGATGTACCTGT TTGTAAAACAGTTCCTCGGAATGTAAAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTTTTACTGTTCATAATAACAGTCACTCTATTGTTTATGATGTACCTGTTTACAGTTCATTATGAATCAACTCA AAAAGAATAGAAAACGGCTGTGCCCAAAGGCACAGCCGTTT 41 TTerm_0944 NZ_LR027880.1 2280854 2280867 14 2280873 2280886 14 5 92 0 23 67 32 69 30 0 2280869 AAAACAGCCTATCA TGATAAGCTGTTTT True CAAATAATA TAATTATGT True True - AAAACAGCTTATCA GGAAA TGATAGGCTGTTTT TATTATTTG 54 RIL182_RS10650 intergenic 2280835 2280900 - down ACAGTACATAATTAAAAACAGCTTATCAGGAAATGATAGGCTGTTTTATTATTTGGAGGTTGAAA CATCCTTCTTCTTTGAGAAAAAGTAACAGTACATAATTAAAAACAGCTTATCAGGAAATGATAGGCTGTTTTATTATTTGGAGGTTGAAAATGAAAAAAATATATAAAAGAATAT ACAGTACATAATTAAAAACAGCTTATCAGGAAATGATAGGCTGTTT 46 TTerm_0945 NZ_LR027880.1 2288725 2288741 17 2288748 2288764 17 6 88 0 24 52 47 53 46 0 2288744 AAATGCCACAGCAGCAT ATACTGCCGTGGCATTT True AAAACAAAA CATCAATCA True False - AAATGCCACGGCAGTAT TTTAGG ATGCTGCTGTGGCATTT TTTTGTTTT 64 RIL182_RS10685 intergenic 2288648 2288782 - down ATTAGAATATGATTGATGAAATGCCACGGCAGTATTTTAGGATGCTGCTGTGGCATTTTTTGTTTTGCTGAAATATTGCTTTTTACAAAGAAAAGAATTAGAATCATCCTATAAATGATAAAGGATATAAGAAA CAAAGAATGGTGCATATCCGGTATAATTAGAATATGATTGATGAAATGCCACGGCAGTATTTTAGGATGCTGCTGTGGCATTTTTTGTTTTGCTGAAATATTGCTTTTTACAAAGAAAAGAATTAGAATCATCCTATAAATGATAAAGGATATAAGAAAATGGAAAATTTTGAACGGAAAACGT ATTAGAATATGATTGATGAAATGCCACGGCAGTATTTTAGGATGCTGCTGTGGCATT 57 TTerm_0946 NZ_LR027880.1 2295512 2295523 12 2295528 2295539 12 4 83 0 14 79 20 80 20 0 2295525 ATGCTCATTTTT AAAAAAAAGCAT True CGCAAAAAA ACGAAACCA True False - ATGCTTTTTTTT CACA AAAAATGAGCAT TTTTTTGCG 28 RIL182_RS10715 intergenic 2295456 2295551 - down ATCTGGTTTCGTATGCTTTTTTTTCACAAAAAATGAGCATTTTTTGCGTATTATATACATAAGGATTGATGAAATGCTTTTTTGGAGTCTGGTGT AAATGCATATGAAACTGGATATCTGATCTGGTTTCGTATGCTTTTTTTTCACAAAAAATGAGCATTTTTTGCGTATTATATACATAAGGATTGATGAAATGCTTTTTTGGAGTCTGGTGTATGTGGAAAAAACTGCTGGCATGGA ATCTGGTTTCGTATGCTTTTTTTTCACAAAAAATGAGCA 39 TTerm_0947 NZ_LR027880.1 2303412 2303431 20 2303441 2303460 20 9 90 0 30 75 25 77 22 0 2303435 AAAAAAGAACTGCACGTTAA TTAACATACAGTTCTTTTTT True GGTATTACA CAAATCCAT True True - AAAAAAGAACTGTATGTTAA AGATAGTTA TTAACGTGCAGTTCTTTTTT TGTAATACC 68 RIL182_RS10745 intergenic 2303378 2303518 + down TGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTTCAAATCCATATATCTTGTATATAGATTATTTATAATTTTTAAACTATTTGTTTTTTCT AGTGGACGGAATTATGGGATTGTAATGCCGATGAGGCCATTCTATTGTCAGGTATTACAAAAAAGAACTGCACGTTAATAACTATCTTTAACATACAGTTCTTTTTTCAAATCCATATATCTTGTATATAGATTATTTATAATTTTTAAACTATTTGTTTTTTCTTATGCCTCTGCCGGAACATCCTTCA AGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTT 106 TTerm_0948 NZ_LR027880.1 2303412 2303431 20 2303441 2303460 20 9 90 0 30 75 25 77 22 0 2303435 AAAAAAGAACTGCACGTTAA TTAACATACAGTTCTTTTTT True GGTATTACA CAAATCCAT True True - AAAAAAGAACTGTATGTTAA AGATAGTTA TTAACGTGCAGTTCTTTTTT TGTAATACC 68 RIL182_RS10750 intergenic 2303378 2303518 - down AGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTTTGTAATACCTGACAATAGAATGGCCTCATCGGCA TGAAGGATGTTCCGGCAGAGGCATAAGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTTTGTAATACCTGACAATAGAATGGCCTCATCGGCATTACAATCCCATAATTCCGTCCACT AGAAAAAACAAATAGTTTAAAAATTATAAATAATCTATATACAAGATATATGGATTTGAAAAAAGAACTGTATGTTAAAGATAGTTATTAACGTGCAGTTCTTTTT 106 TTerm_0949 NZ_LR027880.1 2305762 2305772 11 2305778 2305788 11 5 100 0 22 45 54 45 54 0 2305774 ATCGAGTGGAG CTCCACTCGAT True AACTGAAAA AAAACCGTA True False - ATCGAGTGGAG ACTTA CTCCACTCGAT TTTTCAGTT 76 RIL182_RS10755 intergenic 2305611 2305869 - down AGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGC TTGAGCGCTTAGGTCTTAGAAAATAAGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGCATGTATAAAAGTTTTTCAATGGAAC AGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGA 107 TTerm_0950 NZ_LR027880.1 2305792 2305802 11 2305808 2305818 11 5 90 0 17 59 40 60 40 0 2305804 ACCGTATGAAA TTCCATACGGT True TCGATAAAA ATCCATACA True False - ACCGTATGGAA TCTGT TTTCATACGGT TTTTATCGA 50 RIL182_RS10755 intergenic 2305611 2305869 - down AGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGC TTGAGCGCTTAGGTCTTAGAAAATAAGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGGTTTTATCGAGTGGAGACTTACTCCACTCGATTTTCAGTTAAAATAAGAAAGAATCCTGTGAAAACAGGTTCTTTGCCAAAGGCAGAAGTATATTTCCGAGACCACTGAAAAATGTATGAGAGGTCGTGGATTTTTCAGTAGTTTCGGTGCTTCTGTCTCCACAGAGAAAAGGAGAAAACGCATGTATAAAAGTTTTTCAATGGAAC AGATCTTCTCCATACAGAGCCGCTTCCGCATGGAGGCTGGCATGTATGGATACCGTATGGAATCTGTTTTCATACGG 77 TTerm_0951 NZ_LR027880.1 2315768 2315775 8 2315783 2315790 8 7 100 0 16 50 50 50 50 0 2315778 TGCTATGC GCATAGCA True AAAATGCCT TGTGCCCTT True False - TGCTATGC AAAAACA GCATAGCA AGGCATTTT 56 RIL182_RS10805 intergenic 2315732 2315853 - down AAGATGAACTAAAGGAGGAAAATCCTGCCCAGTGTGCTGGGCATTGCTCCCTGCAAGGGCACATGCTATGCAAAAACAGCATAGCAGGCATTTTGCTCCGCAAAACAAGGAGGATTTAATA TGATCCGTCTGGCATTTGACTTTTAAAGATGAACTAAAGGAGGAAAATCCTGCCCAGTGTGCTGGGCATTGCTCCCTGCAAGGGCACATGCTATGCAAAAACAGCATAGCAGGCATTTTGCTCCGCAAAACAAGGAGGATTTAATAATGAGTAATAATGAGTTGTTAGAAG AAGATGAACTAAAGGAGGAAAATCCTGCCCAGTGTGCTGGGCATTGCTCCCTGCAAGGGCACATGCTATGCAAAAACAGCATAGC 85 TTerm_0952 NZ_LR027880.1 2316475 2316483 9 2316489 2316497 9 5 88 0 13 83 16 87 12 0 2316485 AAAATGCAA TTACATTTT True TCCTCTTTA TTTCTGACA True True - AAAATGTAA AAGGC TTGCATTTT TAAAGAGGA 34 RIL182_RS10810 intergenic 2316320 2316606 - down ACTCACTGTTATTTCGAAAGAGATAAACAGCCCAACCCGGAAGTTGTCAGTATGCCAGATGGTATATTGGCAATTTTTTATGTTGTATGATTTTATTGTTTGTCAGAAAAAAATGTAAAAGGCTTGCATTTTAAAGAGGAAAGTGTTACATTAATAAATGATAACACGATGACTTGATTGAGAGAGGACGAAAGCCCTCTCTCAATTCACGTTTAGGAGCCATGTATTTCTGCAACAGAAATGCATGCAGAAGTAAAACTGAATATGGAAGAAAGAAGGTGTACAC CAGGGGTTCGATTCCCCTACGAGCTACTCACTGTTATTTCGAAAGAGATAAACAGCCCAACCCGGAAGTTGTCAGTATGCCAGATGGTATATTGGCAATTTTTTATGTTGTATGATTTTATTGTTTGTCAGAAAAAAATGTAAAAGGCTTGCATTTTAAAGAGGAAAGTGTTACATTAATAAATGATAACACGATGACTTGATTGAGAGAGGACGAAAGCCCTCTCTCAATTCACGTTTAGGAGCCATGTATTTCTGCAACAGAAATGCATGCAGAAGTAAAACTGAATATGGAAGAAAGAAGGTGTACACATGTCAAAACGTGAAACATACGAAA ACTCACTGTTATTTCGAAAGAGATAAACAGCCCAACCCGGAAGTTGTCAGTATGCCAGATGGTATATTGGCAATTTTTTATGTTGTATGATTTTATTGTTTGTCAGAAAAAAATGTAAAAGGCTTGCATTT 131 TTerm_0953 NZ_LR027880.1 2318193 2318206 14 2318216 2318229 14 9 100 0 28 71 28 71 28 0 2318210 AAAACGACTGTAAA TTTACAGTCGTTTT True TGTAAAGAA CCGTGTTTT True True - AAAACGACTGTAAA CGTAAAAAA TTTACAGTCGTTTT TTCTTTACA 64 RIL182_RS10830 intergenic 2318094 2318352 - down ATCTGCATAGCTGAAACAGGGAAAGTTGTCAAAGGAAGAGATTGCAGACGGTGTGGGACTTACGATAGAAGAGGTCGATGTCTTTGCGCAGGAATAAATAATTTATAAATGATAAAAACACGGAAAACGACTGTAAACGTAAAAAATTTACAGTCGTTTTTCTTTACAAATAATAATATGGTTATTGTTGACATATTATATATTGAATGATACCATTATATATAGTAATAAAAACTATATACAATAGAGGGAAAGACA ACAATCCGAACGGATATGACGATTGATCTGCATAGCTGAAACAGGGAAAGTTGTCAAAGGAAGAGATTGCAGACGGTGTGGGACTTACGATAGAAGAGGTCGATGTCTTTGCGCAGGAATAAATAATTTATAAATGATAAAAACACGGAAAACGACTGTAAACGTAAAAAATTTACAGTCGTTTTTCTTTACAAATAATAATATGGTTATTGTTGACATATTATATATTGAATGATACCATTATATATAGTAATAAAAACTATATACAATAGAGGGAAAGACAATGAAGAAAATTTTTTCAATGAATC ATCTGCATAGCTGAAACAGGGAAAGTTGTCAAAGGAAGAGATTGCAGACGGTGTGGGACTTACGATAGAAGAGGTCGATGTCTTTGCGCAGGAATAAATAATTTATAAATGATAAAAACACGGAAAACGACTGTAAACGTAAAAAATTTACAGTCGTTT 159 TTerm_0954 NZ_LR027880.1 2322396 2322407 12 2322413 2322424 12 5 100 0 24 66 33 66 33 0 2322409 AAAAGTGGATAG CTATCCACTTTT True GCATTAAAA AATACTCAA True True - AAAAGTGGATAG TCTGC CTATCCACTTTT TTTTAATGC 72 RIL182_RS10860 intergenic 2322342 2322656 - down ATTAATATCAGGATAGAAAGTTTAAGAATGTCTTAGCAGGGGACATTCTTAAACTTTAAAAAGTACTTGACAGAGATTTTTTGAAGTGGTATAGTATAATAGTTGTTGAAAACAAAGTAGAGTATCCACTCTCACCGGAGCACCAGCATTCGTGTGACTCATGGTTTTATATTCAAGGCATCGGGAATATTCCTGTTGTTTGAAGTACCGCACCTTGCGAGTATTGAGTATTAAAAGTGGATAGTCTGCCTATCCACTTTTTTTAATGCAAGTAAAGAATAATATTTTGGAGGTGCAATACCATTAGCGAGTTA GTAAATACATTCTTCCACAGGAATAATTAATATCAGGATAGAAAGTTTAAGAATGTCTTAGCAGGGGACATTCTTAAACTTTAAAAAGTACTTGACAGAGATTTTTTGAAGTGGTATAGTATAATAGTTGTTGAAAACAAAGTAGAGTATCCACTCTCACCGGAGCACCAGCATTCGTGTGACTCATGGTTTTATATTCAAGGCATCGGGAATATTCCTGTTGTTTGAAGTACCGCACCTTGCGAGTATTGAGTATTAAAAGTGGATAGTCTGCCTATCCACTTTTTTTAATGCAAGTAAAGAATAATATTTTGGAGGTGCAATACCATTAGCGAGTTAATGATTAATGAACAGATCAGAGACA ATTAATATCAGGATAGAAAGTTTAAGAATGTCTTAGCAGGGGACATTCTTAAACTTTAAAAAGTACTTGACAGAGATTTTTTGAAGTGGTATAGTATAATAGTTGTTGAAAACAAAGTAGAGTATCCACTCTCACCGGAGCACCAGCATTCGTGTGACTCATGGTTTTATATTCAAGGCATCGGGAATATTCCTGTTGTTTGAAGTACCGCACCTTGCGAGTATTGAGTATTAAAAGTGGATAGTCTGCCTATCCACTTT 260 TTerm_0955 NZ_LR027880.1 2334237 2334251 15 2334261 2334275 15 9 100 0 30 60 40 60 40 0 2334255 AAAAAACACAGGGGA TCCCCTGTGTTTTTT True TATGTTCAA CTATGCAAA True True - AAAAAACACAGGGGA TAACGGAAG TCCCCTGTGTTTTTT TTGAACATA 92 RIL182_RS10900 intergenic 2334201 2334276 + down TCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTTC GGGAACTGGTTCTTCTGACAAATGATCCTGCACCGGATCCACAGTTTCGTTTTATGTTCAAAAAAACACAGGGGACTTCCGTTATCCCCTGTGTTTTTTCTATGCAAAATCAAACAGTGAGAGCT GAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTT 39 TTerm_0956 NZ_LR027880.1 2334237 2334251 15 2334261 2334275 15 9 100 0 30 60 40 60 40 0 2334255 AAAAAACACAGGGGA TCCCCTGTGTTTTTT True TATGTTCAA CTATGCAAA True True - AAAAAACACAGGGGA TAACGGAAG TCCCCTGTGTTTTTT TTGAACATA 92 RIL182_RS10905 intergenic 2334201 2334276 - down GAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTTTTGAACATAAAACGAAACTGTGGATCCGGTGCAGGA AGCTCTCACTGTTTGATTTTGCATAGAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTTTTGAACATAAAACGAAACTGTGGATCCGGTGCAGGATCATTTGTCAGAAGAACCAGTTCCC GAAAAAACACAGGGGATAACGGAAGTCCCCTGTGTTTTT 39 TTerm_0957 NZ_LR027880.1 2342225 2342240 16 2342245 2342260 16 4 93 0 27 65 34 66 33 0 2342242 GTGCGAAAAATAAGCT AGCTTATTTTTCACAC True AAATAGCCG TAATATCCT True True - GTGTGAAAAATAAGCT TGAT AGCTTATTTTTCGCAC CGGCTATTT 70 RIL182_RS10925 intergenic 2342105 2342274 - down AACAGAGGATATTAGTGTGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAACAAATAGCTTTGATGGCAAGGCATAAAAAATATGCCTCCGAGAATTTGAGATTCTCGTCGCCTCTTCGCAACAAGTTGCTTAGAAAAGAGGATTTGT TTGCAGCAAATTTTATTGTATTGTAAACAGAGGATATTAGTGTGAAAAATAAGCTTGATAGCTTATTTTTCGCACGGCTATTTGTTTCTGAGCAAAACAAATAGCTTTGATGGCAAGGCATAAAAAATATGCCTCCGAGAATTTGAGATTCTCGTCGCCTCTTCGCAACAAGTTGCTTAGAAAAGAGGATTTGTATGAAAAAAATAGCAATCTTAGGCT AACAGAGGATATTAGTGTGAAAAATAAGCTTGATAGCTTATTTTTCGCA 49 TTerm_0958 NZ_LR027880.1 2347178 2347196 19 2347201 2347219 19 4 89 0 28 78 21 82 17 0 2347198 AAAAAAGCGCAAAAAAATT AATTTTTTCGCACTTTTTT True TTTCAAATA TATTATTGT True True - AAAAAAGTGCGAAAAAATT AATC AATTTTTTTGCGCTTTTTT TATTTGAAA 56 RIL182_RS10955 intergenic 2347114 2347258 - down AAATAGTACAATAGAAATAAAAATAATCAGACAATAATAAAAAAAGTGCGAAAAAATTAATCAATTTTTTTGCGCTTTTTTATTTGAAAAATAGAAAAATGTGTTACAATAGATAGGTACTAACGATTACCTTGGGGGTATTGT TTATTGCAAACATACTTGGAAAATAAAATAGTACAATAGAAATAAAAATAATCAGACAATAATAAAAAAAGTGCGAAAAAATTAATCAATTTTTTTGCGCTTTTTTATTTGAAAAATAGAAAAATGTGTTACAATAGATAGGTACTAACGATTACCTTGGGGGTATTGTATGCAGGATAAAGATTCAGAAGTAC AAATAGTACAATAGAAATAAAAATAATCAGACAATAATAAAAAAAGTGCGAAAAAATTAATCAATTTTTTTGCGCTTTTT 80 TTerm_0959 NZ_LR027880.1 2360802 2360807 6 2360814 2360819 6 6 100 0 12 100 0 100 0 0 2360810 TTATAT ATATAA True CTCCAAAAT AAGGGACGT True False - TTATAT CATAAA ATATAA ATTTTGGAG 24 RIL182_RS11030 intergenic 2360784 2360868 - down AGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAA CTGATGAGGCAGTAGAGGAAGCATAAGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAAATGGCTATTACAGCAGCTATGGTAA AGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATA 66 TTerm_0960 NZ_LR027880.1 2360818 2360827 10 2360836 2360845 10 8 100 0 20 50 50 50 50 0 2360831 AAAAGGGACG CGTCCCTTTT True TATGATATA GTTTTGTCA True True - AAAAGGGACG CAGGTTAA CGTCCCTTTT TATATCATA 80 RIL182_RS11030 intergenic 2360784 2360868 - down AGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAA CTGATGAGGCAGTAGAGGAAGCATAAGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTTTATATCATAAAATATAATTTTGGAGGATTGAAAAATGGCTATTACAGCAGCTATGGTAA AGATTTGTCATTTGTGACAAAACAAAAGGGACGCAGGTTAACGTCCCTTT 50 TTerm_0961 NZ_LR027880.1 2365712 2365723 12 2365731 2365742 12 7 91 0 19 54 45 54 45 0 2365726 GGTGGGACTTTA TAAAATCCCACC True AAAAATCCG TTTTTATTA True True - GGTGGGATTTTA TAGAATG TAAAGTCCCACC CGGATTTTT 38 RIL182_RS11070 intergenic 2365667 2365749 - down ATAAAAAGGTGGGATTTTATAGAATGTAAAGTCCCACCGGATTTTTACCTGGTGTGCAAAATGAGAGGAGAATCAGCAATTC ATGCACTGGTAGAAGAAAATAATTAATAAAAAGGTGGGATTTTATAGAATGTAAAGTCCCACCGGATTTTTACCTGGTGTGCAAAATGAGAGGAGAATCAGCAATTCATGGGAAATTTAACGTTGGAAGACG ATAAAAAGGTGGGATTTTATAGAATGTAAAGTCCCAC 37 TTerm_0962 NZ_LR027880.1 2382669 2382676 8 2382681 2382688 8 4 87 0 11 56 43 57 42 0 2382678 AAATCCCA TGGGACTT True AGATTATAA ATTCTTCTC True False - AAGTCCCA CGGA TGGGATTT TTATAATCT 54 RIL182_RS11160 intergenic 2382632 2382687 - down AGTCCCACGGATGGGATTTTATAATCTGAAAAATCAAGGATGGTAGGTGGAAAAA CAAATGGCCTTTTAAGAGAAGAATAAGTCCCACGGATGGGATTTTATAATCTGAAAAATCAAGGATGGTAGGTGGAAAAAGTGGATATAGCATCAATAGTAGGTA AGTCCCACGGATGGGATT 18 TTerm_0963 NZ_LR027880.1 2395071 2395084 14 2395090 2395103 14 5 78 0 13 89 10 100 0 0 2395086 AAAATGAAAATTTT AAGATTTTTATCTT True CATCCCCGA ATCATTCGA True False - AAGATAAAAATCTT CTTGA AAAATTTTCATTTT TCGGGGATG 34 RIL182_RS11230 intergenic 2394828 2395251 - down AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGT AGAAAGAGAATCATAAGAATAGTTAAAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGTATGTTTACAACAAATGTATTTGACT AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTT 180 TTerm_0964 NZ_LR027880.1 2395199 2395219 21 2395228 2395248 21 8 85 0 27 69 30 72 27 0 2395223 CAAAAAGGAATCCGCTATGTT AACATAACAAATTCCTTTTTG True GTACGACTC TTTTAACTA True True - CAAAAAGGAATTTGTTATGTT ATTTGTTA AACATAGCGGATTCCTTTTTG GAGTCGTAC 62 RIL182_RS11230 intergenic 2394828 2395251 - down AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGT AGAAAGAGAATCATAAGAATAGTTAAAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTTGAGTCGTACACCTGAAAGTGGAAAGAATACAGATGAATGCCATTCGTTGTATGAAACCTGCTGTTTCATATCCCTAAATTTGAAAAATCGAATGATAAGATAAAAATCTTCTTGAAAAATTTTCATTTTCGGGGATGTTTTTGCGGAAACGCTGGTGTTTCATCTGAAGAAGATGCGCGCAAAAACGCGGAAAATGTCGAAAAAGAGAGAAATATGAAAGATAAGGACAAATTGTAGTACACCAAATCATAAAATAATACAAAATACGGGAAAAAACTACGAAAAAAAAATAAAAAACTCTTGTGTTTTTTTGAGATATTTTATAATAAAATAGAATAATATAGAAAATAGTGCATGAAAGGAGCAACAGTATGTTTACAACAAATGTATTTGACT AAACAAAAAGGAATTTGTTATGTTATTTGTTAAACATAGCGGATTCCTTTTT 52 TTerm_0965 NZ_LR027880.1 2409222 2409232 11 2409239 2409249 11 6 90 0 17 40 59 40 60 0 2409235 CAGAGACAGGA TCCTGTCCCTG True ATTGAAAAC CGCTGCCTA True False - CAGGGACAGGA GAAAAA TCCTGTCTCTG GTTTTCAAT 58 RIL182_RS11285 intergenic 2409103 2409292 - down ATGTCGGCAAGGTATCTAATAATAAAATAATAGCTAGGCAGCGCAGGGACAGGAGAAAAATCCTGTCTCTGTTTTCAATTTGTAAGCTTGTCAGGCAGAAAAAATTGTTATATAATGACGTGTACGGCGTTTGAAAATCTTTTCCGGATTTATAAAACGGAAAATGAGAATACAGGAGGAAAACAAACA AAACTGCAATATTTACCAAAATATAATGTCGGCAAGGTATCTAATAATAAAATAATAGCTAGGCAGCGCAGGGACAGGAGAAAAATCCTGTCTCTGTTTTCAATTTGTAAGCTTGTCAGGCAGAAAAAATTGTTATATAATGACGTGTACGGCGTTTGAAAATCTTTTCCGGATTTATAAAACGGAAAATGAGAATACAGGAGGAAAACAAACAATGAGCAAAGTAAGAACAAGATTTG ATGTCGGCAAGGTATCTAATAATAAAATAATAGCTAGGCAGCGCAGGGACAGGAGAAAAATCCTGTCTCT 70 TTerm_0966 NZ_LR027880.1 2413352 2413358 7 2413365 2413371 7 6 100 0 14 14 85 14 85 0 2413361 CCCAGCC GGCTGGG True TGAAAAGGC TTTAAAATA True False - CCCAGCC TCTCCG GGCTGGG GCCTTTTCA 68 RIL182_RS11305 intergenic 2413325 2413392 + down GGATGGAGATGTTGGATATGAAAAGGCCCAGCCCGGAGAGGCTGGGTTTAAAATAATTGTTTTTCAT GACAGATATTGGGACGGAGGAATTGGGATGGAGATGTTGGATATGAAAAGGCCCAGCCCGGAGAGGCTGGGTTTAAAATAATTGTTTTTCATTATTCTGGTTTCCAAAAACTATAAT ATGAAAAACAATTATTTTAAACCCAGCCTCTCCGGGCTGG 40 TTerm_0967 NZ_LR027880.1 2413352 2413358 7 2413365 2413371 7 6 100 0 14 14 85 14 85 0 2413361 CCCAGCC GGCTGGG True TGAAAAGGC TTTAAAATA True False - CCCAGCC TCTCCG GGCTGGG GCCTTTTCA 68 RIL182_RS11310 intergenic 2413325 2413392 - down ATGAAAAACAATTATTTTAAACCCAGCCTCTCCGGGCTGGGCCTTTTCATATCCAACATCTCCATCC ATTATAGTTTTTGGAAACCAGAATAATGAAAAACAATTATTTTAAACCCAGCCTCTCCGGGCTGGGCCTTTTCATATCCAACATCTCCATCCCAATTCCTCCGTCCCAATATCTGTC ATGAAAAACAATTATTTTAAACCCAGCCTCTCCGGGCTGG 40 TTerm_0968 NZ_LR027880.1 2429510 2429520 11 2429528 2429538 11 7 81 0 12 36 63 33 66 0 2429523 AAAGCACGCCC GGACGTGCCTT True CAAAGAAAA AACAACATC True False - AAGGCACGTCC TGTTTTT GGGCGTGCTTT TTTTCTTTG 56 RIL182_RS11395 intergenic 2429415 2429807 - down GAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTGCTTTTTGTGCGCTTAAAAAATGGCACAAATCTATTCCATACTCATGATAAAATAATATTAACAAATAAATAAGCACCGGACGGAACGTAGGAAGCCGTCCGCTACCCTAGAAAAATTATAGGATGTTGTTAAGGCACGTCCTGTTTTTGGGCGTGCTTTTTTCTTTGTATTTTGCCAGCTATGGATCAAATAGCAACTCATTCGTGCCGGGCTGACCGGATTAAAAACTTTTAAGAAAGAGAGGAACTTGTAA TCAGAGAGGGCAGACTTGATATTTAGAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTGCTTTTTGTGCGCTTAAAAAATGGCACAAATCTATTCCATACTCATGATAAAATAATATTAACAAATAAATAAGCACCGGACGGAACGTAGGAAGCCGTCCGCTACCCTAGAAAAATTATAGGATGTTGTTAAGGCACGTCCTGTTTTTGGGCGTGCTTTTTTCTTTGTATTTTGCCAGCTATGGATCAAATAGCAACTCATTCGTGCCGGGCTGACCGGATTAAAAACTTTTAAGAAAGAGAGGAACTTGTAAATGAATATTATCGACAAACTGAAAT GAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTGCTTTTTGTGCGCTTAAAAAATGGCACAAATCTATTCCATACTCATGATAAAATAATATTAACAAATAAATAAGCACCGGACGGAACGTAGGAAGCCGTCCGCTACCCTAGAAAAATTATAGGATGTTGTTAAGGCACGTCCTGTTTTTGGGCGTGCTT 297 TTerm_0969 NZ_LR027880.1 2429668 2429673 6 2429682 2429687 6 8 100 0 12 33 66 33 66 0 2429677 GCACCT AGGTGC True CACAAAAAG CATGTGCTG True False - GCACCT TGAAATAC AGGTGC CTTTTTGTG 56 RIL182_RS11395 intergenic 2429415 2429807 - down GAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTGCTTTTTGTGCGCTTAAAAAATGGCACAAATCTATTCCATACTCATGATAAAATAATATTAACAAATAAATAAGCACCGGACGGAACGTAGGAAGCCGTCCGCTACCCTAGAAAAATTATAGGATGTTGTTAAGGCACGTCCTGTTTTTGGGCGTGCTTTTTTCTTTGTATTTTGCCAGCTATGGATCAAATAGCAACTCATTCGTGCCGGGCTGACCGGATTAAAAACTTTTAAGAAAGAGAGGAACTTGTAA TCAGAGAGGGCAGACTTGATATTTAGAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTGCTTTTTGTGCGCTTAAAAAATGGCACAAATCTATTCCATACTCATGATAAAATAATATTAACAAATAAATAAGCACCGGACGGAACGTAGGAAGCCGTCCGCTACCCTAGAAAAATTATAGGATGTTGTTAAGGCACGTCCTGTTTTTGGGCGTGCTTTTTTCTTTGTATTTTGCCAGCTATGGATCAAATAGCAACTCATTCGTGCCGGGCTGACCGGATTAAAAACTTTTAAGAAAGAGAGGAACTTGTAAATGAATATTATCGACAAACTGAAAT GAAGCAATATATCATTCTTTTATTTTGGCACAAATTATATCCCAATATGAGTTATTATAATATTGCCAGATGGGTTTCACCTATTCATTCTGAGCCTCCTTTCATGTAATACAGCACATGGCACCTTGAAATACAGGTG 139 TTerm_0970 NZ_LR027880.1 2436228 2436241 14 2436247 2436260 14 5 85 0 18 60 39 58 41 0 2436243 AAAAAGGACGTACC GGTACATCCTTATT True GGCAATAAA GTCGCAAGT True False - AATAAGGATGTACC ATAAC GGTACGTCCTTTTT TTTATTGCC 60 RIL182_RS11425 intergenic 2436201 2436393 - down GCTTAAATAAAAGCGGCGTCAACCAACGCATGGTTTCCGAGTGATCGGGGTGTTTCTTGTTAGCAAGCGTAGTATACTCTGGTGATTACGCCTTGATAGAGGAGAGTTCGGTTCGACTCCGAACACTTGCGACAATAAGGATGTACCATAACGGTACGTCCTTTTTTTATTGCCATGAAAGGAGATGATCGG ACAATCATATAAACAAGAAACAGTAGCTTAAATAAAAGCGGCGTCAACCAACGCATGGTTTCCGAGTGATCGGGGTGTTTCTTGTTAGCAAGCGTAGTATACTCTGGTGATTACGCCTTGATAGAGGAGAGTTCGGTTCGACTCCGAACACTTGCGACAATAAGGATGTACCATAACGGTACGTCCTTTTTTTATTGCCATGAAAGGAGATGATCGGTTGGCAGCAAAGAAAAATCCATTAG GCTTAAATAAAAGCGGCGTCAACCAACGCATGGTTTCCGAGTGATCGGGGTGTTTCTTGTTAGCAAGCGTAGTATACTCTGGTGATTACGCCTTGATAGAGGAGAGTTCGGTTCGACTCCGAACACTTGCGACAATAAGGATGTACCATAACGGTACGTCCTTTT 165 TTerm_0971 NZ_LR027880.1 2437774 2437781 8 2437790 2437797 8 8 100 0 16 50 50 50 50 0 2437785 AAGAGAGG CCTCTCTT True CATAATAAA CCCCATACA True False - AAGAGAGG AATAACAG CCTCTCTT TTTATTATG 64 RIL182_RS11440 intergenic 2437698 2437785 - down ACAGCCTCTCTTTTATTATGCCCTAAAGTTGGCACAAATCCATGCTTGACCTGTCTTATAATTATGATATGAGGAAAGGACTATGCC TGATTGTATGGGGAAGAGAGGAATAACAGCCTCTCTTTTATTATGCCCTAAAGTTGGCACAAATCCATGCTTGACCTGTCTTATAATTATGATATGAGGAAAGGACTATGCCATGTATAAAACACAGAGAAATTACG ACAGCCTCTCT 11 TTerm_0972 NZ_LR027880.1 2446086 2446091 6 2446099 2446104 6 7 100 0 12 100 0 100 0 0 2446094 TTTTTA TAAAAA True AAAAAAAAT GTGAAAATC True False - TTTTTA TATAGTT TAAAAA ATTTTTTTT 24 RIL182_RS11520 intergenic 2445899 2446158 - down GAATAAATTACAGATGTGAGGTAGCAAGTAACACAGGTAACATGCGATTTTCACTTTTTATATAGTTTAAAAATTTTTTTTACATGAAAAAATTGAGATAAAAAAATAATTTCTACGCGTAAAAAGATTGTTGTTACTTTGTTACCTTGTTACCAATCTCTGCAAGTATTGATTTTACTGAATTTGTTAGTAACAAAAGGTATCACAAGTTTACAAAAAGGATGTGATTTCTATTTTAAATAATGCACAACGTGAATGG AGCAGGAAGAGCTGCCATTTAAGTAGAATAAATTACAGATGTGAGGTAGCAAGTAACACAGGTAACATGCGATTTTCACTTTTTATATAGTTTAAAAATTTTTTTTACATGAAAAAATTGAGATAAAAAAATAATTTCTACGCGTAAAAAGATTGTTGTTACTTTGTTACCTTGTTACCAATCTCTGCAAGTATTGATTTTACTGAATTTGTTAGTAACAAAAGGTATCACAAGTTTACAAAAAGGATGTGATTTCTATTTTAAATAATGCACAACGTGAATGGTTGAATAAAAAGAAAGATTTTATCG GAATAAATTACAGATGTGAGGTAGCAAGTAACACAGGTAACATGCGATTTTCACTTTTTATATAGTTTAAAA 72 TTerm_0973 NZ_LR027880.1 2484337 2484355 19 2484361 2484378 18 5 94 5 26 56 43 55 44 0 2484357 ATACTGCGTACAATATGCC GGCATTTGTACGCAGTAT True TGAATAAAA CCATATATT True False - ATACTGCGTACAAATGCC GGAGG GGCATATTGTACGCAGTAT TTTTATTCA 76 RIL182_RS22170 intergenic 2484270 2484455 + down ACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACATTTTGCATTCTATTAGCATGAATAAAATACTGCGTACAATATGCCCCTCCGGCATTTGTACGCAGTATCCATATATTTCTCATCATACCACAACTTATTCAAATCAAACATTACACAGGCAGACCTGACACACCGGACAGAAACT ATTTGATCTGGGATGTGGCAAATAGACTGCATGTTCTGCAAGCCGGCTTGTTGTCACAAACAACATTTTGCATTCTATTAGCATGAATAAAATACTGCGTACAATATGCCCCTCCGGCATTTGTACGCAGTATCCATATATTTCTCATCATACCACAACTTATTCAAATCAAACATTACACAGGCAGACCTGACACACCGGACAGAAACTTACATCGTTTCCATCAACCGGTCAA AGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTA 118 TTerm_0974 NZ_LR027880.1 2484337 2484355 19 2484361 2484378 18 5 94 5 26 56 43 55 44 0 2484357 ATACTGCGTACAATATGCC GGCATTTGTACGCAGTAT True TGAATAAAA CCATATATT True False - ATACTGCGTACAAATGCC GGAGG GGCATATTGTACGCAGTAT TTTTATTCA 76 RIL182_RS11750 intergenic 2484270 2484455 - down AGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTATTTTATTCATGCTAATAGAATGCAAAATGTTGTTTGTGACAACAAGCCGGCTTGCAGAACATGCAGT TTGACCGGTTGATGGAAACGATGTAAGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTATTTTATTCATGCTAATAGAATGCAAAATGTTGTTTGTGACAACAAGCCGGCTTGCAGAACATGCAGTCTATTTGCCACATCCCAGATCAAAT AGTTTCTGTCCGGTGTGTCAGGTCTGCCTGTGTAATGTTTGATTTGAATAAGTTGTGGTATGATGAGAAATATATGGATACTGCGTACAAATGCCGGAGGGGCATATTGTACGCAGTA 118 TTerm_0975 NZ_LR027880.1 2502058 2502071 14 2502078 2502091 14 6 85 0 18 35 64 33 66 0 2502074 CGCCCCGGTATTAC GTAACACCGGAGCG True AATAAAAAC CTCTCCTGC True False - CGCTCCGGTGTTAC TTGGAT GTAATACCGGGGCG GTTTTTATT 52 RIL182_RS11815 intergenic 2501877 2502117 - down GAAAACAGAACAGACAGGCAGGAGAGCGCTCCGGTGTTACTTGGATGTAATACCGGGGCGTTTTTATTGTATAGAGGCTTATTGTACGGATGAAAACATTGTATTAGAAAGCAGCACAAATGGAAATAAAAATAGTTGAAAACAGGTTTACAAGGCATGAAAAAAAGAATAAAATAAACCGGATAAAAAGAAAACGGGAAAAATGAATTTGATATTTCAGGATCTAAATGGAGGCTTACA AGAGTATGCAGAATCTGTTGGATTAGAAAACAGAACAGACAGGCAGGAGAGCGCTCCGGTGTTACTTGGATGTAATACCGGGGCGTTTTTATTGTATAGAGGCTTATTGTACGGATGAAAACATTGTATTAGAAAGCAGCACAAATGGAAATAAAAATAGTTGAAAACAGGTTTACAAGGCATGAAAAAAAGAATAAAATAAACCGGATAAAAAGAAAACGGGAAAAATGAATTTGATATTTCAGGATCTAAATGGAGGCTTACAATGGAAAAGCAAAATGATCATAAAA GAAAACAGAACAGACAGGCAGGAGAGCGCTCCGGTGTTACTTGGATGTAATACCGGGGC 59 TTerm_0976 NZ_LR027880.1 2508736 2508751 16 2508759 2508774 16 7 93 0 27 71 28 73 26 0 2508754 ATAAAAATGAGACCAC GTAGTCTCATTTTTAT True GGCAAAAAA ATAATAAAG True True - ATAAAAATGAGACTAC TGTACAG GTGGTCTCATTTTTAT TTTTTTGCC 78 RIL182_RS11845 intergenic 2508662 2508824 - down ACAGATTCTGGTTAAGAAATTCTGGTTAATCAGAAAAATTACTTTATTATATAAAAATGAGACTACTGTACAGGTGGTCTCATTTTTATTTTTTGCCCGCCGTATCAGTGCACAATGACTGTGAGAAAGGAAAAAAATTTGTTATAATTATAAATTATAAAA TTGCACTTGGCAGTGTAAAGGGTTAACAGATTCTGGTTAAGAAATTCTGGTTAATCAGAAAAATTACTTTATTATATAAAAATGAGACTACTGTACAGGTGGTCTCATTTTTATTTTTTGCCCGCCGTATCAGTGCACAATGACTGTGAGAAAGGAAAAAAATTTGTTATAATTATAAATTATAAAAATGCTTAATGATCAGGATATCAGGA ACAGATTCTGGTTAAGAAATTCTGGTTAATCAGAAAAATTACTTTATTATATAAAAATGAGACTACTGTACAGGTGGTCTCATTTTTA 88 TTerm_0977 NZ_LR027880.1 2513176 2513187 12 2513193 2513204 12 5 100 0 24 58 41 58 41 0 2513189 AAGCAGCATACA TGTATGCTGCTT True TCTAAAAAA CTCTCACCC True False - AAGCAGCATACA GATTT TGTATGCTGCTT TTTTTTAGA 64 RIL182_RS11860 intergenic 2513158 2513233 + down TGCATGTTTTCTAAAAAAAGCAGCATACAAAATCTGTATGCTGCTTCTCTCACCCTATCAGTCATTTTTACATGT TAAATATTATAAATCCATGTGGTAATGCATGTTTTCTAAAAAAAGCAGCATACAAAATCTGTATGCTGCTTCTCTCACCCTATCAGTCATTTTTACATGTTACTCTTGAAAAAACACATCAATTC ACATGTAAAAATGACTGATAGGGTGAGAGAAGCAGCATACAGATTTTGTATGCTGCT 57 TTerm_0978 NZ_LR027880.1 2513176 2513187 12 2513193 2513204 12 5 100 0 24 58 41 58 41 0 2513189 AAGCAGCATACA TGTATGCTGCTT True TCTAAAAAA CTCTCACCC True False - AAGCAGCATACA GATTT TGTATGCTGCTT TTTTTTAGA 64 RIL182_RS11865 intergenic 2513158 2513233 - down ACATGTAAAAATGACTGATAGGGTGAGAGAAGCAGCATACAGATTTTGTATGCTGCTTTTTTTAGAAAACATGCA GAATTGATGTGTTTTTTCAAGAGTAACATGTAAAAATGACTGATAGGGTGAGAGAAGCAGCATACAGATTTTGTATGCTGCTTTTTTTAGAAAACATGCATTACCACATGGATTTATAATATTTA ACATGTAAAAATGACTGATAGGGTGAGAGAAGCAGCATACAGATTTTGTATGCTGCT 57 TTerm_0979 NZ_LR027880.1 2518537 2518543 7 2518553 2518559 7 9 100 0 14 85 14 85 14 0 2518547 AATTTTC GAAAATT True GTCAAAAAA ACCGGATAT True False - AATTTTC TGATATATT GAAAATT TTTTTTGAC 36 RIL182_RS11875 intergenic 2518387 2518679 - down ACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGT AAGGGCTGTTTGGATTTATGAAATAACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGTATGAAATACGGATATTTTGATGAAA ACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAAT 142 TTerm_0980 NZ_LR027880.1 2518610 2518623 14 2518633 2518646 14 9 92 0 23 53 46 53 46 0 2518627 AAAACGCAGGAATC GATTCCCGCGTTTT True TCTTATAAA CCATTTTTC True True - AAAACGCGGGAATC TGCAGAGAG GATTCCTGCGTTTT TTTATAAGA 70 RIL182_RS11875 intergenic 2518387 2518679 - down ACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGT AAGGGCTGTTTGGATTTATGAAATAACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTTTTTATAAGAAATTACGTCTTATAAATTAAAAAGCACACAAAAATATCCGGTAATTTTCTGATATATTGAAAATTTTTTTGACCATAGTATATCTGCAAAGGACAGGTCATGAATCTGTTATTTTAAGGACATATTTTGTATAACTATTTTCAGATAACCTTTATAGTTAAGGTATCATAGCAATAGAAAGCAGGAATGAAATAGTATAATTATGGAGGGCAGTATGAAATACGGATATTTTGATGAAA ACAGAAGAAAACAGCCATTGCATAGAAAAATGGAAAACGCGGGAATCTGCAGAGAGGATTCCTGCGTTT 69 TTerm_0981 NZ_LR027880.1 2550884 2550897 14 2550906 2550919 14 8 92 0 23 60 39 61 38 0 2550901 GAGTATCATTCCAC GTGAAATGATACTC True TAACAAAAG CCCCTCTTA True False - GAGTATCATTTCAC AGATCACA GTGGAATGATACTC CTTTTGTTA 62 RIL182_RS12010 intergenic 2550471 2550926 + down GAGGTCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTACTAATTTATGGTTGACTTTTCATAGCTGGTCTCCAAACATTACTGATTTTTTGTCTGTCAACAATCAATCAGAACTTTCCATATTTCTGTATTTCCATACGTTTTATAGTGTAGCGTTTCTTCTGCAATTTTTCAAACATTTTATGCATAATCATGCAATATTATAAAAGAGTATTACTGTTCACTCGTACCTCGTTCCAGTAACGGATTTTACCGATGCTTCGCATTCCAAATCGGCAAAATCTGCTGCCACCACTGTATCATACGGCATTTTCAGTTCAGAAAATGCCTGCCTGTGAACAGTAACAAAAGAGTATCATTCCACTGTGATCTGTGAAATGATACTCCCCCTCT CAATGTCGAATTTAACCTCAAATAAGAGGTCTGTATACCAATATCGATAGATTTTGAAAAAGCACCCTAAGGGAGCTCTATTAAAGTTACCCTTTTTTACCACCGATATGAAAAAGAAATTTTTTACTAATTTATGGTTGACTTTTCATAGCTGGTCTCCAAACATTACTGATTTTTTGTCTGTCAACAATCAATCAGAACTTTCCATATTTCTGTATTTCCATACGTTTTATAGTGTAGCGTTTCTTCTGCAATTTTTCAAACATTTTATGCATAATCATGCAATATTATAAAAGAGTATTACTGTTCACTCGTACCTCGTTCCAGTAACGGATTTTACCGATGCTTCGCATTCCAAATCGGCAAAATCTGCTGCCACCACTGTATCATACGGCATTTTCAGTTCAGAAAATGCCTGCCTGTGAACAGTAACAAAAGAGTATCATTCCACTGTGATCTGTGAAATGATACTCCCCCTCTTACATTGCCACTACGTCATCTGCAA AGAGGGGGAGTATCATTTCACAGATCACAGTGGAATGATACT 42 TTerm_0982 NZ_LR027880.1 2550884 2550897 14 2550906 2550919 14 8 92 0 23 60 39 61 38 0 2550901 GAGTATCATTCCAC GTGAAATGATACTC True TAACAAAAG CCCCTCTTA True False - GAGTATCATTTCAC AGATCACA GTGGAATGATACTC CTTTTGTTA 62 RIL182_RS12015 intergenic 2550471 2550926 - down AGAGGGGGAGTATCATTTCACAGATCACAGTGGAATGATACTCTTTTGTTACTGTTCACAGGCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGTAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAATACTCTTTTATAATATTGCATGATTATGCATAAAATGTTTGAAAAATTGCAGAAGAAACGCTACACTATAAAACGTATGGAAATACAGAAATATGGAAAGTTCTGATTGATTGTTGACAGACAAAAAATCAGTAATGTTTGGAGACCAGCTATGAAAAGTCAACCATAAATTAGTAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGACCTC TTGCAGATGACGTAGTGGCAATGTAAGAGGGGGAGTATCATTTCACAGATCACAGTGGAATGATACTCTTTTGTTACTGTTCACAGGCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGCAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGTAAAATCCGTTACTGGAACGAGGTACGAGTGAACAGTAATACTCTTTTATAATATTGCATGATTATGCATAAAATGTTTGAAAAATTGCAGAAGAAACGCTACACTATAAAACGTATGGAAATACAGAAATATGGAAAGTTCTGATTGATTGTTGACAGACAAAAAATCAGTAATGTTTGGAGACCAGCTATGAAAAGTCAACCATAAATTAGTAAAAAATTTCTTTTTCATATCGGTGGTAAAAAAGGGTAACTTTAATAGAGCTCCCTTAGGGTGCTTTTTCAAAATCTATCGATATTGGTATACAGACCTCTTATTTGAGGTTAAATTCGACATTG AGAGGGGGAGTATCATTTCACAGATCACAGTGGAATGATACT 42 TTerm_0983 NZ_LR027880.1 2554988 2555003 16 2555009 2555024 16 5 93 0 27 46 53 46 53 0 2555005 GAAAAGACGCAGATCC GGATCTGCGCCTTTTC True ATAAAGTAG ATTTCTAAT True True - GAAAAGGCGCAGATCC GGTAA GGATCTGCGTCTTTTC CTACTTTAT 78 RIL182_RS12030 intergenic 2554819 2555073 - down AAACAAAACAATAGATCAACGCTTTGCGGGCAGATCTATGATTAGAAATGAAAAGGCGCAGATCCGGTAAGGATCTGCGTCTTTTCTACTTTATGGAAACCGTTTTTTCTTGACAAGCACTTATATATTAGGTTAGACTAACGGGGCAAAGTTAGTTCAGCCTAATAGAAAGAAACAACGGATGGGATACTTTGCGGACAGAAATGTTGTCAGGAATAAAAGCAGAGAGGGCAGATTTGAAAAGATAAGCGGAT TTTCACAGTGTGTGAAGACAGTGTAAAACAAAACAATAGATCAACGCTTTGCGGGCAGATCTATGATTAGAAATGAAAAGGCGCAGATCCGGTAAGGATCTGCGTCTTTTCTACTTTATGGAAACCGTTTTTTCTTGACAAGCACTTATATATTAGGTTAGACTAACGGGGCAAAGTTAGTTCAGCCTAATAGAAAGAAACAACGGATGGGATACTTTGCGGACAGAAATGTTGTCAGGAATAAAAGCAGAGAGGGCAGATTTGAAAAGATAAGCGGATATGAAAACAGAAACAAAAAAGATAC AAACAAAACAATAGATCAACGCTTTGCGGGCAGATCTATGATTAGAAATGAAAAGGCGCAGATCCGGTAAGGATCTGCGTCTTTT 85 TTerm_0984 NZ_LR027880.1 2559196 2559201 6 2559208 2559213 6 6 100 0 12 100 0 100 0 0 2559204 AAAAAT ATTTTT True TCCCGAAAA ACTCAATTT True False - AAAAAT AAGCAA ATTTTT TTTTCGGGA 24 RIL182_RS12055 intergenic 2559071 2559394 - down AAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAA ATAAAGAATGTGCTTATCGAAGATAAAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAAATGAGAAAGAGAATATTGGGCGCGG AAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTT 198 TTerm_0985 NZ_LR027880.1 2559304 2559315 12 2559322 2559333 12 6 91 0 19 62 37 63 36 0 2559318 AAAAAACACCCG CGGATGTTTTTT True GGTAAACAA GAAATAATT True True - AAAAAACATCCG AAAAAA CGGGTGTTTTTT TTGTTTACC 70 RIL182_RS12055 intergenic 2559071 2559394 - down AAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAA ATAAAGAATGTGCTTATCGAAGATAAAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTTTTGTTTACCTGGTCAGTTCTACTTTATTCGAACATAATTTCGGATGGATGAATGGCTGATAAAAAACAGGACACATATCAAAAAATTGAGTAAAAATAAGCAAATTTTTTTTCGGGAAAACATGTATAAAAAATTTGACTTTTGGATATAACCTAAGTATGATATGTGCCTGTATCAAATGACGGCATTCGTCATGTTGACATATATGTATCATTCTTGAGGAAAGGAGCAAAATGAGAAAGAGAATATTGGGCGCGG AAAAGATTGTTTTTTATAAAAAACATCCGAAAAACGTAGTAACAAATTTGGCAATTATTTCAAAAAACATCCGAAAAAACGGGTGTTTTT 90 TTerm_0986 NZ_LR027880.1 2573783 2573788 6 2573794 2573799 6 5 100 0 12 66 33 66 33 0 2573790 ACAAAG CTTTGT True CGAACAAAA GTGATTTGA True False - ACAAAG TATCG CTTTGT TTTTGTTCG 40 RIL182_RS12120 intergenic 2573734 2573962 - down AAAAGATTCGGGGGTCAAAAAATTGAAAACCACCTTTTGCCTCCCGAATCTTAAAAATTATTAGCAGGTGCCGTCTGTAACACAAAAAATTGTGTACAGGCGGCACTTTGTGTTATACTCTGAATACGAAAGATGTATCTGAGTTTTTAGAATGTCAAATCACACAAAGTATCGCTTTGTTTTGTTCGAATATCTGAAAATAAAAGAACAGATTATAGAAAGTGAGAT AGCATGGATATCCGGGATATTATTAAAAAGATTCGGGGGTCAAAAAATTGAAAACCACCTTTTGCCTCCCGAATCTTAAAAATTATTAGCAGGTGCCGTCTGTAACACAAAAAATTGTGTACAGGCGGCACTTTGTGTTATACTCTGAATACGAAAGATGTATCTGAGTTTTTAGAATGTCAAATCACACAAAGTATCGCTTTGTTTTGTTCGAATATCTGAAAATAAAAGAACAGATTATAGAAAGTGAGATATGAAGAAATGCAGTACCACGGAGG AAAAGATTCGGGGGTCAAAAAATTGAAAACCACCTTTTGCCTCCCGAATCTTAAAAATTATTAGCAGGTGCCGTCTGTAACACAAAAAATTGTGTACAGGCGGCACTTTGTGTTATACTCTGAATACGAAAGATGTATCTGAGTTTTTAGAATGTCAAATCACACAAAGTATCGCTTTG 179 TTerm_0987 NZ_LR027880.1 2587348 2587363 16 2587372 2587387 16 8 100 0 32 50 50 50 50 0 2587367 AAAGGAGCACAGAGAG CTCTCTGTGCTCCTTT True TCTTTAGAA GATACATCA True False - AAAGGAGCACAGAGAG AATACCTG CTCTCTGTGCTCCTTT TTCTAAAGA 88 RIL182_RS12195 intergenic 2587309 2587402 - down AAAGACTGATGTATCAAAGGAGCACAGAGAGAATACCTGCTCTCTGTGCTCCTTTTCTAAAGATGGCTATTTTTAAAGGAGGAAGATGAGTTT AGCAGATTCTTGATATGGCAAACTAAAAGACTGATGTATCAAAGGAGCACAGAGAGAATACCTGCTCTCTGTGCTCCTTTTCTAAAGATGGCTATTTTTAAAGGAGGAAGATGAGTTTATGCCAAAATTTTTTCAGACCGTTG AAAGACTGATGTATCAAAGGAGCACAGAGAGAATACCTGCTCTCTGTGCTCCTT 54 TTerm_0988 NZ_LR027880.1 2594602 2594607 6 2594614 2594619 6 6 100 0 12 66 33 66 33 0 2594610 TAGATG CATCTA True ACAAAAAAT ACCAGATGA True False - TAGATG CAGGTA CATCTA ATTTTTTGT 40 RIL182_RS21300 intergenic 2594529 2594721 - down AGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCA ATAGAAAAATCTGGAGTGAGAAGTAAGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCAATGGACGAGTCAGGAAGAAAAATCA AGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCT 119 TTerm_0989 NZ_LR027880.1 2594597 2594618 22 2594623 2594644 22 4 86 0 29 72 27 73 26 0 2594620 AAAAATAGATGTACCTGCATCT AGATGATAGTACATCTATTTTT True AGCATACAA GTGTGTCAA True True - AAAAATAGATGTACTATCATCT GGTT AGATGCAGGTACATCTATTTTT TTGTATGCT 74 RIL182_RS21300 intergenic 2594529 2594721 - down AGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCA ATAGAAAAATCTGGAGTGAGAAGTAAGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTTTTGTATGCTAATTGGAAAGTCATAAGTTAGATTTTAATTTTCAGAGTTGGTTAGGAGTGGAGATCGCAATGGACGAGTCAGGAAGAAAAATCA AGAAAGATTTCATTGATGAATCAAATCAGGAAAAAGTTTTTTCCTGAGCAAAGTAAGAAAAAGATAAATTGACACACAAAAATAGATGTACTATCATCTGGTTAGATGCAGGTACATCTATTTT 124 TTerm_0990 NZ_LR027880.1 2629810 2629835 26 2629841 2629867 27 5 88 3 32 49 50 45 54 0 2629837 CATAAAAAGACAGGGCGCGGAAGTCA TGGCTTCCGCGCCCTGTTCTTTTTTTG True ACAGCACCC CCTATCTGA True True - CAAAAAAAGAACAGGGCGCGGAAGCCA GTATA TGACTTCCGCGCCCTGTCTTTTTATG GGGTGCTGT 88 RIL182_RS12375 intergenic 2629691 2629869 + down GCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTGCC AAGACGCGCCCCTGTTACGCAGTAGGCGCGGAAAATCCCTTGATTTACAGGGCTTTCCGGGCGTGAAAATCGGATAGGCGATACTTTATACCTTTACCCCCAAAAATGGCGTTCTACTGCGTAACATTCACGAAAACAGCACCCATAAAAAGACAGGGCGCGGAAGTCATATACTGGCTTCCGCGCCCTGTTCTTTTTTTGCCTATCTGACATTTCCCTTTTCCATTT GGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTAT 59 TTerm_0991 NZ_LR027880.1 2629810 2629835 26 2629841 2629867 27 5 88 3 32 49 50 45 54 0 2629837 CATAAAAAGACAGGGCGCGGAAGTCA TGGCTTCCGCGCCCTGTTCTTTTTTTG True ACAGCACCC CCTATCTGA True True - CAAAAAAAGAACAGGGCGCGGAAGCCA GTATA TGACTTCCGCGCCCTGTCTTTTTATG GGGTGCTGT 88 RIL182_RS12380 intergenic 2629691 2629869 - down GGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTATGGGTGCTGTTTTCGTGAATGTTACGCAGTAGAACGCCATTTTTGGGGGTAAAGGTATAAAGTATCGCCTATCCGATTTTCACGCCCGGAAAGCCCTGTAAATCAAGGGATTTTCCGCGC AAATGGAAAAGGGAAATGTCAGATAGGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTATGGGTGCTGTTTTCGTGAATGTTACGCAGTAGAACGCCATTTTTGGGGGTAAAGGTATAAAGTATCGCCTATCCGATTTTCACGCCCGGAAAGCCCTGTAAATCAAGGGATTTTCCGCGCCTACTGCGTAACAGGGGCGCGTCTT GGCAAAAAAAGAACAGGGCGCGGAAGCCAGTATATGACTTCCGCGCCCTGTCTTTTTAT 59 TTerm_0992 NZ_LR027880.1 2634219 2634226 8 2634235 2634242 8 8 100 0 16 25 75 25 75 0 2634230 GGCGGCTA TAGCCGCC True TTAAAAGCG ATGAAGCAC True False - GGCGGCTA CCTCCTTT TAGCCGCC CGCTTTTAA 64 RIL182_RS12405 intergenic 2633992 2634529 + down TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATG TAAAGCCAAAAAACAACAAAAATAATTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATGTGGAACCTAATCGCAGGGAGTTTAT CATTCTCACCCCCTTTCTCGTTGGAAAGTTGGTGGTGCTTCCCCCTTTTCGCGGGGCAATACTGCCTTTTGAAAAAAACGCCGAAGATTTTCGGATTTTTTTCAAAAAATTTTTTGAGCAGCAAAATACGCCTGTCCGAAAAGCCCGGACAGACGTATAGGTATTGTAAGCGGTATTCAGATGATTAGACAGTTCATATTGATAGACGTAGTTTTCCCCGGCGGTGGTCGGGCTTTTTTTGATGTGTCAATGACCGTCGGATTTTGTCGATATGGTATGTGCTTCATGGCGGCTACCTCCTTTTAGCCGC 310 TTerm_0993 NZ_LR027880.1 2634423 2634440 18 2634445 2634463 19 4 89 5 21 72 27 76 23 0 2634442 TTTTGAAAAAAATCCGAA TTCGGCGTTTTTTTCAAAA True AAAAAATTT GGCAGTATT True True - TTTTGAAAAAAACGCCGAA GATT TTCGGATTTTTTTCAAAA AAATTTTTT 74 RIL182_RS12405 intergenic 2633992 2634529 + down TTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATG TAAAGCCAAAAAACAACAAAAATAATTTAATTAAAAGAGCCAGACGCACAGACGCAGAGCCGATAATATGCAGTTTGAAATACTGCTGTTATCGCCTCTTTTTTGATTTAATTTGTGCCCCCAATAACCATATTGGAGCAAAATCAGAACTGTTGCTTGTCGTTCTTTGATTTCCGCAGCAGCTTTGAAAAACCAAAGCCGCCGTTTCTTTTTATCTTCTAATGAAATGACGCGGTATCACTGTTAAAAGCGGCGGCTAAAAGGAGGTAGCCGCCATGAAGCACATACCATATCGACAAAATCCGACGGTCATTGACACATCAAAAAAAGCCCGACCACCGCCGGGGAAAACTACGTCTATCAATATGAACTGTCTAATCATCTGAATACCGCTTACAATACCTATACGTCTGTCCGGGCTTTTCGGACAGGCGTATTTTGCTGCTCAAAAAATTTTTTGAAAAAAATCCGAAAATCTTCGGCGTTTTTTTCAAAAGGCAGTATTGCCCCGCGAAAAGGGGGAAGCACCACCAACTTTCCAACGAGAAAGGGGGTGAGAATGTGGAACCTAATCGCAGGGAGTTTAT CATTCTCACCCCCTTTCTCGTTGGAAAGTTGGTGGTGCTTCCCCCTTTTCGCGGGGCAATACTGCCTTTTGAAAAAAACGCCGAAGATTTTCGGATTTTTTTCAAA 106 TTerm_0994 NZ_LR027880.1 2642061 2642071 11 2642077 2642087 11 5 90 0 17 40 59 40 60 0 2642073 AAAGCCCGTGG CCACGAGCTTT True ACATGAGAA ATCTCCAGT True False - AAAGCTCGTGG ATCTG CCACGGGCTTT TTCTCATGT 66 RIL182_RS12490 intergenic 2641889 2642150 - down AAGGTGTATGTTACACTAAATAAAAGCAGGGAACTATCTATATCCATGCTTCAAACTGGAGATAAAGCTCGTGGATCTGCCACGGGCTTTTCTCATGTTGTTATATACATTTTGCTGAAATTTTAAATTTCAGTGTAAAAGTAGATTGGTGTTTAGAAGGAATATGCAAAGTATTACACGAAAATGTCAAAGGATTACAGTTTCCTAAAACCCATAATAATTTCTGATATAATGCGATAAGTCAGAAAGGATGATGGGGCT GGGATTTTACACATGTAGCTAAGTAAAGGTGTATGTTACACTAAATAAAAGCAGGGAACTATCTATATCCATGCTTCAAACTGGAGATAAAGCTCGTGGATCTGCCACGGGCTTTTCTCATGTTGTTATATACATTTTGCTGAAATTTTAAATTTCAGTGTAAAAGTAGATTGGTGTTTAGAAGGAATATGCAAAGTATTACACGAAAATGTCAAAGGATTACAGTTTCCTAAAACCCATAATAATTTCTGATATAATGCGATAAGTCAGAAAGGATGATGGGGCTATGGGGAAAAGAGAGCACATATACG AAGGTGTATGTTACACTAAATAAAAGCAGGGAACTATCTATATCCATGCTTCAAACTGGAGATAAAGCTCGTGGATCTGCCACGGGCTT 89 TTerm_0995 NZ_LR027880.1 2643386 2643403 18 2643410 2643427 18 6 94 0 31 69 30 70 29 0 2643406 AATTTAGCAGGCAATAAT ATTATTGCCTGCCAAATT True TTGGTAAAA AATGATGAA True False - AATTTGGCAGGCAATAAT ATTCAA ATTATTGCCTGCTAAATT TTTTACCAA 62 RIL182_RS12500 intergenic 2643034 2643523 - down ATGATACGTTATATTGCAAGAGTGTGTATGCTTGGACTCCGATAGGAGAAAGCAGATTGGTTCTGATTGACAGAAGAATCATATGATTTCATCATTAATTTGGCAGGCAATAATATTCAAATTATTGCCTGCTAAATTTTTACCAAAATTCTTCTAATACCGTTTTTAGACTAGGAAATATTGTTGAAAGCGTACTCTCAATATATTCTTTAGAGCAGAACTGTAGCTTTGAAATAGTATCAATGCTGTGTTTTTTACTTGATTTCTGAGTAATTTTTGTTCTGTTGGTCATTTTCTGCAAAAACAGGTCACTTTCTGCATAGGATATTTTCTTTTGCTTTGATTCCTGCTATTCTTAGAATATACAACAGATTGCTCTATATGGCACATTGAATACTGAGGAAAGGAGAAGTAAATATAATTATGAATATGCTTATAGAATGATCTGCATATAACGACAAAATGATATTAAAATAGGGGGTGATTTTG TACAGAAAGCACAGGCTCGGAGCTGATGATACGTTATATTGCAAGAGTGTGTATGCTTGGACTCCGATAGGAGAAAGCAGATTGGTTCTGATTGACAGAAGAATCATATGATTTCATCATTAATTTGGCAGGCAATAATATTCAAATTATTGCCTGCTAAATTTTTACCAAAATTCTTCTAATACCGTTTTTAGACTAGGAAATATTGTTGAAAGCGTACTCTCAATATATTCTTTAGAGCAGAACTGTAGCTTTGAAATAGTATCAATGCTGTGTTTTTTACTTGATTTCTGAGTAATTTTTGTTCTGTTGGTCATTTTCTGCAAAAACAGGTCACTTTCTGCATAGGATATTTTCTTTTGCTTTGATTCCTGCTATTCTTAGAATATACAACAGATTGCTCTATATGGCACATTGAATACTGAGGAAAGGAGAAGTAAATATAATTATGAATATGCTTATAGAATGATCTGCATATAACGACAAAATGATATTAAAATAGGGGGTGATTTTGATGAAAGATTTTCATTTGAAGATTT ATGATACGTTATATTGCAAGAGTGTGTATGCTTGGACTCCGATAGGAGAAAGCAGATTGGTTCTGATTGACAGAAGAATCATATGATTTCATCATTAATTTGGCAGGCAATAATATTCAAATTATTGCCTGCTAAAT 137 TTerm_0996 NZ_LR027880.1 2652616 2652629 14 2652637 2652650 14 7 92 0 23 60 39 61 38 0 2652632 AAAAACGAATGGCA TGCCATTCGTCTTT True TTTATTAAA ATCTGCTTT True False - AAAGACGAATGGCA TCAGGTG TGCCATTCGTTTTT TTTAATAAA 70 RIL182_RS12565 intergenic 2652525 2652714 - down ATGGATATGATAAATAGCCAAAAGCTGTCCGCTAATAGAATTTACAACAGAATATAAAGCAGATAAAGACGAATGGCATCAGGTGTGCCATTCGTTTTTTTAATAAAAGCACAAATTAACCTACTCACGAGCATAAAATGATGTGCATTGGGTTGTTTTCTGGACTATGAGAATCAAAGTCCCATTGAT ATGTCAGAGTAAAAGAAATGCAGTGATGGATATGATAAATAGCCAAAAGCTGTCCGCTAATAGAATTTACAACAGAATATAAAGCAGATAAAGACGAATGGCATCAGGTGTGCCATTCGTTTTTTTAATAAAAGCACAAATTAACCTACTCACGAGCATAAAATGATGTGCATTGGGTTGTTTTCTGGACTATGAGAATCAAAGTCCCATTGATATGATTAACATGGAAAAGAGGTGCA ATGGATATGATAAATAGCCAAAAGCTGTCCGCTAATAGAATTTACAACAGAATATAAAGCAGATAAAGACGAATGGCATCAGGTGTGCCATTCGTTTT 98 TTerm_0997 NZ_LR027880.1 2663307 2663314 8 2663322 2663329 8 7 100 0 16 75 25 75 25 0 2663317 AGAAAAAG CTTTTTCT True AAAAATTTA GTGTCTGTC True False - AGAAAAAG GGACAAT CTTTTTCT TAAATTTTT 40 RIL182_RS12625 intergenic 2663299 2663583 + down AAAATTTAGAAAAAGATTGTCCCTTTTTCTGTGTCTGTCCGTTATACAAGTAAATCCACAAAACAGGAGGTGAAATAAGCGATGGCAACGGTAAATACTTTATGGGAGCATTTGTGTGGGTCTGCTTATTTCTCTTGCCCACTATGGAGGCTGCGACTTAAAATCAGCAGGACAAGCGCATAGCTTATATAGTCGATGTTTAGGTTATGCGCTGCCGATGGTTTTATCTACTAATTTTCCATGCTCTCAATGGGCATTGATACCAAACGAAAGGAGTTAATCTA AACTTCTACCGAACGCACCGTCTAAAAAATTTAGAAAAAGATTGTCCCTTTTTCTGTGTCTGTCCGTTATACAAGTAAATCCACAAAACAGGAGGTGAAATAAGCGATGGCAACGGTAAATACTTTATGGGAGCATTTGTGTGGGTCTGCTTATTTCTCTTGCCCACTATGGAGGCTGCGACTTAAAATCAGCAGGACAAGCGCATAGCTTATATAGTCGATGTTTAGGTTATGCGCTGCCGATGGTTTTATCTACTAATTTTCCATGCTCTCAATGGGCATTGATACCAAACGAAAGGAGTTAATCTATGAAAAAAGCATTATGTGTCCTGTT TAGATTAACTCCTTTCGTTTGGTATCAATGCCCATTGAGAGCATGGAAAATTAGTAGATAAAACCATCGGCAGCGCATAACCTAAACATCGACTATATAAGCTATGCGCTTGTCCTGCTGATTTTAAGTCGCAGCCTCCATAGTGGGCAAGAGAAATAAGCAGACCCACACAAATGCTCCCATAAAGTATTTACCGTTGCCATCGCTTATTTCACCTCCTGTTTTGTGGATTTACTTGTATAACGGACAGACACAGAAAAAGGGACAATCTTTTTC 276 TTerm_0998 NZ_LR027880.1 2664478 2664492 15 2664497 2664511 15 4 93 0 25 36 63 35 64 0 2664494 ACGCCCGTATCAGCA TGCCGATACGGGCGT True AAAAGGCTA TTTTAAAAA True True - ACGCCCGTATCGGCA TTAC TGCTGATACGGGCGT TAGCCTTTT 82 RIL182_RS12635 intergenic 2664439 2664545 + down CCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGTTTTTAAAAAGGTGAATTTTTATAATATTACTCAT GATTCTCAGAGAGGATAGTATCTGACCTCAAATTTGTAATCTTCCCTCTGGCAGAAAAAGGCTACGCCCGTATCAGCAGTAATGCCGATACGGGCGTTTTTAAAAAGGTGAATTTTTATAATATTACTCATCATTTGAGCAAATAAAGCAAATCGC ATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCG 67 TTerm_0999 NZ_LR027880.1 2664478 2664492 15 2664497 2664511 15 4 93 0 25 36 63 35 64 0 2664494 ACGCCCGTATCAGCA TGCCGATACGGGCGT True AAAAGGCTA TTTTAAAAA True True - ACGCCCGTATCGGCA TTAC TGCTGATACGGGCGT TAGCCTTTT 82 RIL182_RS22060 intergenic 2664439 2664545 - down ATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCGTAGCCTTTTTCTGCCAGAGGGAAGATTACAAATTTGAGG GCGATTTGCTTTATTTGCTCAAATGATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCGTAGCCTTTTTCTGCCAGAGGGAAGATTACAAATTTGAGGTCAGATACTATCCTCTCTGAGAATC ATGAGTAATATTATAAAAATTCACCTTTTTAAAAACGCCCGTATCGGCATTACTGCTGATACGGGCG 67 TTerm_1000 NZ_LR027880.1 2669294 2669303 10 2669311 2669320 10 7 80 0 10 90 10 100 0 0 2669306 AAATGTTTAT ATAAGAATTT True GATAAACAA CTGACTATA True False - AAATTCTTAT ACAGCGG ATAAACATTT TTGTTTATC 28 RIL182_RS12665 intergenic 2669184 2669381 + down ACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAAATGACATTGGGATTTTACTCCCACGCCCCTAAACT AAGCTTTCTATATAGAGCAGCTTAAACAAATATTAGTATATACCATTTTTAAGGCAGATGAAAGCATCTGTCTGTTTGTTGTGCAAATTTATTATGTTAAAAGTGTTATAAGATAGAAATACAGCAGATAAACAAAATGTTTATCCGCTGTATAAGAATTTCTGACTATAAAGCAATCCTTATCTAAATGACATTGGGATTTTACTCCCACGCCCCTAAACTTATCTGGCTTTATCTTCTCTGACTT AGTTTAGGGGCGTGGGAGTAAAATCCCAATGTCATTTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATT 87 TTerm_1001 NZ_LR027880.1 2669294 2669303 10 2669311 2669320 10 7 80 0 10 90 10 100 0 0 2669306 AAATGTTTAT ATAAGAATTT True GATAAACAA CTGACTATA True False - AAATTCTTAT ACAGCGG ATAAACATTT TTGTTTATC 28 RIL182_RS12670 intergenic 2669184 2669381 - down AGTTTAGGGGCGTGGGAGTAAAATCCCAATGTCATTTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATTTTGTTTATCTGCTGTATTTCTATCTTATAACACTTTTAACATAATAAATTTGCACAACAAACAGACAGATGCTTTCATCTGCCTTAAAAATGGTATATACTAATATTTGT AAGTCAGAGAAGATAAAGCCAGATAAGTTTAGGGGCGTGGGAGTAAAATCCCAATGTCATTTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATTTTGTTTATCTGCTGTATTTCTATCTTATAACACTTTTAACATAATAAATTTGCACAACAAACAGACAGATGCTTTCATCTGCCTTAAAAATGGTATATACTAATATTTGTTTAAGCTGCTCTATATAGAAAGCTT AGTTTAGGGGCGTGGGAGTAAAATCCCAATGTCATTTAGATAAGGATTGCTTTATAGTCAGAAATTCTTATACAGCGGATAAACATT 87 TTerm_1002 NZ_LR027880.1 2720792 2720797 6 2720804 2720809 6 6 100 0 12 66 33 66 33 0 2720800 TTTGCT AGCAAA True TAAAAATTT GCTGCACAT True False - TTTGCT GTGTAT AGCAAA AAATTTTTA 40 RIL182_RS12955 intergenic 2720765 2721012 - down GGAACTATTGCTAAAGAGTGGAAAAAGGTAACAAAAAATTGTTTCCAATAAAAAATTATCGTTGTGTTGGAACAAACATACTTGTATAGACGAGAAGTTTTGAAATCGCTTTACAGGAGGGGCATAATACTTGGTTGTGTTATGTTAGAGACAGATAGGGTTTACATTAGTTACATGGCAATAGCTGTTATATTATGTGCAGCTTTGCTGTGTATAGCAAAAATTTTTAAACAGGAGGTGAGAGAGA AATGCAAATTAGAAAAAATATGGTAGGAACTATTGCTAAAGAGTGGAAAAAGGTAACAAAAAATTGTTTCCAATAAAAAATTATCGTTGTGTTGGAACAAACATACTTGTATAGACGAGAAGTTTTGAAATCGCTTTACAGGAGGGGCATAATACTTGGTTGTGTTATGTTAGAGACAGATAGGGTTTACATTAGTTACATGGCAATAGCTGTTATATTATGTGCAGCTTTGCTGTGTATAGCAAAAATTTTTAAACAGGAGGTGAGAGAGAATGAAGCAGGTTAATAAGAAAGTGT GGAACTATTGCTAAAGAGTGGAAAAAGGTAACAAAAAATTGTTTCCAATAAAAAATTATCGTTGTGTTGGAACAAACATACTTGTATAGACGAGAAGTTTTGAAATCGCTTTACAGGAGGGGCATAATACTTGGTTGTGTTATGTTAGAGACAGATAGGGTTTACATTAGTTACATGGCAATAGCTGTTATATTATGTGCAGCTTTGCTGTGTATAGCAA 220 TTerm_1003 NZ_LR027880.1 2723501 2723513 13 2723522 2723534 13 8 84 0 16 53 46 54 45 0 2723517 ACAGGGAAATCAG CTAATCTCCCTGT True ATAAAATAA CACAATGTC True False - ACAGGGAGATTAG GAGTTGTT CTGATTTCCCTGT TTATTTTAT 48 RIL182_RS12975 intergenic 2723220 2723627 - down AAATTATAAAGTACATTGGATATTTATAAGTTGCTTATGGAGAATACCAAATAATGTAAAAATATTGGATTCCAGAATATGTTTGACATTGTGACAGGGAGATTAGGAGTTGTTCTGATTTCCCTGTTATTTTATGTCTTGCTGAGAAATTGTAATAAAAAAATTCGTAGTAAGTGCAAAATTGTTGTTTTATTAAGTTAAATGGAATTTTTGTTTATTCTGTTTTGTATATGAGTTGTGAGTTTGTAATGAATATATTTAAAAAAGTAGAAAAAACTGGTATAATATAATAAAAAATTGGTTGTTGTTGAATGAAATCTCAGAATTTAAAAAAGTAGGCAGTGTTGTATTATGGTAATAATTATAGTAGTCTGCTGTACTAAATAAAACGCAAAGGGGGAAAAGTT AAGTATCTTATATTTTAGAAGATTAAAATTATAAAGTACATTGGATATTTATAAGTTGCTTATGGAGAATACCAAATAATGTAAAAATATTGGATTCCAGAATATGTTTGACATTGTGACAGGGAGATTAGGAGTTGTTCTGATTTCCCTGTTATTTTATGTCTTGCTGAGAAATTGTAATAAAAAAATTCGTAGTAAGTGCAAAATTGTTGTTTTATTAAGTTAAATGGAATTTTTGTTTATTCTGTTTTGTATATGAGTTGTGAGTTTGTAATGAATATATTTAAAAAAGTAGAAAAAACTGGTATAATATAATAAAAAATTGGTTGTTGTTGAATGAAATCTCAGAATTTAAAAAAGTAGGCAGTGTTGTATTATGGTAATAATTATAGTAGTCTGCTGTACTAAATAAAACGCAAAGGGGGAAAAGTTATGTTTAAGAAGATGCCGGTATGTA AAATTATAAAGTACATTGGATATTTATAAGTTGCTTATGGAGAATACCAAATAATGTAAAAATATTGGATTCCAGAATATGTTTGACATTGTGACAGGGAGATTAGGAGTTGTTCTGATTTCCCTG 126 TTerm_1004 NZ_LR027880.1 2742412 2742430 19 2742437 2742455 19 6 78 0 18 68 31 73 26 0 2742433 AGTGGACGATTATTCTTTA TAAAAAACAACCATCCACT True AACAGAAAA AAAAACTCT True False - AGTGGATGGTTGTTTTTTA CACAGT TAAAGAATAATCGTCCACT TTTTCTGTT 36 RIL182_RS13095 intergenic 2742126 2742473 - down AGAATAGACAGAGTTTTTAGTGGATGGTTGTTTTTTACACAGTTAAAGAATAATCGTCCACTTTTCTGTTTTGGGCAAGAAAATGTTTTTTACTTTTAGTTCGGTTATATGGTTATTTATAATAAAAATATAGAAACAATGCGTCGTTTAATAGATGAAATATGAAGTATATGTTGAGTTTTCTTGAGCTGAAATATAGGTCATGAGTTTTTTATAATAAGAATAACTTTATGCTTTTTTGAATAAAAAAGTCTTACTTCGTGCAAAAAAATCTTACTTCGTGCAGAAAAGGTGAAATGTTGTAAGATACTTGCCGATAAAAAAGAAAAATAAGGAGGTTTTCAAAT TTTCGGTATTCAAATTAAGACAATAAGAATAGACAGAGTTTTTAGTGGATGGTTGTTTTTTACACAGTTAAAGAATAATCGTCCACTTTTCTGTTTTGGGCAAGAAAATGTTTTTTACTTTTAGTTCGGTTATATGGTTATTTATAATAAAAATATAGAAACAATGCGTCGTTTAATAGATGAAATATGAAGTATATGTTGAGTTTTCTTGAGCTGAAATATAGGTCATGAGTTTTTTATAATAAGAATAACTTTATGCTTTTTTGAATAAAAAAGTCTTACTTCGTGCAAAAAAATCTTACTTCGTGCAGAAAAGGTGAAATGTTGTAAGATACTTGCCGATAAAAAAGAAAAATAAGGAGGTTTTCAAATATGAAAAAGCTTAATGATGTAGCAC AGAATAGACAGAGTTTTTAGTGGATGGTTGTTTTTTACACAGTTAAAGAATAATCGTCCAC 61 TTerm_1005 NZ_LR027880.1 2742851 2742858 8 2742867 2742874 8 8 100 0 16 62 37 62 37 0 2742862 TTTACCAC GTGGTAAA True GCAAAACCT TTCAAAAAG True False - TTTACCAC TTGACATT GTGGTAAA AGGTTTTGC 56 RIL182_RS22385 intergenic 2742844 2743371 - down AAATACTGCAAATCCAACGAATCAATATCTTTTTGAAAAATAATATTTTCACCAAGGGGAAAGTCTACCCTTTTTTAGAGGAAAAATATTTTTCATTTATCTATTGACATTTATTAGCTGGACTTTTTGAGTCTCTATTTGATTAAGTATAACCGATATAAAGTTTTCATTCTCTATGATTTACATGAGATTATTAAGGTTTTCCTAATGGCTTATAGCGCCGATCTGTTGGATTCTCCGCAGTTTTTGGAATCAGCCAAGCACCAGCCATCTTCACAGCGCCGGGAATACGCCCGCCGACACACCATGTGAGATGTCATGCCCTATTTCTCGGCACCCACTTTCAATGTCATATAGTCCATTTCGCACCTTCACAAAATATATTACAATTCTCTCGCTCGAACAATACAAGACAGAAAACATGAATAAAAATAAGGTGAAAATAGGGCAAGCACTACGAAAGATAGCTTTCTTTGATGGTGTTTGACCTTTTTGAATTTACCACTTGACATTGTGGTAAAGGTTTT CTGCTAAATGCGACATAGCCGCATAAAATACTGCAAATCCAACGAATCAATATCTTTTTGAAAAATAATATTTTCACCAAGGGGAAAGTCTACCCTTTTTTAGAGGAAAAATATTTTTCATTTATCTATTGACATTTATTAGCTGGACTTTTTGAGTCTCTATTTGATTAAGTATAACCGATATAAAGTTTTCATTCTCTATGATTTACATGAGATTATTAAGGTTTTCCTAATGGCTTATAGCGCCGATCTGTTGGATTCTCCGCAGTTTTTGGAATCAGCCAAGCACCAGCCATCTTCACAGCGCCGGGAATACGCCCGCCGACACACCATGTGAGATGTCATGCCCTATTTCTCGGCACCCACTTTCAATGTCATATAGTCCATTTCGCACCTTCACAAAATATATTACAATTCTCTCGCTCGAACAATACAAGACAGAAAACATGAATAAAAATAAGGTGAAAATAGGGCAAGCACTACGAAAGATAGCTTTCTTTGATGGTGTTTGACCTTTTTGAATTTACCACTTGACATTGTGGTAAAGGTTTTGCTGTTGTTGCGGATCAGATCAGAA AAATACTGCAAATCCAACGAATCAATATCTTTTTGAAAAATAATATTTTCACCAAGGGGAAAGTCTACCCTTTTTTAGAGGAAAAATATTTTTCATTTATCTATTGACATTTATTAGCTGGACTTTTTGAGTCTCTATTTGATTAAGTATAACCGATATAAAGTTTTCATTCTCTATGATTTACATGAGATTATTAAGGTTTTCCTAATGGCTTATAGCGCCGATCTGTTGGATTCTCCGCAGTTTTTGGAATCAGCCAAGCACCAGCCATCTTCACAGCGCCGGGAATACGCCCGCCGACACACCATGTGAGATGTCATGCCCTATTTCTCGGCACCCACTTTCAATGTCATATAGTCCATTTCGCACCTTCACAAAATATATTACAATTCTCTCGCTCGAACAATACAAGACAGAAAACATGAATAAAAATAAGGTGAAAATAGGGCAAGCACTACGAAAGATAGCTTTCTTTGATGGTGTTTGACCTTTTTGAATTTACCACTTGACATTGTGGTAA 520 TTerm_1006 NZ_LR027880.1 2748404 2748417 14 2748422 2748435 14 4 78 0 13 60 39 63 36 0 2748419 AAAAGGTACTCGCT AGCGTTTACGTTTT True TCATGCAAA CCAAGCAAG True True - AAAACGTAAACGCT CTAT AGCGAGTACCTTTT TTTGCATGA 50 RIL182_RS13135 intergenic 2748305 2748547 + down CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACT AATTTATCGTGAAAACAAAGTGTAGCACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACTTAACAAGTAACACACCTTTCGGTGT AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTT 143 TTerm_1007 NZ_LR027880.1 2748404 2748417 14 2748422 2748435 14 4 78 0 13 60 39 63 36 0 2748419 AAAAGGTACTCGCT AGCGTTTACGTTTT True TCATGCAAA CCAAGCAAG True True - AAAACGTAAACGCT CTAT AGCGAGTACCTTTT TTTGCATGA 50 RIL182_RS13140 intergenic 2748305 2748547 - down AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTG ACACCGAAAGGTGTGTTACTTGTTAAGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTGCTACACTTTGTTTTCACGATAAATT AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTT 143 TTerm_1008 NZ_LR027880.1 2748467 2748478 12 2748484 2748495 12 5 100 0 24 75 25 75 25 0 2748480 GAAAATTTCTCA TGAGAAATTTTC True GAGTAGGAG GACCTCTCA True True - GAAAATTTCTCA TTTTT TGAGAAATTTTC CTCCTACTC 64 RIL182_RS13135 intergenic 2748305 2748547 + down CACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACT AATTTATCGTGAAAACAAAGTGTAGCACAAAAAACACTTCGAGCCATCCTGCCCCGAAGTGTTTTTTGTTACGAAATAAATTAGAAATTCAAGAAAAGAGATAGTCTACTATTTATCATGCAAAAAAGGTACTCGCTATAGAGCGTTTACGTTTTCCAAGCAAGTGTTCCGTAAAATCGAGTAGGAGAAAATTTCTCAAAAAATGAGAAATTTTCGACCTCTCACACCACCGTGCGTACCGTTCGGTACACGGCGGTTCAATCAACTTAACAAGTAACACACCTTTCGGTGT AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTT 80 TTerm_1009 NZ_LR027880.1 2748467 2748478 12 2748484 2748495 12 5 100 0 24 75 25 75 25 0 2748480 GAAAATTTCTCA TGAGAAATTTTC True GAGTAGGAG GACCTCTCA True True - GAAAATTTCTCA TTTTT TGAGAAATTTTC CTCCTACTC 64 RIL182_RS13140 intergenic 2748305 2748547 - down AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTG ACACCGAAAGGTGTGTTACTTGTTAAGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTTCTCCTACTCGATTTTACGGAACACTTGCTTGGAAAACGTAAACGCTCTATAGCGAGTACCTTTTTTGCATGATAAATAGTAGACTATCTCTTTTCTTGAATTTCTAATTTATTTCGTAACAAAAAACACTTCGGGGCAGGATGGCTCGAAGTGTTTTTTGTGCTACACTTTGTTTTCACGATAAATT AGTTGATTGAACCGCCGTGTACCGAACGGTACGCACGGTGGTGTGAGAGGTCGAAAATTTCTCATTTTTTGAGAAATTTT 80 TTerm_1010 NZ_LR027880.1 2750324 2750337 14 2750345 2750358 14 7 92 0 23 46 53 46 53 0 2750340 AATCCCCATCCCTC GAGAGATGGGGATT True AAACTAAAA CACTATTAT True False - AATCCCCATCTCTC AATTAAC GAGGGATGGGGATT TTTTAGTTT 70 RIL182_RS13145 intergenic 2749830 2750364 - down ATAGTGAATCCCCATCTCTCAATTAACGAGGGATGGGGATTTTTAGTTTGCGCGCCATGGGCGCGCTCTAACGGGTGAAAGTCCCGAACACGCCCAGATAGTGGGAAGTGTATAGCTGAACAGCAAGGGTGTCTATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAATCTCTGGTCTGACGTACAGAAATCACATATAAGGCTAGGCTGCGAGAGATAAGTTGGCTAAAAGCAACGAAGTCTAATAACTATCACTTTTGTAGTAGCAGAGTAAATGTGGCGGATATATGGAGAGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCATAGGGGTTCCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATGGAGCAAAGGGGTGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAATGACAACATCTGCTGTAACCAATCGGGTAAAGGATGGTCAAATCAAGCGAGGCGGAAAGGAAAGAACGC GAGAAATACCGGAAATTATTGTATAATAGTGAATCCCCATCTCTCAATTAACGAGGGATGGGGATTTTTAGTTTGCGCGCCATGGGCGCGCTCTAACGGGTGAAAGTCCCGAACACGCCCAGATAGTGGGAAGTGTATAGCTGAACAGCAAGGGTGTCTATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAATCTCTGGTCTGACGTACAGAAATCACATATAAGGCTAGGCTGCGAGAGATAAGTTGGCTAAAAGCAACGAAGTCTAATAACTATCACTTTTGTAGTAGCAGAGTAAATGTGGCGGATATATGGAGAGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCATAGGGGTTCCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATGGAGCAAAGGGGTGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAATGACAACATCTGCTGTAACCAATCGGGTAAAGGATGGTCAAATCAAGCGAGGCGGAAAGGAAAGAACGCATGGACACAAGTAGTCTAATGGAGC ATAGTGAATCCCCATCTCTCAATTAACGAGGGATGGGGAT 40 TTerm_1011 NZ_LR027880.1 2769758 2769768 11 2769776 2769786 11 7 90 0 17 50 50 50 50 0 2769771 AGCCATCTGGA TCCAAATGGCT True AAAAAAATA TATGTAAAA True False - AGCCATTTGGA CTAATCA TCCAGATGGCT TATTTTTTT 50 RIL182_RS13230 intergenic 2769678 2769798 - down GATTTTTACATAAGCCATTTGGACTAATCATCCAGATGGCTATTTTTTTACCCATTTTTGGGTAATGGATGTAGAAAGAAGGTGAGAACATTGAAGATAAAAAAGGTGGATGATAAGCCT CAGTTCTTTACAATAGAATTAAATAGATTTTTACATAAGCCATTTGGACTAATCATCCAGATGGCTATTTTTTTACCCATTTTTGGGTAATGGATGTAGAAAGAAGGTGAGAACATTGAAGATAAAAAAGGTGGATGATAAGCCTATGGTCATTCACACCAAGGAGAAAG GATTTTTACATAAGCCATTTGGACTAATCATCCAGATGGC 40 TTerm_1012 NZ_LR027880.1 2803236 2803252 17 2803258 2803274 17 5 82 0 19 55 44 57 42 0 2803254 AAAGGCAGCTACAAACC GGTCTATAACTGCCTTT True CATACAAAA GCGCTGTAA True False - AAAGGCAGTTATAGACC GTAAA GGTTTGTAGCTGCCTTT TTTTGTATG 62 RIL182_RS13430 intergenic 2803178 2803293 - down AATAGAATTATTACAGCGCAAAGGCAGTTATAGACCGTAAAGGTTTGTAGCTGCCTTTTTTGTATGTATTTATGGGACTTTTGGACAAAATGTCCAAAAGTGGAAAGGGACAAAA TGTTATATTATCCATTATATAAATAAATAGAATTATTACAGCGCAAAGGCAGTTATAGACCGTAAAGGTTTGTAGCTGCCTTTTTTGTATGTATTTATGGGACTTTTGGACAAAATGTCCAAAAGTGGAAAGGGACAAAAATGAGTAGAAAAAATGGAAAGAATT AATAGAATTATTACAGCGCAAAGGCAGTTATAGACCGTAAAGGTTTGTAGCTGCCTT 57 TTerm_1013 NZ_LR027880.1 2809153 2809159 7 2809167 2809173 7 7 100 0 14 100 0 100 0 0 2809162 TTTTTAT ATAAAAA True TTAAAAAAT AGGACTAAG True False - TTTTTAT ATGCAAA ATAAAAA ATTTTTTAA 28 RIL182_RS13475 intergenic 2809132 2809394 - down GAAGAGCGTAAATATTTTTACTTCACAACGCTGATTGTTACAAGGGATGATGTGAATGAGTACATGAAATATCATGCTGAGTACACGAAAGCGAACCGATTTAAAGATATTGTTTGCAAAATCTATATATAACTCGAAAGGGAAGCGCAATGCTTCCCTTTCTTATATCTCTCGATTAGGACTAAATCCTTAAAGCTATGGCTTAAAAAGGACTTAGTCCTTTTTTATATGCAAAATAAAAATTTTTTAAAGGAGGTTCACT CTGCAATTGCCAATGCAGGAAAGTAGAAGAGCGTAAATATTTTTACTTCACAACGCTGATTGTTACAAGGGATGATGTGAATGAGTACATGAAATATCATGCTGAGTACACGAAAGCGAACCGATTTAAAGATATTGTTTGCAAAATCTATATATAACTCGAAAGGGAAGCGCAATGCTTCCCTTTCTTATATCTCTCGATTAGGACTAAATCCTTAAAGCTATGGCTTAAAAAGGACTTAGTCCTTTTTTATATGCAAAATAAAAATTTTTTAAAGGAGGTTCACTATGAACAGTACAGCGTTAGGAGCAG GAAGAGCGTAAATATTTTTACTTCACAACGCTGATTGTTACAAGGGATGATGTGAATGAGTACATGAAATATCATGCTGAGTACACGAAAGCGAACCGATTTAAAGATATTGTTTGCAAAATCTATATATAACTCGAAAGGGAAGCGCAATGCTTCCCTTTCTTATATCTCTCGATTAGGACTAAATCCTTAAAGCTATGGCTTAAAAAGGACTTAGTCCTTTTTTATATGCAAAATAAAA 241 TTerm_1014 NZ_LR027880.1 2812222 2812227 6 2812235 2812240 6 7 100 0 12 50 50 50 50 0 2812230 TGTTCC GGAACA True TAAAACTTT TTTTGGATT True True - TGTTCC ACATAAC GGAACA AAAGTTTTA 48 RIL182_RS21740 intergenic 2812036 2812253 - down AACAAATCCAAAATGTTCCACATAACGGAACAAAGTTTTACATTGTGAAAATGTTACAAAAAAACAGGGAAAAACAGTAAAAAAAATGTTGCTATTTAGACAAAATATGTTAGAATAAATATGTGCGTTTTAGAAAGGCACATAACATGGCTTGATTATGGAAACAAATACGGTGTCCATAATTACATAGTAATTTATTTTAGGAGGAATTATCAAA TGTATGCAAAATGGAAAAAGAAATAAACAAATCCAAAATGTTCCACATAACGGAACAAAGTTTTACATTGTGAAAATGTTACAAAAAAACAGGGAAAAACAGTAAAAAAAATGTTGCTATTTAGACAAAATATGTTAGAATAAATATGTGCGTTTTAGAAAGGCACATAACATGGCTTGATTATGGAAACAAATACGGTGTCCATAATTACATAGTAATTTATTTTAGGAGGAATTATCAAAATGGCAAACAAATGGGTGTATATGT AACAAATCCAAAATGTTCCACATAACGGAAC 31 TTerm_1015 NZ_LR027880.1 2814825 2814844 20 2814854 2814873 20 9 90 0 30 60 40 61 38 0 2814848 AAAAACAGACGGATCATTCC GGAATAATCCGTCTGTCTTT True TATGAATGA TTCTTTTTA True True - AAAGACAGACGGATTATTCC TGTTGGGTG GGAATGATCCGTCTGTTTTT TCATTCATA 76 RIL182_RS13485 intergenic 2814605 2814902 - down GGATTTTTCGAAGCGGAGAATAAAAAGAAAAAGACAGACGGATTATTCCTGTTGGGTGGGAATGATCCGTCTGTTTTTCATTCATAGGAAATTACGTCCTATGAATGAAAACGCCCTCCGGGCGGGATGCGCACCTCGCGGAGGAGAAGAAAAATATTTTGAAGTATGTACAGGCAGATAGTCTGCGGAGATATGATAGAAATGATTTCGCAAACAATTGAAAATAGTCGTATTGCGGTTATAATATAGAAAAGGTAATGTAACATAGCGGTACAAATGAAGGAGGAGTTTTAGTTT ACTATGACACGGAAGTAGATTTCTAGGATTTTTCGAAGCGGAGAATAAAAAGAAAAAGACAGACGGATTATTCCTGTTGGGTGGGAATGATCCGTCTGTTTTTCATTCATAGGAAATTACGTCCTATGAATGAAAACGCCCTCCGGGCGGGATGCGCACCTCGCGGAGGAGAAGAAAAATATTTTGAAGTATGTACAGGCAGATAGTCTGCGGAGATATGATAGAAATGATTTCGCAAACAATTGAAAATAGTCGTATTGCGGTTATAATATAGAAAAGGTAATGTAACATAGCGGTACAAATGAAGGAGGAGTTTTAGTTTATGAAAGGAGGGATGAAAAAAGCTT GGATTTTTCGAAGCGGAGAATAAAAAGAAAAAGACAGACGGATTATTCCTGTTGGGTGGGAATGATCCGTCTGTTTT 77 TTerm_1016 NZ_LR027880.1 2816276 2816294 19 2816303 2816321 19 8 78 0 18 89 10 93 6 0 2816298 AAAATAAGAAGCATTTTTA TAATAATTCTTAATATTTT True ATCTTTCAA CTAAGCATT True True - AAAATATTAAGAATTATTA AAAATGTA TAAAAATGCTTCTTATTTT TTGAAAGAT 36 RIL182_RS13490 intergenic 2816119 2816322 - down GAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAG AATGTGGATTTAAAAACAATGCTTAGAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTTTTGAAAGATATGATATAATGTTACCATACATATTGTTATTTAATTAACAAAATATGTGATGGTTATATAAAAGTTGCACACAGTAAATGACACAAAAAATACAGGCATGTGTATGTGTCAGGGGGCGGCCTTTTGATGGCGGCAGATTGGAGGAAAGATGGCAAGATTTACATTACCACGCG GAAAATATTAAGAATTATTAAAAATGTATAAAAATGCTTCTTATTT 46 TTerm_1017 NZ_LR027880.1 2828601 2828619 19 2828627 2828644 18 7 84 5 16 62 37 68 31 0 2828622 AATCTTGTGCAAAAAGGAC GTGCTCTTTGCAAAGATT True TAATAAACA TACAATCTC True False - AATCTTTGCAAAGAGCAC ACGTAAA GTCCTTTTTGCACAAGATT TGTTTATTA 64 RIL182_RS13530 intergenic 2828397 2828988 - down AAGAGTAACATTTTTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATGGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACACATTTTTTGTATTTTATATCGTACAGAATCGAAACATAATTGCAATTCTTAAAAAATCATGATACCCTTTGTATACATAATACTTATATAGGCAAAAAATTTTGCTGTATAATTTTTGTGTATGCAGAGGGTATTGTTATAATAAGAAATTTGCCCGTAAAATGCATCTAAATTGAGATTGTAAATCTTTGCAAAGAGCACACGTAAAGTCCTTTTTGCACAAGATTGTTTATTAGAAAAAGAAAAGACGCTGACATCAAAAGAATCACTTGAGATGAAAGGTATGGCATAAATGGAAAATGTAAGAGGCGCAATGCGACTCTTATTAGGCTGTACCTGAAATTAGGGGTACAGTTTTTTTTATTCCAAAATCTGTATCATAGATTCGTGTATGAAAATCATATAAATTTGATAATCAGGGAGGAAACGA AAGAGTAACATTTTTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATGGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACACATTTTTTGTATTTTATATCGTACAGAATCGAAACATAATTGCAATTCTTAAAAAATCATGATACCCTTTGTATACATAATACTTATATAGGCAAAAAATTTTGCTGTATAATTTTTGTGTATGCAGAGGGTATTGTTATAATAAGAAATTTGCCCGTAAAATGCATCTAAATTGAGATTGTAAATCTTTGCAAAGAGCACACGTAAAGTCCTTTTTGCACAAGAT 387 TTerm_1018 NZ_LR027880.1 2828825 2828830 6 2828839 2828844 6 8 100 0 12 66 33 66 33 0 2828834 ATGTGT ACACAT True TACAAAAAA ACTGTGTGA True False - ATGTGT GAACAGTA ACACAT TTTTTTGTA 40 RIL182_RS13530 intergenic 2828397 2828988 - down AAGAGTAACATTTTTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATGGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACACATTTTTTGTATTTTATATCGTACAGAATCGAAACATAATTGCAATTCTTAAAAAATCATGATACCCTTTGTATACATAATACTTATATAGGCAAAAAATTTTGCTGTATAATTTTTGTGTATGCAGAGGGTATTGTTATAATAAGAAATTTGCCCGTAAAATGCATCTAAATTGAGATTGTAAATCTTTGCAAAGAGCACACGTAAAGTCCTTTTTGCACAAGATTGTTTATTAGAAAAAGAAAAGACGCTGACATCAAAAGAATCACTTGAGATGAAAGGTATGGCATAAATGGAAAATGTAAGAGGCGCAATGCGACTCTTATTAGGCTGTACCTGAAATTAGGGGTACAGTTTTTTTTATTCCAAAATCTGTATCATAGATTCGTGTATGAAAATCATATAAATTTGATAATCAGGGAGGAAACGA AAGAGTAACATTTTTGTTACTGTTCACTCGCAAGCTTGACACTTGCTGTCAAGCTGTGCGCCAAAGACTATATCATGCCAGATTACAGCCCCATGCATCGAAGATGCATTTAAAATGGGCTGTAATCGTTACTGCTCACACAGTATGTGTGAACAGTAACACA 163 TTerm_1019 NZ_LR027880.1 2837850 2837874 25 2837883 2837907 25 8 84 0 30 54 46 52 47 0 2837878 TTTCTGAAAAAAGCAGGGAGCGTCA TGACGTTCCCTGCTTTCTCCTGAAA True AACCCACAT ATATTCTAT True False - TTTCAGGAGAAAGCAGGGAACGTCA GAATGATT TGACGCTCCCTGCTTTTTTCAGAAA ATGTGGGTT 84 RIL182_RS13565 intergenic 2837646 2837916 - down ATAGAATATTTTCAGGAGAAAGCAGGGAACGTCAGAATGATTTGACGCTCCCTGCTTTTTTCAGAAATGTGGGTTGTCAGTTTAGCTAGCATCACTTTACCTTGATAACCATTTATTTTGATAAAGTGATGACACGCAGTATAAAAAATGATACAATATTTTTGTATGCATATATGTACGCTTAGAATTTTCTAAATGAAGAATTCTAGGAGTACATGAAAAAAGGGAAATGAAATAAAAAAGAAGGCGCTGAATTTGAAAGTGACAAAA CAGGGTATGGGTTTAAGAATTTTTAATAGAATATTTTCAGGAGAAAGCAGGGAACGTCAGAATGATTTGACGCTCCCTGCTTTTTTCAGAAATGTGGGTTGTCAGTTTAGCTAGCATCACTTTACCTTGATAACCATTTATTTTGATAAAGTGATGACACGCAGTATAAAAAATGATACAATATTTTTGTATGCATATATGTACGCTTAGAATTTTCTAAATGAAGAATTCTAGGAGTACATGAAAAAAGGGAAATGAAATAAAAAAGAAGGCGCTGAATTTGAAAGTGACAAAAATGATAAGCAGGAAAATGGCAGGCG ATAGAATATTTTCAGGAGAAAGCAGGGAACGTCAGAATGATTTGACGCTCCCTGCTTTTTTCAGAA 66 TTerm_1020 NZ_LR027880.1 2839728 2839744 17 2839750 2839766 17 5 82 0 19 82 17 92 7 0 2839746 AAAGACCATAAAACATT AATATTTTATGATGTTT True CACATGTAA CAATCAAAC True False - AAACATCATAAAATATT AAGAA AATGTTTTATGGTCTTT TTACATGTG 38 RIL182_RS13570 intergenic 2839448 2839766 - down AAACATCATAAAATATTAAGAAAATGTTTTATGGTCTTTTACATGTGGATAGGATATAATGTGCGTAGGCAGTGAGCGGTGCCAAATAAGAGAAATACAAAAAATGACTGCTTGCAGGCATTTTTTGTGTTTTTCTTATTTGATAGGGCGGTGCTAGGTGCCGGTGGCACCTGTTTAGCACGGACCGAAGTGGAACGTAGATGCCCGTCAGTCCAGTGGCACTGCGGATGAAAGAATTTGAAAAATTAAAATAGATAAGATAGAGAGTGAACGGATTTGAATGCAGAGAAGCGAAGAAAAAAACGACTGAGAAACCTG CACTGTCGCAGTTCCTGTTTGATTGAAACATCATAAAATATTAAGAAAATGTTTTATGGTCTTTTACATGTGGATAGGATATAATGTGCGTAGGCAGTGAGCGGTGCCAAATAAGAGAAATACAAAAAATGACTGCTTGCAGGCATTTTTTGTGTTTTTCTTATTTGATAGGGCGGTGCTAGGTGCCGGTGGCACCTGTTTAGCACGGACCGAAGTGGAACGTAGATGCCCGTCAGTCCAGTGGCACTGCGGATGAAAGAATTTGAAAAATTAAAATAGATAAGATAGAGAGTGAACGGATTTGAATGCAGAGAAGCGAAGAAAAAAACGACTGAGAAACCTGGTGTGCATAGTATATTGTTCGCTGC AAACATCATAAAATATTAAGAAAATGTTTTATGGTCTT 38 TTerm_1021 NZ_LR027880.1 2843065 2843082 18 2843091 2843108 18 8 100 0 36 44 55 44 55 0 2843086 AAAATCCCCCACGCAGTG CACTGCGTGGGGGATTTT True TTAATATGA TTATATCAT True True - AAAATCCCCCACGCAGTG TTTGCAGC CACTGCGTGGGGGATTTT TCATATTAA 104 RIL182_RS13580 intergenic 2842809 2843193 - down AAAGTAAGAGTTCAATGAAATAATAAGATAGCCGAGTGAAGCAAGTGTAGATCACGATCATGTGCTGGTTTTGCACATGATATAAAAAATCCCCCACGCAGTGTTTGCAGCCACTGCGTGGGGGATTTTCATATTAAGAAGGGGGTTTTGTCATATTGACGATAGAAACCCAGCTGTTAAATATTTAACAGCAAGTCTATTATGTACCCAAAAGTACTAAAAATCCAGTGAACATATTGTGAATTTTTGTATTTTAATTGTTAATAAATGAAAATGAAACATGAAAGAGGATTGCGGATGACTTGACGTTTCCTTTGCTTTTCCCGTATAATAAAAACGTATGGGCATATGCCCGGCGTATTTTTTTTTGAAATGGAGAGTAAT GAATCTCTTATCCGATTTATGAATAAAAGTAAGAGTTCAATGAAATAATAAGATAGCCGAGTGAAGCAAGTGTAGATCACGATCATGTGCTGGTTTTGCACATGATATAAAAAATCCCCCACGCAGTGTTTGCAGCCACTGCGTGGGGGATTTTCATATTAAGAAGGGGGTTTTGTCATATTGACGATAGAAACCCAGCTGTTAAATATTTAACAGCAAGTCTATTATGTACCCAAAAGTACTAAAAATCCAGTGAACATATTGTGAATTTTTGTATTTTAATTGTTAATAAATGAAAATGAAACATGAAAGAGGATTGCGGATGACTTGACGTTTCCTTTGCTTTTCCCGTATAATAAAAACGTATGGGCATATGCCCGGCGTATTTTTTTTTGAAATGGAGAGTAATATGTCAATAGATCAGAGTAAAATCA AAAGTAAGAGTTCAATGAAATAATAAGATAGCCGAGTGAAGCAAGTGTAGATCACGATCATGTGCTGGTTTTGCACATGATATAAAAAATCCCCCACGCAGTGTTTGCAGCCACTGCGTGGGGGATTT 128 TTerm_1022 NZ_LR027880.1 2857781 2857788 8 2857796 2857803 8 7 87 0 11 50 50 42 57 0 2857791 GCAGCTAT ATTGCTGC True AAAAAATAG AAAATTCAC True False - GCAGCAAT CAATATA ATAGCTGC CTATTTTTT 38 RIL182_RS13625 intergenic 2857753 2857875 - down ATGGTATACAACATGACGCCGGCATTGCCAGCGTCTGTTTCTTTCTTTTTTAAAATAAGAAAAGTGAATTTTGCAGCAATCAATATAATAGCTGCTATTTTTTAGGTAAAGAGAGGAATTTC ACTCTATGGGAGTATTTCACTTTTAATGGTATACAACATGACGCCGGCATTGCCAGCGTCTGTTTCTTTCTTTTTTAAAATAAGAAAAGTGAATTTTGCAGCAATCAATATAATAGCTGCTATTTTTTAGGTAAAGAGAGGAATTTCATGAGCGCAGAAAAGAGAAAAGTTT ATGGTATACAACATGACGCCGGCATTGCCAGCGTCTGTTTCTTTCTTTTTTAAAATAAGAAAAGTGAATTTTGCAGCAATCAATATAATAGCTG 94 TTerm_1023 NZ_LR027880.1 2864429 2864442 14 2864449 2864462 14 6 92 0 23 46 53 46 53 0 2864445 AAAGCCCGAAAAGG CCTTTCCGGGCTTT True ACTTACAAA GGAAATTTA True False - AAAGCCCGGAAAGG TATAAG CCTTTTCGGGCTTT TTTGTAAGT 70 RIL182_RS13655 intergenic 2864081 2864497 - down AGCTGCAGATCTTGTCTGAATTGATGTAAATTTCCAAAGCCCGGAAAGGTATAAGCCTTTTCGGGCTTTTTGTAAGTCAGAAGCTGGTGATAAAATAAACTTTTGGTTACAGGATTATAACTGGAGCATGGAACAGATAGCAGGCGGTCCGATAGATAAGATATATCTGTGAAAATATGTCGAAAATTATATCATAATTGTATACAAAGTATATAATTAGCATAATACGAAATTGTGTATTGACAAAAACAGGGTAAAAACGTATAATAAAAATACATATAGAGGGTAGTTCACATGCAAATGTACTAAACCGAAAAAGTAAGACGCTTATGATTGCGTGTGCTTTTTCGGTTTTTTTGATTTTGAATGCAGATGTGGTGGAGTAATGTGACTTGTTGTTTAGAGGGGGGAAACAA AGAGACTGGTTGAGCTTTACAAATAAGCTGCAGATCTTGTCTGAATTGATGTAAATTTCCAAAGCCCGGAAAGGTATAAGCCTTTTCGGGCTTTTTGTAAGTCAGAAGCTGGTGATAAAATAAACTTTTGGTTACAGGATTATAACTGGAGCATGGAACAGATAGCAGGCGGTCCGATAGATAAGATATATCTGTGAAAATATGTCGAAAATTATATCATAATTGTATACAAAGTATATAATTAGCATAATACGAAATTGTGTATTGACAAAAACAGGGTAAAAACGTATAATAAAAATACATATAGAGGGTAGTTCACATGCAAATGTACTAAACCGAAAAAGTAAGACGCTTATGATTGCGTGTGCTTTTTCGGTTTTTTTGATTTTGAATGCAGATGTGGTGGAGTAATGTGACTTGTTGTTTAGAGGGGGGAAACAAATGCAGCAAATTAATGGAAAGATTG AGCTGCAGATCTTGTCTGAATTGATGTAAATTTCCAAAGCCCGGAAAGGTATAAGCCTTTTCGGGCTT 68 TTerm_1024 NZ_LR027880.1 2873314 2873332 19 2873339 2873356 18 6 89 5 21 59 40 58 41 0 2873335 AAAAATAGCACTGACCAGA TCTGGCAGTGCTGTTTTT True ATAACTAAA AATTTTTCC True True - AAAAACAGCACTGCCAGA TCTTAT TCTGGTCAGTGCTATTTTT TTTAGTTAT 74 RIL182_RS13665 intergenic 2873313 2873365 + down AAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTTAATTTTTCC TTCTGACGATGAGAACGATAACTAAAAAAATAGCACTGACCAGAATAAGATCTGGCAGTGCTGTTTTTAATTTTTCCTAAAATGTGGTCCATTTTAATGTAT GGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTT 51 TTerm_1025 NZ_LR027880.1 2873314 2873332 19 2873339 2873356 18 6 89 5 21 59 40 58 41 0 2873335 AAAAATAGCACTGACCAGA TCTGGCAGTGCTGTTTTT True ATAACTAAA AATTTTTCC True True - AAAAACAGCACTGCCAGA TCTTAT TCTGGTCAGTGCTATTTTT TTTAGTTAT 74 RIL182_RS13670 intergenic 2873313 2873365 - down GGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTTT ATACATTAAAATGGACCACATTTTAGGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTTTTTAGTTATCGTTCTCATCGTCAGAA GGAAAAATTAAAAACAGCACTGCCAGATCTTATTCTGGTCAGTGCTATTTT 51 TTerm_1026 NZ_LR027880.1 2877749 2877767 19 2877775 2877792 18 7 84 5 16 56 43 56 43 0 2877770 ACAAAAATAACCGCACAGT ACCGTGCGGCATTTTTGT True ATAAAGACA CAAACCATA True True - ACAAAAATGCCGCACGGT TTACCAG ACTGTGCGGTTATTTTTGT TGTCTTTAT 64 RIL182_RS13685 intergenic 2877758 2877825 + down CCGCACAGTCTGGTAAACCGTGCGGCATTTTTGTCAAACCATATGTCGGACTAACAGCTGTTTTCTT GAATAATATAAAGACACAAAAATAACCGCACAGTCTGGTAAACCGTGCGGCATTTTTGTCAAACCATATGTCGGACTAACAGCTGTTTTCTTTAACACATCATGCTGTATTCCTGTA AAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGGTTATTTTTG 76 TTerm_1027 NZ_LR027880.1 2877749 2877767 19 2877775 2877792 18 7 84 5 16 56 43 56 43 0 2877770 ACAAAAATAACCGCACAGT ACCGTGCGGCATTTTTGT True ATAAAGACA CAAACCATA True True - ACAAAAATGCCGCACGGT TTACCAG ACTGTGCGGTTATTTTTGT TGTCTTTAT 64 RIL182_RS13690 intergenic 2877758 2877825 - down AAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGG TACAGGAATACAGCATGATGTGTTAAAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGGTTATTTTTGTGTCTTTATATTATTC AAGAAAACAGCTGTTAGTCCGACATATGGTTTGACAAAAATGCCGCACGGTTTACCAGACTGTGCGGTTATTTTTG 76 TTerm_1028 NZ_LR027880.1 2901153 2901173 21 2901178 2901198 21 4 76 0 17 59 40 62 37 0 2901175 AACGCAGCTCTTTCGCAACAA TTGTTTTGAAAGTAGTGCGTT True CGCATAAAA AATATCAGC True False - AACGCACTACTTTCAAAACAA TTTT TTGTTGCGAAAGAGCTGCGTT TTTTATGCG 42 RIL182_RS13790 intergenic 2901149 2901376 - down AGGCCACCAACCACCTAAAAATTAATCACGGTCATTAAATTAATCGGAATGGCTCTCACCGAAGGTGATGTAATCCATGTAGATTAATTTGAAGACCCTAGGGCGAAATTTTCCATTTGGGTGCACTTAAGGACATCCGAAATCAAAACTGAATATTTAGTTCCAATAAGCTGATATTAACGCACTACTTTCAAAACAATTTTTTGTTGCGAAAGAGCTGCGTTTTT TTCCATTATATGCTGATGTATGTTAAGGCCACCAACCACCTAAAAATTAATCACGGTCATTAAATTAATCGGAATGGCTCTCACCGAAGGTGATGTAATCCATGTAGATTAATTTGAAGACCCTAGGGCGAAATTTTCCATTTGGGTGCACTTAAGGACATCCGAAATCAAAACTGAATATTTAGTTCCAATAAGCTGATATTAACGCACTACTTTCAAAACAATTTTTTGTTGCGAAAGAGCTGCGTTTTTATGCGTGTAAGAAAAATGAATCAAG AGGCCACCAACCACCTAAAAATTAATCACGGTCATTAAATTAATCGGAATGGCTCTCACCGAAGGTGATGTAATCCATGTAGATTAATTTGAAGACCCTAGGGCGAAATTTTCCATTTGGGTGCACTTAAGGACATCCGAAATCAAAACTGAATATTTAGTTCCAATAAGCTGATATTAACGCACTACTTTCAAAACAATTTTTTGTTGCGAAAGAGCTGCGT 223 TTerm_1029 NZ_LR027880.1 2924747 2924755 9 2924763 2924771 9 7 88 0 13 83 16 87 12 0 2924758 TTTACTTTT AAAAGCAAA True GTCAAAATT TCCATGCGG True False - TTTGCTTTT CCACACA AAAAGTAAA AATTTTGAC 42 RIL182_RS13865 intergenic 2924627 2924834 - down GTATTTTCTGTAATATAAAAGATATTGCAGAATACTTCTTATAAAAGTAAAATTCCGCATGGATTTGCTTTTCCACACAAAAAGTAAAATTTTGACTTTTATAGATATTAATTTACAATTCTATCCACTATTTTGAAAGATTCCCCAAAGCACTTTTGATAAAATATCTGCAGTAAATGAACTTTTGCAGAAAGGAGAGCATGCTTT CACTAAAGCTTGTTTTTACTAAATAGTATTTTCTGTAATATAAAAGATATTGCAGAATACTTCTTATAAAAGTAAAATTCCGCATGGATTTGCTTTTCCACACAAAAAGTAAAATTTTGACTTTTATAGATATTAATTTACAATTCTATCCACTATTTTGAAAGATTCCCCAAAGCACTTTTGATAAAATATCTGCAGTAAATGAACTTTTGCAGAAAGGAGAGCATGCTTTATGGAACTTCAGAAATACGAACAGG GTATTTTCTGTAATATAAAAGATATTGCAGAATACTTCTTATAAAAGTAAAATTCCGCATGGATTTGCTTTTCCACACAAAAAGTAA 87 TTerm_1030 NZ_LR027880.1 2930388 2930401 14 2930406 2930419 14 4 85 0 18 42 57 41 58 0 2930403 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS13905 intergenic 2930389 2930438 + down AATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAG ATTTCGAACCAAAAAGAAGAAATAAAATGTGCCGCCCTGATGGGCGGCATGTTTTTTAAAAAGGCAAGGTACAGATGATTACGTACTTACTTCTTAGCT CTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 50 TTerm_1031 NZ_LR027880.1 2930388 2930401 14 2930406 2930419 14 4 85 0 18 42 57 41 58 0 2930403 AAAATGTGCCGCCC GGGCGGCATGTTTT True GAAGAAATA TTAAAAAGG True True - AAAACATGCCGCCC ATCA GGGCGGCACATTTT TATTTCTTC 84 RIL182_RS13910 intergenic 2930389 2930438 - down CTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATT AGCTAAGAAGTAAGTACGTAATCATCTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTTTATTTCTTCTTTTTGGTTCGAAAT CTGTACCTTGCCTTTTTAAAAAACATGCCGCCCATCAGGGCGGCACATTT 50 TTerm_1032 NZ_LR027880.1 2978361 2978366 6 2978371 2978376 6 4 100 0 12 50 50 50 50 0 2978368 AGAGAC GTCTCT True CAAAAAAAA CACTCACGC True False - AGAGAC AGGC GTCTCT TTTTTTTTG 48 RIL182_RS14155 intergenic 2978250 2978411 - down AAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTCTTTTTTTTGCATAAAAATAAAAAAGTTACAGATAACCATACGATTCTTGACGTTTTGAAGATTCTGTGTCAAAAAATGGTATTATTAGGAAAAAAGAGAGGGGGAATCAAG TATTGTATGAGATTTTTTCTATGTAAAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTCTTTTTTTTGCATAAAAATAAAAAAGTTACAGATAACCATACGATTCTTGACGTTTTGAAGATTCTGTGTCAAAAAATGGTATTATTAGGAAAAAAGAGAGGGGGAATCAAGATGAGAAATCTGTTAAACCGCTATT AAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTC 50 TTerm_1033 NZ_LR027880.1 2978356 2978371 16 2978381 2978396 16 9 81 0 17 59 40 61 38 0 2978375 AAAAAAGAGACGCCTG CACGCATCTCTTATTT True TTATGCAAA CCCTTTACA True False - AAATAAGAGATGCGTG AGTGAGAGA CAGGCGTCTCTTTTTT TTTGCATAA 66 RIL182_RS14155 intergenic 2978250 2978411 - down AAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTCTTTTTTTTGCATAAAAATAAAAAAGTTACAGATAACCATACGATTCTTGACGTTTTGAAGATTCTGTGTCAAAAAATGGTATTATTAGGAAAAAAGAGAGGGGGAATCAAG TATTGTATGAGATTTTTTCTATGTAAAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTCTTTTTTTTGCATAAAAATAAAAAAGTTACAGATAACCATACGATTCTTGACGTTTTGAAGATTCTGTGTCAAAAAATGGTATTATTAGGAAAAAAGAGAGGGGGAATCAAGATGAGAAATCTGTTAAACCGCTATT AAGAAATGTAAAGGGAAATAAGAGATGCGTGAGTGAGAGACAGGCGTCTCTTTTT 55 TTerm_1034 NZ_LR027880.1 2992965 2992972 8 2992982 2992989 8 9 100 0 16 37 62 37 62 0 2992976 TATGCGGC GCCGCATA True AAAACATAT ATAAAAACA True False - TATGCGGC TGGGTTAAG GCCGCATA ATATGTTTT 72 RIL182_RS14210 intergenic 2992939 2993156 + down TTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGT AAAACTTGTTAACGGTTTAGCTTAATTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGTTATTTTTCTGACCGGCTGTACTTCA ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCAT 191 TTerm_1035 NZ_LR027880.1 2992965 2992972 8 2992982 2992989 8 9 100 0 16 37 62 37 62 0 2992976 TATGCGGC GCCGCATA True AAAACATAT ATAAAAACA True False - TATGCGGC TGGGTTAAG GCCGCATA ATATGTTTT 72 RIL182_RS14220 intergenic 2992939 2993156 - down ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAA TGAAGTACAGCCGGTCAGAAAAATAACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAATTAAGCTAAACCGTTAACAAGTTTT ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCAT 191 TTerm_1036 NZ_LR027880.1 2992992 2993004 13 2993011 2993023 13 6 100 0 26 69 30 69 30 0 2993007 AAAAACACCAGTA TACTGGTGTTTTT True CGCATAATA TTGATTCAT True True - AAAAACACCAGTA TGACGG TACTGGTGTTTTT TATTATGCG 76 RIL182_RS14210 intergenic 2992939 2993156 + down TTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGT AAAACTTGTTAACGGTTTAGCTTAATTTTTGAAACATAGATAAAAACATATATGCGGCCTTAACCCAGCCGCATAATAAAAACACCAGTACCGTCATACTGGTGTTTTTTTGATTCATAGGAATTTACGTCCTATGAATCAAAAAGCCCTCCGGGCGGGATCGCACTGCGTCGGAGATGAATTATGTCGCAAAGCGACCCGCCGCAGGCGGGGAATCCTGTGAAACAGAATTCTTTTTATGTTATTTTTCTGACCGGCTGTACTTCA ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTT 164 TTerm_1037 NZ_LR027880.1 2992992 2993004 13 2993011 2993023 13 6 100 0 26 69 30 69 30 0 2993007 AAAAACACCAGTA TACTGGTGTTTTT True CGCATAATA TTGATTCAT True True - AAAAACACCAGTA TGACGG TACTGGTGTTTTT TATTATGCG 76 RIL182_RS14220 intergenic 2992939 2993156 - down ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAA TGAAGTACAGCCGGTCAGAAAAATAACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTTTATTATGCGGCTGGGTTAAGGCCGCATATATGTTTTTATCTATGTTTCAAAAATTAAGCTAAACCGTTAACAAGTTTT ACATAAAAAGAATTCTGTTTCACAGGATTCCCCGCCTGCGGCGGGTCGCTTTGCGACATAATTCATCTCCGACGCAGTGCGATCCCGCCCGGAGGGCTTTTTGATTCATAGGACGTAAATTCCTATGAATCAAAAAAACACCAGTATGACGGTACTGGTGTTTT 164 TTerm_1038 NZ_LR027880.1 3008815 3008836 22 3008841 3008862 22 4 90 0 34 68 31 70 30 0 3008838 TATGAAGTAAAAAAACAGGAGC GCCCCTGTTTTTTTACTTTATA True CAATTTCCT CTGCCTTGT True True - TATAAAGTAAAAAAACAGGGGC ATAA GCTCCTGTTTTTTTACTTCATA AGGAAATTG 108 RIL182_RS14280 intergenic 3008767 3008926 + down TCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATACTGCCTTGTTCTACCATCCATGAAAGGACCTGATTGTGACTGTGCCTCTGACATCTATGATTCT TGAGAAAAATAAATATGAGGACTAATCACAGGATGTGATTATGGTTCTATTAATTCATAGCGGACAATTTCCTATGAAGTAAAAAAACAGGAGCTTATGCCCCTGTTTTTTTACTTTATACTGCCTTGTTCTACCATCCATGAAAGGACCTGATTGTGACTGTGCCTCTGACATCTATGATTCTCACTGTCTCAGTGCTTCTACCAACA AGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCAT 111 TTerm_1039 NZ_LR027880.1 3008815 3008836 22 3008841 3008862 22 4 90 0 34 68 31 70 30 0 3008838 TATGAAGTAAAAAAACAGGAGC GCCCCTGTTTTTTTACTTTATA True CAATTTCCT CTGCCTTGT True True - TATAAAGTAAAAAAACAGGGGC ATAA GCTCCTGTTTTTTTACTTCATA AGGAAATTG 108 RIL182_RS14285 intergenic 3008767 3008926 - down AGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCATAGGAAATTGTCCGCTATGAATTAATAGAACCATAATCACATCCTGTGA TGTTGGTAGAAGCACTGAGACAGTGAGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCATAGGAAATTGTCCGCTATGAATTAATAGAACCATAATCACATCCTGTGATTAGTCCTCATATTTATTTTTCTCA AGAATCATAGATGTCAGAGGCACAGTCACAATCAGGTCCTTTCATGGATGGTAGAACAAGGCAGTATAAAGTAAAAAAACAGGGGCATAAGCTCCTGTTTTTTTACTTCAT 111 TTerm_1040 NZ_LR027880.1 3023334 3023342 9 3023351 3023359 9 8 88 0 13 38 61 37 62 0 3023346 CAGAGCCAG CTGACTCTG True GCAAAAATC CTCCACTCT True False - CAGAGTCAG TCGGAAGG CTGGCTCTG GATTTTTGC 50 RIL182_RS14350 intergenic 3023133 3023441 - down AGGATAGATGTTGTAAATATAGTTGGTATTTTCCGCCAGTTAGAGAATTATCAGAGTAAATTATAATATGATTAGAGTGGAGCAGAGTCAGTCGGAAGGCTGGCTCTGATTTTTGCCCTTTTTTGCAGACTGGTGTGAATAACGGTGTAGTTTATGTAACTTTCTACGAAGATTTCATTGTTTCTGATGTTTAAATGGAAAATGTAAAAATGTTCTTGATATGAGAACTGGAGTATGATATTTTATAAATAGAACGTGCGTTCGTGTTCGAGAATAGGGGAAACATAATTGACGAGTGGGGGAAGATA AGCTGGCGAAGATGAATGAGAATTAAGGATAGATGTTGTAAATATAGTTGGTATTTTCCGCCAGTTAGAGAATTATCAGAGTAAATTATAATATGATTAGAGTGGAGCAGAGTCAGTCGGAAGGCTGGCTCTGATTTTTGCCCTTTTTTGCAGACTGGTGTGAATAACGGTGTAGTTTATGTAACTTTCTACGAAGATTTCATTGTTTCTGATGTTTAAATGGAAAATGTAAAAATGTTCTTGATATGAGAACTGGAGTATGATATTTTATAAATAGAACGTGCGTTCGTGTTCGAGAATAGGGGAAACATAATTGACGAGTGGGGGAAGATAATGAAAATTGAAAACATTATGAAAA AGGATAGATGTTGTAAATATAGTTGGTATTTTCCGCCAGTTAGAGAATTATCAGAGTAAATTATAATATGATTAGAGTGGAGCAGAGTCAGTCGGAAGGCTGGCTCT 107 TTerm_1041 NZ_LR027880.1 3026407 3026418 12 3026424 3026435 12 5 91 0 19 62 37 63 36 0 3026420 AAGGTTGAGATT AACCTCAACCTT True TCTAAAAAA ATCTTTAAC True False - AAGGTTGAGGTT TATTT AATCTCAACCTT TTTTTTAGA 62 RIL182_RS14365 intergenic 3026302 3026461 - down GTACGCAAGTGAACATGGTTAAAGATAAGGTTGAGGTTTATTTAATCTCAACCTTTTTTTAGAGCGTCGGATGATTTTATTCGTTAATTTCGTGAAAACCGACAGGAATGGAAAACAGTGTGAAAATCTTCTTTTTCACACATAAGAATGGAGATTAAC ACAAGAAGTACGGCATTAACAAATAGTACGCAAGTGAACATGGTTAAAGATAAGGTTGAGGTTTATTTAATCTCAACCTTTTTTTAGAGCGTCGGATGATTTTATTCGTTAATTTCGTGAAAACCGACAGGAATGGAAAACAGTGTGAAAATCTTCTTTTTCACACATAAGAATGGAGATTAACATGAGATATTCCGGGATTGGCGGAC GTACGCAAGTGAACATGGTTAAAGATAAGGTTGAGGTTTATTTAATCTCAACCT 54 TTerm_1042 NZ_LR027880.1 3065803 3065817 15 3065827 3065841 15 9 100 0 30 60 40 60 40 0 3065821 GCAAAAAGACGATTC GAATCGTCTTTTTGC True GATTACAAG CTTACTATT True True - GCAAAAAGACGATTC TGACAAAAG GAATCGTCTTTTTGC CTTGTAATC 84 RIL182_RS14525 intergenic 3065670 3065869 - down AAACAGACAGTAAAGACATAATAGTAAGGCAAAAAGACGATTCTGACAAAAGGAATCGTCTTTTTGCTTGTAATCTGGAAAAGCTGTGATATAATACAAACAAAAGTTAGATAACACTAACAAAAGTAAGGAAAGACTTTAATACCATTCAGAATAGATAAGGATATAAGAACAATTCCGTAATGGGAAAGGGGAGCAT CAGAAATAGAACAATATTTACAGTGAAACAGACAGTAAAGACATAATAGTAAGGCAAAAAGACGATTCTGACAAAAGGAATCGTCTTTTTGCTTGTAATCTGGAAAAGCTGTGATATAATACAAACAAAAGTTAGATAACACTAACAAAAGTAAGGAAAGACTTTAATACCATTCAGAATAGATAAGGATATAAGAACAATTCCGTAATGGGAAAGGGGAGCATATGTCAGAAGAAGAAAGAAAATTTT AAACAGACAGTAAAGACATAATAGTAAGGCAAAAAGACGATTCTGACAAAAGGAATCGTCTTTTTG 66 TTerm_1043 NZ_LR027880.1 3067025 3067041 17 3067046 3067062 17 4 82 0 19 52 47 50 50 0 3067043 AAGTTACTGTTCACAGG CCTGCGGACTGTAACTT True CAAAAACAA CGCAGCCCC True False - AAGTTACAGTCCGCAGG GTAA CCTGTGAACAGTAACTT TTGTTTTTG 78 RIL182_RS14530 intergenic 3066759 3067271 - down GAAAAATTTAAAGTGTGTAACTGTCAGAAAATGACAGGGAAGACAGTGTCCGGATTGATATTCAGCCGGACACTGTCTTTCTTTAAAAATAGCAGCTTGTTTTGTTACTGTTCACTCGGCACCTGAACACTTTGCTGTTCAGGTGCGTATGAACGTGATGTGGGGGTGAGCAGCCCCTTTTGCGAAGCAAAACTTTACATGGGGCTGCGAAGTTACAGTCCGCAGGGTAACCTGTGAACAGTAACTTTGTTTTTGTACAACCTGCACAAGAAATTTCAAATTGGTTGCATACTAAGGATGACGTATGATAAAATAACTCAAAGCATATTTCTACGATGCAGACATCTATCCGGTGCTATAATTACGAATCCGGCAATTCTGTCTGTATGACTATCAGGATGTATATATCCGTCTAAAATTCAAAAAAACATTTCAGAAATCTATGCTTTTTATCCACAGAAATGAAAAGCAGGAGATCTGGATGAGCCTCCTGCACACAGGAGGAACTGAAT TGAAAAAAGTTAAGGTCAGTAAATAGAAAAATTTAAAGTGTGTAACTGTCAGAAAATGACAGGGAAGACAGTGTCCGGATTGATATTCAGCCGGACACTGTCTTTCTTTAAAAATAGCAGCTTGTTTTGTTACTGTTCACTCGGCACCTGAACACTTTGCTGTTCAGGTGCGTATGAACGTGATGTGGGGGTGAGCAGCCCCTTTTGCGAAGCAAAACTTTACATGGGGCTGCGAAGTTACAGTCCGCAGGGTAACCTGTGAACAGTAACTTTGTTTTTGTACAACCTGCACAAGAAATTTCAAATTGGTTGCATACTAAGGATGACGTATGATAAAATAACTCAAAGCATATTTCTACGATGCAGACATCTATCCGGTGCTATAATTACGAATCCGGCAATTCTGTCTGTATGACTATCAGGATGTATATATCCGTCTAAAATTCAAAAAAACATTTCAGAAATCTATGCTTTTTATCCACAGAAATGAAAAGCAGGAGATCTGGATGAGCCTCCTGCACACAGGAGGAACTGAATATGAAGAAGAGTGAGCAGGTATCAG GAAAAATTTAAAGTGTGTAACTGTCAGAAAATGACAGGGAAGACAGTGTCCGGATTGATATTCAGCCGGACACTGTCTTTCTTTAAAAATAGCAGCTTGTTTTGTTACTGTTCACTCGGCACCTGAACACTTTGCTGTTCAGGTGCGTATGAACGTGATGTGGGGGTGAGCAGCCCCTTTTGCGAAGCAAAACTTTACATGGGGCTGCGAAGTTACAGTCCGCAGGGTAACCTGTGAACAGTAACT 246 TTerm_1044 NZ_LR027880.1 3073208 3073226 19 3073233 3073251 19 6 100 0 38 73 26 73 26 0 3073229 TATAAAGAAAAGACGATTC GAATCGTCTTTTCTTTATA True TCACTATAT ATATATGCT True True - TATAAAGAAAAGACGATTC TGAGTG GAATCGTCTTTTCTTTATA ATATAGTGA 100 RIL182_RS14540 intergenic 3073164 3073260 + down TATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATAATATATGCT GGTTGGACGGGTTGATACGAAGTAATATAATACACAAAATGCCTACTCCGCAGACATTGATCACTATATATAAAGAAAAGACGATTCCACTCAGAATCGTCTTTTCTTTATAATATATGCTTATTTTTTCCCACGCAGCAGCTTAA AGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTAT 52 TTerm_1045 NZ_LR027880.1 3073208 3073226 19 3073233 3073251 19 6 100 0 38 73 26 73 26 0 3073229 TATAAAGAAAAGACGATTC GAATCGTCTTTTCTTTATA True TCACTATAT ATATATGCT True True - TATAAAGAAAAGACGATTC TGAGTG GAATCGTCTTTTCTTTATA ATATAGTGA 100 RIL182_RS14545 intergenic 3073164 3073260 - down AGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTATATATAGTGATCAATGTCTGCGGAGTAGGCATTTTGTGTATTATA TTAAGCTGCTGCGTGGGAAAAAATAAGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTATATATAGTGATCAATGTCTGCGGAGTAGGCATTTTGTGTATTATATTACTTCGTATCAACCCGTCCAACC AGCATATATTATAAAGAAAAGACGATTCTGAGTGGAATCGTCTTTTCTTTAT 52 TTerm_1046 NZ_LR027880.1 3085934 3085942 9 3085952 3085960 9 9 100 0 18 55 44 55 44 0 3085946 AAGAACAGG CCTGTTCTT True GCAAAAAAA CTATCGTCG True False - AAGAACAGG TGATGGATG CCTGTTCTT TTTTTTTGC 60 RIL182_RS14600 intergenic 3085832 3086418 - down AGATCGCTGCAAACCTGAATAGAAAATAAAAATATCCTAAAATGAAATAAAAAAGAAAATACCAGAATTTTACAGAATACGTTATTGCATTTGCCATGTGTGTATGCTATACTTCAAATCACATGAATGCGAAAATTGTTTTCATGCAAATATTCGTTACAATAGATGGAAAAGGATCTATTGTTTGCCCACCAAGAGATTGGTTAAGCCCATACGGACAGGCGGGGCAACTGCCGATTGCGGTGTAAGCCGCGTTATTGATTGAGTTAGAAGCTCAAATTTTATAAGTTGATTACGGGGATGATACCCGGAATCCAATATCACTTGTGAAACGGTCAATAAGAGTAGTATACGCAAATATTTGCTGGCAAAGATGCCAACGCGGACTCTGGAGAAAATAGTTTTTGCAGAATGTAGATAGATTACATAAAGTATGACTATGATGATAACGACGATAGAAGAACAGGTGATGGATGCCTGTTCTTTTTTTTGCGTTTTTCAGCCTGACGGTAATGTCAGGGAAAAACATTTGATGAAAAGCAGAGCATGCAGATTTTTATGGAAGCCAAGGGGGATTTTTTTAGTC AGATCGCTGCAAACCTGAATAGAAAATAAAAATATCCTAAAATGAAATAAAAAAGAAAATACCAGAATTTTACAGAATACGTTATTGCATTTGCCATGTGTGTATGCTATACTTCAAATCACATGAATGCGAAAATTGTTTTCATGCAAATATTCGTTACAATAGATGGAAAAGGATCTATTGTTTGCCCACCAAGAGATTGGTTAAGCCCATACGGACAGGCGGGGCAACTGCCGATTGCGGTGTAAGCCGCGTTATTGATTGAGTTAGAAGCTCAAATTTTATAAGTTGATTACGGGGATGATACCCGGAATCCAATATCACTTGTGAAACGGTCAATAAGAGTAGTATACGCAAATATTTGCTGGCAAAGATGCCAACGCGGACTCTGGAGAAAATAGTTTTTGCAGAATGTAGATAGATTACATAAAGTATGACTATGATGATAACGACGATAGAAGAACAGGTGATGGATGCCTGTTCT 484 TTerm_1047 NZ_LR027880.1 3091259 3091267 9 3091272 3091280 9 4 88 0 13 38 61 37 62 0 3091269 AACCGACTC GAGCCGGTT True ATTAAAAAA CGTAAATTC True False - AACCGGCTC ATCA GAGTCGGTT TTTTTTAAT 66 RIL182_RS14620 intergenic 3091152 3091547 - down ACAGTAGAAATAGATGGTGCTATGATTGCTAAAAGATACATATTGCTTGATAGAGGTTGCGTGCTTTAAGAGTAGTTTTCCGGATGTGGCAGAAGCAGAGGATGGAGGATAAAAGGAAAGAACGCCGAAGGAGTATATTTGCTGCGGATATGTTCCTGGGCATAAGGTAAAGAACCTTATGACTGTCATCTTAAGCTGAAATGGCAGAAAGATGGGGCGCTATCGGATTCGACATATACTGGGTAATACATATGATTAGAATTTACGAACCGGCTCATCAGAGTCGGTTTTTTTAATTCATAGGGAAATTACGTCCTATGAATAAATAAAATACCGTGTGCACAAAGCAGTGTATCCTAACGTATCATAATACAGGAACCAGGAGGATTATTAAT TTGATTTTTTAGAGGAATTGGATTGACAGTAGAAATAGATGGTGCTATGATTGCTAAAAGATACATATTGCTTGATAGAGGTTGCGTGCTTTAAGAGTAGTTTTCCGGATGTGGCAGAAGCAGAGGATGGAGGATAAAAGGAAAGAACGCCGAAGGAGTATATTTGCTGCGGATATGTTCCTGGGCATAAGGTAAAGAACCTTATGACTGTCATCTTAAGCTGAAATGGCAGAAAGATGGGGCGCTATCGGATTCGACATATACTGGGTAATACATATGATTAGAATTTACGAACCGGCTCATCAGAGTCGGTTTTTTTAATTCATAGGGAAATTACGTCCTATGAATAAATAAAATACCGTGTGCACAAAGCAGTGTATCCTAACGTATCATAATACAGGAACCAGGAGGATTATTAATATGTCTATTTTTAAAGGAGCCGGTG ACAGTAGAAATAGATGGTGCTATGATTGCTAAAAGATACATATTGCTTGATAGAGGTTGCGTGCTTTAAGAGTAGTTTTCCGGATGTGGCAGAAGCAGAGGATGGAGGATAAAAGGAAAGAACGCCGAAGGAGTATATTTGCTGCGGATATGTTCCTGGGCATAAGGTAAAGAACCTTATGACTGTCATCTTAAGCTGAAATGGCAGAAAGATGGGGCGCTATCGGATTCGACATATACTGGGTAATACATATGATTAGAATTTACGAACCGGCTCATCAGAGTCGGT 288 TTerm_1048 NZ_LR027880.1 3094323 3094339 17 3094348 3094364 17 8 94 0 29 73 26 75 25 0 3094343 AAAAAGATGATTTGTAC GTACGAATCATCTTTTT True CACTAACAA GTTTATGGC True True - AAAAAGATGATTCGTAC CTGCGGGA GTACAAATCATCTTTTT TTGTTAGTG 82 RIL182_RS14625 intergenic 3094309 3094412 + down TTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTTGTTTATGGCAGCACTTTTTCTCACAATCTGTAATATTTATTATTTTCT CAAACGTGCTAATATGAAAAAATAATTTTTCACTAACAAAAAAGATGATTTGTACTCCCGCAGGTACGAATCATCTTTTTGTTTATGGCAGCACTTTTTCTCACAATCTGTAATATTTATTATTTTCTCACGACTGTTCTTCCATATCGGCAT AGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTT 89 TTerm_1049 NZ_LR027880.1 3094323 3094339 17 3094348 3094364 17 8 94 0 29 73 26 75 25 0 3094343 AAAAAGATGATTTGTAC GTACGAATCATCTTTTT True CACTAACAA GTTTATGGC True True - AAAAAGATGATTCGTAC CTGCGGGA GTACAAATCATCTTTTT TTGTTAGTG 82 RIL182_RS14630 intergenic 3094309 3094412 - down AGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTTTTGTTAGTGAAAAA ATGCCGATATGGAAGAACAGTCGTGAGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTTTTGTTAGTGAAAAATTATTTTTTCATATTAGCACGTTTG AGAAAATAATAAATATTACAGATTGTGAGAAAAAGTGCTGCCATAAACAAAAAGATGATTCGTACCTGCGGGAGTACAAATCATCTTTT 89 TTerm_1050 NZ_LR027880.1 3131364 3131374 11 3131383 3131393 11 8 81 0 12 90 9 100 0 0 3131378 AAAATTAACAA TTTTTAATGTT True CATATGAAA ACTTTTACT True True - AACATTAAAAA TGTTAATC TTGTTAATTTT TTTCATATG 24 RIL182_RS14780 intergenic 3131178 3131487 - down AACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGT AAGCGATAGAGTTGTCCATATTGTAAACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTTTTTCATATGTATTTGAACCTCGTTTCTATTAATTTAAAAAGATTATATTATAGATATTGCGGAAAGACCATGTCAAAACTGGAAAAACTTTTTTTCCAGTTTTGACATGGTCTTTTAGTGATTTAAAGATTAAAGTAAATGATGTCAACAGAAATAAAATATTACAGTAATGAAAGTGAAAAAAGTATGGATATAGAAACAATAAAAAAAG AACATCTATATAAGGTAAATCATCATTTATGGGCATAATGATTTGAGATGTATTTTTTCCCAGGGAAACATTTGTTTTTAATGTAAGTAAAAGTAACATTAAAAATGTTAATCTTGTTAATTT 123 TTerm_1051 NZ_LR027880.1 3138143 3138155 13 3138160 3138172 13 4 92 0 21 53 46 50 50 0 3138157 AAAATGCCGTCCA TGGTCGGCATTTT True TGAATTATA TTGTTATTC True True - AAAATGCCGACCA GGAA TGGACGGCATTTT TATAATTCA 74 RIL182_RS14805 intergenic 3137772 3138182 + down TACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTTTTGTTATTCT TCTTGAAATGTTTTATCAACACTAATACTTTATAATTCATAGGACGTAATTTCCTATGAAGATTCGGGGTGTCAAAAGGTGGCTCACAACTTAGCTGCTGGCAAACTGCACAAATCCGGGACTGTTTTTGTGACTTTAGTAGAAAATTAGTAAATCTTAGTATGCCTGTCTATTTACAGTAATGTTCTGCCACGGACGGCAGAACAAGGCTTCGCGAGCCATGGAAGGCTCGTTGAATGCCGTTTACGTCACTCTGTGAAAAACTGATTCAGGCATACTTAGTTTTTCTTATTTTCGGACAACGGAACAAAACAAGTTCGGTTTTGTGCAATTTGACAGACCCAAAATTGAAAACCACCTTTTGACACCCGAATCCTATGAATCTTATGAATTATAAAATGCCGTCCATTCCTGGTCGGCATTTTTTGTTATTCTTATGTAAGTAAACTAAGTATCATCT AGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTT 39 TTerm_1052 NZ_LR027880.1 3138143 3138155 13 3138160 3138172 13 4 92 0 21 53 46 50 50 0 3138157 AAAATGCCGTCCA TGGTCGGCATTTT True TGAATTATA TTGTTATTC True True - AAAATGCCGACCA GGAA TGGACGGCATTTT TATAATTCA 74 RIL182_RS14810 intergenic 3137772 3138182 - down AGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTTTATAATTCATAAGATTCATAGGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTCTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGCGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTACTAATTTTCTACTAAAGTCACAAAAACAGTCCCGGATTTGTGCAGTTTGCCAGCAGCTAAGTTGTGAGCCACCTTTTGACACCCCGAATCTTCATAGGAAATTACGTCCTATGAATTATAAAGTA AGATGATACTTAGTTTACTTACATAAGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTTTATAATTCATAAGATTCATAGGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTCTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGCGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTACTAATTTTCTACTAAAGTCACAAAAACAGTCCCGGATTTGTGCAGTTTGCCAGCAGCTAAGTTGTGAGCCACCTTTTGACACCCCGAATCTTCATAGGAAATTACGTCCTATGAATTATAAAGTATTAGTGTTGATAAAACATTTCAAGA AGAATAACAAAAAATGCCGACCAGGAATGGACGGCATTT 39 TTerm_1053 NZ_LR027880.1 3152492 3152504 13 3152510 3152522 13 5 92 0 21 57 42 58 41 0 3152506 CGGATGATATTTC GAAATACCATCCG True TCAAAAAAC GCCTGTCAT True False - CGGATGGTATTTC AAAGC GAAATATCATCCG GTTTTTTGA 50 RIL182_RS14870 intergenic 3152399 3152537 - down AATAATATGACAGGCCGGATGGTATTTCAAAGCGAAATATCATCCGTTTTTTGAATGATGGCACAAAGAAGATTAGATTTTAGGTGTGATTTGTTTCAGGTTCTGTCAGAATAAATGCAGATAAAGGAGAAAAATACA CACATAAACATATTAAAAAAGGTTAAATAATATGACAGGCCGGATGGTATTTCAAAGCGAAATATCATCCGTTTTTTGAATGATGGCACAAAGAAGATTAGATTTTAGGTGTGATTTGTTTCAGGTTCTGTCAGAATAAATGCAGATAAAGGAGAAAAATACAATGATTCAGGATATATTTCCGATGC AATAATATGACAGGCCGGATGGTATTTCAAAGCGAAATATCATCC 45 TTerm_1054 NZ_LR027880.1 3166022 3166043 22 3166048 3166069 22 4 100 0 44 72 27 72 27 0 3166045 AAAAGAGGCATTTGAAAAATGA TCATTTTTCAAATGCCTCTTTT True GTGATTCCA CCTTCTTCC True True - AAAAGAGGCATTTGAAAAATGA TTTT TCATTTTTCAAATGCCTCTTTT TGGAATCAC 96 RIL182_RS14920 intergenic 3165972 3166048 + down CCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAAT GTTTTATATGGGAGATCACCGTTAACCTCTATAGCAGCCATATCTTTTACACCTTATAAGTAATCTGTGATTCCAAAAGAGGCATTTGAAAAATGAAAAATCATTTTTCAAATGCCTCTTTTCCTT ATTTTTCATTTTTCAAATGCCTCTTT 26 TTerm_1055 NZ_LR027880.1 3166022 3166043 22 3166048 3166069 22 4 100 0 44 72 27 72 27 0 3166045 AAAAGAGGCATTTGAAAAATGA TCATTTTTCAAATGCCTCTTTT True GTGATTCCA CCTTCTTCC True True - AAAAGAGGCATTTGAAAAATGA TTTT TCATTTTTCAAATGCCTCTTTT TGGAATCAC 96 RIL182_RS14925 intergenic 3165972 3166048 - down ATTTTTCATTTTTCAAATGCCTCTTTTGGAATCACAGATTACTTATAAGGTGTAAAAGATATGGCTGCTATAGAGG AAGGAAAAGAGGCATTTGAAAAATGATTTTTCATTTTTCAAATGCCTCTTTTGGAATCACAGATTACTTATAAGGTGTAAAAGATATGGCTGCTATAGAGGTTAACGGTGATCTCCCATATAAAAC ATTTTTCATTTTTCAAATGCCTCTTT 26 TTerm_1056 NZ_LR027880.1 3182243 3182251 9 3182257 3182265 9 5 88 0 13 88 11 87 12 0 3182253 AAATATTGT ACATTATTT True CAATCTTAA CTTTTGAAA True True - AAATAATGT GTGAT ACAATATTT TTAAGATTG 34 RIL182_RS14985 intergenic 3182215 3182310 - down AATGCACTATTTGACTCCAACCCGCAGGATAACATTTTTCAAAAGAAATAATGTGTGATACAATATTTTAAGATTGAATTTTCAGGAGAAAACAG AAAAATTTGTCAATCAAGAAGTTTAAATGCACTATTTGACTCCAACCCGCAGGATAACATTTTTCAAAAGAAATAATGTGTGATACAATATTTTAAGATTGAATTTTCAGGAGAAAACAGATGTCCCTACAATTTATATTTGGCA AATGCACTATTTGACTCCAACCCGCAGGATAACATTTTTCAAAAGAAATAATGTGTGATACAATATT 67 TTerm_1057 NZ_LR027880.1 3190346 3190363 18 3190369 3190387 19 5 84 5 16 67 32 68 31 0 3190365 AATAAGAACCAGTAAGAG CTCTTATCTGATTCCTATT True TTCAAAAAA ATAAAGACC True False - AATAGGAATCAGATAAGAG ATAAA CTCTTACTGGTTCTTATT TTTTTTGAA 48 RIL182_RS15050 intergenic 3190162 3190439 - down AGAACAAAAATTCGATATGCAAGGTGTGTTTATGGGACACCCAGGTCTTTATAATAGGAATCAGATAAGAGATAAACTCTTACTGGTTCTTATTTTTTTGAAATAAACGAAGTGTGTAAAAATGATGGAACATTAGAATAGGAGGTGCCTATGGGAACAGATTGAAGAACAGGAAGAAAATATTAAGGATGAATTTGTTTCGCCAATAAAGGAACTCACATACGATGAGGTAACAGAGCCGATTGAAAAGAATGTTGCATCGTATGAATTGTCAGAA GATTGATAAAACAATATAAAAAATGAGAACAAAAATTCGATATGCAAGGTGTGTTTATGGGACACCCAGGTCTTTATAATAGGAATCAGATAAGAGATAAACTCTTACTGGTTCTTATTTTTTTGAAATAAACGAAGTGTGTAAAAATGATGGAACATTAGAATAGGAGGTGCCTATGGGAACAGATTGAAGAACAGGAAGAAAATATTAAGGATGAATTTGTTTCGCCAATAAAGGAACTCACATACGATGAGGTAACAGAGCCGATTGAAAAGAATGTTGCATCGTATGAATTGTCAGAAATGGACTGGGCAGAATATCTTACAC AGAACAAAAATTCGATATGCAAGGTGTGTTTATGGGACACCCAGGTCTTTATAATAGGAATCAGATAAGAGATAAACTCTTACTGGTTCTTAT 93 TTerm_1058 NZ_LR027880.1 3210420 3210425 6 3210431 3210436 6 5 100 0 12 100 0 100 0 0 3210427 ATTTTT AAAAAT True AAAAGTGTA GTGTATTTT True True - ATTTTT CCAAA AAAAAT TACACTTTT 24 RIL182_RS15140 intergenic 3210260 3210446 - down AAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAA CGGTAAGAACAGAAAGCAGTTCATAAAAAATACACATTTTTCCAAAAAAAATACACTTTTTTACCGAAATATATGAAAGCTGTTCACAATTTAGTAAAAAATTATACTTAATTCAAATTTAATTCGGTATTCATAAAAACCTCTCACAGTTATAATTAGACCATGGTTAGCAACGAAACCAAATCTAAAAAAACTATGGGAGGTTTTTGAAATGAAAAGAAAATTGGTGAGTATGG AAAAATACACATTTTTCCAAAAAAAA 26 TTerm_1059 NZ_LR027880.1 3220090 3220105 16 3220111 3220126 16 5 93 0 27 78 21 80 20 0 3220107 AAGATGCAAAAAAATT AATTTTTCTGCATCTT True ATAGAAAAA CGCATTTTT True True - AAGATGCAGAAAAATT AATGA AATTTTTTTGCATCTT TTTTTCTAT 54 RIL182_RS15160 intergenic 3219864 3220198 - down GATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAG ATGATCTGGCAGGCATGGAAGCATAGATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCTTTTTTCTATTGAATTGTTTGTATGGATATTATTTTAAGAGAAAATAAATAAAAAAGACAGATAATATACATGTATTATATATAATTATCATATTATCAGATAATATGAAGAAAAAACAGGTAGACAAACGGATATGAAAGTTGTATATTAATACATAACAAATCCGACAAAAGACAACTGTTTTTCAGGCAAAGACAGATGAGTGGATGGAGAAAGGAAGTTGAAGATGAAAGAGCAGAAATTAGACCGTT GATCTGCAGGTAAAAGAGCGGAAAGACACAGATACAATTTAAACACAATTTAATAGAAATAATAAAAATGCGAAGATGCAGAAAAATTAATGAAATTTTTTTGCATCT 108 TTerm_1060 NZ_LR027880.1 3228655 3228667 13 3228672 3228684 13 4 100 0 26 61 38 61 38 0 3228669 AAAACTGGGTACA TGTACCCAGTTTT True GACGAACAA ATTTTAAAT True True - AAAACTGGGTACA GTGA TGTACCCAGTTTT TTGTTCGTC 76 RIL182_RS15200 intergenic 3228573 3228718 - down ATTCGGTAAAATTAAACAGAACATCATTTAAAATAAAACTGGGTACAGTGATGTACCCAGTTTTTGTTCGTCAGTAAGGATGAAATTATAGATCGGATGATGGGTGGAACTAGACGAAGGGGAGATATCGGAAAGGAAATAGATT AAACAGAATTGACAATTACCAACTAATTCGGTAAAATTAAACAGAACATCATTTAAAATAAAACTGGGTACAGTGATGTACCCAGTTTTTGTTCGTCAGTAAGGATGAAATTATAGATCGGATGATGGGTGGAACTAGACGAAGGGGAGATATCGGAAAGGAAATAGATTATGATTTCAAACCATAAAATACAGA ATTCGGTAAAATTAAACAGAACATCATTTAAAATAAAACTGGGTACAGTGATGTACCCAGTTT 63 TTerm_1061 NZ_LR027880.1 3260460 3260466 7 3260471 3260477 7 4 100 0 14 100 0 100 0 0 3260468 AATTTTT AAAAATT True CAAAATCCA TTTTCATTT True True - AATTTTT CGCT AAAAATT TGGATTTTG 28 RIL182_RS15360 intergenic 3260355 3260563 - down AGGCATTTGAAAACATAAATGGCAGAAAATAGAAAATTCCATAAGTTCCTGGAATGATAAAAATAACCTCCGCTTATAAATGAAAAAATTTTTCGCTAAAAATTGGATTTTGGGTGAAATACGGCGAAAATTGCATTGACGGAAAAATTTCTCTATGCTAAATTTACTCATGTATTTCTATCAAGTAGTGATACAGGAGGATGAAAAA GAGGAATTATAAAAATCTTTCGTTAAGGCATTTGAAAACATAAATGGCAGAAAATAGAAAATTCCATAAGTTCCTGGAATGATAAAAATAACCTCCGCTTATAAATGAAAAAATTTTTCGCTAAAAATTGGATTTTGGGTGAAATACGGCGAAAATTGCATTGACGGAAAAATTTCTCTATGCTAAATTTACTCATGTATTTCTATCAAGTAGTGATACAGGAGGATGAAAAAATGAAGAAAGCATTAAGCGTATTAT AGGCATTTGAAAACATAAATGGCAGAAAATAGAAAATTCCATAAGTTCCTGGAATGATAAAAATAACCTCCGCTTATAAATGAAAAAATTTTTCGCTAAAAAT 103 TTerm_1062 NZ_LR027880.1 3275349 3275358 10 3275363 3275372 10 4 90 0 15 20 80 11 88 0 3275360 ACCGGCAGGG CCCAGCCGGT True GTAAAACAA CTATTGGAT True False - ACCGGCTGGG GTAT CCCTGCCGGT TTGTTTTAC 70 RIL182_RS15440 intergenic 3275328 3275381 + down TGCCCTGTAAAAGTAAAACAACCGGCAGGGATACCCCAGCCGGTCTATTGGAT AATCATAGAATGCACGCTCCGCTAATGCCCTGTAAAAGTAAAACAACCGGCAGGGATACCCCAGCCGGTCTATTGGATTACAATACTTTGGATAAAAATTCCT ATCCAATAGACCGGCTGGGGTATCCCTGCCGG 32 TTerm_1063 NZ_LR027880.1 3275349 3275358 10 3275363 3275372 10 4 90 0 15 20 80 11 88 0 3275360 ACCGGCAGGG CCCAGCCGGT True GTAAAACAA CTATTGGAT True False - ACCGGCTGGG GTAT CCCTGCCGGT TTGTTTTAC 70 RIL182_RS15445 intergenic 3275328 3275381 - down ATCCAATAGACCGGCTGGGGTATCCCTGCCGGTTGTTTTACTTTTACAGGGCA AGGAATTTTTATCCAAAGTATTGTAATCCAATAGACCGGCTGGGGTATCCCTGCCGGTTGTTTTACTTTTACAGGGCATTAGCGGAGCGTGCATTCTATGATT ATCCAATAGACCGGCTGGGGTATCCCTGCCGG 32 TTerm_1064 NZ_LR027880.1 3282978 3282993 16 3282998 3283013 16 4 87 0 22 56 43 57 42 0 3282995 AAAACAGACAGAACCA TGGTTCTGCCCGTTTT True AATATGCTA TATTTTACC True True - AAAACGGGCAGAACCA CCTT TGGTTCTGTCTGTTTT TAGCATATT 68 RIL182_RS15485 intergenic 3282929 3283031 - down AGATTTAATGGTAAAATAAAAACGGGCAGAACCACCTTTGGTTCTGTCTGTTTTAGCATATTAAAACAAAAGAATGATCCACAATGGTGGACAGGAGACGAA CTATGGAGCGGATCCAGACACTGTAAGATTTAATGGTAAAATAAAAACGGGCAGAACCACCTTTGGTTCTGTCTGTTTTAGCATATTAAAACAAAAGAATGATCCACAATGGTGGACAGGAGACGAAATGGAATACTGTAAATTACAGATTG AGATTTAATGGTAAAATAAAAACGGGCAGAACCACCTTTGGTTCTGTCTGTTT 53 TTerm_1065 NZ_LR027880.1 3287673 3287685 13 3287690 3287702 13 4 100 0 26 53 46 53 46 0 3287687 AAAAGCTGCAGTG CACTGCAGCTTTT True CAAACCAAA CGCTTACAT True True - AAAAGCTGCAGTG GAGA CACTGCAGCTTTT TTTGGTTTG 84 RIL182_RS15505 intergenic 3287187 3287715 - down GTAGATGTAAGCGAAAAGCTGCAGTGGAGACACTGCAGCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGC CAAAAGTAAAAGAGTTAGTAAAATAGTAGATGTAAGCGAAAAGCTGCAGTGGAGACACTGCAGCTTTTTTGGTTTGCGCGCCATGGGCGCGCTCTAATGGGTGAAAGTCCCGAACACGCCTAGGCAACGAGGAAGTGTATAGCAGAACAGCAAGGGTGTCCATCGTGAGGTGGAATCTGAAGGAAGCTGTAAGCAAACTCTTGGTCCGACGGACAGAAATCACATATAAGGCTCGGAAATACGGATAAGTCTGCCAAAAGAGATGAAGTCCTAAAGTTGCTGGAAGTACGAGTAGATGTGGCGGATAGATGAGAGGAAAGAGCGTGCACCTTAAGCGTGGAGGTCTCACAGGGGTTTCATTAGCCTAGTAACAACGAACTGTGAGAAGTCAGCCGAGCCCATAGTAGTGAAGAAGTCTCTGTAATGGAGATAGAGCAAAGGGGCGAACAATCAATAAGTTTGAGTATGTCTCGTATTGCAGAAGAGATAACATCTGCCGTAACCAATCGGGTAAAAGATGGTCAAATCAAGCGGGACGGAAAGGAAAGAACGCATGGACACAAGTAGTCTAATGGAGC GTAGATGTAAGCGAAAAGCTGCAGTGGAGACACTGCAGCTTT 42 TTerm_1066 NZ_LR027880.1 3289465 3289477 13 3289482 3289494 13 4 92 0 21 88 11 91 8 0 3289479 TGAAAAATCTTAT ATAAAATTTTTCA True CCTGCGTGT TTCTGTTAT True True - TGAAAAATTTTAT GAAA ATAAGATTTTTCA ACACGCAGG 42 RIL182_RS15520 intergenic 3289444 3289500 - down ACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTT AGAATGTTGTAATCTGGATCAAATAACAGAATGAAAAATTTTATGAAAATAAGATTTTTCACACGCAGGAATGGAGATTTTATGGAGAATTTACTTCAGGTAGGTG ACAGAATGAAAAATTTTATGAAAATAAGATTTTTC 35 TTerm_1067 NZ_LR027880.1 3299852 3299861 10 3299870 3299879 10 8 90 0 15 95 5 100 0 0 3299865 ATATAAAAAA TTTCTTATAT True CCAGTAAAA AATAACGGA True False - ATATAAGAAA ACAGAGTC TTTTTTATAT TTTTACTGG 38 RIL182_RS15570 intergenic 3299800 3299966 - down AATAAAAGATGACGTATGCCCTTGTTGAAGACAAAAGGGCGGTGCGCGATGTACCGTCTCTTGTCAGGCAAGGGCTTTTCCGTTATTATATAAGAAAACAGAGTCTTTTTTATATTTTACTGGATACACAGTAAGGTAGAAAAAAGCCCCTGACCAGGAGGATGAA AGCAGATCAAGAATGCTTTAAACTAAATAAAAGATGACGTATGCCCTTGTTGAAGACAAAAGGGCGGTGCGCGATGTACCGTCTCTTGTCAGGCAAGGGCTTTTCCGTTATTATATAAGAAAACAGAGTCTTTTTTATATTTTACTGGATACACAGTAAGGTAGAAAAAAGCCCCTGACCAGGAGGATGAAATGTCAAAGTTACAGGAATTGCAGA AATAAAAGATGACGTATGCCCTTGTTGAAGACAAAAGGGCGGTGCGCGATGTACCGTCTCTTGTCAGGCAAGGGCTTTTCCGTTATTATATAAGAAAACAGAGTCTTTTTTATA 114 TTerm_1068 NZ_LR027880.1 3303025 3303041 17 3303050 3303066 17 8 94 0 29 61 38 62 37 0 3303045 AAAACAGGTTTGTCAAG CTTGACAACCCTGTTTT True ACATAGTGA TTTATTTTT True True - AAAACAGGGTTGTCAAG AAAAAATA CTTGACAAACCTGTTTT TCACTATGT 82 RIL182_RS15595 intergenic 3302948 3303111 - down GGCAAAACAGCGGGTCTTTGAGGTTCATAGACGATGAAAAATAAAAAAACAGGGTTGTCAAGAAAAAATACTTGACAAACCTGTTTTCACTATGTATAATCATTTAGGTGTGAAAAGCCTAGATAAAAGGTTTGATTCACAAAAAAAGATATAGGAGAATGCC GAGAGACGGTTGCACTTGTAAAATAGGCAAAACAGCGGGTCTTTGAGGTTCATAGACGATGAAAAATAAAAAAACAGGGTTGTCAAGAAAAAATACTTGACAAACCTGTTTTCACTATGTATAATCATTTAGGTGTGAAAAGCCTAGATAAAAGGTTTGATTCACAAAAAAAGATATAGGAGAATGCCGTGATTATAGATATTTCAGACATTT GGCAAAACAGCGGGTCTTTGAGGTTCATAGACGATGAAAAATAAAAAAACAGGGTTGTCAAGAAAAAATACTTGACAAACCTGTTT 86 TTerm_1069 NZ_LR027880.1 3325266 3325283 18 3325288 3325304 17 4 88 5 19 65 34 62 37 0 3325285 GCCAGAAAAGAATTAAGT ACTTAAACTTTTCTGGC True GAAAAAGAG ATAAAAAAA True True - GCCAGAAAAGTTTAAGT GATA ACTTAATTCTTTTCTGGC CTCTTTTTC 46 RIL182_RS15665 intergenic 3325281 3325314 + down GTTATCACTTAAACTTTTCTGGCATAAAAAAAA AGAAAAAGAGCCAGAAAAGAATTAAGTTATCACTTAAACTTTTCTGGCATAAAAAAAAGCTGCTGACGGGAATCGGACCCGTG TTTTTTTTATGCCAGAAAAGTTTAAGTGATAACTTAATTCTTTTCTGG 48 TTerm_1070 NZ_LR027880.1 3325266 3325283 18 3325288 3325304 17 4 88 5 19 65 34 62 37 0 3325285 GCCAGAAAAGAATTAAGT ACTTAAACTTTTCTGGC True GAAAAAGAG ATAAAAAAA True True - GCCAGAAAAGTTTAAGT GATA ACTTAATTCTTTTCTGGC CTCTTTTTC 46 RIL182_RS15670 intergenic 3325281 3325314 - down TTTTTTTTATGCCAGAAAAGTTTAAGTGATAAC CACGGGTCCGATTCCCGTCAGCAGCTTTTTTTTATGCCAGAAAAGTTTAAGTGATAACTTAATTCTTTTCTGGCTCTTTTTCT TTTTTTTTATGCCAGAAAAGTTTAAGTGATAACTTAATTCTTTTCTGG 48 TTerm_1071 NZ_LR027880.1 3328480 3328491 12 3328496 3328507 12 4 91 0 19 37 62 36 63 0 3328493 ATCTCCTGCCGC GCGACAGGAGAT True GTCAAAAAA AGCATCTTC True False - ATCTCCTGTCGC GCTT GCGGCAGGAGAT TTTTTTGAC 70 RIL182_RS15685 intergenic 3328407 3328914 - down GAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGT CGAATCCTGAAATAGGGAAGATGTAGAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGTATGGAACAGTATACCACACAGATGG GAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGA 434 TTerm_1072 NZ_LR027880.1 3328698 3328709 12 3328714 3328725 12 4 100 0 24 66 33 66 33 0 3328711 AAAAAAGACAGC GCTGTCTTTTTT True TGTACAACA AGGAGAAGG True True - AAAAAAGACAGC AGTG GCTGTCTTTTTT TGTTGTACA 80 RIL182_RS15685 intergenic 3328407 3328914 - down GAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGT CGAATCCTGAAATAGGGAAGATGTAGAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTTTGTTGTACAAATATTGACAACCGTCACAGATTAGGCTAGACTGAACAAGTCGATAAAACTTAATAGAAAACAACGCAGAGGGACTGCATGTCCGGGAGAATGCCCGGAGGGATTGCAGTTGAGAAGGTTAAAACCTGACTCTTTGAACCTGTCAGTTAATACTGTCGTAGGGAGCGTATTGGGAAGATGCTATCTCCTGTCGCGCTTGCGGCAGGAGATTTTTTGACGTGGAGAATTCGTTTGCCAGACAGTGGTTCAAGCAGTCCCCCATGCGAAAAAGGAGAAAAACGTATGGAACAGTATACCACACAGATGG GAAGATTCGCCTTCTTTTTTGTAGATAGTCACGAAAAATACCTGTGCATATTGCATAAAAAATAAATGAGAAAATTGTAACATTTGTGAACACTTATTGAGAAAATCATGCTATTATAATCACTGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAAGACAGCAGTGGCTGTCTTTTT 216 TTerm_1073 NZ_LR027880.1 3332334 3332342 9 3332348 3332356 9 5 100 0 18 55 44 55 44 0 3332344 AATCCTCTG CAGAGGATT True AAAATGCGA TTACTCCTT True True - AATCCTCTG CTCAT CAGAGGATT TCGCATTTT 68 RIL182_RS15705 intergenic 3332297 3332388 - down AATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAA GTGCTGATGCACAAAAAACAAAATAAATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGATTCGCATTTTGCTTCGCAAAACAAGGAGGATTATTTAAATGGAAAATAAATTTCAATTTTACA AATTGCATTTTGTTCCGCAAAACAAGGAGTAAAATCCTCTGCTCATCAGAGGAT 54 TTerm_1074 NZ_LR027880.1 3339535 3339560 26 3339568 3339593 26 7 76 0 22 57 42 55 45 0 3339563 AAAATTGATATCCCCTGCTTTGCCTG CAGGCAGAACAGGGGCTTTTATTTTT True TGATACCCA TAAAGCGAA True True - AAAAATAAAAGCCCCTGTTCTGCCTG TGAATTC CAGGCAAAGCAGGGGATATCAATTTT TGGGTATCA 76 RIL182_RS15730 intergenic 3339397 3339627 - down AAAGTATAAATAAAATATCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTAT GTCCCGGACGTGCCTGTGGAAGATAAAAGTATAAATAAAATATCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTTTGGGTATCAAATTACTGTTTTTTTCTGTATAATCACTCAAAAAGGACACCTTTTATTGTATAATTATGTTATGGAACAAAACATACGAAAGAAGGTGTCCTGAATGAAAAATTAGCATTGAAGAAACTGCTAACTTATATGAAGAGTGTATATAAAATCCCGC AAAGTATAAATAAAATATCAGAGATTTCGCTTTAAAAAATAAAAGCCCCTGTTCTGCCTGTGAATTCCAGGCAAAGCAGGGGATATCAATTT 92 TTerm_1075 NZ_LR027880.1 3345785 3345797 13 3345807 3345819 13 9 100 0 26 76 23 76 23 0 3345801 ATTTATGAGAAAC GTTTCTCATAAAT True TTTGCAAAA GATTGCGTG True False - ATTTATGAGAAAC TCGGATTGG GTTTCTCATAAAT TTTTGCAAA 68 RIL182_RS15760 intergenic 3345644 3345932 - down ATCGCAGAGCTGCAGAAAAATATGCTGCTGTTTTCATACATTTTGAAAGCGGACAGCAGCGGTCATACTGGTATGATGTGATCCGGACGGTGGAAGGATTATATCACGCAATCATTTATGAGAAACTCGGATTGGGTTTCTCATAAATTTTGCAAAAAAATAATCAGTGCACCGGAAAAAAAGATTGCACAATGGGGCGATGTATGGTCAAATAATATATAGTGTAAAAATGGATGTTGACATCTGGCAGAATAGAAAATATTTGAGATAGATGAAATGGAGAAAAGA GCGAACTTTATAACTCTACGATCTGATCGCAGAGCTGCAGAAAAATATGCTGCTGTTTTCATACATTTTGAAAGCGGACAGCAGCGGTCATACTGGTATGATGTGATCCGGACGGTGGAAGGATTATATCACGCAATCATTTATGAGAAACTCGGATTGGGTTTCTCATAAATTTTGCAAAAAAATAATCAGTGCACCGGAAAAAAAGATTGCACAATGGGGCGATGTATGGTCAAATAATATATAGTGTAAAAATGGATGTTGACATCTGGCAGAATAGAAAATATTTGAGATAGATGAAATGGAGAAAAGAATGGCAGCAAAGAAAGTAGTAGTCG ATCGCAGAGCTGCAGAAAAATATGCTGCTGTTTTCATACATTTTGAAAGCGGACAGCAGCGGTCATACTGGTATGATGTGATCCGGACGGTGGAAGGATTATATCACGCAATCATTTATGAGAAACTCGGATTGGGTTTCTCATAAA 147 TTerm_1076 NZ_LR027880.1 3378297 3378303 7 3378312 3378318 7 8 100 0 14 14 85 14 85 0 3378307 CAGGGCG CGCCCTG True AGCAAAAAC CCAGATTTT True True - CAGGGCG TCGCATGG CGCCCTG GTTTTTGCT 68 RIL182_RS15895 intergenic 3378268 3378331 - down AGTAAAAATCTGGCAGGGCGTCGCATGGCGCCCTGTTTTTGCTTACTTATTGGAAAATATATT AAGTTGAAGAAGTGTCAGAAGAATAAGTAAAAATCTGGCAGGGCGTCGCATGGCGCCCTGTTTTTGCTTACTTATTGGAAAATATATTATGGGGGAAAATATGGGAGAGGAAG AGTAAAAATCTGGCAGGGCGTCGCATGGCGCCCT 34 TTerm_1077 NZ_LR027880.1 3394885 3394891 7 3394896 3394902 7 4 100 0 14 85 14 85 14 0 3394893 TTTTTCT AGAAAAA True ACAAAATCT CTGGCTGCC True False - TTTTTCT GTAA AGAAAAA AGATTTTGT 36 RIL182_RS15955 intergenic 3394856 3394961 - down AAAGAACTGGTTGTCAGAAGGTTGTGGGAAACATGAACCGCATCCAGATGGGCAGCCAGTTTTTCTGTAAAGAAAAAGATTTTGTCAGACAGGAAAGGGGAAACT TTGATATAGAGAGAACGACGGGCTAAAAGAACTGGTTGTCAGAAGGTTGTGGGAAACATGAACCGCATCCAGATGGGCAGCCAGTTTTTCTGTAAAGAAAAAGATTTTGTCAGACAGGAAAGGGGAAACTATGGCACCACTGAAAGTAGAACAAT AAAGAACTGGTTGTCAGAAGGTTGTGGGAAACATGAACCGCATCCAGATGGGCAGCCAGTTTTTCTGTAAAGAAAA 76 TTerm_1078 NZ_LR027880.1 3409954 3409963 10 3409969 3409978 10 5 90 0 15 95 5 100 0 0 3409965 AAAAAAATAT ATATTGTTTT True CTATGCGAA ATTTTTTCT True True - AAAACAATAT GGCAG ATATTTTTTT TTCGCATAG 38 RIL182_RS16010 intergenic 3409935 3409990 + down CGAAGGAACACTATGCGAAAAAAAATATCTGCCATATTGTTTTATTTTTTCTTTT CCCATTTTTATATTTCAGATTTTAACGAAGGAACACTATGCGAAAAAAAATATCTGCCATATTGTTTTATTTTTTCTTTTTGATAAGCTGCCTTCTGATTCCACT AAAAGAAAAAATAAAACAATATGGCAGATATTTTTT 36 TTerm_1079 NZ_LR027880.1 3416939 3416947 9 3416957 3416965 9 9 100 0 18 77 22 77 22 0 3416951 TTATGTCTT AAGACATAA True AAAATACAT CCTTTCTAC True False - TTATGTCTT AAATGCATA AAGACATAA ATGTATTTT 52 RIL182_RS16035 intergenic 3416875 3417013 - down GATGCAACATAATATTGTATTATGTTACTAAACTCATATGTAGAAAGGTTATGTCTTAAATGCATAAAGACATAATGTATTTTCTGTGAAAATACGTGCATATGAAGAACACACACACATGGAAAGTGAGGAAAAAAA GAAAGCTTAATAATCTTGGATTATAGATGCAACATAATATTGTATTATGTTACTAAACTCATATGTAGAAAGGTTATGTCTTAAATGCATAAAGACATAATGTATTTTCTGTGAAAATACGTGCATATGAAGAACACACACACATGGAAAGTGAGGAAAAAAAATGAGGGCAAAACAAGTAACAGCCT GATGCAACATAATATTGTATTATGTTACTAAACTCATATGTAGAAAGGTTATGTCTTAAATGCATAAAGACATA 74 TTerm_1080 NZ_LR027880.1 3417899 3417912 14 3417920 3417933 14 7 100 0 28 50 50 50 50 0 3417915 ACTGCCGTTTCATG CATGAAACGGCAGT True ACAAAAAAA CCGTCATTG True False - ACTGCCGTTTCATG AAGCCAA CATGAAACGGCAGT TTTTTTTGT 72 RIL182_RS16040 intergenic 3417825 3418048 - down ATAAAATTACGACAAAATCATTTTGTTAATTCCTTTCCCTAATTTAATATAACACCTGTGACAAGCAGGTAATGCGTGGTCTTTTTACCCATTTAGACTGTGCAGACAATGACGGACTGCCGTTTCATGAAGCCAACATGAAACGGCAGTTTTTTTGTTATTTTCCTCTGTATGATAATTTTATATTTTGTGGAAAAACTATTAGGAAAATGGAGGTAGTCAT ATGCTTCTGGACGTGTTCAGAGATAATAAAATTACGACAAAATCATTTTGTTAATTCCTTTCCCTAATTTAATATAACACCTGTGACAAGCAGGTAATGCGTGGTCTTTTTACCCATTTAGACTGTGCAGACAATGACGGACTGCCGTTTCATGAAGCCAACATGAAACGGCAGTTTTTTTGTTATTTTCCTCTGTATGATAATTTTATATTTTGTGGAAAAACTATTAGGAAAATGGAGGTAGTCATATGAAACAGTTTGAAGGGTATGAAG ATAAAATTACGACAAAATCATTTTGTTAATTCCTTTCCCTAATTTAATATAACACCTGTGACAAGCAGGTAATGCGTGGTCTTTTTACCCATTTAGACTGTGCAGACAATGACGGACTGCCGTTTCATGAAGCCAACATGAAACGGCAG 149 TTerm_1081 NZ_LR027880.1 3437743 3437759 17 3437767 3437783 17 7 88 0 24 70 29 73 26 0 3437762 AAAACCATATGATACAT ATGTATCACATGGCTTT True AAAAGTAAA ACTTATTAC True False - AAAGCCATGTGATACAT ATAGAAA ATGTATCATATGGTTTT TTTACTTTT 56 RIL182_RS16130 intergenic 3437454 3437822 - down AGTAAAGTAATAAGTAAAGTAATAAGTAAAGTAATAAGTAAAGCCATGTGATACATATAGAAAATGTATCATATGGTTTTTTACTTTTTTACGGTTATGTGGAAAACGACTGGTGAAATATGATATACTTATCGCGAATGATGTTGAGACCGAAAGAGCTGGAAAAGATCAGAAAGAAGATTTCAGTAGAAAATGACGAATTAGATTGTCTTACAGCGATGTGTTACATGGGGACTGGAAAATATAGTAAGGCAAATTCTATGCTGGAAAAAATTGGAAAAAGACGCAACGGGCAGTTACCCATTTGCGTCTTTTTCTATAGAAGAGCAATGAAACAACAGGAAACAGATACAATGGAGGAAGAGAAG CAATTGTTTCAGTTGAAAAGCAATAAGTAAAGTAATAAGTAAAGTAATAAGTAAAGTAATAAGTAAAGCCATGTGATACATATAGAAAATGTATCATATGGTTTTTTACTTTTTTACGGTTATGTGGAAAACGACTGGTGAAATATGATATACTTATCGCGAATGATGTTGAGACCGAAAGAGCTGGAAAAGATCAGAAAGAAGATTTCAGTAGAAAATGACGAATTAGATTGTCTTACAGCGATGTGTTACATGGGGACTGGAAAATATAGTAAGGCAAATTCTATGCTGGAAAAAATTGGAAAAAGACGCAACGGGCAGTTACCCATTTGCGTCTTTTTCTATAGAAGAGCAATGAAACAACAGGAAACAGATACAATGGAGGAAGAGAAGATGAAAAAAAGAGCAAAAAAGATAG AGTAAAGTAATAAGTAAAGTAATAAGTAAAGTAATAAGTAAAGCCATGTGATACATATAGAAAATGTATCATATGGTTT 79 TTerm_1082 NZ_LR027880.1 3438332 3438341 10 3438350 3438359 10 8 90 0 15 95 5 100 0 0 3438345 AAAAAAGTTT AAATTTTTTT True TAATAGTGA TCACGTTTC True True - AAAAAAATTT TTTTTATG AAACTTTTTT TCACTATTA 30 RIL182_RS21995 intergenic 3438259 3438360 - down AAAAAAAATTTTTTTTATGAAACTTTTTTCACTATTATTTTATCTAAATAAATGAAACTTACAAATGATAAGTAATAAGAACACGCAGGAGGATATTCAGA TGAACCTGCAGAACGAGGAAACGTGAAAAAAAATTTTTTTTATGAAACTTTTTTCACTATTATTTTATCTAAATAAATGAAACTTACAAATGATAAGTAATAAGAACACGCAGGAGGATATTCAGAATGAGAAAAAAAACAATTTATGTAT AAAAAAAATTTTTTTTATGAAACTTTTT 28 TTerm_1083 NZ_LR027880.1 3448146 3448160 15 3448165 3448179 15 4 93 0 25 63 36 64 35 0 3448162 AAAAAAACGGGCTGA TCAGTCCGTTTTTTT True CATATCAAA GATATACTC True True - AAAAAAACGGACTGA ATTA TCAGCCCGTTTTTTT TTTGATATG 74 RIL182_RS16180 intergenic 3448132 3448333 + down AAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTTGATATACTCATATTCCAAATTTAATGTGCAGGTAATCTCTGATTACCTCTACGCATTTTTCACGCCCCCATCAAAACCGACACCACCGGCATCGTCACCACAGCAAGAATTGCCGTAAGCGCAACTCCTCTTGCCGCCAGATCATAATTTCCAT AGCTGCTGATTTAACAGATTTCTAAAAAAACATATCAAAAAAAAACGGGCTGATAATTCAGTCCGTTTTTTTGATATACTCATATTCCAAATTTAATGTGCAGGTAATCTCTGATTACCTCTACGCATTTTTCACGCCCCCATCAAAACCGACACCACCGGCATCGTCACCACAGCAAGAATTGCCGTAAGCGCAACTCCTCTTGCCGCCAGATCATAATTTCCATCATATTGCTGTCATACTGCCGACAG ATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTT 187 TTerm_1084 NZ_LR027880.1 3448146 3448160 15 3448165 3448179 15 4 93 0 25 63 36 64 35 0 3448162 AAAAAAACGGGCTGA TCAGTCCGTTTTTTT True CATATCAAA GATATACTC True True - AAAAAAACGGACTGA ATTA TCAGCCCGTTTTTTT TTTGATATG 74 RIL182_RS21380 intergenic 3448132 3448333 - down ATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTTTTTGATATGTTTTT CTGTCGGCAGTATGACAGCAATATGATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTTTTTGATATGTTTTTTTAGAAATCTGTTAAATCAGCAGCT ATGGAAATTATGATCTGGCGGCAAGAGGAGTTGCGCTTACGGCAATTCTTGCTGTGGTGACGATGCCGGTGGTGTCGGTTTTGATGGGGGCGTGAAAAATGCGTAGAGGTAATCAGAGATTACCTGCACATTAAATTTGGAATATGAGTATATCAAAAAAACGGACTGAATTATCAGCCCGTTTTTT 187 TTerm_1085 NZ_LR027880.1 3466456 3466464 9 3466470 3466478 9 5 100 0 18 22 77 22 77 0 3466466 GGAGTGGGC GCCCACTCC True CCAAAAAAG CTATACAAT True False - GGAGTGGGC GAAAT GCCCACTCC CTTTTTTGG 76 RIL182_RS16260 intergenic 3466291 3466495 - down ATGGAATGATTGTATAGGGAGTGGGCGAAATGCCCACTCCTTTTTTGGTGAACGCCGTTTGTGCGTCCCTCCGCTATCGACTTTTGCTAGGATGTGTGCTATGATATTTCAGAGTCTGCTGTGTAATAATGTTTATCGCAGATGATGATTTCATATAATAAAAATAGGTCTGGGGCGTATCGCGTCCGGAATGGAGGATTTACG CTGTAACACTTGGCAAGAAAAATTAATGGAATGATTGTATAGGGAGTGGGCGAAATGCCCACTCCTTTTTTGGTGAACGCCGTTTGTGCGTCCCTCCGCTATCGACTTTTGCTAGGATGTGTGCTATGATATTTCAGAGTCTGCTGTGTAATAATGTTTATCGCAGATGATGATTTCATATAATAAAAATAGGTCTGGGGCGTATCGCGTCCGGAATGGAGGATTTACGTTGTCAAAGTTTGAGGATTTCAGAA ATGGAATGATTGTATAGGGAGTGGGCGAAATGCCCACTC 39 TTerm_1086 NZ_LR027880.1 3468128 3468137 10 3468145 3468154 10 7 90 0 15 95 5 100 0 0 3468140 AATTATGTTT AAATATAATT True AATCAAAAA GATAACCTG True False - AATTATATTT GAGAAGA AAACATAATT TTTTTGATT 30 RIL182_RS16265 intergenic 3468033 3468143 - down AGAAGAAAACATAATTTTTTGATTGTTTTGTCACAAATAGAACACAATTTCTCTGTACACTCATAATCAGAAAAGGAAAAGAAATTCCGAATACGAAAGGAGAAATCGTT TATATCAGGTTATCAATTATATTTGAGAAGAAAACATAATTTTTTGATTGTTTTGTCACAAATAGAACACAATTTCTCTGTACACTCATAATCAGAAAAGGAAAAGAAATTCCGAATACGAAAGGAGAAATCGTTATGGATGGTAACAATTATAACAACA AGAAGAAAACATAAT 15 TTerm_1087 NZ_LR027880.1 3473057 3473064 8 3473071 3473078 8 6 87 0 11 100 0 100 0 0 3473067 AAAATAAT ATAATTTT True CTACCATAA CCAGAAAGC True False - AAAATTAT TGTATT ATTATTTT TTATGGTAG 22 RIL182_RS16285 intergenic 3473022 3473170 - down ACGGGAAAAAACGTTTGAGCATCAAAGAATAATAAAGAAATAATTAAGAAATTGTGACAAGAGTTTTAAGAAAAAGAAGTTGTGCTTTCTGGAAAATTATTGTATTATTATTTTTATGGTAGCTTGAAAATGAAAAAAGGATGACATT TATTTCGCGTATTATCGCACAGATAACGGGAAAAAACGTTTGAGCATCAAAGAATAATAAAGAAATAATTAAGAAATTGTGACAAGAGTTTTAAGAAAAAGAAGTTGTGCTTTCTGGAAAATTATTGTATTATTATTTTTATGGTAGCTTGAAAATGAAAAAAGGATGACATTATGATAAAAGATAATCAACAGCATT ACGGGAAAAAACGTTTGAGCATCAAAGAATAATAAAGAAATAATTAAGAAATTGTGACAAGAGTTTTAAGAAAAAGAAGTTGTGCTTTCTGGAAAATTATTGTATTATTATTT 113 TTerm_1088 NZ_LR027880.1 3481219 3481232 14 3481240 3481252 13 7 92 7 16 70 29 69 30 0 3481235 AAAAAGATAAGAGG CCTCTTTCTTTTT True GTTGAGTCA AGATTATGA True True - AAAAAGAAAGAGG CATAGAA CCTCTTATCTTTTT TGACTCAAC 56 RIL182_RS16310 intergenic 3481131 3481271 + down CTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTTAGATTATGAGTAATTTACC TCCTAATTCTGTTACTTTGAAATAACTGATGAAATCTCCCGGATTTCGCCCGGTTATATTTTTCTACATAAGTTGTTGTTGAACTTCGATTTCAGTTGTAGTGTGTTGAGTCAAAAAGATAAGAGGTTCTATGCCTCTTTCTTTTTAGATTATGAGTAATTTACCTACTCAAAATAGTAGTATCCACCCG GGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTT 52 TTerm_1089 NZ_LR027880.1 3481219 3481232 14 3481240 3481252 13 7 92 7 16 70 29 69 30 0 3481235 AAAAAGATAAGAGG CCTCTTTCTTTTT True GTTGAGTCA AGATTATGA True True - AAAAAGAAAGAGG CATAGAA CCTCTTATCTTTTT TGACTCAAC 56 RIL182_RS16315 intergenic 3481131 3481271 - down GGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTTTGACTCAACACACTACAACTGAAATCGAAGTTCAACAACAACTTATGTAGAAAAATATAACCGGGCGAAATCCGGGAGATTTCATCAG CGGGTGGATACTACTATTTTGAGTAGGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTTTGACTCAACACACTACAACTGAAATCGAAGTTCAACAACAACTTATGTAGAAAAATATAACCGGGCGAAATCCGGGAGATTTCATCAGTTATTTCAAAGTAACAGAATTAGGA GGTAAATTACTCATAATCTAAAAAGAAAGAGGCATAGAACCTCTTATCTTTT 52 TTerm_1090 NZ_LR027880.1 3504263 3504278 16 3504286 3504301 16 7 87 0 22 56 43 57 42 0 3504281 AAAAGCACGGGTTTCC GGAAAAACGTGCTTTT True AAGTAACGA TTGCATAGC True True - AAAAGCACGTTTTTCC ACTAACC GGAAACCCGTGCTTTT TCGTTACTT 60 RIL182_RS16400 intergenic 3504243 3504456 + down TTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTTTTGCATAGCTGCGGTTGATGACTGAGGGACGAAAAAAGGTGTGTCCGAGTGCTTTGGCGGCGCCGGATTCGCGGAACCCCGGGCTGTTTTGTGCAATTTGCCTTTCACTAACCCCGATACACCTTTTGTTCCAAACATCCAATCCCTATTTTCCC ACTACTCACGTATTTTATTGGTTGATTTTTTATTAAAAGTAACGAAAAGCACGGGTTTCCGGTTAGTGGAAAAACGTGCTTTTTTGCATAGCTGCGGTTGATGACTGAGGGACGAAAAAAGGTGTGTCCGAGTGCTTTGGCGGCGCCGGATTCGCGGAACCCCGGGCTGTTTTGTGCAATTTGCCTTTCACTAACCCCGATACACCTTTTGTTCCAAACATCCAATCCCTATTTTCCCTACAACAATTTCCGGAATACCGGTA GGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTT 193 TTerm_1091 NZ_LR027880.1 3504263 3504278 16 3504286 3504301 16 7 87 0 22 56 43 57 42 0 3504281 AAAAGCACGGGTTTCC GGAAAAACGTGCTTTT True AAGTAACGA TTGCATAGC True True - AAAAGCACGTTTTTCC ACTAACC GGAAACCCGTGCTTTT TCGTTACTT 60 RIL182_RS16405 intergenic 3504243 3504456 - down GGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTTTCGTTACTTTTAATAAAAAA TACCGGTATTCCGGAAATTGTTGTAGGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTTTCGTTACTTTTAATAAAAAATCAACCAATAAAATACGTGAGTAGT GGGAAAATAGGGATTGGATGTTTGGAACAAAAGGTGTATCGGGGTTAGTGAAAGGCAAATTGCACAAAACAGCCCGGGGTTCCGCGAATCCGGCGCCGCCAAAGCACTCGGACACACCTTTTTTCGTCCCTCAGTCATCAACCGCAGCTATGCAAAAAAGCACGTTTTTCCACTAACCGGAAACCCGTGCTTT 193 TTerm_1092 NZ_LR027880.1 3509779 3509792 14 3509797 3509810 14 4 85 0 18 82 17 83 16 0 3509794 AAAAAGCTGTAATT AATTACTTCTTTTT True CTTAAGGTA CCACTTTGC True True - AAAAAGAAGTAATT TATG AATTACAGCTTTTT TACCTTAAG 44 RIL182_RS16430 intergenic 3509663 3509799 - down ATTTATGAATTACAGCTTTTTACCTTAAGGTTTTCTTAAAACGTGAAAATAAGATAGTAAAAAAGTCTTAAAAAGTGGTATAATAACAGAAACGGTGCAAAAGAGCACAAAATAATTACGTTGAGAGGTATTTAGT TGTATGCAAAGTGGAAAAAGAAGTAATTTATGAATTACAGCTTTTTACCTTAAGGTTTTCTTAAAACGTGAAAATAAGATAGTAAAAAAGTCTTAAAAAGTGGTATAATAACAGAAACGGTGCAAAAGAGCACAAAATAATTACGTTGAGAGGTATTTAGTTTGAAGAAAAGAGCGATTTTAATGC ATTTATGAATTACAGCTTTT 20 TTerm_1093 NZ_LR027880.1 3514847 3514859 13 3514868 3514880 13 8 92 0 21 46 53 50 50 0 3514863 ACTTGCCGGAAGT ACTTCCCGCAAGT True AAAAAACAA AAAAAACAA True False - ACTTGCGGGAAGT TGTTTTTT ACTTCCGGCAAGT TTGTTTTTT 66 RIL182_RS16450 intergenic 3514839 3514966 + down AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTAC GGAAGAGCAGATGTCAGGCAAGTAAAAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTACTATTTTTCATTCGCACGGTACACAA GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAG 119 TTerm_1094 NZ_LR027880.1 3514847 3514859 13 3514868 3514880 13 8 92 0 21 46 53 50 50 0 3514863 ACTTGCCGGAAGT ACTTCCCGCAAGT True AAAAAACAA AAAAAACAA True False - ACTTGCGGGAAGT TGTTTTTT ACTTCCGGCAAGT TTGTTTTTT 66 RIL182_RS16455 intergenic 3514839 3514966 - down GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTT TTGTGTACCGTGCGAATGAAAAATAGTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTTTTACTTGCCTGACATCTGCTCTTCC GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAG 119 TTerm_1095 NZ_LR027880.1 3514869 3514880 12 3514889 3514900 12 8 83 0 14 41 58 50 50 0 3514884 CTTCCCGCAAGT ACTTGCCGCAAG True AAAAACAAC ACCAAAAAC True False - CTTGCGGCAAGT TGTTTTTT ACTTGCGGGAAG GTTGTTTTT 52 RIL182_RS16450 intergenic 3514839 3514966 + down AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTAC GGAAGAGCAGATGTCAGGCAAGTAAAAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTACTATTTTTCATTCGCACGGTACACAA GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAA 97 TTerm_1096 NZ_LR027880.1 3514869 3514880 12 3514889 3514900 12 8 83 0 14 41 58 50 50 0 3514884 CTTCCCGCAAGT ACTTGCCGCAAG True AAAAACAAC ACCAAAAAC True False - CTTGCGGCAAGT TGTTTTTT ACTTGCGGGAAG GTTGTTTTT 52 RIL182_RS16455 intergenic 3514839 3514966 - down GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTT TTGTGTACCGTGCGAATGAAAAATAGTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTTTTACTTGCCTGACATCTGCTCTTCC GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAA 97 TTerm_1097 NZ_LR027880.1 3514904 3514920 17 3514929 3514945 17 8 94 0 29 55 44 56 43 0 3514924 AAAAACGGCTCCACATC GATGTGAAGCCGTTTTT True GCAAGACCA CTTATACAA True True - AAAAACGGCTTCACATC ACACCATG GATGTGGAGCCGTTTTT TGGTCTTGC 82 RIL182_RS16450 intergenic 3514839 3514966 + down AAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTAC GGAAGAGCAGATGTCAGGCAAGTAAAAAAACAACTTGCCGGAAGTAAAAAACAACTTCCCGCAAGTAAAAAACAACTTGCCGCAAGACCAAAAACGGCTCCACATCCATGGTGTGATGTGAAGCCGTTTTTCTTATACAACATACACTTTACTATTTTTCATTCGCACGGTACACAA GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTT 62 TTerm_1098 NZ_LR027880.1 3514904 3514920 17 3514929 3514945 17 8 94 0 29 55 44 56 43 0 3514924 AAAAACGGCTCCACATC GATGTGAAGCCGTTTTT True GCAAGACCA CTTATACAA True True - AAAAACGGCTTCACATC ACACCATG GATGTGGAGCCGTTTTT TGGTCTTGC 82 RIL182_RS16455 intergenic 3514839 3514966 - down GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTT TTGTGTACCGTGCGAATGAAAAATAGTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTTTGGTCTTGCGGCAAGTTGTTTTTTACTTGCGGGAAGTTGTTTTTTACTTCCGGCAAGTTGTTTTTTTACTTGCCTGACATCTGCTCTTCC GTAAAGTGTATGTTGTATAAGAAAAACGGCTTCACATCACACCATGGATGTGGAGCCGTTTT 62 TTerm_1099 NZ_LR027880.1 3516177 3516190 14 3516197 3516210 14 6 100 0 28 50 50 50 50 0 3516193 AAAATGGGTGTGGC GCCACACCCATTTT True CGTAACCTA GATTTTTAA True True - AAAATGGGTGTGGC TGTTTT GCCACACCCATTTT TAGGTTACG 88 RIL182_RS16460 intergenic 3516173 3516216 + down CCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTTGATTTT CAGTCAGTTAAGTAAACTTCCGTAACCTAAAATGGGTGTGGCAAAACAGCCACACCCATTTTGATTTTTAAATTTTCCCGCTGTCTTTCAGCA AAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTT 39 TTerm_1100 NZ_LR027880.1 3516177 3516190 14 3516197 3516210 14 6 100 0 28 50 50 50 50 0 3516193 AAAATGGGTGTGGC GCCACACCCATTTT True CGTAACCTA GATTTTTAA True True - AAAATGGGTGTGGC TGTTTT GCCACACCCATTTT TAGGTTACG 88 RIL182_RS16465 intergenic 3516173 3516216 - down AAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTTTAGG TGCTGAAAGACAGCGGGAAAATTTAAAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTTTAGGTTACGGAAGTTTACTTAACTGACTG AAAATCAAAATGGGTGTGGCTGTTTTGCCACACCCATTT 39 TTerm_1101 NZ_LR027880.1 3522336 3522347 12 3522355 3522366 12 7 91 0 19 54 45 54 45 0 3522350 AAAAAGCAGAGC GCCCTGCTTTTT True TCCCACAAA CATTCCCGC True True - AAAAAGCAGGGC ATGGGTG GCTCTGCTTTTT TTTGTGGGA 78 RIL182_RS16495 intergenic 3522060 3522379 - down AGGTGCGGGAATGAAAAAGCAGGGCATGGGTGGCTCTGCTTTTTTTGTGGGAGTGGGGTGGCTGGGTTTGCCGGCTGGTGCGGTGTGCCGACCGCCTGCGTACCTGCATGAAAAAGAATACTATACAGCTTTCCTTTGGGTTGCTATAATAAAAAGAAAGGTTTGCCAACGCGAAACTCTCAAGAACGTAGCGTCGTTGTGCGGCGTGCCTTCGTTAAACAGGTGCCCGCCACACAACGACCACCACAACCTAAAAAAGAGTTTCGCCCTAGGCTCTATTACTTTATTATAACAACCCAAAAGAAAGGGGCACACACAA ACTTTATTGAGGTGTACCAGAGTTAAGGTGCGGGAATGAAAAAGCAGGGCATGGGTGGCTCTGCTTTTTTTGTGGGAGTGGGGTGGCTGGGTTTGCCGGCTGGTGCGGTGTGCCGACCGCCTGCGTACCTGCATGAAAAAGAATACTATACAGCTTTCCTTTGGGTTGCTATAATAAAAAGAAAGGTTTGCCAACGCGAAACTCTCAAGAACGTAGCGTCGTTGTGCGGCGTGCCTTCGTTAAACAGGTGCCCGCCACACAACGACCACCACAACCTAAAAAAGAGTTTCGCCCTAGGCTCTATTACTTTATTATAACAACCCAAAAGAAAGGGGCACACACAAATGAGCGAGTTAACCAAAGAAATGC AGGTGCGGGAATGAAAAAGCAGGGCATGGGTGGCTCTGCTTTT 43 TTerm_1102 NZ_LR027880.1 3537547 3537554 8 3537561 3537568 8 6 87 0 11 68 31 71 28 0 3537557 GATTAAAG CTTTAGTC True TAAAATCTG CTAACTTAC True False - GACTAAAG TAACAC CTTTAATC CAGATTTTA 38 RIL182_RS16560 intergenic 3537511 3537682 + down AGGATTGACAGTACCCCGCTATAAACTTAAAATCTGATTAAAGGTGTTACTTTAGTCCTAACTTACACAGAATGAAAATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTATGATGCCCTGAAAAACGGGCAGGAATGGAGAGATTTTA TCATTTTCAGTCTTTATTGCTTTAAAGGATTGACAGTACCCCGCTATAAACTTAAAATCTGATTAAAGGTGTTACTTTAGTCCTAACTTACACAGAATGAAAATAGTGTGAAAAATAAGATTTTTCACACGCAAGATTTGTGCTTACGCACAAACTTATGATGCCCTGAAAAACGGGCAGGAATGGAGAGATTTTATGGAGTATAACGAATCGTATTTCAA TAAAATCTCTCCATTCCTGCCCGTTTTTCAGGGCATCATAAGTTTGTGCGTAAGCACAAATCTTGCGTGTGAAAAATCTTATTTTTCACACTATTTTCATTCTGTGTAAGTTAGGACTAAAGTAACACCTTTAAT 135 TTerm_1103 NZ_LR027880.1 3544972 3544982 11 3544989 3544999 11 6 81 0 12 72 27 77 22 0 3544985 AAAAATCTGGT ACAAGCTTTTT True ATATTAGCA ATCACAGAT True True - AAAAAGCTTGT GGTATG ACCAGATTTTT TGCTAATAT 48 RIL182_RS16595 intergenic 3544931 3545395 - down AGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGT TGGGAGAGCTGCTTTTAGACAGATAAGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGTATGCATATGGCAGATGCGTTGGTTG AGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTT 423 TTerm_1104 NZ_LR027880.1 3545142 3545147 6 3545157 3545162 6 9 100 0 12 50 50 50 50 0 3545151 GATTGC GCAATC True ACACAAAAG AAAATAAAA True False - GATTGC GATGATCCT GCAATC CTTTTGTGT 48 RIL182_RS16595 intergenic 3544931 3545395 - down AGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGT TGGGAGAGCTGCTTTTAGACAGATAAGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAATCTTTTGTGTGTATCGGCCGATCACATAAAAGATTGTAACAATTATGTAACATTTTCGCAATAGGAGCATTATGGCAGGAATGGAAGGGATTAGGATGTGAGTTAGTTGGAAAAAAATAAAAGTATCAACCAAATATCTGTGATAAAAAGCTTGTGGTATGACCAGATTTTTGCTAATATGGTCAAAGATAAATGAAAGGTGGTATTTTGGTATGCATATGGCAGATGCGTTGGTTG AGTATATTTAGAAAAAAGTAGATTTTTGCTGTATAGGAATTGATATTTAGACAGATAAAAGAAAAATACCCCGGGCAGATGCCCGGGGCATATATTTCTGGCAGTCAGTCTGCCGGAAAAGTGCACAAGCTATTATTAACAACCGAGGTTAAAATATTTGCAGATAGCATTAAATAACTCGGAACAGCTATTGAAATTAAAACACATAGTTTCGTCCTCCTTATTTTTATTTTGATTGCGATGATCCTGCAAT 253 TTerm_1105 NZ_LR027880.1 3546064 3546075 12 3546080 3546091 12 4 91 0 19 45 54 45 54 0 3546077 CGGAAGTGCTGA TCAACACTTCCG True AAAAAGAAC CATTTTCAA True True - CGGAAGTGTTGA TTTT TCAGCACTTCCG GTTCTTTTT 54 RIL182_RS16600 intergenic 3545922 3546105 - down ACGATTTGAAAATGCGGAAGTGTTGATTTTTCAGCACTTCCGTTCTTTTTTATGCTTTTTCGATTGGGTTGGGTGTGGGTTGGAGAGTATCTGTTTTTTTCATGTCCACATTGTGTCCGCAGGATCATGTATCTTATGGATGGCAAGTTAGTGTAATGATAATGTATGCCAAGGGAGGCAAAA CCGGGGTTCGAATCCCCGATGTCTCACGATTTGAAAATGCGGAAGTGTTGATTTTTCAGCACTTCCGTTCTTTTTTATGCTTTTTCGATTGGGTTGGGTGTGGGTTGGAGAGTATCTGTTTTTTTCATGTCCACATTGTGTCCGCAGGATCATGTATCTTATGGATGGCAAGTTAGTGTAATGATAATGTATGCCAAGGGAGGCAAAAATGAACCAGTTTTCATCAGATAAAC ACGATTTGAAAATGCGGAAGTGTTGATTTTTCAGCACTTCC 41 TTerm_1106 NZ_LR027880.1 3571211 3571218 8 3571227 3571234 8 8 100 0 16 87 12 87 12 0 3571222 AAAAAGAA TTCTTTTT True TTTTGAAAA CTGCGTCTT True False - AAAAAGAA TGCGTCTT TTCTTTTT TTTTCAAAA 40 RIL182_RS16800 intergenic 3571160 3571415 - down AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACG CGATCTTAAAGGGAAGACAGTCATAAGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACGATGAGATTGGAATTTGATATAACAT AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTT 204 TTerm_1107 NZ_LR027880.1 3571217 3571222 6 3571228 3571233 6 5 100 0 12 83 16 83 16 0 3571224 AAAAGA TCTTTT True AAAAAAAGA TCTGCGTCT True False - AAAAGA ATGCG TCTTTT TCTTTTTTT 32 RIL182_RS16800 intergenic 3571160 3571415 - down AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACG CGATCTTAAAGGGAAGACAGTCATAAGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACGATGAGATTGGAATTTGATATAACAT AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTT 198 TTerm_1108 NZ_LR027880.1 3571215 3571226 12 3571236 3571247 12 9 100 0 24 58 41 58 41 0 3571230 AGAAAAGACGCA TGCGTCTTTTCT True GAAAAAAAA CTCTGAAAA True True - AGAAAAGACGCA GAAAAAGAA TGCGTCTTTTCT TTTTTTTTC 80 RIL182_RS16800 intergenic 3571160 3571415 - down AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACG CGATCTTAAAGGGAAGACAGTCATAAGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTCTTTTTTTTCAAAAAATGTTATACTAAGCTGATTCTAAAATGGTGGGGGATTGACGATGAGATTGGAATTTGATATAACAT AGCAGGAGCTAACAGAGGTTTCGTTACTGTTTACAGTCAGGCATTTTCTGAACTGAAAATGCCGTATGATACAGTGGTGGTAGCAGATTTTGCCGATTTGGAATGCGAAGCATCGGCAAAATCCGTTACTGGAACGAGGTACGAGTGGACAGTAACGAGTTTTCAGAGAGAAAAGACGCAGAAAAAGAATGCGTCTTTTC 200 TTerm_1109 NZ_LR027880.1 3572100 3572118 19 3572124 3572142 19 5 73 0 13 63 36 64 35 0 3572120 TCATACAATAAAATGCACA TGAGCATTCTGCTGTCTGA True GAAATATCT ATACGACAA True False - TCAGACAGCAGAATGCTCA CAAAA TGTGCATTTTATTGTATGA AGATATTTC 50 RIL182_RS16805 intergenic 3572029 3572440 - down ACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGTTTTGTCGTATTCAGACAGCAGAATGCTCACAAAATGTGCATTTTATTGTATGAGATATTTCGCAGACAAAAACACGCTTACAATCCCTCGCATTTTCCGAAAAGAGAAAAGGAGACGAGTGAA CACTCACGATGAAAATTAATGGTTGACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGTTTTGTCGTATTCAGACAGCAGAATGCTCACAAAATGTGCATTTTATTGTATGAGATATTTCGCAGACAAAAACACGCTTACAATCCCTCGCATTTTCCGAAAAGAGAAAAGGAGACGAGTGAAATGGATGCAACAAATAAAACAGTAA ACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGTTTTGTCGTATTCAGACAGCAGAATGCTCACAAAATGTGCATTTTATTGTATG 340 TTerm_1110 NZ_LR027880.1 3572152 3572162 11 3572170 3572180 11 7 100 0 22 36 63 36 63 0 3572165 AACCCCGGATG CATCCGGGGTT True TACGACAAA CTATCATGT True False - AACCCCGGATG ATGGTTA CATCCGGGGTT TTTGTCGTA 76 RIL182_RS16805 intergenic 3572029 3572440 - down ACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGTTTTGTCGTATTCAGACAGCAGAATGCTCACAAAATGTGCATTTTATTGTATGAGATATTTCGCAGACAAAAACACGCTTACAATCCCTCGCATTTTCCGAAAAGAGAAAAGGAGACGAGTGAA CACTCACGATGAAAATTAATGGTTGACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGTTTTGTCGTATTCAGACAGCAGAATGCTCACAAAATGTGCATTTTATTGTATGAGATATTTCGCAGACAAAAACACGCTTACAATCCCTCGCATTTTCCGAAAAGAGAAAAGGAGACGAGTGAAATGGATGCAACAAATAAAACAGTAA ACAGATCAGAAAAACATGCATACAATAGAGAGCGTAAAAATAATATTAATTCTTCGGGGCAGGGTGATGCAGTAAGATTTGCAGATTCCCGACCGACGGTGATGTAGAGTCCTGATAATGATCAGAGTCATTTACAAAGTCCGTGACCTGCTAAGGCAGCTGATCCGGTGAGATTCCGGAACCGACAGTATAGTCTGGATGAGAGAAGATAAGCATGTGAATGATAAGACGTCAGAAAAGACGTTTCTGTTACATGATAGAACCCCGGATGATGGTTACATCCGGGGT 288 TTerm_1111 NZ_LR027880.1 3579437 3579458 22 3579463 3579484 22 4 90 0 34 59 40 60 40 0 3579460 AAAACGAACCACCCGGTGTAAA TTTACACCAAGTGGTTCGTTTT True CATTATAAA CCTATGGTA True True - AAAACGAACCACTTGGTGTAAA AGCA TTTACACCGGGTGGTTCGTTTT TTTATAATG 76 RIL182_RS16840 intergenic 3579398 3579507 - down AAAAATTTACCACTTACCATAGGAAAACGAACCACTTGGTGTAAAAGCATTTACACCGGGTGGTTCGTTTTTTATAATGTACCTGTCAGTACAGAAAAGGAGACAGGTT TTTCCGCAATGAGCCGCATTATGTAAAAAATTTACCACTTACCATAGGAAAACGAACCACTTGGTGTAAAAGCATTTACACCGGGTGGTTCGTTTTTTATAATGTACCTGTCAGTACAGAAAAGGAGACAGGTTATGAAAATTAAAATCGAAATGGATG AAAAATTTACCACTTACCATAGGAAAACGAACCACTTGGTGTAAAAGCATTTACACCGGGTGGTTCGTTT 70 TTerm_1112 NZ_LR027880.1 3585464 3585478 15 3585487 3585501 15 8 93 0 25 50 50 50 50 0 3585482 AAAAGGCGGTCACAG CTGTGACCACCTTTT True TCGTGGACA TCTATTTAC True True - AAAAGGTGGTCACAG ACTAACGG CTGTGACCGCCTTTT TGTCCACGA 74 RIL182_RS22355 intergenic 3585437 3585520 + down TTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTTTCTATTTACTGCAGATGTC TCAATATAAGCTGATTACGATTTAGTTAGGAATTTTTGTAGATTCGTGGACAAAAGGCGGTCACAGCCGTTAGTCTGTGACCACCTTTTTCTATTTACTGCAGATGTCTATGCTTCTGCTTCTTTCGCATTAT GACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTT 56 TTerm_1113 NZ_LR027880.1 3585464 3585478 15 3585487 3585501 15 8 93 0 25 50 50 50 50 0 3585482 AAAAGGCGGTCACAG CTGTGACCACCTTTT True TCGTGGACA TCTATTTAC True True - AAAAGGTGGTCACAG ACTAACGG CTGTGACCGCCTTTT TGTCCACGA 74 RIL182_RS16870 intergenic 3585437 3585520 - down GACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTTTGTCCACGAATCTACAAAAATTCCTAA ATAATGCGAAAGAAGCAGAAGCATAGACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTTTGTCCACGAATCTACAAAAATTCCTAACTAAATCGTAATCAGCTTATATTGA GACATCTGCAGTAAATAGAAAAAGGTGGTCACAGACTAACGGCTGTGACCGCCTTT 56 TTerm_1114 NZ_LR027880.1 3586446 3586455 10 3586462 3586471 10 6 90 0 15 95 5 100 0 0 3586458 AAATATTTTA TAAAGTATTT True CGCAAGCAA ATGTTTTAA True True - AAATACTTTA AAGTAC TAAAATATTT TTGCTTGCG 38 RIL182_RS16875 intergenic 3586320 3586510 - down GAAAACATGTCGGAAATGATATTATACACTTTAAAACATAAATACTTTAAAGTACTAAAATATTTTGCTTGCGGAATGTGTCACATCTTGTTATAATGCTTTTTATAAAACAGGGAGGAAAACCAGGAGGAAAATCCTCTGCTCCTGCAGTGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTATA GCGATATGAAAGGTGTGATCGAGTAGAAAACATGTCGGAAATGATATTATACACTTTAAAACATAAATACTTTAAAGTACTAAAATATTTTGCTTGCGGAATGTGTCACATCTTGTTATAATGCTTTTTATAAAACAGGGAGGAAAACCAGGAGGAAAATCCTCTGCTCCTGCAGTGGCAGTCGCATTTTGCTCCGCAAAACAAGGAGGATTATAATGGATAAGATAGAAGCGATCCGTG GAAAACATGTCGGAAATGATATTATACACTTTAAAACATAAATACTTTAAAGTACTAAAATATT 64 TTerm_1115 NZ_LR027880.1 3589567 3589586 20 3589591 3589610 20 4 90 0 30 62 37 61 38 0 3589588 AAAAACCGGGTGTCAAAAGA TCATTTGACATCCGGTTTTT True GTGAATTAA GTTACTTAT True True - AAAAACCGGATGTCAAATGA AGTG TCTTTTGACACCCGGTTTTT TTAATTCAC 68 RIL182_RS16895 intergenic 3589453 3589664 - down ATAAGCGTATTTTTGAAAAGGATGTCCCGTATCGAGACAATTCTCATAAGTAACAAAAACCGGATGTCAAATGAAGTGTCTTTTGACACCCGGTTTTTTAATTCACAGGAAATCAAATTTGAAAAAAACCAGAGAAATCTGATAGGATATAATAATAAATGAGCGAATCTGTATGTCAAAAAAGTTATACGAGGGAAGGAGAAAAGGCTGC TAAATCTGATCCATGAGAGTATGTAATAAGCGTATTTTTGAAAAGGATGTCCCGTATCGAGACAATTCTCATAAGTAACAAAAACCGGATGTCAAATGAAGTGTCTTTTGACACCCGGTTTTTTAATTCACAGGAAATCAAATTTGAAAAAAACCAGAGAAATCTGATAGGATATAATAATAAATGAGCGAATCTGTATGTCAAAAAAGTTATACGAGGGAAGGAGAAAAGGCTGCATGAAAAAGTTTATTCATGTCATAG ATAAGCGTATTTTTGAAAAGGATGTCCCGTATCGAGACAATTCTCATAAGTAACAAAAACCGGATGTCAAATGAAGTGTCTTTTGACACCCGGTTTT 97 TTerm_1116 NZ_LR027880.1 3602197 3602216 20 3602222 3602241 20 5 95 0 35 57 42 57 42 0 3602218 CAAAACAGGCGGAATGACAA TTATCATTCCGCCTGTTTTG True CCAATATAC ATAAATAAT True True - CAAAACAGGCGGAATGATAA AAATA TTGTCATTCCGCCTGTTTTG GTATATTGG 78 RIL182_RS16940 intergenic 3602115 3602329 - down ATTTATGTTTCGGATGACAGTCAGCAACGTCGTCCGGTTAATTTAGGTACGCTGTACCGGATTTGTAAATGCAGAGCCGATTATTTATCAAAACAGGCGGAATGATAAAAATATTGTCATTCCGCCTGTTTTGTATATTGGATTTTTATCCGGGAAGTAATAAGATGACCACAGAACGAAGATAATAAAAGCAGTTAGAAAGGAGATTCTTATT TTGGAAATTTTTTAGATGAAGGGTGATTTATGTTTCGGATGACAGTCAGCAACGTCGTCCGGTTAATTTAGGTACGCTGTACCGGATTTGTAAATGCAGAGCCGATTATTTATCAAAACAGGCGGAATGATAAAAATATTGTCATTCCGCCTGTTTTGTATATTGGATTTTTATCCGGGAAGTAATAAGATGACCACAGAACGAAGATAATAAAAGCAGTTAGAAAGGAGATTCTTATTATGTCAAATAAAAATAAAACCATCG ATTTATGTTTCGGATGACAGTCAGCAACGTCGTCCGGTTAATTTAGGTACGCTGTACCGGATTTGTAAATGCAGAGCCGATTATTTATCAAAACAGGCGGAATGATAAAAATATTGTCATTCCGCCTGTTTT 132 TTerm_1117 NZ_LR027880.1 3603052 3603064 13 3603070 3603082 13 5 100 0 26 69 30 69 30 0 3603066 AAATCCACCATTT AAATGGTGGATTT True TGCACAAAA AAAAAGGGG True False - AAATCCACCATTT CCCCA AAATGGTGGATTT TTTTGTGCA 68 RIL182_RS16945 intergenic 3602889 3603230 - down GAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGATAAAACTTTTTTTCATAAATTCTCCCCCTTTTTAAATCCACCATTTCCCCAAAATGGTGGATTTTTTGTGCAATAATTACAAATATCATTAAAATAGAGGCTTTTTAATGACAGAATAGCAGCGGTATGCTAAAATTCAGACAAGTATTTTCAGATGTATGAAACGAGGGAAAATAGTTAAACAACTTGTGATTTATTATAAATACGAAGGAAAAGGAGTGTCCGT GGAATGTGATCCGTCTTGGAAAATAGAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGATAAAACTTTTTTTCATAAATTCTCCCCCTTTTTAAATCCACCATTTCCCCAAAATGGTGGATTTTTTGTGCAATAATTACAAATATCATTAAAATAGAGGCTTTTTAATGACAGAATAGCAGCGGTATGCTAAAATTCAGACAAGTATTTTCAGATGTATGAAACGAGGGAAAATAGTTAAACAACTTGTGATTTATTATAAATACGAAGGAAAAGGAGTGTCCGTATGAGTAATACAACCAAAAGAGCAT GAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGATAAAACTTTTTTTCATAAATTCTCCCCCTTTTTAAATCCACCATTTCCCCAAAATGGTGGATT 178 TTerm_1118 NZ_LR027880.1 3603114 3603119 6 3603126 3603131 6 6 100 0 12 66 33 66 33 0 3603122 TATCAC GTGATA True AAAAGTTTT TTAATAATA True False - TATCAC GAACGA GTGATA AAAACTTTT 40 RIL182_RS16945 intergenic 3602889 3603230 - down GAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGATAAAACTTTTTTTCATAAATTCTCCCCCTTTTTAAATCCACCATTTCCCCAAAATGGTGGATTTTTTGTGCAATAATTACAAATATCATTAAAATAGAGGCTTTTTAATGACAGAATAGCAGCGGTATGCTAAAATTCAGACAAGTATTTTCAGATGTATGAAACGAGGGAAAATAGTTAAACAACTTGTGATTTATTATAAATACGAAGGAAAAGGAGTGTCCGT GGAATGTGATCCGTCTTGGAAAATAGAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGATAAAACTTTTTTTCATAAATTCTCCCCCTTTTTAAATCCACCATTTCCCCAAAATGGTGGATTTTTTGTGCAATAATTACAAATATCATTAAAATAGAGGCTTTTTAATGACAGAATAGCAGCGGTATGCTAAAATTCAGACAAGTATTTTCAGATGTATGAAACGAGGGAAAATAGTTAAACAACTTGTGATTTATTATAAATACGAAGGAAAAGGAGTGTCCGTATGAGTAATACAACCAAAAGAGCAT GAATGTGAGAGCAGTTGTGTGAACAAATTGTTACAGATTCTTCAAATAGAATTCAAAAAATGTACAACGGGATTTCACAAATTGCGGATATATTATTAATATCACGAACGAGTGAT 116 TTerm_1119 NZ_LR027880.1 3610412 3610420 9 3610428 3610436 9 7 88 0 13 72 27 75 25 0 3610423 TGAACATAA TTCTGTTCA True AAAAATAAT CAAATAAAC True False - TGAACAGAA GAAGTAT TTATGTTCA ATTATTTTT 42 RIL182_RS16970 intergenic 3610050 3610555 - down AAAATAAACCGTGATGAACCGCCTCTGATGTCAGGCTTTTGAACTGACTCAGAAGGCGGATTTTTAATTTATAGGAAATTATGTCCTATGAATTAAAAATCCCTCCATGAGTTTATTTGTGAACAGAAGAAGTATTTATGTTCATTATTTTTGGAGAATATGTACTATTTGTGCAACATTCACATGGTTAAACGATTTAAAAAATAATAAAGTTGTGCGAAAAAGCAAAAACTTAGAAAGAAACAGAAAACATGAGAAAATAACATAAAAACAAAAGAATATATATAGATAAATGAAAAATAACAGGCTTTAATTATAGCAATTAGTATGGTATATATAAACAAGAACGAAACAGAAATCAATCAAAATGACAAAGAAAAGAAAAAACATTTCAGAAAAAAGCAAAAAAGTGTGAATGAAATGTAAATAAACGGAAAATGAACATTTTAGTTCAATTAAACGTTTAACATAACACATGACAGGAGCATAAAGGAGGGAGGAAGTT TCCGCCAGTCGATCAAAACATTATAAAAATAAACCGTGATGAACCGCCTCTGATGTCAGGCTTTTGAACTGACTCAGAAGGCGGATTTTTAATTTATAGGAAATTATGTCCTATGAATTAAAAATCCCTCCATGAGTTTATTTGTGAACAGAAGAAGTATTTATGTTCATTATTTTTGGAGAATATGTACTATTTGTGCAACATTCACATGGTTAAACGATTTAAAAAATAATAAAGTTGTGCGAAAAAGCAAAAACTTAGAAAGAAACAGAAAACATGAGAAAATAACATAAAAACAAAAGAATATATATAGATAAATGAAAAATAACAGGCTTTAATTATAGCAATTAGTATGGTATATATAAACAAGAACGAAACAGAAATCAATCAAAATGACAAAGAAAAGAAAAAACATTTCAGAAAAAAGCAAAAAAGTGTGAATGAAATGTAAATAAACGGAAAATGAACATTTTAGTTCAATTAAACGTTTAACATAACACATGACAGGAGCATAAAGGAGGGAGGAAGTTATGGAGAAGGAAAAACTGACAGATG AAAATAAACCGTGATGAACCGCCTCTGATGTCAGGCTTTTGAACTGACTCAGAAGGCGGATTTTTAATTTATAGGAAATTATGTCCTATGAATTAAAAATCCCTCCATGAGTTTATTTGTGAACAGAAGAAGTATTTATGTTC 143 TTerm_1120 NZ_LR027880.1 3619820 3619838 19 3619846 3619864 19 7 94 0 33 55 44 55 44 0 3619841 AAAAAAATCCCCGGATCAC GTGATCCGGGGATTTTCTT True ATGAATTTA TTTTATTCA True True - AAGAAAATCCCCGGATCAC GGAATTG GTGATCCGGGGATTTTTTT TAAATTCAT 90 RIL182_RS17015 intergenic 3619686 3619914 + down GATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTTTTTTATTCATTTATAAGCTGTCATAGCTTCGTATTTTCACTACATTTTCT CGAGAAAAATAATCCGCAGATTTAAGATCTGGAACAAAGCGTCGCTTGCGACTCTTTCGCGCTCGAGCGGTGCTGTTTACAGCTAACTTCTACTCCGCGAGATGCGCATCCCGCCCGGAGGGCTTTTTAATTCATAGGACGTAATTTCCTATGAATTTAAAAAAATCCCCGGATCACCAATTCCGTGATCCGGGGATTTTCTTTTTTATTCATTTATAAGCTGTCATAGCTTCGTATTTTCACTACATTTTCTTACTTTGTAAGCTGTCCTACGACCT AGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTT 94 TTerm_1121 NZ_LR027880.1 3619820 3619838 19 3619846 3619864 19 7 94 0 33 55 44 55 44 0 3619841 AAAAAAATCCCCGGATCAC GTGATCCGGGGATTTTCTT True ATGAATTTA TTTTATTCA True True - AAGAAAATCCCCGGATCAC GGAATTG GTGATCCGGGGATTTTTTT TAAATTCAT 90 RIL182_RS17025 intergenic 3619686 3619914 - down AGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTTTAAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACGCTTTGTTCCAGATC AGGTCGTAGGACAGCTTACAAAGTAAGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTTTAAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCTCGAGCGCGAAAGAGTCGCAAGCGACGCTTTGTTCCAGATCTTAAATCTGCGGATTATTTTTCTCG AGAAAATGTAGTGAAAATACGAAGCTATGACAGCTTATAAATGAATAAAAAAGAAAATCCCCGGATCACGGAATTGGTGATCCGGGGATTTTTT 94 TTerm_1122 NZ_LR027880.1 3628442 3628454 13 3628463 3628475 13 8 84 0 16 23 76 18 81 0 3628458 CCGACAGTCCGGG CCCAGACGGTCGG True AAAAGAAAC CATTGTAAA True False - CCGACCGTCTGGG CGAGATAA CCCGGACTGTCGG GTTTCTTTT 64 RIL182_RS17060 intergenic 3628200 3628592 - down AGCTTTTTTTTGGTACATTTTACCTATTGAAAAAATGAATCAAAAATTATAACATCTAATTGTTATATGACTGACGGAAAAAGTGGAAGAACCACATGAAGTATAACGTTTACAATGCCGACCGTCTGGGCGAGATAACCCGGACTGTCGGTTTCTTTTATTCTTAAAGATATTCTTCTTACAGGAATCCTTTTGTATGAAAAAAAGAACAGTTCCGGAAACGAAGCGGATATTGACAAGCAGTGATGGAACATGATATATTCACAGCGTTAGAACTAGCTAACAAAAGTTAGAAATAACTACCAATATTTTCCAGCAATACAAAAATATTGGGGGATCAGATCCGTTTTATACAGGTAAACCATAGTTTTCAGCAAACAGGAGGAAAAATA GCATAGCAATTTACACAATGATATAAGCTTTTTTTTGGTACATTTTACCTATTGAAAAAATGAATCAAAAATTATAACATCTAATTGTTATATGACTGACGGAAAAAGTGGAAGAACCACATGAAGTATAACGTTTACAATGCCGACCGTCTGGGCGAGATAACCCGGACTGTCGGTTTCTTTTATTCTTAAAGATATTCTTCTTACAGGAATCCTTTTGTATGAAAAAAAGAACAGTTCCGGAAACGAAGCGGATATTGACAAGCAGTGATGGAACATGATATATTCACAGCGTTAGAACTAGCTAACAAAAGTTAGAAATAACTACCAATATTTTCCAGCAATACAAAAATATTGGGGGATCAGATCCGTTTTATACAGGTAAACCATAGTTTTCAGCAAACAGGAGGAAAAATAATGCAAAACGAATGGAGAGATTTTA AGCTTTTTTTTGGTACATTTTACCTATTGAAAAAATGAATCAAAAATTATAACATCTAATTGTTATATGACTGACGGAAAAAGTGGAAGAACCACATGAAGTATAACGTTTACAATGCCGACCGTCTGGGCGAGATAACCCGGACTGTCG 150 TTerm_1123 NZ_LR027880.1 3631145 3631162 18 3631171 3631188 18 8 94 0 31 75 25 76 23 0 3631166 ATAAAAAATGGTAACAGT ACTGTCACCATTTTTTAT True TTACCGCAA ATGGGCATT True True - ATAAAAAATGGTGACAGT TCAGACGG ACTGTTACCATTTTTTAT TTGCGGTAA 86 RIL182_RS17070 intergenic 3631134 3631175 + down TATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGT CGCCCCGGTGGAGGAAATGAAGTAATATTACCGCAATAAAAAATGGTAACAGTCCGTCTGAACTGTCACCATTTTTTATATGGGCATTTTG ACAGTTCAGACGGACTGTTACCATTTTTTA 30 TTerm_1124 NZ_LR027880.1 3631145 3631162 18 3631171 3631188 18 8 94 0 31 75 25 76 23 0 3631166 ATAAAAAATGGTAACAGT ACTGTCACCATTTTTTAT True TTACCGCAA ATGGGCATT True True - ATAAAAAATGGTGACAGT TCAGACGG ACTGTTACCATTTTTTAT TTGCGGTAA 86 RIL182_RS17075 intergenic 3631134 3631175 - down ACAGTTCAGACGGACTGTTACCATTTTTTATTGCGGTAATA CAAAATGCCCATATAAAAAATGGTGACAGTTCAGACGGACTGTTACCATTTTTTATTGCGGTAATATTACTTCATTTCCTCCACCGGGGCG ACAGTTCAGACGGACTGTTACCATTTTTTA 30 TTerm_1125 NZ_LR027880.1 3648808 3648818 11 3648824 3648834 11 5 100 0 22 36 63 36 63 0 3648820 GTGCACGGAAG CTTCCGTGCAC True CACAAAAAG CAACGGTAT True False - GTGCACGGAAG ATGAC CTTCCGTGCAC CTTTTTGTG 76 RIL182_RS17125 intergenic 3648718 3648948 - down AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACC TGACGGAGATTATGCTGCCGCTGTAAAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACCATGAACCAACCGAAAACTTACACCG AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCA 140 TTerm_1126 NZ_LR027880.1 3648873 3648878 6 3648884 3648889 6 5 100 0 12 33 66 33 66 0 3648880 GGTGTG CACACC True AATAAAAAG GGTCTGCCA True False - GGTGTG TCAGC CACACC CTTTTTATT 56 RIL182_RS17125 intergenic 3648718 3648948 - down AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACC TGACGGAGATTATGCTGCCGCTGTAAAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACCATGAACCAACCGAAAACTTACACCG AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACAC 75 TTerm_1127 NZ_LR027880.1 3648876 3648884 9 3648891 3648899 9 6 88 0 13 33 66 25 75 0 3648887 GTGGCTGAC GTCTGCCAC True AAAAAGGTG CACAACCTG True False - GTGGCAGAC CGGTGT GTCAGCCAC CACCTTTTT 58 RIL182_RS17125 intergenic 3648718 3648948 - down AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACC TGACGGAGATTATGCTGCCGCTGTAAAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCACACCTTTTTATTCCAGCCTTTTGTATATTGGCGATACCGTTGGTGCACGGAAGATGACCTTCCGTGCACTTTTTGTGTGAAAGTTCAAAAAGCTGATAGAGTATAGACATAGAAGTGATATCACACCACCACACCCAAAACGAGAGGAGTCATCAACCATGAACCAACCGAAAACTTACACCG AAAGTTTTCGGAAAAAGCTGGTGGGAAAAGGTGTGGCCGTCAGGTTGTGGTGGCAGACCGGTGTGTCAGCCA 72 TTerm_1128 NZ_LR027880.1 3657499 3657511 13 3657518 3657530 13 6 100 0 26 53 46 53 46 0 3657514 AAACCCCGGAAAA TTTTCCGGGGTTT True GTATAAGAA GTAAACATA True False - AAACCCCGGAAAA TCAAGG TTTTCCGGGGTTT TTCTTATAC 68 RIL182_RS17170 intergenic 3657242 3657564 - down ATTATCTCGAAAGAGACAATCGAATTATGTTTACAAACCCCGGAAAATCAAGGTTTTCCGGGGTTTTCTTATACCCAAACGGGTTGATATGTTTCAAAGTGAAGTTCCTTAAATCTTTGAAGCCGCAAAATGATGCAAGCTCTTTCTTTGATTTGGATTCTATGCAGAAAGCCAAAATTTGCGTAGACCACTTCCGCGGCGTTCCATGTATTTCATGCGGTGAAAATTCCTTTGCGATTTTTTGGTTGACAATGTCAAAATTACATAGTATCCCCACTCGCTTGAAACCTTGAAGCGTTCTGGCGCGGCGGAGATCGAGCAA GCGCTCCACAGTTTTCAAAGAGATAATTATCTCGAAAGAGACAATCGAATTATGTTTACAAACCCCGGAAAATCAAGGTTTTCCGGGGTTTTCTTATACCCAAACGGGTTGATATGTTTCAAAGTGAAGTTCCTTAAATCTTTGAAGCCGCAAAATGATGCAAGCTCTTTCTTTGATTTGGATTCTATGCAGAAAGCCAAAATTTGCGTAGACCACTTCCGCGGCGTTCCATGTATTTCATGCGGTGAAAATTCCTTTGCGATTTTTTGGTTGACAATGTCAAAATTACATAGTATCCCCACTCGCTTGAAACCTTGAAGCGTTCTGGCGCGGCGGAGATCGAGCAAGTGGCAGCTTCAGATACAGTGAAAA ATTATCTCGAAAGAGACAATCGAATTATGTTTACAAACCCCGGAAAATCAAGGTTTTCCGGGGTT 65 TTerm_1129 NZ_LR027880.1 3659814 3659827 14 3659832 3659845 14 4 85 0 18 64 35 66 33 0 3659829 AGAAGCGTAAAACA TGTCTTATGCTTCT True AAAAAGAAA CCCATCTTA True False - AGAAGCATAAGACA GAGA TGTTTTACGCTTCT TTTCTTTTT 52 RIL182_RS17185 intergenic 3659823 3659956 + down AACATCTCTGTCTTATGCTTCTCCCATCTTAGCCGTATTTCATTTATTTTTGGTATGCACCGTGCATACATTTTCACATTATATAATGTTGAGTTCAAATAGTAAGTTCAATTTTTGACTGTCAAATTACATT GGCGGACAAAAAGAAAGAAGCGTAAAACATCTCTGTCTTATGCTTCTCCCATCTTAGCCGTATTTCATTTATTTTTGGTATGCACCGTGCATACATTTTCACATTATATAATGTTGAGTTCAAATAGTAAGTTCAATTTTTGACTGTCAAATTACATTTAAAATAATATTGCTTCTAAGATCG AATGTAATTTGACAGTCAAAAATTGAACTTACTATTTGAACTCAACATTATATAATGTGAAAATGTATGCACGGTGCATACCAAAAATAAATGAAATACGGCTAAGATGGGAGAAGCATAAGACAGAGATGTTTTACGCTTC 142 TTerm_1130 NZ_LR027880.1 3659814 3659827 14 3659832 3659845 14 4 85 0 18 64 35 66 33 0 3659829 AGAAGCGTAAAACA TGTCTTATGCTTCT True AAAAAGAAA CCCATCTTA True False - AGAAGCATAAGACA GAGA TGTTTTACGCTTCT TTTCTTTTT 52 RIL182_RS17190 intergenic 3659823 3659956 - down AATGTAATTTGACAGTCAAAAATTGAACTTACTATTTGAACTCAACATTATATAATGTGAAAATGTATGCACGGTGCATACCAAAAATAAATGAAATACGGCTAAGATGGGAGAAGCATAAGACAGAGATGTT CGATCTTAGAAGCAATATTATTTTAAATGTAATTTGACAGTCAAAAATTGAACTTACTATTTGAACTCAACATTATATAATGTGAAAATGTATGCACGGTGCATACCAAAAATAAATGAAATACGGCTAAGATGGGAGAAGCATAAGACAGAGATGTTTTACGCTTCTTTCTTTTTGTCCGCC AATGTAATTTGACAGTCAAAAATTGAACTTACTATTTGAACTCAACATTATATAATGTGAAAATGTATGCACGGTGCATACCAAAAATAAATGAAATACGGCTAAGATGGGAGAAGCATAAGACAGAGATGTTTTACGCTTC 142 TTerm_1131 NZ_LR027880.1 3674481 3674506 26 3674515 3674540 26 8 80 0 27 51 48 52 47 0 3674510 AAAAAAATCCGGTTCCCCGCTGCCAG CTGACAGTGTGAAACCGGATTTTCTT True CAACGTACA TTCTTCATA True True - AAGAAAATCCGGTTTCACACTGTCAG GTAAAAAT CTGGCAGCGGGGAACCGGATTTTTTT TGTACGTTG 78 RIL182_RS17260 intergenic 3674422 3674620 - down GATAACAGATTGTACGCTTTTGTGCAATTTGACAGACCTAAAATTGAAAACCACCTTTTGACACACGAATCTATGAAGAAAAGAAAATCCGGTTTCACACTGTCAGGTAAAAATCTGGCAGCGGGGAACCGGATTTTTTTGTACGTTGCAACAAGGTTTTTTCTTCGCTATAATGAAAAAAATGGAGGCAAAAAACAG TTATCGTAAGACATATTTTGCGGTAGATAACAGATTGTACGCTTTTGTGCAATTTGACAGACCTAAAATTGAAAACCACCTTTTGACACACGAATCTATGAAGAAAAGAAAATCCGGTTTCACACTGTCAGGTAAAAATCTGGCAGCGGGGAACCGGATTTTTTTGTACGTTGCAACAAGGTTTTTTCTTCGCTATAATGAAAAAAATGGAGGCAAAAAACAGATGAAGATTTTACTTACGGCGATCA GATAACAGATTGTACGCTTTTGTGCAATTTGACAGACCTAAAATTGAAAACCACCTTTTGACACACGAATCTATGAAGAAAAGAAAATCCGGTTTCACACTGTCAGGTAAAAATCTGGCAGCGGGGAACCGGATTTTTT 139 TTerm_1132 NZ_LR027880.1 3680103 3680113 11 3680118 3680128 11 4 90 0 17 68 31 70 30 0 3680115 AGACTGAATCT AGATTCAATCT True AAAAAAAAA AATTTCTCT True False - AGATTGAATCT TTTC AGATTCAGTCT TTTTTTTTT 50 RIL182_RS17275 intergenic 3680062 3680217 - down ACCTTTGTTCCATATATACAATCAGAATCAAATGTTAACTTTAATATACATTTTGGGCAATTTGTATAATAAGATACTACAGAGAAATTAGATTGAATCTTTTCAGATTCAGTCTTTTTTTTTACACTAAAAGAAATTGTGGCAGGGAGAAATGT TGGAAGATATTTTAGCGGAACTTTAACCTTTGTTCCATATATACAATCAGAATCAAATGTTAACTTTAATATACATTTTGGGCAATTTGTATAATAAGATACTACAGAGAAATTAGATTGAATCTTTTCAGATTCAGTCTTTTTTTTTACACTAAAAGAAATTGTGGCAGGGAGAAATGTATGCCACAGGAAAATAAAAAGAAAG ACCTTTGTTCCATATATACAATCAGAATCAAATGTTAACTTTAATATACATTTTGGGCAATTTGTATAATAAGATACTACAGAGAAATTAGATTGAATCTTTTCAGATTCAGTC 114 TTerm_1133 NZ_LR027880.1 3683908 3683928 21 3683936 3683956 21 7 100 0 42 66 33 66 33 0 3683931 AAAAAGTGTCCCTGAAAATCT AGATTTTCAGGGACACTTTTT True ACGAACCAA ATATCTGTT True True - AAAAAGTGTCCCTGAAAATCT GGATAAA AGATTTTCAGGGACACTTTTT TTGGTTCGT 92 RIL182_RS17290 intergenic 3683853 3683989 + down CGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTTATATCTGTTTCTCTTTCTTTCCGCTTAATCACT CAATGAAGGTAAAATTACAGTATAGCGCAGTCTGGGCAATCAGATGCAGCTTGCTCAAATATTCTATTATCACGAACCAAAAAAGTGTCCCTGAAAATCTTTTATCCAGATTTTCAGGGACACTTTTTATATCTGTTTCTCTTTCTTTCCGCTTAATCACTTAATCGATTTCTTTATAATCTACGT AGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTT 81 TTerm_1134 NZ_LR027880.1 3683908 3683928 21 3683936 3683956 21 7 100 0 42 66 33 66 33 0 3683931 AAAAAGTGTCCCTGAAAATCT AGATTTTCAGGGACACTTTTT True ACGAACCAA ATATCTGTT True True - AAAAAGTGTCCCTGAAAATCT GGATAAA AGATTTTCAGGGACACTTTTT TTGGTTCGT 92 RIL182_RS17295 intergenic 3683853 3683989 - down AGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTTTTGGTTCGTGATAATAGAATATTTGAGCAAGCTGCATCTGATTGCCCAGACTGCG ACGTAGATTATAAAGAAATCGATTAAGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTTTTGGTTCGTGATAATAGAATATTTGAGCAAGCTGCATCTGATTGCCCAGACTGCGCTATACTGTAATTTTACCTTCATTG AGTGATTAAGCGGAAAGAAAGAGAAACAGATATAAAAAGTGTCCCTGAAAATCTGGATAAAAGATTTTCAGGGACACTTTT 81 TTerm_1135 NZ_LR027880.1 3689059 3689078 20 3689084 3689103 20 5 85 0 25 47 52 47 52 0 3689080 GCCTGCCCTCATAATCTGTG CACATCTTATGAGGACAGGC True TCAAAAAAG CATAATTCA True False - GCCTGTCCTCATAAGATGTG GTAAT CACAGATTATGAGGGCAGGC CTTTTTTGA 74 RIL182_RS17315 intergenic 3689029 3689128 - down GGCGAATCCGTTGTCATGAATTATGGCCTGTCCTCATAAGATGTGGTAATCACAGATTATGAGGGCAGGCTTTTTTGAATTCATAGGAAATTATGTCCT TCGTTGGCAAATTTGTTTTAAGATAGGCGAATCCGTTGTCATGAATTATGGCCTGTCCTCATAAGATGTGGTAATCACAGATTATGAGGGCAGGCTTTTTTGAATTCATAGGAAATTATGTCCTATGAATTCAAAAGCCCTCCGCCGGG GGCGAATCCGTTGTCATGAATTATGGCCTGTCCTCATAAGATGTGGTAATCACAGATTATGAGGGCAGG 69 TTerm_1136 NZ_LR027880.1 3690921 3690930 10 3690938 3690947 10 7 90 0 15 95 5 100 0 0 3690933 TTCAAAATTA TAATTTTTAA True ATTAAAATT TGAATTAAA True False - TTAAAAATTA TAATAAG TAATTTTGAA AATTTTAAT 30 RIL182_RS17320 intergenic 3690816 3691002 - down ATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAAGTAATTTTGAAATTTTAATGAAAACAAAATGCATTTCAAATAAAATTGTGCTATAATTCTGAAAAACACTAAGAAGGGGAAACCGTGTTCAAATTTGATACGGAAGAAAGGTACG TACCGGTTCGATTCCGGTCGCCGGCATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAAGTAATTTTGAAATTTTAATGAAAACAAAATGCATTTCAAATAAAATTGTGCTATAATTCTGAAAAACACTAAGAAGGGGAAACCGTGTTCAAATTTGATACGGAAGAAAGGTACGATGAAACAGGAAAAAGTAACATTCA ATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAAGTAATTTTGA 81 TTerm_1137 NZ_LR027880.1 3690931 3690942 12 3690950 3690961 12 7 91 0 19 91 8 90 9 0 3690945 CTTATTATAATT AATTAAAATAAG True CAAAATTAC ACCCTGTTA True False - CTTATTTTAATT CATTAAA AATTATAATAAG GTAATTTTG 38 RIL182_RS17320 intergenic 3690816 3691002 - down ATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAAGTAATTTTGAAATTTTAATGAAAACAAAATGCATTTCAAATAAAATTGTGCTATAATTCTGAAAAACACTAAGAAGGGGAAACCGTGTTCAAATTTGATACGGAAGAAAGGTACG TACCGGTTCGATTCCGGTCGCCGGCATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAAGTAATTTTGAAATTTTAATGAAAACAAAATGCATTTCAAATAAAATTGTGCTATAATTCTGAAAAACACTAAGAAGGGGAAACCGTGTTCAAATTTGATACGGAAGAAAGGTACGATGAAACAGGAAAAAGTAACATTCA ATTATAGAGATTCTTCTAAAGAGAGATCCTGTTAACAGGGTCTTATTTTAATTCATTAAAAATTATAATAA 71 TTerm_1138 NZ_LR027880.1 3695744 3695756 13 3695762 3695774 13 5 100 0 26 76 23 76 23 0 3695758 AAAAAGATAGCTA TAGCTATCTTTTT True TTTCAGAAA AGGAGAAGG True True - AAAAAGATAGCTA GCCGA TAGCTATCTTTTT TTTCTGAAA 68 RIL182_RS17335 intergenic 3695707 3695978 + down CCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTTAGGAGAAGGTATTTTTACTATGGGGTATAGCAAAAAATATATATAATGTATTGGGGGGTTTTTACAGTAATTATAATAGCATGAGCGGCAGGATAAGTGTGCACAAATTTGAAGTTTTTTTACCGCCCAAACTATACAAAATAAACAGTACCTTAGTACCGGTTTAAAAACTGGTACTAAAATTATGCACAAACGATTGCGCAT CACTTTTGCGAACAAACAAAAATAACCATGCGATTTTAACCGCATGGTTATTTTTTCAGAAAAAAAGATAGCTATCGGCTAGCTATCTTTTTAGGAGAAGGTATTTTTACTATGGGGTATAGCAAAAAATATATATAATGTATTGGGGGGTTTTTACAGTAATTATAATAGCATGAGCGGCAGGATAAGTGTGCACAAATTTGAAGTTTTTTTACCGCCCAAACTATACAAAATAAACAGTACCTTAGTACCGGTTTAAAAACTGGTACTAAAATTATGCACAAACGATTGCGCATCAGATTTCCCAATAGTTTTCATGGA ATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTT 234 TTerm_1139 NZ_LR027880.1 3695744 3695756 13 3695762 3695774 13 5 100 0 26 76 23 76 23 0 3695758 AAAAAGATAGCTA TAGCTATCTTTTT True TTTCAGAAA AGGAGAAGG True True - AAAAAGATAGCTA GCCGA TAGCTATCTTTTT TTTCTGAAA 68 RIL182_RS17340 intergenic 3695707 3695978 - down ATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTTTTTCTGAAAAAATAACCATGCGGTTAAAATCGCATGG TCCATGAAAACTATTGGGAAATCTGATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTTTTTCTGAAAAAATAACCATGCGGTTAAAATCGCATGGTTATTTTTGTTTGTTCGCAAAAGTG ATGCGCAATCGTTTGTGCATAATTTTAGTACCAGTTTTTAAACCGGTACTAAGGTACTGTTTATTTTGTATAGTTTGGGCGGTAAAAAAACTTCAAATTTGTGCACACTTATCCTGCCGCTCATGCTATTATAATTACTGTAAAAACCCCCCAATACATTATATATATTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAAGATAGCTAGCCGATAGCTATCTTTT 234 TTerm_1140 NZ_LR027880.1 3705025 3705038 14 3705043 3705056 14 4 92 0 23 67 32 69 30 0 3705040 AAAAATGAAACCTG CAGGTTCCATTTTT True ATGACAAAA AGGAGAAGG True True - AAAAATGGAACCTG ACCC CAGGTTTCATTTTT TTTTGTCAT 70 RIL182_RS17380 intergenic 3704776 3705249 - down ATTGTGCATATTTTTCTGTTCTCACAAAAATATGATACCAAGGTACTGTACAATATGCATAAAAACAATGATGAAAAATTGTGAACTTTGTGCACACTTATTTGCGGGGGCATGCTATTATAATAACCGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAATGGAACCTGACCCCAGGTTTCATTTTTTTTGTCATTTTTTAATCTGTAATCAGAGCACATCTTTTGAAATACACAACCCCATAAATAATTGAAAAAATTTTCCAATTATATCTTGACACATCAGCGAACTAAAGTTATAATCCTAGTAATCTTATAGGAAATATATGAAAAAGAAAAAATAAAGGAACAGATGATAAGATATTAAGACAGTTTTACAGGACAGCAGACACAGATTTTACCTGTGCGTGACGCAGGTTTTACGGAGTGGAGGGACA AGTTTGAGGCGTTATTTGATAAGTAATTGTGCATATTTTTCTGTTCTCACAAAAATATGATACCAAGGTACTGTACAATATGCATAAAAACAATGATGAAAAATTGTGAACTTTGTGCACACTTATTTGCGGGGGCATGCTATTATAATAACCGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAATGGAACCTGACCCCAGGTTTCATTTTTTTTGTCATTTTTTAATCTGTAATCAGAGCACATCTTTTGAAATACACAACCCCATAAATAATTGAAAAAATTTTCCAATTATATCTTGACACATCAGCGAACTAAAGTTATAATCCTAGTAATCTTATAGGAAATATATGAAAAAGAAAAAATAAAGGAACAGATGATAAGATATTAAGACAGTTTTACAGGACAGCAGACACAGATTTTACCTGTGCGTGACGCAGGTTTTACGGAGTGGAGGGACAATGAGAAAGAGGATGGCAGCAATCC ATTGTGCATATTTTTCTGTTCTCACAAAAATATGATACCAAGGTACTGTACAATATGCATAAAAACAATGATGAAAAATTGTGAACTTTGTGCACACTTATTTGCGGGGGCATGCTATTATAATAACCGTAAAAACCCCCCAATACATTATATATAGTTTTTGCTATACCCCATAGTAAAAATACCTTCTCCTAAAAATGGAACCTGACCCCAGGTTTCATTTT 224 TTerm_1141 NZ_LR027880.1 3728754 3728763 10 3728771 3728780 10 7 100 0 20 70 30 70 30 0 3728766 AAGGTCATAA TTATGACCTT True CCACAAAAA CATAAACAT True False - AAGGTCATAA AATACCC TTATGACCTT TTTTTGTGG 48 RIL182_RS17490 intergenic 3728715 3728897 - down AGAGATATCTGAAATACAAAACTCATTTGTCTTCACAAAAAGTTTAGACAATTTTATATAAATTAAATGGGATTTGAAATTTTTCATGCTATAATAGGTCATAAAGGTATGTTTATGAAGGTCATAAAATACCCTTATGACCTTTTTTGTGGGAACAGAAACCGGAAAGGCGAACATGTAAT CTGAGACATTAAAAAAATATCTGTAAGAGATATCTGAAATACAAAACTCATTTGTCTTCACAAAAAGTTTAGACAATTTTATATAAATTAAATGGGATTTGAAATTTTTCATGCTATAATAGGTCATAAAGGTATGTTTATGAAGGTCATAAAATACCCTTATGACCTTTTTTGTGGGAACAGAAACCGGAAAGGCGAACATGTAATATGAAACTGAAATCAAAAATCATCA AGAGATATCTGAAATACAAAACTCATTTGTCTTCACAAAAAGTTTAGACAATTTTATATAAATTAAATGGGATTTGAAATTTTTCATGCTATAATAGGTCATAAAGGTATGTTTATGAAGGTCATAAAATACCCTTATGACCT 143 TTerm_1142 NZ_LR027880.1 3731580 3731588 9 3731594 3731602 9 5 88 0 13 27 72 25 75 0 3731590 CGCAGCACC GGTTCTGCG True AGTAAAAAC GAGAACGAT True False - CGCAGAACC TCTGC GGTGCTGCG GTTTTTACT 50 RIL182_RS17495 intergenic 3731572 3731611 + down GTAAAAACGCAGCACCGCAGAGGTTCTGCGGAGAACGAT TCTGCATATTCAGAGTATTCTGTAAGTAAAAACGCAGCACCGCAGAGGTTCTGCGGAGAACGATCACAGTTTCTGATCGTTCTCCAGCA ATCGTTCTCCGCAGAACCTCTGCGGTGCTGC 31 TTerm_1143 NZ_LR027880.1 3731580 3731588 9 3731594 3731602 9 5 88 0 13 27 72 25 75 0 3731590 CGCAGCACC GGTTCTGCG True AGTAAAAAC GAGAACGAT True False - CGCAGAACC TCTGC GGTGCTGCG GTTTTTACT 50 RIL182_RS17500 intergenic 3731572 3731611 - down ATCGTTCTCCGCAGAACCTCTGCGGTGCTGCGTTTTTAC TGCTGGAGAACGATCAGAAACTGTGATCGTTCTCCGCAGAACCTCTGCGGTGCTGCGTTTTTACTTACAGAATACTCTGAATATGCAGA ATCGTTCTCCGCAGAACCTCTGCGGTGCTGC 31 TTerm_1144 NZ_LR027880.1 3736153 3736168 16 3736175 3736190 16 6 93 0 27 65 34 66 33 0 3736171 AAAAAAACGTCGAAAG CTTTCGACGTTTTCTT True ATTTTCATA TTTACTCTG True True - AAGAAAACGTCGAAAG CACAGT CTTTCGACGTTTTTTT TATGAAAAT 78 RIL182_RS17525 intergenic 3736118 3736192 - down AAAAGAAAACGTCGAAAGCACAGTCTTTCGACGTTTTTTTATGAAAATGGGAAGTTTATAGCGGGAGAAAACAG GCACGACGGAGCAGGCAACAGAGTAAAAAGAAAACGTCGAAAGCACAGTCTTTCGACGTTTTTTTATGAAAATGGGAAGTTTATAGCGGGAGAAAACAGATGAAAAAAGACAATATCGTACTGA AAAAGAAAACGTCGAAAGCACAGTCTTTCGACGTTTTTT 39 TTerm_1145 NZ_LR027880.1 3751664 3751681 18 3751688 3751705 18 6 83 0 21 58 41 60 40 0 3751684 TATCAAAAAAGCCGGTAC GTGCCGGCTTTTCTTATA True TTCTGAAAT CAATGGAAT True True - TATAAGAAAAGCCGGCAC GAAAAA GTACCGGCTTTTTTGATA ATTTCAGAA 82 RIL182_RS17580 intergenic 3751651 3751820 + down TTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCC TAAATACAAGGCAGAGCAGAAATAATTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCCTAAAACAGATCAACTCTTCCTGCAA GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGAT 156 TTerm_1146 NZ_LR027880.1 3751664 3751681 18 3751688 3751705 18 6 83 0 21 58 41 60 40 0 3751684 TATCAAAAAAGCCGGTAC GTGCCGGCTTTTCTTATA True TTCTGAAAT CAATGGAAT True True - TATAAGAAAAGCCGGCAC GAAAAA GTACCGGCTTTTTTGATA ATTTCAGAA 82 RIL182_RS17585 intergenic 3751651 3751820 - down GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAA TTGCAGGAAGAGTTGATCTGTTTTAGGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAATTATTTCTGCTCTGCCTTGTATTTA GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGAT 156 TTerm_1147 NZ_LR027880.1 3751742 3751759 18 3751766 3751783 18 6 83 0 21 69 30 73 26 0 3751762 AAAAAGAAACCATCATAC GTATAACGGTTTCTTCTT True GGCATCAAA ATCTCATTT True False - AAGAAGAAACCGTTATAC GAAAGT GTATGATGGTTTCTTTTT TTTGATGCC 50 RIL182_RS17580 intergenic 3751651 3751820 + down TTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCC TAAATACAAGGCAGAGCAGAAATAATTCATTCTGAAATATCAAAAAAGCCGGTACTTTTTCGTGCCGGCTTTTCTTATACAATGGAATGCATGTCTATAAACATTCTGGCATCAAAAAAAGAAACCATCATACACTTTCGTATAACGGTTTCTTCTTATCTCATTTCTATGTAAGTCCGTCTGGCAAACGCTCCTAAAACAGATCAACTCTTCCTGCAA GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTT 78 TTerm_1148 NZ_LR027880.1 3751742 3751759 18 3751766 3751783 18 6 83 0 21 69 30 73 26 0 3751762 AAAAAGAAACCATCATAC GTATAACGGTTTCTTCTT True GGCATCAAA ATCTCATTT True False - AAGAAGAAACCGTTATAC GAAAGT GTATGATGGTTTCTTTTT TTTGATGCC 50 RIL182_RS17585 intergenic 3751651 3751820 - down GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAA TTGCAGGAAGAGTTGATCTGTTTTAGGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTTTTTGATGCCAGAATGTTTATAGACATGCATTCCATTGTATAAGAAAAGCCGGCACGAAAAAGTACCGGCTTTTTTGATATTTCAGAATGAATTATTTCTGCTCTGCCTTGTATTTA GGAGCGTTTGCCAGACGGACTTACATAGAAATGAGATAAGAAGAAACCGTTATACGAAAGTGTATGATGGTTTCTTTT 78 TTerm_1149 NZ_LR027880.1 3758745 3758756 12 3758762 3758773 12 5 91 0 19 79 20 81 18 0 3758758 AAATTTGCGAAA TTTCACAAATTT True TGTCCCGAA GGTGGAAAA True False - AAATTTGTGAAA ATAAA TTTCGCAAATTT TTCGGGACA 54 RIL182_RS17620 intergenic 3758662 3758874 - down AAGAGAGTATTTAGTAGAATAGAATGTATGCAGATTTCCGGTGCTTTCCTAAGGTGCCGGGGAATCTGCCATTCACAACACACCGATACACCTTTTCCACCAAATTTGTGAAAATAAATTTCGCAAATTTTCGGGACAAACCATCCATCTTATAGTATAATAACCGTACTAAAGTAATATAACCACCCCCACACAGGAAAAGGAGAAAAGCG TCGAAAACGCACAAAAACAAAATTGAAGAGAGTATTTAGTAGAATAGAATGTATGCAGATTTCCGGTGCTTTCCTAAGGTGCCGGGGAATCTGCCATTCACAACACACCGATACACCTTTTCCACCAAATTTGTGAAAATAAATTTCGCAAATTTTCGGGACAAACCATCCATCTTATAGTATAATAACCGTACTAAAGTAATATAACCACCCCCACACAGGAAAAGGAGAAAAGCGATGATAAATCCGGCATCAATAATGA AAGAGAGTATTTAGTAGAATAGAATGTATGCAGATTTCCGGTGCTTTCCTAAGGTGCCGGGGAATCTGCCATTCACAACACACCGATACACCTTTTCCACCAAATTTGTGAAAATAAATTTCGCAAATT 129 TTerm_1150 NZ_LR027880.1 3769030 3769051 22 3769057 3769078 22 5 90 0 34 72 27 75 25 0 3769053 AAAACAAGAAGAAAAATTGAGA TCTCACTTTCTCTTCTTGTTTT True CAATTAAAA CTCTGATGA True True - AAAACAAGAAGAGAAAGTGAGA AAGAG TCTCAATTTTTCTTCTTGTTTT TTTTAATTG 92 RIL182_RS17660 intergenic 3768887 3769107 - down ATGAAGTGGGGAAAGTTGAATCATCAGAGAAAACAAGAAGAGAAAGTGAGAAAGAGTCTCAATTTTTCTTCTTGTTTTTTTAATTGATGTTCGGTATACTGAACGATAGTTAGACAAAACTAACAATAGTGTAAATCATGCAGACTCCGGAACCGGAAAGTTGCTACCTTTCCTGCTCCGGTGGGATTGTCTGCAAACGAAGAAAAAGGAGACAGCGGGA CAAGATTTAAAATTAAGGGAAGCTGATGAAGTGGGGAAAGTTGAATCATCAGAGAAAACAAGAAGAGAAAGTGAGAAAGAGTCTCAATTTTTCTTCTTGTTTTTTTAATTGATGTTCGGTATACTGAACGATAGTTAGACAAAACTAACAATAGTGTAAATCATGCAGACTCCGGAACCGGAAAGTTGCTACCTTTCCTGCTCCGGTGGGATTGTCTGCAAACGAAGAAAAAGGAGACAGCGGGAATGAATTATTTAGAGATTGAAAAAG ATGAAGTGGGGAAAGTTGAATCATCAGAGAAAACAAGAAGAGAAAGTGAGAAAGAGTCTCAATTTTTCTTCTTGTTT 77 TTerm_1151 NZ_LR027880.1 3779630 3779638 9 3779644 3779652 9 5 88 0 13 50 50 50 50 0 3779640 AACCCTCTG CAGAGGATT True AAAATGCGA TTACTCCTC True True - AATCCTCTG CTCAC CAGAGGGTT TCGCATTTT 58 RIL182_RS17705 intergenic 3779544 3779662 - down AGAGGAGTAAAATCCTCTGCTCACCAGAGGGTTCGCATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCACCAGGGGGTTCGCATTTTGCTCCGCAAAACAAGGAGGATTATA GACACTATGGAATTGAAGTGGCATAAGAGGAGTAAAATCCTCTGCTCACCAGAGGGTTCGCATTTTGCTCCGCAAAACAAGGAGTAAAATCCTCTGCTCACCAGGGGGTTCGCATTTTGCTCCGCAAAACAAGGAGGATTATAATGTCAATTAGTTTACAGAAAGGAC AGAGGAGTAAAATCCTCTGCTCACCAGAGGGT 32 TTerm_1152 NZ_LR027880.1 3810116 3810128 13 3810136 3810148 13 7 84 0 16 61 38 63 36 0 3810131 TAGACAGAAATGT ACATCTCTGCCTA True TAAAAAAAT AAAAGTATC True False - TAGGCAGAGATGT AAGAAAA ACATTTCTGTCTA ATTTTTTTA 48 RIL182_RS17825 intergenic 3810028 3810166 - down GAAAATAAAGATACTTTTTAGGCAGAGATGTAAGAAAAACATTTCTGTCTATTTTTTTACTTAAAAATGTACATGGACATTATGTGTCCGTGTGGTCTGCTAGAATGAGGATATCAAAAAACAAGGGAGGAAAATGAG AGCTGAGAGAAAAAAGGAAAGAGTAGAAAATAAAGATACTTTTTAGGCAGAGATGTAAGAAAAACATTTCTGTCTATTTTTTTACTTAAAAATGTACATGGACATTATGTGTCCGTGTGGTCTGCTAGAATGAGGATATCAAAAAACAAGGGAGGAAAATGAGATGGAAAAGAGAGAAGAAAAAAACA GAAAATAAAGATACTTTTTAGGCAGAGATGTAAGAAAAACATTTCTGTCT 50 TTerm_1153 NZ_LR027880.1 3813848 3813865 18 3813873 3813890 18 7 94 0 31 61 38 58 41 0 3813868 ACAAAAAGGATGCATCCT AGGAAGCATCCTTTTTGT True GTATACTGA TGTACATCT True True - ACAAAAAGGATGCTTCCT AGTTTAC AGGATGCATCCTTTTTGT TCAGTATAC 86 RIL182_RS17830 intergenic 3813800 3813871 + down GTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAAC GGCACTCGATGCAATTGCAGAATAAGTTAAAGTTTACTGCTTTTTATTGAAATACATAAGAATCGTATACTGACAAAAAGGATGCATCCTGTAAACTAGGAAGCATCCTTTTTGTTGTACA GTTTACAGGATGCATCCTTTTTG 23 TTerm_1154 NZ_LR027880.1 3813848 3813865 18 3813873 3813890 18 7 94 0 31 61 38 58 41 0 3813868 ACAAAAAGGATGCATCCT AGGAAGCATCCTTTTTGT True GTATACTGA TGTACATCT True True - ACAAAAAGGATGCTTCCT AGTTTAC AGGATGCATCCTTTTTGT TCAGTATAC 86 RIL182_RS17835 intergenic 3813800 3813871 - down GTTTACAGGATGCATCCTTTTTGTCAGTATACGATTCTTATGTATTTCAATAAAAAGCAGTAAACTTTAAC TGTACAACAAAAAGGATGCTTCCTAGTTTACAGGATGCATCCTTTTTGTCAGTATACGATTCTTATGTATTTCAATAAAAAGCAGTAAACTTTAACTTATTCTGCAATTGCATCGAGTGCC GTTTACAGGATGCATCCTTTTTG 23 TTerm_1155 NZ_LR027880.1 3818541 3818552 12 3818557 3818568 12 4 83 0 14 50 50 50 50 0 3818554 GACCACCTACCT AGATAAGTGGTC True ATAAAAAAG AGCATATAC True False - GACCACTTATCT TTGC AGGTAGGTGGTC CTTTTTTAT 36 RIL182_RS17860 intergenic 3818215 3818777 - down AAAATGATTGACAAGCGTTACAAACAAGAGTAATCTTAACATAATAATTTTTGAAAGGAGTTTTCTCATGAATAGATTTGCAGTCGGATATTCATATACTGAAATTTATGCTATGCACATTATGAACGTGTATGGTCTTAATTGCGTATGTAAATATTTGAATTGCTAAGATGAGAAAATGGTTCAATAATTAGAATATAGTATATGCTGACCACTTATCTTTGCAGGTAGGTGGTCTTTTTTATCCGAATAAAGTAGTTACAATAATTGAAGAGAAAGAGTGAGCGATATTATGCTACAGAGTGATTTTTTGACAAAGAGACAGAGGCATTAATTGATTTAAATGTTATTTATGGAGCCGGAAAGCATATTACAGACAAATGTATGATTATCTTTTCTAAGGAGATACATACATATTTAGTATCACATTATAAATGTGAAATTATAGGTGAAATTGGCGCTTGTAATGGAAACATTTCAATCTATTGTCTGGATTACAAGGGAGAGAAAATAGCTTTTTATCTGACGGGAATAGGTTCTGCTGTTGCATCCTCTATGTGTT AAAATGATTGACAAGCGTTACAAACAAGAGTAATCTTAACATAATAATTTTTGAAAGGAGTTTTCTCATGAATAGATTTGCAGTCGGATATTCATATACTGAAATTTATGCTATGCACATTATGAACGTGTATGGTCTTAATTGCGTATGTAAATATTTGAATTGCTAAGATGAGAAAATGGTTCAATAATTAGAATATAGTATATGCTGACCACTTATCTTTGCAGGTAGGTGGT 236 TTerm_1156 NZ_LR027880.1 3820887 3820904 18 3820909 3820926 18 4 83 0 21 58 41 60 40 0 3820906 AAGGCGGCACCTATTCTA TAAAATAAGTACCGCCTT True AAAAAAATA GCGTTCATC True False - AAGGCGGTACTTATTTTA GAAA TAGAATAGGTGCCGCCTT TATTTTTTT 42 RIL182_RS17875 intergenic 3820683 3821117 - down GGGTTTGACCACAAGATGTTGTACTCCACGGGCAAAAATTAGACCGAAAATTGGCTAGTTTTTGCCCGATTTTTTTGCCCGTTTTTAAAGATGCATAGGGGTAAAAAAGAGGTTTTTGAGTGATTTGGAGAAAAACAAAAAGGAGGGAGTGGTAAGCAAAGTTAAAAATGAATATGGGCAGGGATGAACGCAAGGCGGTACTTATTTTAGAAATAGAATAGGTGCCGCCTTATTTTTTTGGAGGTGGAAATGTCAAAATTATTTTGTGTGAGTCCGGGACTTCGGGTGCTGGAAAGGCATCCCGTTAGTCATCGCAGGAGCCTATGCCTTTCTGACCATACAGGTGGAGGATACGACCATTATGGATTTTATCCGGTATGCCTGTGCTTATTTTTTCATGGATCAGCAGCAATATGAATGGAGGTACACACCGG ATTGTGGAAAAGAGAAGAAAAAGTAGGGTTTGACCACAAGATGTTGTACTCCACGGGCAAAAATTAGACCGAAAATTGGCTAGTTTTTGCCCGATTTTTTTGCCCGTTTTTAAAGATGCATAGGGGTAAAAAAGAGGTTTTTGAGTGATTTGGAGAAAAACAAAAAGGAGGGAGTGGTAAGCAAAGTTAAAAATGAATATGGGCAGGGATGAACGCAAGGCGGTACTTATTTTAGAAATAGAATAGGTGCCGCCTTATTTTTTTGGAGGTGGAAATGTCAAAATTATTTTGTGTGAGTCCGGGACTTCGGGTGCTGGAAAGGCATCCCGTTAGTCATCGCAGGAGCCTATGCCTTTCTGACCATACAGGTGGAGGATACGACCATTATGGATTTTATCCGGTATGCCTGTGCTTATTTTTTCATGGATCAGCAGCAATATGAATGGAGGTACACACCGGATGAGTAAAAAGAACATGGAATCCA GGGTTTGACCACAAGATGTTGTACTCCACGGGCAAAAATTAGACCGAAAATTGGCTAGTTTTTGCCCGATTTTTTTGCCCGTTTTTAAAGATGCATAGGGGTAAAAAAGAGGTTTTTGAGTGATTTGGAGAAAAACAAAAAGGAGGGAGTGGTAAGCAAAGTTAAAAATGAATATGGGCAGGGATGAACGCAAGGCGGTACTTATTTTAGAAATAGAATAGGTGCCGCCT 230 TTerm_1157 NZ_LR027880.1 3823920 3823936 17 3823944 3823960 17 7 76 0 14 82 17 84 15 0 3823939 GCTTTTAAAATTTATTT AAATACATGAAAAAAGC True CTGCATCAG GACAGTCTG True False - GCTTTTTTCATGTATTT TTAAATC AAATAAATTTTAAAAGC CTGATGCAG 36 RIL182_RS17885 intergenic 3823938 3823986 + down TTTAAAAATACATGAAAAAAGCGACAGTCTGATTTACATTTTGTATTT GCATCAGCTTTTAAAATTTATTTGATTTAAAAATACATGAAAAAAGCGACAGTCTGATTTACATTTTGTATTTCAGGAAACTGCCGCTTCTTTTTCTT AAATACAAAATGTAAATCAGACTGTCGCTTTTTTCATGTATTTTTAAATCAAATAAATTTTAAAAG 66 TTerm_1158 NZ_LR027880.1 3823920 3823936 17 3823944 3823960 17 7 76 0 14 82 17 84 15 0 3823939 GCTTTTAAAATTTATTT AAATACATGAAAAAAGC True CTGCATCAG GACAGTCTG True False - GCTTTTTTCATGTATTT TTAAATC AAATAAATTTTAAAAGC CTGATGCAG 36 RIL182_RS22000 intergenic 3823938 3823986 - down AAATACAAAATGTAAATCAGACTGTCGCTTTTTTCATGTATTTTTAAA AAGAAAAAGAAGCGGCAGTTTCCTGAAATACAAAATGTAAATCAGACTGTCGCTTTTTTCATGTATTTTTAAATCAAATAAATTTTAAAAGCTGATGC AAATACAAAATGTAAATCAGACTGTCGCTTTTTTCATGTATTTTTAAATCAAATAAATTTTAAAAG 66 TTerm_1159 NZ_LR027880.1 3838158 3838167 10 3838177 3838186 10 9 100 0 20 40 60 40 60 0 3838171 GGCGTATGGA TCCATACGCC True GTTTAAAAG CAATTCACT True False - GGCGTATGGA ACTTTTAAA TCCATACGCC CTTTTAAAC 56 RIL182_RS17950 intergenic 3838111 3838243 + down TCATCATCGAGTAGATAATATGCTCTTACAACTCTCTTGTTTAAAAGGCGTATGGATTTAAAAGTTCCATACGCCCAATTCACTTTAACCAGTTACAATCTGCCATGTTTTCTTGTATAAAACCACATTCAT AAGGTCATATGATATGGAATTATAATCATCATCGAGTAGATAATATGCTCTTACAACTCTCTTGTTTAAAAGGCGTATGGATTTAAAAGTTCCATACGCCCAATTCACTTTAACCAGTTACAATCTGCCATGTTTTCTTGTATAAAACCACATTCATTATAATGCTGAGATTCTTTGTTGCA ATGAATGTGGTTTTATACAAGAAAACATGGCAGATTGTAACTGGTTAAAGTGAATTGGGCGTATGGAACTTTTAAATCCATACGC 85 TTerm_1160 NZ_LR027880.1 3838158 3838167 10 3838177 3838186 10 9 100 0 20 40 60 40 60 0 3838171 GGCGTATGGA TCCATACGCC True GTTTAAAAG CAATTCACT True False - GGCGTATGGA ACTTTTAAA TCCATACGCC CTTTTAAAC 56 RIL182_RS17955 intergenic 3838111 3838243 - down ATGAATGTGGTTTTATACAAGAAAACATGGCAGATTGTAACTGGTTAAAGTGAATTGGGCGTATGGAACTTTTAAATCCATACGCCTTTTAAACAAGAGAGTTGTAAGAGCATATTATCTACTCGATGATGA TGCAACAAAGAATCTCAGCATTATAATGAATGTGGTTTTATACAAGAAAACATGGCAGATTGTAACTGGTTAAAGTGAATTGGGCGTATGGAACTTTTAAATCCATACGCCTTTTAAACAAGAGAGTTGTAAGAGCATATTATCTACTCGATGATGATTATAATTCCATATCATATGACCTT ATGAATGTGGTTTTATACAAGAAAACATGGCAGATTGTAACTGGTTAAAGTGAATTGGGCGTATGGAACTTTTAAATCCATACGC 85 TTerm_1161 NZ_LR027880.1 3839754 3839765 12 3839774 3839785 12 8 83 0 14 100 0 100 0 0 3839769 AAATTTTAAATT AATATAAATTTT True ATAATTAAA AATCTGTTA True True - AAAATTTATATT AAGAAATG AATTTAAAATTT TTTAATTAT 28 RIL182_RS17960 intergenic 3839709 3839876 - down AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATA TGTTGAAAGAATTAGTGTATATTTAAAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATAATGGATAGAATTGCATTAGTAATCG AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATT 122 TTerm_1162 NZ_LR027880.1 3839758 3839768 11 3839777 3839787 11 8 81 0 12 95 4 100 0 0 3839772 TTTAAATTCAT ATAAATTTTAA True TTAAAAATT TCTGTTATT True False - TTAAAATTTAT ATTAAGAA ATGAATTTAAA AATTTTTAA 24 RIL182_RS17960 intergenic 3839709 3839876 - down AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATA TGTTGAAAGAATTAGTGTATATTTAAAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATAATGGATAGAATTGCATTAGTAATCG AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAA 118 TTerm_1163 NZ_LR027880.1 3839846 3839856 11 3839861 3839871 11 4 90 0 17 50 50 50 50 0 3839858 TGAAAAGCTCC GGAGCTTTCCA True ACAAACACT CGCTTTAAA True False - TGGAAAGCTCC TTCG GGAGCTTTTCA AGTGTTTGT 66 RIL182_RS17960 intergenic 3839709 3839876 - down AAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATA TGTTGAAAGAATTAGTGTATATTTAAAGCGTGGAAAGCTCCTTCGGGAGCTTTTCAGTGTTTGTAAGAGTTTATATAAAATGGGCTAAGAAGGTGGTATGATCAAAATAACAGATTAAAATTTATATTAAGAAATGAATTTAAAATTTTTAATTATGAAATAAAACGTAAGATAATTTCAGAGGTGAGAATAATGGATAGAATTGCATTAGTAATCG AAGCGTGGAAAGCTCCTTCGGGAGCTTTTC 30 TTerm_1164 NZ_LR027880.1 3851322 3851332 11 3851341 3851351 11 8 100 0 22 63 36 63 36 0 3851336 AAAAAGCAAGG CCTTGCTTTTT True TCTAACGCA ATCCAACAC True True - AAAAAGCAAGG TCTGAGTG CCTTGCTTTTT TGCGTTAGA 76 RIL182_RS18005 intergenic 3851197 3851414 - down AGCAGCAAAAAAATATAAGAGTAGAAAAAATATCAGAAGTTTAAGAAAAATTATGTGTTGGATAAAAAGCAAGGTCTGAGTGCCTTGCTTTTTGCGTTAGAACTTTTATAATACCAATTATAACTAAAAAACAGCATGCAAATGAGAAAAACCCACATTTAAATGTTGATTTAATGCGAAAAATACATATAATAGAAAAGAAGATGAGGTAGCAATT AGACATTGGAGAAGATGACAAGGTAAGCAGCAAAAAAATATAAGAGTAGAAAAAATATCAGAAGTTTAAGAAAAATTATGTGTTGGATAAAAAGCAAGGTCTGAGTGCCTTGCTTTTTGCGTTAGAACTTTTATAATACCAATTATAACTAAAAAACAGCATGCAAATGAGAAAAACCCACATTTAAATGTTGATTTAATGCGAAAAATACATATAATAGAAAAGAAGATGAGGTAGCAATTATGTTGATACAGTTTAGTTTTAAAA AGCAGCAAAAAAATATAAGAGTAGAAAAAATATCAGAAGTTTAAGAAAAATTATGTGTTGGATAAAAAGCAAGGTCTGAGTGCCTTGCTTTT 92 TTerm_1165 NZ_LR027880.1 3864898 3864916 19 3864922 3864940 19 5 89 0 28 42 57 41 58 0 3864918 AAAGCCAGCCCAGTCTGCA TGCAGCCTGGACTGGCTTT True TCACACAAA CTTCACGTT True False - AAAGCCAGTCCAGGCTGCA GATGA TGCAGACTGGGCTGGCTTT TTTGTGTGA 88 RIL182_RS22210 intergenic 3864686 3864968 - down ATCACTATCCAAATATGAGAACGTGAAGAAAGCCAGTCCAGGCTGCAGATGATGCAGACTGGGCTGGCTTTTTGTGTGAGGTATGTGGATTTGGATATCAAATGGTGGTTTTCAGTTTTTTGAGTGGAAAATTGCACTAAGCCGAGGCTGTTTTGTGCCGTTGTATGAAAATAAGAAAATTTATTTCATACGAAGTTTCTGGTCGAAGTCTGTTCATATGTGTTGAAAGATGTTATGCTAAACATGATATATAGCTGCCGTGCTAAAATGGAGGGATTGAAA TAGAGGTATTACTTGAGTTAGTTTAATCACTATCCAAATATGAGAACGTGAAGAAAGCCAGTCCAGGCTGCAGATGATGCAGACTGGGCTGGCTTTTTGTGTGAGGTATGTGGATTTGGATATCAAATGGTGGTTTTCAGTTTTTTGAGTGGAAAATTGCACTAAGCCGAGGCTGTTTTGTGCCGTTGTATGAAAATAAGAAAATTTATTTCATACGAAGTTTCTGGTCGAAGTCTGTTCATATGTGTTGAAAGATGTTATGCTAAACATGATATATAGCTGCCGTGCTAAAATGGAGGGATTGAAAATGGCAAGACCGAAAAATAAACAGG ATCACTATCCAAATATGAGAACGTGAAGAAAGCCAGTCCAGGCTGCAGATGATGCAGACTGGGCTGGCTT 70 TTerm_1166 NZ_LR027880.1 3868464 3868477 14 3868485 3868498 14 7 78 0 13 64 35 63 36 0 3868480 CATAAAAAAGCAGC GCTGTTTGATTATG True TATGTAGAC ATAACAGTG True False - CATAATCAAACAGC CGGGATA GCTGCTTTTTTATG GTCTACATA 50 RIL182_RS18095 intergenic 3868268 3868616 - down ATTCAGTTCTTGTCTTATTTGTGCGAATGGGGTAATATGCGCATTTTTAATGAGCTAAAACCCGCCAAATTATGTGCGGCTGCAGTGGAACGCCTGGTAGGGTTGTTCACACTGTTATCATAATCAAACAGCCGGGATAGCTGCTTTTTTATGTCTACATACCGAGGACATAGAAGGGACATATCCAAATAAGAAGAAAGACGGATGGGACACACATTTCAGGCCGCTGACAACGGAGCTGTCTCAGATGATTTCTGAAATAAAGTCACAGCGTCAGGTGATTTGAAAAATGAAACAATATAACAGGTGCAAAATGCATCGGATGAATTAATGGAGGTTAAAAAGCAC CGAAACACAAACAGAGACAGGGCTGATTCAGTTCTTGTCTTATTTGTGCGAATGGGGTAATATGCGCATTTTTAATGAGCTAAAACCCGCCAAATTATGTGCGGCTGCAGTGGAACGCCTGGTAGGGTTGTTCACACTGTTATCATAATCAAACAGCCGGGATAGCTGCTTTTTTATGTCTACATACCGAGGACATAGAAGGGACATATCCAAATAAGAAGAAAGACGGATGGGACACACATTTCAGGCCGCTGACAACGGAGCTGTCTCAGATGATTTCTGAAATAAAGTCACAGCGTCAGGTGATTTGAAAAATGAAACAATATAACAGGTGCAAAATGCATCGGATGAATTAATGGAGGTTAAAAAGCACATGGCTCGTATTGCAGGTGTAGATT ATTCAGTTCTTGTCTTATTTGTGCGAATGGGGTAATATGCGCATTTTTAATGAGCTAAAACCCGCCAAATTATGTGCGGCTGCAGTGGAACGCCTGGTAGGGTTGTTCACACTGTTATCATAATCAAACAGCCGGGATAGCTGCTTTTTTAT 152 TTerm_1167 NZ_LR027880.1 3879161 3879176 16 3879181 3879196 16 4 100 0 32 68 31 68 31 0 3879178 AAGCCTTAAAATAAGC GCTTATTTTAAGGCTT True CTTCTTCCA TTCCGTCTC True True - AAGCCTTAAAATAAGC TGGC GCTTATTTTAAGGCTT TGGAAGAAG 80 RIL182_RS18205 intergenic 3878940 3879183 - down AGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATT GTAGAGACGGAAAAGCCTTAAAATAAGCTGGCGCTTATTTTAAGGCTTGGAAGAAGCAAGGACGGTTTCTTCCGGTTCACAACGGTGATCCGGGGAGAGATAAGAGACGGCTTCTTCCGGTCTTTGAAAAAAATAATAAAAAATTGGAAAACCGGGAGAAGTTTTACTTGCTTCTTCCGGTAATCTCTGATATAATAAACAAGATGTTCGGAGTCCGAGGAAACACACGGCAGTGTGTAAAGGGGACTGACAAAATAGGAGGTAAATTATGGCTCGTTCATTAAAAAAAGGAC AGCTGGCGCTTATTTTAAGGCT 22 TTerm_1168 NZ_LR027880.1 3891144 3891161 18 3891171 3891188 18 9 100 0 36 72 27 72 27 0 3891165 AAAAGGACTTTAGAAAAC GTTTTCTAAAGTCCTTTT True TACATATAA CCATATACC True True - AAAAGGACTTTAGAAAAC GGAGGAGAT GTTTTCTAAAGTCCTTTT TTATATGTA 88 RIL182_RS18270 intergenic 3890851 3891215 - down GTGAATGCTCATTGGACCGGTATATGGAAAAGGACTTTAGAAAACGGAGGAGATGTTTTCTAAAGTCCTTTTTATATGTAAACCTGCCGGAAAATCTGGCAGGATTGTTTTTTGACGGAACTGACAGAACCCCAACCACCGAGTCGAAACTCAACAGCTCCTTTTGATGTTATTAATGATACGGAATAATTGTGACCATTTCTTGACTGGAAAATGAAGGAAATCTTAAAAACAGATGAGAAATTCATAAAGTCGCATAGGCGGGAAGGGGGAAATGAGGTATAATGTGCGTAAAAGTGGTTAACACAGGGCAGGAAATTTTGTCAGTGAAATCTACTGTGGAATTTTATAATGGAGAAAATTT GATATGGATCCGTGCCTGCAATATAGTGAATGCTCATTGGACCGGTATATGGAAAAGGACTTTAGAAAACGGAGGAGATGTTTTCTAAAGTCCTTTTTATATGTAAACCTGCCGGAAAATCTGGCAGGATTGTTTTTTGACGGAACTGACAGAACCCCAACCACCGAGTCGAAACTCAACAGCTCCTTTTGATGTTATTAATGATACGGAATAATTGTGACCATTTCTTGACTGGAAAATGAAGGAAATCTTAAAAACAGATGAGAAATTCATAAAGTCGCATAGGCGGGAAGGGGGAAATGAGGTATAATGTGCGTAAAAGTGGTTAACACAGGGCAGGAAATTTTGTCAGTGAAATCTACTGTGGAATTTTATAATGGAGAAAATTTATGAAAGAGTATCTGGAAAATGTGC GTGAATGCTCATTGGACCGGTATATGGAAAAGGACTTTAGAAAACGGAGGAGATGTTTTCTAAAGTCCTTT 71 TTerm_1169 NZ_LR027880.1 3891983 3891994 12 3892003 3892014 12 8 100 0 24 75 25 75 25 0 3891998 AAAAGAGAAAGA TCTTTCTCTTTT True TAACCGAAA CCTGTTTTC True True - AAAAGAGAAAGA TGAACGGG TCTTTCTCTTTT TTTCGGTTA 64 RIL182_RS18275 intergenic 3891943 3892032 - down GTACCAGATGAAAACAGGAAAAGAGAAAGATGAACGGGTCTTTCTCTTTTTTCGGTTAAGAGAGAAATTTGAGACAGATAGGGGATTTC GATGTGTAGAAGAATTTGTAGGCTAGTACCAGATGAAAACAGGAAAAGAGAAAGATGAACGGGTCTTTCTCTTTTTTCGGTTAAGAGAGAAATTTGAGACAGATAGGGGATTTCATGGAAAGAAAAGGACTCAGTGGAA GTACCAGATGAAAACAGGAAAAGAGAAAGATGAACGGGTCTTTCTCTTT 49 TTerm_1170 NZ_LR027880.1 3905240 3905252 13 3905257 3905269 13 4 84 0 16 38 61 36 63 0 3905254 CCGCAACCCCTGA TCAAGGATTGCGG True AAAAAAAAC AATACAATC True False - CCGCAATCCTTGA GCAA TCAGGGGTTGCGG GTTTTTTTT 56 RIL182_RS18330 intergenic 3905101 3905646 - down AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAG TTGATAAAGTGGTAGGCAATGATTAAAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAGATGAACAATAAAACAACAAGAAACA AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCG 406 TTerm_1171 NZ_LR027880.1 3905406 3905415 10 3905422 3905431 10 6 80 0 10 65 35 62 37 0 3905418 AAAATCCGCA TGCTGTTTTT True TGGGTGGCA ACACAGTGT True True - AAAAACAGCA GTTTTA TGCGGATTTT TGCCACCCA 44 RIL182_RS18330 intergenic 3905101 3905646 - down AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAG TTGATAAAGTGGTAGGCAATGATTAAAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTTTGCCACCCAAAAGCATAGAAAATATGCAGAAATACGGTATTCAAATAACGTGAGGGTGGACGTACAGTAGGATCTGGACGTGTTGCTACAGTTATCGAGTAATTTATAATTTTAAATTATATATTGCAGATTGTATTCCGCAATCCTTGAGCAATCAGGGGTTGCGGTTTTTTTTATCTAAAACAGTTTTTGCTGATGCATTTATTCCAAAAGAATGGTAAACTATTATCTAATGAGCCTGCAGGAAATAAAGAGGTAATAGGCAGGACTTACAGTAATATGATTGATTTAGAAAGAGGCAGAAGATGAACAATAAAACAACAAGAAACA AAAAAATTCCCTTATTTCCCTTGTGATTATCTCATAAGGGTAAAAATAAGGGAAACTACATATCATTTCACTAATGGACAGGCGGGAAAGCCTATAAAATGGGGAAAGTTAGAGAGATAATTATATAAATTCCAGTTTATAGTAGTAAAGGAAGATGAAGTACCTACGGTGCCAAAACGGTGCCAAGAACTTAAGCAAATAAAAATACACTGTGTAAAAACAGCAGTTTTATGCGGATTT 240 TTerm_1172 NZ_LR027880.1 3908063 3908071 9 3908076 3908084 9 4 88 0 13 27 72 25 75 0 3908073 GGCGGCTTC GAAACCGCC True ATTAAAAAG AAAGGTTCT True False - GGCGGTTTC TTTG GAAGCCGCC CTTTTTAAT 50 RIL182_RS18340 intergenic 3908059 3908200 + down AAAGGCGGCTTCCAAAGAAACCGCCAAAGGTTCTATCAGACCGAAGCCATGATATACCTACACGCAAGAAGATTATACCATGTGCTTCTTCTGATACGCAACCAAGAACTTATGTTTGCAAAAGAAAGGGGAATGTAATAA CGTAACAAGAACTGCGGCAAATTAAAAAGGCGGCTTCCAAAGAAACCGCCAAAGGTTCTATCAGACCGAAGCCATGATATACCTACACGCAAGAAGATTATACCATGTGCTTCTTCTGATACGCAACCAAGAACTTATGTTTGCAAAAGAAAGGGGAATGTAATAATGGCAAAATCAACAAAAAGTTATGA TTATTACATTCCCCTTTCTTTTGCAAACATAAGTTCTTGGTTGCGTATCAGAAGAAGCACATGGTATAATCTTCTTGCGTGTAGGTATATCATGGCTTCGGTCTGATAGAACCTTTGGCGGTTTCTTTGGAAGCCGC 137 TTerm_1173 NZ_LR027880.1 3916433 3916450 18 3916460 3916477 18 9 100 0 36 66 33 66 33 0 3916454 ATAAAAGAAAGGACAGCA TGCTGTCCTTTCTTTTAT True GCAATTTTA CATAGCTGG True True - ATAAAAGAAAGGACAGCA ATTTGACAC TGCTGTCCTTTCTTTTAT TAAAATTGC 96 RIL182_RS18385 intergenic 3916320 3916570 - down AGCAAGAAGTGAGATAGTGTTGTAGGGAGTTTCCTGTAGTTAAAGATACCACACCCGATATGATGAACCCACGCTTCTACACTACCAGCTATGATAAAAGAAAGGACAGCAATTTGACACTGCTGTCCTTTCTTTTATAAAATTGCAGTACACAGAAAAAAGCTGTAAAATGAAAAATATATTTGTCCTTGTAACAATTCTCGGACATTTGCCTGTTATACTATCTGCAAAAAGAAAAGGAAGTGATAAT CAGAAGATTCATTAGAACTTTATTAAGCAAGAAGTGAGATAGTGTTGTAGGGAGTTTCCTGTAGTTAAAGATACCACACCCGATATGATGAACCCACGCTTCTACACTACCAGCTATGATAAAAGAAAGGACAGCAATTTGACACTGCTGTCCTTTCTTTTATAAAATTGCAGTACACAGAAAAAAGCTGTAAAATGAAAAATATATTTGTCCTTGTAACAATTCTCGGACATTTGCCTGTTATACTATCTGCAAAAAGAAAAGGAAGTGATAATATGAAGCATATTTTAATTGTCGAAG AGCAAGAAGTGAGATAGTGTTGTAGGGAGTTTCCTGTAGTTAAAGATACCACACCCGATATGATGAACCCACGCTTCTACACTACCAGCTATGATAAAAGAAAGGACAGCAATTTGACACTGCTGTCCTTTCTTTTA 137 TTerm_1174 NZ_LR027880.1 3918926 3918934 9 3918939 3918947 9 4 88 0 13 27 72 25 75 0 3918936 AGGGCAGTC GACCGCCCT True TTTTCAAAA ATCAATTAC True False - AGGGCGGTC TTCG GACTGCCCT TTTTGAAAA 66 RIL182_RS18405 intergenic 3918836 3918953 - down ATTGATAGGGCGGTCTTCGGACTGCCCTTTTGAAAATTGTATAGAAAAAGGAACAATGAAATGATATGATAAAAAAAGAGAATTAGATCAATCGGAATTTATAGGAGGTGAATTTTA TGTTGAGAGATATAGTTTATGTGTAATTGATAGGGCGGTCTTCGGACTGCCCTTTTGAAAATTGTATAGAAAAAGGAACAATGAAATGATATGATAAAAAAAGAGAATTAGATCAATCGGAATTTATAGGAGGTGAATTTTAATGAAATGTCCATATTGTGGTGATG ATTGATAGGGCGGTCTTCGGACTGCCC 27 TTerm_1175 NZ_LR027880.1 3920691 3920697 7 3920706 3920712 7 8 100 0 14 28 71 28 71 0 3920701 GGGCATG CATGCCC True AAAAAACAG CTCTTTCCT True False - GGGCATG GTGGTTGT CATGCCC CTGTTTTTT 60 RIL182_RS18415 intergenic 3920598 3920720 - down GGAAAGAGGGGCATGGTGGTTGTCATGCCCTGTTTTTTATGGTAGTCGGGATGAGGGAAAAGTGCTACAATTAAAAGGAAAAAATTGTAGAGAAAATTAAAAACATAGGAGGAAACGTATTT AACTGGAGAAGGCGTTGGAACGATAGGAAAGAGGGGCATGGTGGTTGTCATGCCCTGTTTTTTATGGTAGTCGGGATGAGGGAAAAGTGCTACAATTAAAAGGAAAAAATTGTAGAGAAAATTAAAAACATAGGAGGAAACGTATTTGTGAATGGTTTTACAGATGCATTGG GGAAAGAGGGGCATGGTGGTTGTCATGCC 29 TTerm_1176 NZ_LR027880.1 3926155 3926170 16 3926177 3926192 16 6 87 0 22 68 31 71 28 0 3926173 AAAAGCTCTGTTGAAT ATTCAACGGAGTTTTT True GGTAAGAAA CTTTTTGGC True True - AAAAACTCCGTTGAAT TTTGCT ATTCAACAGAGCTTTT TTTCTTACC 52 RIL182_RS18445 intergenic 3926151 3926302 + down GAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTTCTTTTTGGCACCGTTTTGGCACCGCTCACACCCATCTTCATTATTATCGCATGTAAAAAGGGTTCCGGAGAAATCTCCGAAACCCTTGAATTTACTGAATAATATTTAAT GGTAAAACAGATTAAGGGATGGTAAGAAAAAAGCTCTGTTGAATAGCAAAATTCAACGGAGTTTTTCTTTTTGGCACCGTTTTGGCACCGCTCACACCCATCTTCATTATTATCGCATGTAAAAAGGGTTCCGGAGAAATCTCCGAAACCCTTGAATTTACTGAATAATATTTAATTACTCGATAACTGTAGCAACACGTC ATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTT 147 TTerm_1177 NZ_LR027880.1 3926155 3926170 16 3926177 3926192 16 6 87 0 22 68 31 71 28 0 3926173 AAAAGCTCTGTTGAAT ATTCAACGGAGTTTTT True GGTAAGAAA CTTTTTGGC True True - AAAAACTCCGTTGAAT TTTGCT ATTCAACAGAGCTTTT TTTCTTACC 52 RIL182_RS18450 intergenic 3926151 3926302 - down ATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTTTTTC GACGTGTTGCTACAGTTATCGAGTAATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTTTTTCTTACCATCCCTTAATCTGTTTTACC ATTAAATATTATTCAGTAAATTCAAGGGTTTCGGAGATTTCTCCGGAACCCTTTTTACATGCGATAATAATGAAGATGGGTGTGAGCGGTGCCAAAACGGTGCCAAAAAGAAAAACTCCGTTGAATTTTGCTATTCAACAGAGCTTT 147 TTerm_1178 NZ_LR027880.1 3959910 3959921 12 3959929 3959940 12 7 83 0 14 66 33 70 30 0 3959924 AGCATACCAAAT ATCTGATATGCT True TAAAAAAAA CATCTTTTT True True - AGCATATCAGAT GTTAGAT ATTTGGTATGCT TTTTTTTTA 44 RIL182_RS18605 intergenic 3959889 3959924 + down GCTGCTCCATATTAAAAAAAAGCATACCAAATATC CGGAGAGTATTGGGAGCAGCTGTGAGCTGCTCCATATTAAAAAAAAGCATACCAAATATCTAACATCTGATATGCTCATCTTTTT GATATTTGGTATGC 14 TTerm_1179 NZ_LR027880.1 3959910 3959921 12 3959929 3959940 12 7 83 0 14 66 33 70 30 0 3959924 AGCATACCAAAT ATCTGATATGCT True TAAAAAAAA CATCTTTTT True True - AGCATATCAGAT GTTAGAT ATTTGGTATGCT TTTTTTTTA 44 RIL182_RS22360 intergenic 3959889 3959924 - down GATATTTGGTATGCTTTTTTTTAATATGGAGCAGC AAAAAGATGAGCATATCAGATGTTAGATATTTGGTATGCTTTTTTTTAATATGGAGCAGCTCACAGCTGCTCCCAATACTCTCCG GATATTTGGTATGC 14 TTerm_1180 NZ_LR027880.1 3982849 3982869 21 3982877 3982897 21 7 71 0 12 83 16 86 13 0 3982872 TTTAAAATCTGTTTCATAAAA TTTTTGGATACATTTTTTCAA True TTCCTCTTT GCCGTTCCC True True - TTGAAAAAATGTATCCAAAAA ACTAGAA TTTTATGAAACAGATTTTAAA AAAGAGGAA 32 RIL182_RS18720 intergenic 3982836 3982872 - down GAATTTTATGAAACAGATTTTAAAAAGAGGAAAAGA TTGAAAAAATGTATCCAAAAAACTAGAATTTTATGAAACAGATTTTAAAAAGAGGAAAAGAATGGAAATTTCAGAACAGTTGGCCA GAATTTTATGAAACAGATTTTAA 23 TTerm_1181 NZ_LR027880.1 3984774 3984788 15 3984797 3984811 15 8 86 0 20 66 33 69 30 0 3984792 AAACTGTCACATTAG CTAACATGACAGTTT True TAAGCAAAA CAAATTTCT True False - AAACTGTCATGTTAG CGCATATA CTAATGTGACAGTTT TTTTGCTTA 56 RIL182_RS18730 intergenic 3984732 3984819 - down GAAATTTGAAACTGTCATGTTAGCGCATATACTAATGTGACAGTTTTTTGCTTATAAAAAGCTTTGGAACAGGACGGAGGAGCAAAT AGATTGCTGCGAAAGTAGTAAAATAGAAATTTGAAACTGTCATGTTAGCGCATATACTAATGTGACAGTTTTTTGCTTATAAAAAGCTTTGGAACAGGACGGAGGAGCAAATATGAATCAGAAAAGCCTGGCAATTA GAAATTTGAAACTGTCATGTTAGCGCATATACTAATGTGACAGTT 45 TTerm_1182 NZ_LR027880.1 4005620 4005625 6 4005631 4005636 6 5 100 0 12 66 33 66 33 0 4005627 AAAAGC GCTTTT True TATAGAAAA ACTGTCGGC True False - AAAAGC TGTCG GCTTTT TTTTCTATA 40 RIL182_RS18825 intergenic 4005571 4005682 - down ATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAG AGGGTGTACTTTCTCTGTTACAGTAATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAGATGAACAAAGAAGAATTACTAGCAG ATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTT 62 TTerm_1183 NZ_LR027880.1 4005605 4005631 27 4005638 4005664 27 6 81 0 29 72 27 72 27 0 4005634 TATATTATATAGAAAAAAAGCCGACAG CTGTCGGCTTTTTAATTATGTAGTATA True AATACTTCT CGCTACACT True True - TATACTACATAATTAAAAAGCCGACAG TAAAAG CTGTCGGCTTTTTTTCTATATAATATA AGAAGTATT 90 RIL182_RS18825 intergenic 4005571 4005682 - down ATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAG AGGGTGTACTTTCTCTGTTACAGTAATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATATAGAAGTATTGTGAAAAAATAATTTGGGGAAAAAGATGAACAAAGAAGAATTACTAGCAG ATCTGACAGAGTGTAGCGTATACTACATAATTAAAAAGCCGACAGTAAAAGCTGTCGGCTTTTTTTCTATATAATAT 77 TTerm_1184 NZ_LR027880.1 4006682 4006690 9 4006695 4006703 9 4 100 0 18 88 11 88 11 0 4006692 AAAAAGAAA TTTCTTTTT True TTATAGTAA CTATCTCTA True False - AAAAAGAAA AAAA TTTCTTTTT TTACTATAA 44 RIL182_RS18830 intergenic 4006500 4006721 - down GGAAAAAAATAGAGATAGAAAAAGAAAAAAATTTCTTTTTTACTATAAAGTATCGGGATGAACATCCGATATATAATACAAGTAAACAAAGTGATGATGAACATTACTTGAAAAAGTTACTTGGCAGTGGAACAGAATGGAGCGTACGGCCGGGAAGGAAAGCTGCAAAATTAAGACGATGCGGCATGGAAGCCGCAGTAAATTCAAGGAGGAAATGAATT CGGTGTTTACGGACAAGAAAAAATAGGAAAAAAATAGAGATAGAAAAAGAAAAAAATTTCTTTTTTACTATAAAGTATCGGGATGAACATCCGATATATAATACAAGTAAACAAAGTGATGATGAACATTACTTGAAAAAGTTACTTGGCAGTGGAACAGAATGGAGCGTACGGCCGGGAAGGAAAGCTGCAAAATTAAGACGATGCGGCATGGAAGCCGCAGTAAATTCAAGGAGGAAATGAATTATGGTAGTACAGCACAATATGACCG GGAAAAAAATAGAGATAGAAAAAGAAAAAAATTTCTTTT 39 TTerm_1185 NZ_LR027880.1 4026344 4026358 15 4026367 4026381 15 8 80 0 15 63 36 66 33 0 4026362 CAAGTTCGGTTTTGT ACAAACCCAAAATTG True GAACAAAAC AAAACCACC True False - CAATTTTGGGTTTGT CAAATTGC ACAAAACCGAACTTG GTTTTGTTC 46 RIL182_RS18925 intergenic 4025992 4026497 - down AGATCGGGCGTATAATAAAGGTGAACGAGCAATTTTGAAACCGGCAGTTATGAAAATTAGTAGGATGAATTTCGTATTTGTCGCATATTATGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTTTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGTGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTTCTAATTTTCTCCCAAAGTCACAAAAACAGTCTCGGCTTTGTGCAATTTGACAATCGCTAAGTTATGAACCACCTTTTGACACCCTAATCATATTATCTCAACTGTAAAAATTGGCATATTGAATTGCAGATTTGCCGTATGATGAATCCTGGGTATAAAAGACCTATGGGGATGGAGGGGAGGAGCGTT TCAGAAGACGGATTGAAAGACGGTAAGATCGGGCGTATAATAAAGGTGAACGAGCAATTTTGAAACCGGCAGTTATGAAAATTAGTAGGATGAATTTCGTATTTGTCGCATATTATGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTTTGTCAAATTGCACAAAACCGAACTTGTTTTGTTCCGTTGTCCGAAAATAAGAAAAACTAAGTATGCCTGAATCAGTTTTTCACAGAGTGACGTAAACGGCATTCAACGAGCCTTCCATGGCTCGTGAAGCCTTGTTCTGCCGTCCGTGGCAGAACATTACTGTAAATAGACAGGCATACTAAGATTTTCTAATTTTCTCCCAAAGTCACAAAAACAGTCTCGGCTTTGTGCAATTTGACAATCGCTAAGTTATGAACCACCTTTTGACACCCTAATCATATTATCTCAACTGTAAAAATTGGCATATTGAATTGCAGATTTGCCGTATGATGAATCCTGGGTATAAAAGACCTATGGGGATGGAGGGGAGGAGCGTTATGATCGGTGGCGTGGATGGATACA AGATCGGGCGTATAATAAAGGTGAACGAGCAATTTTGAAACCGGCAGTTATGAAAATTAGTAGGATGAATTTCGTATTTGTCGCATATTATGATTCGGGTGTCAAAAGGTGGTTTTCAATTTTGGGTTTGTCAAATTGCACAAAACCGAACTT 153 TTerm_1186 NZ_LR027880.1 4030241 4030257 17 4030264 4030280 17 6 100 0 34 70 29 70 29 0 4030260 AAGAAAAAACTGGATGT ACATCCAGTTTTTTCTT True TGAAGTATA TTTCAGTCA True True - AAGAAAAAACTGGATGT TTTCAT ACATCCAGTTTTTTCTT TATACTTCA 92 RIL182_RS18940 intergenic 4030136 4030369 - down GAAGATTTATTGGTGCTGATATGGTATCATGGATTGAAATAAAAAATGAATGCTCAGATCATGTTAATTACAAACTGGCATGACTGAAAAAGAAAAAACTGGATGTTTTCATACATCCAGTTTTTTCTTATACTTCATAACATCAGGATCCGGAAAGAAATTGATACAGAGTAACTGTTTGAAAAACTGCGCAGAAAATCAAACTGGTTGTCTGAAAAAGGAGAAAGTTAGTT AGATGCGCTGGGCAGTCCGGGCATAGAAGATTTATTGGTGCTGATATGGTATCATGGATTGAAATAAAAAATGAATGCTCAGATCATGTTAATTACAAACTGGCATGACTGAAAAAGAAAAAACTGGATGTTTTCATACATCCAGTTTTTTCTTATACTTCATAACATCAGGATCCGGAAAGAAATTGATACAGAGTAACTGTTTGAAAAACTGCGCAGAAAATCAAACTGGTTGTCTGAAAAAGGAGAAAGTTAGTTATGAGTAATATAAATAATACAAAAG GAAGATTTATTGGTGCTGATATGGTATCATGGATTGAAATAAAAAATGAATGCTCAGATCATGTTAATTACAAACTGGCATGACTGAAAAAGAAAAAACTGGATGTTTTCATACATCCAGTTTTTTCT 128 TTerm_1187 NZ_LR027880.1 4036888 4036899 12 4036908 4036919 12 8 100 0 24 58 41 58 41 0 4036903 AAAAAATCCGGG CCCGGATTTTTT True ATGAATACA TATGGTCTG True True - AAAAAATCCGGG TGTTGCTG CCCGGATTTTTT TGTATTCAT 88 RIL182_RS18965 intergenic 4036653 4036934 - down AGTATCCAGACCATAAAAAAATCCGGGTGTTGCTGCCCGGATTTTTTGTATTCATGTACGATGTCAGCTCTGCTTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCCAGGGCGCGAAAGAGTCGCAAGCGACTCTTTGTTCCATATCAACTGATAGTTGATGCGTAAAAAGAAATAACAACCGGCACATGCTTGAAAAATCAACCATTAGTTTTATA CGATGAAGGGTGCCTATATGGACTAAGTATCCAGACCATAAAAAAATCCGGGTGTTGCTGCCCGGATTTTTTGTATTCATGTACGATGTCAGCTCTGCTTTTTTAATTCATAGGAAATTACGTCCTATGAATTAAAAAGCCCTCCGGGCGGGATGCGCATCTCGCGGAGTAGAAGTTAGCTGTAAACAGCACCGCCAGGGCGCGAAAGAGTCGCAAGCGACTCTTTGTTCCATATCAACTGATAGTTGATGCGTAAAAAGAAATAACAACCGGCACATGCTTGAAAAATCAACCATTAGTTTTATAATGAAATTAGAAAAACGAGATGGGG AGTATCCAGACCATAAAAAAATCCGGGTGTTGCTGCCCGGATTTTT 46 TTerm_1188 NZ_LR027880.1 4040379 4040395 17 4040402 4040418 17 6 94 0 29 73 26 75 25 0 4040398 AAAAAACAAGGTGTTTT AAAGCACCTTGTTTTTT True TTTAGACAA GTATATTTT True True - AAAAAACAAGGTGCTTT TTTAGG AAAACACCTTGTTTTTT TTGTCTAAA 74 RIL182_RS18980 intergenic 4040257 4040483 - down AGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATC CAAAGGCGCAGCAAAAAAATGAGTAAGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTTTTGTCTAAAAGAGAGGTTTTAACAAACTAGACATCAGATGTATTGACAAAAAATGATCAATAAAATACAATAATCGCAATGAAACATCAGACGTCATACAAATATCAATAAGGAGGTATATCATGGGTAACGTCGCAGAATTAGATA AGGGACAAAAACTCCAAAAACTGGTAAGACGTCATATGACATGATGCAATATCGGAAAAATATACAAAAAACAAGGTGCTTTTTTAGGAAAACACCTTGTTTTT 104 TTerm_1189 NZ_LR027880.1 4050455 4050462 8 4050468 4050475 8 5 87 0 11 75 25 85 14 0 4050464 AAAGGAAA TTTGCTTT True CTCTTCCAA ATATTCGTG True False - AAAGCAAA TTGTG TTTCCTTT TTGGAAGAG 38 RIL182_RS19010 intergenic 4050446 4050632 + down CTCTTCCAAAAGGAAACACAATTTGCTTTATATTCGTGTTTCCTTTTTCTTTTGACACTTTTTCGTTATTTCTCATAATTTTGCTTCTAAAGTACTATATTTTTTCGTAATTTATGTCTACCATTTTTTGTCAAAAAATAGTAAAATAAGTGTAATTAACCTATAGGAAAGGGAGCTTGATATCCA GAGGGTTCGAATCCCTCCGTCTCCGCTCTTCCAAAAGGAAACACAATTTGCTTTATATTCGTGTTTCCTTTTTCTTTTGACACTTTTTCGTTATTTCTCATAATTTTGCTTCTAAAGTACTATATTTTTTCGTAATTTATGTCTACCATTTTTTGTCAAAAAATAGTAAAATAAGTGTAATTAACCTATAGGAAAGGGAGCTTGATATCCATGAAAAGCAAAAGCGTAAAAAATTC TGGATATCAAGCTCCCTTTCCTATAGGTTAATTACACTTATTTTACTATTTTTTGACAAAAAATGGTAGACATAAATTACGAAAAAATATAGTACTTTAGAAGCAAAATTATGAGAAATAACGAAAAAGTGTCAAAAGAAAAAGGAAACACGAATATAAAGCAAATTGTGTTTCCTT 177 TTerm_1190 NZ_LR027880.1 4063668 4063682 15 4063688 4063702 15 5 93 0 25 60 40 57 42 0 4063684 TGCTATGCATGCTAT ATAGCTTGCATAGCA True AAAATGCCT TGTGCCTCT True False - TGCTATGCAAGCTAT TGAGC ATAGCATGCATAGCA AGGCATTTT 66 RIL182_RS19075 intergenic 4063574 4063882 - down AAGAAATTTAGACAGTAGAAATCCTGTTTTACAGGAAAATGAATATAGCCGCACTAAAGTGCAAAACTTTGGTGCGGCAATTTCATCATATTGTTGACGCTATAGGAAATGAGGCAGGAATTTCCTATGTCGTGAACGGAAAAACAAGGAGGAAAATCCTCTGCTCCTGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGGCATTTTCCTTCGGAAAACTAAAGGAGGAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACTAAAGGAGGATTAGAAC ACAAAGATGCTGTAAAGACTGAATAAAGAAATTTAGACAGTAGAAATCCTGTTTTACAGGAAAATGAATATAGCCGCACTAAAGTGCAAAACTTTGGTGCGGCAATTTCATCATATTGTTGACGCTATAGGAAATGAGGCAGGAATTTCCTATGTCGTGAACGGAAAAACAAGGAGGAAAATCCTCTGCTCCTGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGCAGGCATTTTCCTTCGGAAAACTAAAGGAGGAAAATCCTCTGCTCCTGCAAAGGCAGTCGCATTTTGCTCCGCAAAACTAAAGGAGGATTAGAACGTGAAAAAATATGCACTTAAGAGAA AAGAAATTTAGACAGTAGAAATCCTGTTTTACAGGAAAATGAATATAGCCGCACTAAAGTGCAAAACTTTGGTGCGGCAATTTCATCATATTGTTGACGCTATAGGAAATGAGGCAGGAATTTCCTATGTCGTGAACGGAAAAACAAGGAGGAAAATCCTCTGCTCCTGCAAGAGGCACATGCTATGCAAGCTATTGAGCATAGCATGCATAGC 214 TTerm_1191 NZ_LR027880.1 4085167 4085176 10 4085186 4085195 10 9 100 0 20 50 50 50 50 0 4085180 AAAGTCCCAC GTGGGACTTT True TTTATGAAA CCTTCTGAA True False - AAAGTCCCAC AGATACAAC GTGGGACTTT TTTCATAAA 72 RIL182_RS19165 intergenic 4085147 4085210 - down ATCAGGTTCAGAAGGAAAGTCCCACAGATACAACGTGGGACTTTTTCATAAAAGGAGAAACTT TAGATGCTTTTCTTGCAGCAAAATAATCAGGTTCAGAAGGAAAGTCCCACAGATACAACGTGGGACTTTTTCATAAAAGGAGAAACTTATGAAGAAGAAAAAGAACAAAGTTA ATCAGGTTCAGAAGGAAAGTCCCACAGATACAACGTGGGACTT 43 TTerm_1192 NZ_LR027880.1 4096991 4097007 17 4097012 4097028 17 4 88 0 24 70 29 73 26 0 4097009 AAAGAACAGGGTACATA TATATACACTGTTCTTT True TTACAAAAA GTATAATCC True False - AAAGAACAGTGTATATA GAAA TATGTACCCTGTTCTTT TTTTTGTAA 48 RIL182_RS19230 intergenic 4096861 4097174 - down AAAGAGGCTTTATACGTGAATGTAAAGAGGCGGTGCAGATATGAAGGTTGAAGCAGCGAAAGAAGTGCCAATGGTAAGGACAGATAAAGCCAGATAGTAATTGGGGCGTGGGAGTAATCCCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACG TTGAAAAGGACGAACAAAGCATGTGAAAGAGGCTTTATACGTGAATGTAAAGAGGCGGTGCAGATATGAAGGTTGAAGCAGCGAAAGAAGTGCCAATGGTAAGGACAGATAAAGCCAGATAGTAATTGGGGCGTGGGAGTAATCCCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACGATGAATTATTCTACAGAGGTAAAAC AAAGAGGCTTTATACGTGAATGTAAAGAGGCGGTGCAGATATGAAGGTTGAAGCAGCGAAAGAAGTGCCAATGGTAAGGACAGATAAAGCCAGATAGTAATTGGGGCGTGGGAGTAATCCCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTT 183 TTerm_1193 NZ_LR027880.1 4098210 4098223 14 4098231 4098244 14 7 100 0 28 64 35 64 35 0 4098226 AAAATCCATGTTCC GGAACATGGATTTT True TTATAATAA GTGGTAATG True True - AAAATCCATGTTCC AATTTAA GGAACATGGATTTT TTATTATAA 80 RIL182_RS19235 intergenic 4097989 4098268 - down AATTATTAATTACCCCATTACCACAAAATCCATGTTCCAATTTAAGGAACATGGATTTTTATTATAATATATTTAAATATTATTGTTTAAAGTTCGTAAACGCTCCATACGTTTACATTCCGTCTTTATCGTTTCCTCAATCGGAATTTGTGAGGATAAAATGCAACTTAGAAAATACACAACTTATGACTGTGGGTATTTGGCTGAATTGTTTATTTTCATAAAATGTGTTACAATCAAGTTAGCCGAAACTAATTATATTGCAAAAAAGGTAAATGT CATATGATGTGGCATGTGAAATATAAATTATTAATTACCCCATTACCACAAAATCCATGTTCCAATTTAAGGAACATGGATTTTTATTATAATATATTTAAATATTATTGTTTAAAGTTCGTAAACGCTCCATACGTTTACATTCCGTCTTTATCGTTTCCTCAATCGGAATTTGTGAGGATAAAATGCAACTTAGAAAATACACAACTTATGACTGTGGGTATTTGGCTGAATTGTTTATTTTCATAAAATGTGTTACAATCAAGTTAGCCGAAACTAATTATATTGCAAAAAAGGTAAATGTATGAGTGAAAGAATAAAACCTACTA AATTATTAATTACCCCATTACCACAAAATCCATGTTCCAATTTAAGGAACATGGATTT 58 TTerm_1194 NZ_LR027880.1 4103872 4103877 6 4103883 4103888 6 5 100 0 12 100 0 100 0 0 4103879 AAAATA TATTTT True GGGTCAAAA CAATTATTT True False - AAAATA AATCA TATTTT TTTTGACCC 24 RIL182_RS19260 intergenic 4103755 4104044 - down AATCTATTAGCCCAAAATGAAAAAAATAAGAAATTGGCTAATAGAACAAAGCGAACCAAATAAAGGATAACGTATAAGGCATTGGTCATAATCGGCTGATGCCTTTTTTGTGCACAATTTTAAACAGATATAAAGTGGTTTATAAGGAAATAATTGAAAATAAATCATATTTTTTTGACCCTTTTTTGCAATCAGCTATTTTTTACTCCAAATAAATGATAGAAGCCAGTAAATAAAGGATGGCAACAGAAAGGAGAAGCTGATATGCAGGAACAGAAGAACTGTACCG TTGCGGATTGGTTGTTGGACAAATAAATCTATTAGCCCAAAATGAAAAAAATAAGAAATTGGCTAATAGAACAAAGCGAACCAAATAAAGGATAACGTATAAGGCATTGGTCATAATCGGCTGATGCCTTTTTTGTGCACAATTTTAAACAGATATAAAGTGGTTTATAAGGAAATAATTGAAAATAAATCATATTTTTTTGACCCTTTTTTGCAATCAGCTATTTTTTACTCCAAATAAATGATAGAAGCCAGTAAATAAAGGATGGCAACAGAAAGGAGAAGCTGATATGCAGGAACAGAAGAACTGTACCGGGAAGATTCGAATTTGTATTCACTC AATCTATTAGCCCAAAATGAAAAAAATAAGAAATTGGCTAATAGAACAAAGCGAACCAAATAAAGGATAACGTATAAGGCATTGGTCATAATCGGCTGATGCCTTTTTTGTGCACAATTTTAAACAGATATAAAGTGGTTTATAAGGAAATAATTGAAAATAAATCATATTT 172 TTerm_1195 NZ_LR027880.1 4111315 4111337 23 4111345 4111367 23 7 86 0 31 63 36 65 35 0 4111340 AAAAAATAACTCCCCATCCCTCA TGAGAGATGGAGAGTTACTTTTT True TATATTTGA ACGCTGCAA True True - AAAAAGTAACTCTCCATCTCTCA GATATTG TGAGGGATGGGGAGTTATTTTTT TCAAATATA 86 RIL182_RS19300 intergenic 4111267 4111366 - down AAAAGTAACTCTCCATCTCTCAGATATTGTGAGGGATGGGGAGTTATTTTTTCAAATATAGTTCAACGGCATCTTAATTATTGATACTCTTTTCTCTGC GGGAAATCCCGGAGATTGCAGCGTAAAAAGTAACTCTCCATCTCTCAGATATTGTGAGGGATGGGGAGTTATTTTTTCAAATATAGTTCAACGGCATCTTAATTATTGATACTCTTTTCTCTGCCTGCCAAGTATCCTAACACCGTCAA AAAAGTAACTCTCCATCTCTCAGATATTGTGAGGGATGGGGAGTTATTTTT 51 TTerm_1196 NZ_LR027880.1 4133643 4133661 19 4133670 4133688 19 8 89 0 28 52 47 52 47 0 4133665 CTTTCCGAAAATCGGCAAA TTTGCCGCCTTTCGGAAAG True TTCGATTTC GGACTTCCG True False - CTTTCCGAAAGGCGGCAAA AAAAGCGC TTTGCCGATTTTCGGAAAG GAAATCGAA 80 RIL182_RS22365 intergenic 4133356 4133812 - down ACAACTACTGTTTATACTAAAAAAGAAAATCTGTGAAATAACAGATAGCTAACCATTTAAGGATGGCGGTAGCGGAGCTTCCGCTGCCGCCTTTTCCTTACGAAAAGGATTTCTTCGGAAGTCCCTTTCCGAAAGGCGGCAAAAAAAGCGCTTTGCCGATTTTCGGAAAGAAATCGAACAAGGAGAAATCAAATGGACGAACAAGAAAAAGAAATTGAAGAAATACTCAGAACATTTGACAAAGCACCTTCGCCTTCGTCAGAGAATAGTGTTCAAAATCAAGCATAGCAAAACAATAAGCAGCCTCGGCAAATTTCCCAAAAACCAACTGACACCGAACGGATTGCCCGCACATCAAATCAAACAGAATACAAAAGACAAGCTCAGTCAAGCAAAGGCAGGTATCTCTCCCCTACACGCAAAACCGCAATAAAGCGAAGAAAAAGGCAAAGAGCT GTTCGTCAGCGGCTTCGGAGTTGTGACAACTACTGTTTATACTAAAAAAGAAAATCTGTGAAATAACAGATAGCTAACCATTTAAGGATGGCGGTAGCGGAGCTTCCGCTGCCGCCTTTTCCTTACGAAAAGGATTTCTTCGGAAGTCCCTTTCCGAAAGGCGGCAAAAAAAGCGCTTTGCCGATTTTCGGAAAGAAATCGAACAAGGAGAAATCAAATGGACGAACAAGAAAAAGAAATTGAAGAAATACTCAGAACATTTGACAAAGCACCTTCGCCTTCGTCAGAGAATAGTGTTCAAAATCAAGCATAGCAAAACAATAAGCAGCCTCGGCAAATTTCCCAAAAACCAACTGACACCGAACGGATTGCCCGCACATCAAATCAAACAGAATACAAAAGACAAGCTCAGTCAAGCAAAGGCAGGTATCTCTCCCCTACACGCAAAACCGCAATAAAGCGAAGAAAAAGGCAAAGAGCTGTGATTGTTTCGTTATTAGCACTCC ACAACTACTGTTTATACTAAAAAAGAAAATCTGTGAAATAACAGATAGCTAACCATTTAAGGATGGCGGTAGCGGAGCTTCCGCTGCCGCCTTTTCCTTACGAAAAGGATTTCTTCGGAAGTCCCTTTCCGAAAGGCGGCAAAAAAAGCGCTTTGCCGATTTTCGGAAA 169 TTerm_1197 NZ_LR027880.1 4154076 4154093 18 4154098 4154115 18 4 100 0 36 66 33 66 33 0 4154095 AAATAAAAATACCGCGCA TGCGCGGTATTTTTATTT True CTCACCTCA CTGTATTTT True True - AAATAAAAATACCGCGCA GATT TGCGCGGTATTTTTATTT TGAGGTGAG 112 RIL182_RS19525 intergenic 4154011 4154188 + down TTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTTCTGTATTTTGTTTTTGTATATTACTTCTGATAACAGGCTAATAGGCTGTTTGCAAAGTGTACCTTCTAGTGTT GTTGAGTGCTACGATTCCGAGCTGATTGCCTGAAGTAACGACTCTACAATTTTCTATGAAGATCCATGTGACAAAAGGCAGCTCACCTCAAATAAAAATACCGCGCAAATCTGCGCGGTATTTTTATTTCTGTATTTTGTTTTTGTATATTACTTCTGATAACAGGCTAATAGGCTGTTTGCAAAGTGTACCTTCTAGTGTTTATTTATCACTTCCGCCAAAGAAGT AACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATT 112 TTerm_1198 NZ_LR027880.1 4154076 4154093 18 4154098 4154115 18 4 100 0 36 66 33 66 33 0 4154095 AAATAAAAATACCGCGCA TGCGCGGTATTTTTATTT True CTCACCTCA CTGTATTTT True True - AAATAAAAATACCGCGCA GATT TGCGCGGTATTTTTATTT TGAGGTGAG 112 RIL182_RS19530 intergenic 4154011 4154188 - down AACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATTTGAGGTGAGCTGCCTTTTGTCACATGGATCTTCATAGAAAATTGTAGAGTCGTTACTTCAGGCAA ACTTCTTTGGCGGAAGTGATAAATAAACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATTTGAGGTGAGCTGCCTTTTGTCACATGGATCTTCATAGAAAATTGTAGAGTCGTTACTTCAGGCAATCAGCTCGGAATCGTAGCACTCAAC AACACTAGAAGGTACACTTTGCAAACAGCCTATTAGCCTGTTATCAGAAGTAATATACAAAAACAAAATACAGAAATAAAAATACCGCGCAGATTTGCGCGGTATTTTTATT 112 TTerm_1199 NZ_LR027880.1 4165667 4165678 12 4165683 4165694 12 4 91 0 19 54 45 54 45 0 4165680 ACAGGTATTCCG CGAAATACCTGT True ACGCGAAAA CTAAAATCA True False - ACAGGTATTTCG GAAA CGGAATACCTGT TTTTCGCGT 54 RIL182_RS19590 intergenic 4165396 4165717 - down AAAACGGCATAATATGATTTTAGACAGGTATTTCGGAAACGGAATACCTGTTTTCGCGTTTTCCTATGTTAAGGAAGAAGCTGTTAAATTATTCAAAAGGGATTGACAGATCACAAAGAACAAAGTATTATTTAAAGGAACTTCATACTGCAATGCTTTAAAGTGAAAAAGAAAAACGCATTATGAACACAATAGATTCAATGTTTTACAGGCAAATCTATTGATATAAATAAAAAAGTCAGCGCAAAGAGTACAAAATGTCTTTTAACAGGATGATATCGATAACTGATATAGAAAAACGGCGCAGAAACGGAGGACAAA TAATTGGAAACCATGTATTTTATTAAAAACGGCATAATATGATTTTAGACAGGTATTTCGGAAACGGAATACCTGTTTTCGCGTTTTCCTATGTTAAGGAAGAAGCTGTTAAATTATTCAAAAGGGATTGACAGATCACAAAGAACAAAGTATTATTTAAAGGAACTTCATACTGCAATGCTTTAAAGTGAAAAAGAAAAACGCATTATGAACACAATAGATTCAATGTTTTACAGGCAAATCTATTGATATAAATAAAAAAGTCAGCGCAAAGAGTACAAAATGTCTTTTAACAGGATGATATCGATAACTGATATAGAAAAACGGCGCAGAAACGGAGGACAAAATGGAAATGGAAATGGAGTTCTTAC AAAACGGCATAATATGATTTTAGACAGGTATTTCGGAAACGGAATACCTG 50 TTerm_1200 NZ_LR027880.1 4184203 4184226 24 4184233 4184256 24 6 95 0 43 64 35 65 34 0 4184229 ATCAGAAAAGGATCGTGAAAATGA TCATCTTCACGATCCTTTTCTGAT True ATGATTACA ATCAAACTG True True - ATCAGAAAAGGATCGTGAAGATGA GCAAAA TCATTTTCACGATCCTTTTCTGAT TGTAATCAT 102 RIL182_RS19695 intergenic 4184164 4184297 + down TAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGATATCAAACTGATCTATCGTTCATAAAATCATCGTCCGTCAGT TTTTCTTGCAAAAGACCTTGCATAGTAAGTTTGGAATACCATCTTACAGGTAAAAATGATTACATCAGAAAAGGATCGTGAAAATGATTTTGCTCATCTTCACGATCCTTTTCTGATATCAAACTGATCTATCGTTCATAAAATCATCGTCCGTCAGTTATAATGCGGCAAGCATCTGCAGCG ACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGA 94 TTerm_1201 NZ_LR027880.1 4184203 4184226 24 4184233 4184256 24 6 95 0 43 64 35 65 34 0 4184229 ATCAGAAAAGGATCGTGAAAATGA TCATCTTCACGATCCTTTTCTGAT True ATGATTACA ATCAAACTG True True - ATCAGAAAAGGATCGTGAAGATGA GCAAAA TCATTTTCACGATCCTTTTCTGAT TGTAATCAT 102 RIL182_RS19700 intergenic 4184164 4184297 - down ACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGATGTAATCATTTTTACCTGTAAGATGGTATTCCAAACTTA CGCTGCAGATGCTTGCCGCATTATAACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGATGTAATCATTTTTACCTGTAAGATGGTATTCCAAACTTACTATGCAAGGTCTTTTGCAAGAAAA ACTGACGGACGATGATTTTATGAACGATAGATCAGTTTGATATCAGAAAAGGATCGTGAAGATGAGCAAAATCATTTTCACGATCCTTTTCTGA 94 TTerm_1202 NZ_LR027880.1 4187835 4187847 13 4187853 4187865 13 5 76 0 11 76 23 80 20 0 4187849 GTAAAATAAGAGT ACTTTGAATTTAC True GCTCTGCCG ATATCATTA True False - GTAAATTCAAAGT TATTT ACTCTTATTTTAC CGGCAGAGC 38 RIL182_RS19715 intergenic 4187675 4187927 + down TAACGGTCTGTACATTTTGCAGACAGATCCGGTATCATAACAGTTGACAGGGATGGAGTACCTCAATGCCCACCCGGTCAGAATAAGAAAAAATATCTAAGACGATATACAAATCCGACAAAAAGAAACGGCAGAGTTTTACCGAACATAAGCTCTGCCGTAAAATAAGAGTAAATAACTTTGAATTTACATATCATTATGCTACAATAGGAACACAAACGATAATTCTTAAGAAGAAGAGGGTTCTTAACA TAAGATCAAAAAAACGAACCTTTGATAACGGTCTGTACATTTTGCAGACAGATCCGGTATCATAACAGTTGACAGGGATGGAGTACCTCAATGCCCACCCGGTCAGAATAAGAAAAAATATCTAAGACGATATACAAATCCGACAAAAAGAAACGGCAGAGTTTTACCGAACATAAGCTCTGCCGTAAAATAAGAGTAAATAACTTTGAATTTACATATCATTATGCTACAATAGGAACACAAACGATAATTCTTAAGAAGAAGAGGGTTCTTAACATGAAGAAAAAATTTGTCCCTATTTT TGTTAAGAACCCTCTTCTTCTTAAGAATTATCGTTTGTGTTCCTATTGTAGCATAATGATATGTAAATTCAAAGTTATTTACTCTTATTTTA 92 TTerm_1203 NZ_LR027880.1 4193956 4193971 16 4193978 4193994 17 6 82 5 12 57 42 57 42 0 4193974 ATGGCGCATACTTTCA TGAAATATCTGCGCCAT True ACAAAAGAA CCATAGCTG True False - ATGGCGCAGATATTTCA GGGAAG TGAAAGTATGCGCCAT TTCTTTTGT 32 RIL182_RS19735 intergenic 4193838 4194085 - down AAAACTGTATAAAATAGCAGAACAGCGTTTGGAATCGTATCGAAAAACTTAATAAATGTGCTGATGTATCCGATATATACATCAGCTATGGATGGCGCAGATATTTCAGGGAAGTGAAAGTATGCGCCATTCTTTTGTCCTGATATAACCGGATTGGTCAGATATAACTGAGTGAAAAGCAGAAATCAGGCAAGGAAAAACTGTACGGAAAGTATGTAAGAACAGAAATGACAAGGAGAGTCGGATC TTGGTGTGGCAGTATTCCGCTATTAAAAACTGTATAAAATAGCAGAACAGCGTTTGGAATCGTATCGAAAAACTTAATAAATGTGCTGATGTATCCGATATATACATCAGCTATGGATGGCGCAGATATTTCAGGGAAGTGAAAGTATGCGCCATTCTTTTGTCCTGATATAACCGGATTGGTCAGATATAACTGAGTGAAAAGCAGAAATCAGGCAAGGAAAAACTGTACGGAAAGTATGTAAGAACAGAAATGACAAGGAGAGTCGGATCATGAGAATAGATAACCAACAGCAGC AAAACTGTATAAAATAGCAGAACAGCGTTTGGAATCGTATCGAAAAACTTAATAAATGTGCTGATGTATCCGATATATACATCAGCTATGGATGGCGCAGATATTTCAGGGAAGTGAAAGTATGCGCCA 129 TTerm_1204 NZ_LR027880.1 4198814 4198826 13 4198835 4198847 13 8 92 0 21 61 38 58 41 0 4198830 AAAAGAGGGTTTG CATACCCTCTTTT True CAGGCAAAA CTGTCATTG True True - AAAAGAGGGTATG GCAGACTG CAAACCCTCTTTT TTTTGCCTG 66 RIL182_RS19745 intergenic 4198697 4198919 - down AAAAAACATCATGGAAAACATATCGAGGAATCCATAGAAGAGAGTAAAAAAGAAGAATAAGATCAATGACAGAAAAGAGGGTATGGCAGACTGCAAACCCTCTTTTTTTGCCTGTATCATGGCTTTTTTTTCTAAGATTAAATTTTGACATCTATATGTGCGTATGATAAACTAAGAACAAAAGAAGCAGCAAAAGAATAGCGCGTTCTGAGGTGGCATAAT ATAAAAATCCGTCAAAAAAGAGTTGAAAAAACATCATGGAAAACATATCGAGGAATCCATAGAAGAGAGTAAAAAAGAAGAATAAGATCAATGACAGAAAAGAGGGTATGGCAGACTGCAAACCCTCTTTTTTTGCCTGTATCATGGCTTTTTTTTCTAAGATTAAATTTTGACATCTATATGTGCGTATGATAAACTAAGAACAAAAGAAGCAGCAAAAGAATAGCGCGTTCTGAGGTGGCATAATTTGGATAAATATGAATATAAATTAA AAAAAACATCATGGAAAACATATCGAGGAATCCATAGAAGAGAGTAAAAAAGAAGAATAAGATCAATGACAGAAAAGAGGGTATGGCAGACTGCAAACCCTCTTT 105 TTerm_1205 NZ_LR027880.1 4223786 4223804 19 4223812 4223830 19 7 84 0 23 65 34 62 37 0 4223807 AAATCCCTACATTGTCTGT ACAGACTTTGTAAGGATTT True TATCAAAAA AATTTGCTT True False - AAATCCTTACAAAGTCTGT TGTATTT ACAGACAATGTAGGGATTT TTTTTGATA 70 RIL182_RS19840 intergenic 4223688 4223847 - down GAGGACACAAGCAAATTAAATCCTTACAAAGTCTGTTGTATTTACAGACAATGTAGGGATTTTTTTGATATAATTGGGAAAAACAGAATATATGTTCGATAATCATTGCTTTTTTTCGAGGTATAAAGTATAATAAAAAGACAAGATGGAGGAGATCGT TGACGGTAACACTTTCATTACAATAGAGGACACAAGCAAATTAAATCCTTACAAAGTCTGTTGTATTTACAGACAATGTAGGGATTTTTTTGATATAATTGGGAAAAACAGAATATATGTTCGATAATCATTGCTTTTTTTCGAGGTATAAAGTATAATAAAAAGACAAGATGGAGGAGATCGTATGCTGAAAGAGATAATGAAAAATA GAGGACACAAGCAAATTAAATCCTTACAAAGTCTGTTGTATTTACAGACAATGTAGGGATT 61 TTerm_1206 NZ_LR027880.1 4226293 4226310 18 4226316 4226334 19 5 89 5 21 59 40 58 41 0 4226312 AAATAGGCATAACAGCAG CTGCTGTATATGCCCATTT True ACACAAAAA CACCGCACA True False - AAATGGGCATATACAGCAG AAACG CTGCTGTTATGCCTATTT TTTTTGTGT 74 RIL182_RS19855 intergenic 4226092 4226431 - down AAAGTGCATCAGGGATCTGCAGCGTATGATTCGCATGCAGATCCTTTTTTGCAGGATAACGCTATAAGGTATCGGCATGATTGTCAGTTGTGCGGTGAAATGGGCATATACAGCAGAAACGCTGCTGTTATGCCTATTTTTTTGTGTGATTTTGGGCATAATCACAAGGTTTTTCCTGTATATGGAAAATGAGGAGCCGGATAAAAAGAATACATGGTATAATGTTGGTATGATATGGGAATTAATTATGTAAGACAGAAAGGCGCAAAATGCGGATTCTGATCAAAACAACGGTAAACAGGATTTTTACAGTCACCGGACATAAAACAGGAGGCACAC GGAATACGGATTTGTCAGTGAAATAAAAGTGCATCAGGGATCTGCAGCGTATGATTCGCATGCAGATCCTTTTTTGCAGGATAACGCTATAAGGTATCGGCATGATTGTCAGTTGTGCGGTGAAATGGGCATATACAGCAGAAACGCTGCTGTTATGCCTATTTTTTTGTGTGATTTTGGGCATAATCACAAGGTTTTTCCTGTATATGGAAAATGAGGAGCCGGATAAAAAGAATACATGGTATAATGTTGGTATGATATGGGAATTAATTATGTAAGACAGAAAGGCGCAAAATGCGGATTCTGATCAAAACAACGGTAAACAGGATTTTTACAGTCACCGGACATAAAACAGGAGGCACACATGAGCAATTACTTACTGATCAAAC AAAGTGCATCAGGGATCTGCAGCGTATGATTCGCATGCAGATCCTTTTTTGCAGGATAACGCTATAAGGTATCGGCATGATTGTCAGTTGTGCGGTGAAATGGGCATATACAGCAGAAACGCTGCTGTTATGCCTATT 138 TTerm_1207 NZ_LR027880.1 4230513 4230527 15 4230533 4230547 15 5 93 0 25 60 40 57 42 0 4230529 TGCTATGCATGCTAT ATAGCTTGCATAGCA True AAAATGTCT TGTGCCCTT True False - TGCTATGCAAGCTAT TAGGC ATAGCATGCATAGCA AGACATTTT 66 RIL182_RS19870 intergenic 4230405 4230582 - down GGAGGAGTAAAATCCTCTGCTCCTGCAAGGGCACATGCTATGCAAGCTATTAGGCATAGCATGCATAGCAGACATTTTGCTTCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAGGGCACATGCTATGCAGGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGGATTTAAGC ATAAAAACAAAGGCATATTTAAGTAGGAGGAGTAAAATCCTCTGCTCCTGCAAGGGCACATGCTATGCAAGCTATTAGGCATAGCATGCATAGCAGACATTTTGCTTCGCAAAACAAGGAGTAAAATCCTCTGCTCCTGCAAGGGCACATGCTATGCAGGCATAGCAGACATTTTGCTCCGCAAAACAAGGAGGATTTAAGCATGAAAATCAGGGATTTACTTGCCG GGAGGAGTAAAATCCTCTGCTCCTGCAAGGGCACATGCTATGCAAGCTATTAGGCATAGCATGCATAGC 69 TTerm_1208 NZ_LR027880.1 4233412 4233429 18 4233434 4233451 18 4 88 0 26 61 38 56 43 0 4233431 AACCGATGGTATAGACTA TAGTCAAAACCATCGGTT True AACAAAAGA TTCTTATGC True True - AACCGATGGTTTTGACTA CGAT TAGTCTATACCATCGGTT TCTTTTGTT 68 RIL182_RS19885 intergenic 4233194 4233455 - down AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAATGAAAAGAGTGGTATTCAGAAAATGATTCTATGAAAATAAAATTGAATTGCGATAGATGTAGTATACATGGGGAAATCATAAATTGCAAGAAGAATCTGCCGTTGTATGGATTCACATAGACAAATCAAAACGAATTGCTTATACTTGATTTATGACAACATCACCCAAAAGAGGAGAAATCA GCGAGATTGCAGAAATATTTGCATAAGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGTTCTTTTGTTACAAGTTTACCTCTGAACAGTAACAATGAAAAGAGTGGTATTCAGAAAATGATTCTATGAAAATAAAATTGAATTGCGATAGATGTAGTATACATGGGGAAATCATAAATTGCAAGAAGAATCTGCCGTTGTATGGATTCACATAGACAAATCAAAACGAATTGCTTATACTTGATTTATGACAACATCACCCAAAAGAGGAGAAATCAATGATTTTATATTTTGTACGTCACG AGAAAACCGATGGTTTTGACTACGATTAGTCTATACCATCGGT 43 TTerm_1209 NZ_LR027880.1 4236867 4236887 21 4236896 4236916 21 8 95 0 37 73 26 75 25 0 4236891 AAAAACACCTGTAATTACATG CATATAATTACAGGTGTTTTT True CTATTTTCA ATTACTGAA True True - AAAAACACCTGTAATTATATG TTGTTGGG CATGTAATTACAGGTGTTTTT TGAAAATAG 82 RIL182_RS21845 intergenic 4236816 4236918 + down ACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTTAT TTACAATTCACTAAAAGAAAATTAAACTCATTATTTCAAACAACAGACTACACACTCCACGCATATTCTATTTTCAAAAACACCTGTAATTACATGCCCAACAACATATAATTACAGGTGTTTTTATTACTGAAATATTTCTTTTTTACAGA ATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTT 51 TTerm_1210 NZ_LR027880.1 4236867 4236887 21 4236896 4236916 21 8 95 0 37 73 26 75 25 0 4236891 AAAAACACCTGTAATTACATG CATATAATTACAGGTGTTTTT True CTATTTTCA ATTACTGAA True True - AAAAACACCTGTAATTATATG TTGTTGGG CATGTAATTACAGGTGTTTTT TGAAAATAG 82 RIL182_RS19900 intergenic 4236816 4236918 - down ATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTTTGAAAATAGAATATGCGTGGAGTGTGTAGTCTGTTGTTTGAAATAATGAGT TCTGTAAAAAAGAAATATTTCAGTAATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTTTGAAAATAGAATATGCGTGGAGTGTGTAGTCTGTTGTTTGAAATAATGAGTTTAATTTTCTTTTAGTGAATTGTAA ATAAAAACACCTGTAATTATATGTTGTTGGGCATGTAATTACAGGTGTTTT 51 TTerm_1211 NZ_LR027880.1 4238357 4238372 16 4238377 4238392 16 4 93 0 27 40 59 40 60 0 4238374 CGCCACACAGTTGCAA TTGCAGCTGTGTGGCG True CAAAAAAAC AAAAATAGA True False - CGCCACACAGCTGCAA TGAT TTGCAACTGTGTGGCG GTTTTTTTG 78 RIL182_RS19905 intergenic 4238246 4238487 - down AGATTTACTTGACAGAAATAAAATTTACTGGTTATAATATAGTTCCAAAACCATTTTATGGAGTGGACTTTTCTTGAGTGATGAACTCTATTTTTCGCCACACAGCTGCAATGATTTGCAACTGTGTGGCGTTTTTTTGTTGTCAGATTGCACATAAGCAGTCCCGGTTTTGTGGAATCTGCCAATTAAGAAGTCTGAAACCACGATGTGTCCTCATGTCATGAAACGAAAGGAATGAAAA TGGTGCGTATTGATATTGCAAAATAAGATTTACTTGACAGAAATAAAATTTACTGGTTATAATATAGTTCCAAAACCATTTTATGGAGTGGACTTTTCTTGAGTGATGAACTCTATTTTTCGCCACACAGCTGCAATGATTTGCAACTGTGTGGCGTTTTTTTGTTGTCAGATTGCACATAAGCAGTCCCGGTTTTGTGGAATCTGCCAATTAAGAAGTCTGAAACCACGATGTGTCCTCATGTCATGAAACGAAAGGAATGAAAAATGAACCAGAATTTTATGAAAGAAA AGATTTACTTGACAGAAATAAAATTTACTGGTTATAATATAGTTCCAAAACCATTTTATGGAGTGGACTTTTCTTGAGTGATGAACTCTATTTTTCGCCACACAGCTGCAATGATTTGCAACTGTGTGGC 130 TTerm_1212 NZ_LR027880.1 4244216 4244223 8 4244231 4244238 8 7 87 0 11 56 43 57 42 0 4244226 AACCCTCT AGAGGATT True AAAATCCGA TTACTCCTA True True - AATCCTCT CCTCACC AGAGGGTT TCGGATTTT 46 RIL182_RS19940 intergenic 4244182 4244255 - down ATAATATTTAGGAGTAAAATCCTCTCCTCACCAGAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGATTTAT TTGGTCAGAACTACGAACAAGAATAATAATATTTAGGAGTAAAATCCTCTCCTCACCAGAGGGTTCGGATTTTGCTTCGCAAAACAAGGAGGATTTATATGAATATCACAGGACACGATTTAA ATAATATTTAGGAGTAAAATCCTCTCCTCACCAGAGGGT 39 TTerm_1213 NZ_LR027880.1 4283937 4283954 18 4283960 4283977 18 5 83 0 21 47 52 46 53 0 4283956 AAAAGCCAGGGTTGCACA TGTGTAACCCCGGCTCTT True AACATTTTA TTTATGTCT True True - AAGAGCCGGGGTTACACA AAAAG TGTGCAACCCTGGCTTTT TAAAATGTT 58 RIL182_RS20095 intergenic 4283778 4283988 + down GTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTTTTTATGTCTCC TGCAAAGGTGGTTGATTTACCTTGAGTTGCTGTATGAATTGCAAAAAAGAATTAACGCATAACGAAATCGGAGCTTATAAAAAATTTGTGAATCGCGGAAGTACTTCTTATCTTTGTATTTCCTGTCTTTCAAATCGGCTTGACATTCCGGAAAATTTTATACTACAAAAAATCGAACATTTTAAAAGCCAGGGTTGCACACTTTTTGTGTAACCCCGGCTCTTTTTATGTCTCCTAAATCTGTTCGTAAAACATCCACC GGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTT 51 TTerm_1214 NZ_LR027880.1 4283937 4283954 18 4283960 4283977 18 5 83 0 21 47 52 46 53 0 4283956 AAAAGCCAGGGTTGCACA TGTGTAACCCCGGCTCTT True AACATTTTA TTTATGTCT True True - AAGAGCCGGGGTTACACA AAAAG TGTGCAACCCTGGCTTTT TAAAATGTT 58 RIL182_RS20100 intergenic 4283778 4283988 - down GGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTTTAAAATGTTCGATTTTTTGTAGTATAAAATTTTCCGGAATGTCAAGCCGATTTGAAAGACAGGAAATACAAAGATAAGAAGTACTTCCGCGATTCACAAATTTTTTATAAGCTCCGATTTCGTTATGCGTTAATTCTTTTTTGCAATTCATACAGCAAC GGTGGATGTTTTACGAACAGATTTAGGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTTTAAAATGTTCGATTTTTTGTAGTATAAAATTTTCCGGAATGTCAAGCCGATTTGAAAGACAGGAAATACAAAGATAAGAAGTACTTCCGCGATTCACAAATTTTTTATAAGCTCCGATTTCGTTATGCGTTAATTCTTTTTTGCAATTCATACAGCAACTCAAGGTAAATCAACCACCTTTGCA GGAGACATAAAAAGAGCCGGGGTTACACAAAAAGTGTGCAACCCTGGCTTT 51 TTerm_1215 NZ_LR027880.1 4336183 4336189 7 4336196 4336202 7 6 100 0 14 100 0 100 0 0 4336192 TAAAAAT ATTTTTA True GAAAATATT TAGAAAAAA True False - TAAAAAT TCCTCT ATTTTTA AATATTTTC 28 RIL182_RS20255 intergenic 4336118 4336423 - down AGAAAGATTCCACAGGCGCAAAGGTTTATGGAAGTTTCAGCAGTGTGAAGAAGGTAAAGATCAGTAAGTAGCCCAAAAAGTAAATTTATAATATATGTCATGTGGTAAAAACATGATAGAAAGTGGAGAATTTTGTTTTTTGCAGGATTCTCCACTTTTTTAACTCATGATAATGGATGTCGGCAGAGAGTGTATTCTATTATCTGTCCGGTTTTTTTCTATAAAAATTCCTCTATTTTTAATATTTTCTTCTGCTAACATAAATTTGTAACGGTAGAAAATATATAAAAGGAGGAGAACGGGGT TATTATGTCAAAGTGCGTGCCTATAAGAAAGATTCCACAGGCGCAAAGGTTTATGGAAGTTTCAGCAGTGTGAAGAAGGTAAAGATCAGTAAGTAGCCCAAAAAGTAAATTTATAATATATGTCATGTGGTAAAAACATGATAGAAAGTGGAGAATTTTGTTTTTTGCAGGATTCTCCACTTTTTTAACTCATGATAATGGATGTCGGCAGAGAGTGTATTCTATTATCTGTCCGGTTTTTTTCTATAAAAATTCCTCTATTTTTAATATTTTCTTCTGCTAACATAAATTTGTAACGGTAGAAAATATATAAAAGGAGGAGAACGGGGTTTGAAACGAAATTGGAAAGCAGGGG AGAAAGATTCCACAGGCGCAAAGGTTTATGGAAGTTTCAGCAGTGTGAAGAAGGTAAAGATCAGTAAGTAGCCCAAAAAGTAAATTTATAATATATGTCATGTGGTAAAAACATGATAGAAAGTGGAGAATTTTGTTTTTTGCAGGATTCTCCACTTTTTTAACTCATGATAATGGATGTCGGCAGAGAGTGTATTCTATTATCTGTCCGGTTTTTTTCTATAAAAATTCCTCTATTTTT 240 TTerm_1216 NZ_LR027880.1 4340740 4340764 25 4340769 4340793 25 4 84 0 30 60 40 57 42 0 4340766 AAAAAATCCCCTGTAACCAGCAATA TATAGCAGGTTGCAGGGGATTTCTT True GAACAGTTA CTATTCACT True False - AAGAAATCCCCTGCAACCTGCTATA TTTG TATTGCTGGTTACAGGGGATTTTTT TAACTGTTC 76 RIL182_RS20260 intergenic 4340713 4340840 + down CACGCTGATCTAACGCCGGAACAGTTAAAAAATCCCCTGTAACCAGCAATACAAATATAGCAGGTTGCAGGGGATTTCTTCTATTCACTGTGAATTTTATTCGTTGCGAATTTATTCGTTGCGAATT ATTTGACCTGACCAACGAGGAATAACACGCTGATCTAACGCCGGAACAGTTAAAAAATCCCCTGTAACCAGCAATACAAATATAGCAGGTTGCAGGGGATTTCTTCTATTCACTGTGAATTTTATTCGTTGCGAATTTATTCGTTGCGAATTTATTCGCATACGTACGGCATTAATG AATTCGCAACGAATAAATTCGCAACGAATAAAATTCACAGTGAATAGAAGAAATCCCCTGCAACCTGCTATATTTGTATTGCTGGTTACAGGGGATTTTT 100 TTerm_1217 NZ_LR027880.1 4340740 4340764 25 4340769 4340793 25 4 84 0 30 60 40 57 42 0 4340766 AAAAAATCCCCTGTAACCAGCAATA TATAGCAGGTTGCAGGGGATTTCTT True GAACAGTTA CTATTCACT True False - AAGAAATCCCCTGCAACCTGCTATA TTTG TATTGCTGGTTACAGGGGATTTTTT TAACTGTTC 76 RIL182_RS20265 intergenic 4340713 4340840 - down AATTCGCAACGAATAAATTCGCAACGAATAAAATTCACAGTGAATAGAAGAAATCCCCTGCAACCTGCTATATTTGTATTGCTGGTTACAGGGGATTTTTTAACTGTTCCGGCGTTAGATCAGCGTG CATTAATGCCGTACGTATGCGAATAAATTCGCAACGAATAAATTCGCAACGAATAAAATTCACAGTGAATAGAAGAAATCCCCTGCAACCTGCTATATTTGTATTGCTGGTTACAGGGGATTTTTTAACTGTTCCGGCGTTAGATCAGCGTGTTATTCCTCGTTGGTCAGGTCAAAT AATTCGCAACGAATAAATTCGCAACGAATAAAATTCACAGTGAATAGAAGAAATCCCCTGCAACCTGCTATATTTGTATTGCTGGTTACAGGGGATTTTT 100 TTerm_1218 NZ_LR027880.1 4380193 4380210 18 4380217 4380234 18 6 83 0 21 61 38 66 33 0 4380213 AAAAAAATCGCCTGCAAC GTTCCAGACGATTTTCTT True CAGGAATTA TTAAATTTT True True - AAGAAAATCGTCTGGAAC ATAAAA GTTGCAGGCGATTTTTTT TAATTCCTG 66 RIL182_RS20475 intergenic 4380018 4380246 - down ATAAAAATTTAAAAGAAAATCGTCTGGAACATAAAAGTTGCAGGCGATTTTTTTAATTCCTGACAATAGAATATCCGTGGAGAGTGTGTTCTATTGTACATAGGAAAATTACATATGATTGACAGAGAATATAGTTTTGATTATATTAAATTTAGTACCACAAGTGAAAGTTTTGAGCGGGAAATATAGACACAACACTAGTAACTATTGGGAATTGGGGTTCGCATT ATAAAAGACGTAGAAGACGCAGATAATAAAAATTTAAAAGAAAATCGTCTGGAACATAAAAGTTGCAGGCGATTTTTTTAATTCCTGACAATAGAATATCCGTGGAGAGTGTGTTCTATTGTACATAGGAAAATTACATATGATTGACAGAGAATATAGTTTTGATTATATTAAATTTAGTACCACAAGTGAAAGTTTTGAGCGGGAAATATAGACACAACACTAGTAACTATTGGGAATTGGGGTTCGCATTATGCGCAGGGAACGCAGAAATGGGG ATAAAAATTTAAAAGAAAATCGTCTGGAACATAAAAGTTGCAGGCGATTTTTT 53 TTerm_1219 NZ_LR027880.1 4382568 4382593 26 4382602 4382627 26 8 92 0 42 61 38 62 37 0 4382597 AAAAAACAGAGCCGCCGTAATTTTGA TCAAAATTATGGCGGCTCTGTTTCTT True TATTGACAA ATGGGTAAT True False - AAGAAACAGAGCCGCCATAATTTTGA AAACAAGA TCAAAATTACGGCGGCTCTGTTTTTT TTGTCAATA 92 RIL182_RS20480 intergenic 4382540 4382722 + down TTGCATGTTGTATACAATTTATTGACAAAAAAACAGAGCCGCCGTAATTTTGATCTTGTTTTCAAAATTATGGCGGCTCTGTTTCTTATGGGTAATTTTATATTGGAGATCACACAGTAAAGATTGAACAAAAAAAAGCACCAACCCCATAGCCATCTGCTATAAAATCGGTACTTCGTAAT CTGTAAACTCATTGCCTCCCGCTAATTGCATGTTGTATACAATTTATTGACAAAAAAACAGAGCCGCCGTAATTTTGATCTTGTTTTCAAAATTATGGCGGCTCTGTTTCTTATGGGTAATTTTATATTGGAGATCACACAGTAAAGATTGAACAAAAAAAAGCACCAACCCCATAGCCATCTGCTATAAAATCGGTACTTCGTAATGCGCCACCAGGGGTTCGAACCCTGG ATTACGAAGTACCGATTTTATAGCAGATGGCTATGGGGTTGGTGCTTTTTTTTGTTCAATCTTTACTGTGTGATCTCCAATATAAAATTACCCATAAGAAACAGAGCCGCCATAATTTTGAAAACAAGATCAAAATTACGGCGGCTCTGTTTTT 154 TTerm_1220 NZ_LR027880.1 4382568 4382593 26 4382602 4382627 26 8 92 0 42 61 38 62 37 0 4382597 AAAAAACAGAGCCGCCGTAATTTTGA TCAAAATTATGGCGGCTCTGTTTCTT True TATTGACAA ATGGGTAAT True False - AAGAAACAGAGCCGCCATAATTTTGA AAACAAGA TCAAAATTACGGCGGCTCTGTTTTTT TTGTCAATA 92 RIL182_RS20485 intergenic 4382540 4382722 - down ATTACGAAGTACCGATTTTATAGCAGATGGCTATGGGGTTGGTGCTTTTTTTTGTTCAATCTTTACTGTGTGATCTCCAATATAAAATTACCCATAAGAAACAGAGCCGCCATAATTTTGAAAACAAGATCAAAATTACGGCGGCTCTGTTTTTTTGTCAATAAATTGTATACAACATGCAA CCAGGGTTCGAACCCCTGGTGGCGCATTACGAAGTACCGATTTTATAGCAGATGGCTATGGGGTTGGTGCTTTTTTTTGTTCAATCTTTACTGTGTGATCTCCAATATAAAATTACCCATAAGAAACAGAGCCGCCATAATTTTGAAAACAAGATCAAAATTACGGCGGCTCTGTTTTTTTGTCAATAAATTGTATACAACATGCAATTAGCGGGAGGCAATGAGTTTACAG ATTACGAAGTACCGATTTTATAGCAGATGGCTATGGGGTTGGTGCTTTTTTTTGTTCAATCTTTACTGTGTGATCTCCAATATAAAATTACCCATAAGAAACAGAGCCGCCATAATTTTGAAAACAAGATCAAAATTACGGCGGCTCTGTTTTT 154 TTerm_1221 NZ_LR027880.1 4391005 4391014 10 4391021 4391030 10 6 90 0 15 90 10 88 11 0 4391017 AAATTTTATC GATAAAAATT True TAAAAGTGA TTATCCTAC True True - AATTTTTATC ACGTAG GATAAAATTT TCACTTTTA 38 RIL182_RS20530 intergenic 4390962 4391057 - down GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAAT CAATAGCATTTCCATTTTATCCGTAGGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAATATGTCAAATGAAGTACAAGTAAAGA GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATT 52 TTerm_1222 NZ_LR027880.1 4391007 4391035 29 4391042 4391069 28 6 82 3 26 78 21 79 20 0 4391038 ATTTTATCCTACGTGATAAAAATTTTATC GATAAAAATTTTATCCTACGGATAAAAT True AAAGTGAAA GGAAATGCT True True - ATTTTATCCGTAGGATAAAATTTTTATC ACGTAG GATAAAATTTTTATCACGTAGGATAAAAT TTTCACTTT 60 RIL182_RS20530 intergenic 4390962 4391057 - down GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAAT CAATAGCATTTCCATTTTATCCGTAGGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAATTTCACTTTTAAATTATATTATTAAAAAATCTGGAGGAAAAAAATATGTCAAATGAAGTACAAGTAAAGA GGATAAAATTTTTATCACGTAGGATAAAATTTTTATCACGTAGGATAAAA 50 TTerm_1223 NZ_LR027880.1 4401520 4401530 11 4401540 4401550 11 9 90 0 17 72 27 80 20 0 4401534 ATTTAGAGACT AGTCTGTAAAT True TAGCTAAAA AATAATCTT True False - ATTTACAGACT TTTCTTCAT AGTCTCTAAAT TTTTAGCTA 58 RIL182_RS22390 intergenic 4401458 4401685 + down AGGCTGAACATTGACAACTGAATAACTGCCAGATATTGAATTTTCAAGGTGCATAGCTAAAATTTAGAGACTATGAAGAAAAGTCTGTAAATAATAATCTTCTATGATAATGATTGAGCTGGAAGCGCTAAATTGGAGTTTCCAGCTCTTGCTATATATACGCCATGATTTCGGGCATGTCAAGAGCAGACGTCAAACGTCCTTCTCATCATGCATATAGATTCTGT GAAAATACGACTGCAGGCTGCATAAAGGCTGAACATTGACAACTGAATAACTGCCAGATATTGAATTTTCAAGGTGCATAGCTAAAATTTAGAGACTATGAAGAAAAGTCTGTAAATAATAATCTTCTATGATAATGATTGAGCTGGAAGCGCTAAATTGGAGTTTCCAGCTCTTGCTATATATACGCCATGATTTCGGGCATGTCAAGAGCAGACGTCAAACGTCCTTCTCATCATGCATATAGATTCTGTTATTCTGGGAGTCGTCCCTCATACA ACAGAATCTATATGCATGATGAGAAGGACGTTTGACGTCTGCTCTTGACATGCCCGAAATCATGGCGTATATATAGCAAGAGCTGGAAACTCCAATTTAGCGCTTCCAGCTCAATCATTATCATAGAAGATTATTATTTACAGACTTTTCTTCATAGTCTCTAAA 165 TTerm_1224 NZ_LR027880.1 4401520 4401530 11 4401540 4401550 11 9 90 0 17 72 27 80 20 0 4401534 ATTTAGAGACT AGTCTGTAAAT True TAGCTAAAA AATAATCTT True False - ATTTACAGACT TTTCTTCAT AGTCTCTAAAT TTTTAGCTA 58 RIL182_RS22230 intergenic 4401458 4401685 - down ACAGAATCTATATGCATGATGAGAAGGACGTTTGACGTCTGCTCTTGACATGCCCGAAATCATGGCGTATATATAGCAAGAGCTGGAAACTCCAATTTAGCGCTTCCAGCTCAATCATTATCATAGAAGATTATTATTTACAGACTTTTCTTCATAGTCTCTAAATTTTAGCTATGCACCTTGAAAATTCAATATCTGGCAGTTATTCAGTTGTCAATGTTCAGCCT TGTATGAGGGACGACTCCCAGAATAACAGAATCTATATGCATGATGAGAAGGACGTTTGACGTCTGCTCTTGACATGCCCGAAATCATGGCGTATATATAGCAAGAGCTGGAAACTCCAATTTAGCGCTTCCAGCTCAATCATTATCATAGAAGATTATTATTTACAGACTTTTCTTCATAGTCTCTAAATTTTAGCTATGCACCTTGAAAATTCAATATCTGGCAGTTATTCAGTTGTCAATGTTCAGCCTTTATGCAGCCTGCAGTCGTATTTTC ACAGAATCTATATGCATGATGAGAAGGACGTTTGACGTCTGCTCTTGACATGCCCGAAATCATGGCGTATATATAGCAAGAGCTGGAAACTCCAATTTAGCGCTTCCAGCTCAATCATTATCATAGAAGATTATTATTTACAGACTTTTCTTCATAGTCTCTAAA 165 TTerm_1225 NZ_LR027880.1 4408734 4408749 16 4408759 4408774 16 9 81 0 17 78 21 84 15 0 4408753 AAATATTTCCATTATT AATGACGGAGATATTT True CATAATAAA CGCCCTGCT True False - AAATATCTCCGTCATT CTCTTTTAA AATAATGGAAATATTT TTTATTATG 50 RIL182_RS20620 intergenic 4408605 4408783 - down AGCAGGGCGAAATATCTCCGTCATTCTCTTTTAAAATAATGGAAATATTTTTATTATGACGGAGATTATAGAACAGAAAATTGTATCAGGTTGCAAAAATCCTTCCTGAACTTTTTACATAACAGTCATGCACTACGGTGTGTGGCTGCTTATTTTTTTGCGAAAGGAGCAGATGCAA TAGCCGATTGGTTGCTACAAGAATAAGCAGGGCGAAATATCTCCGTCATTCTCTTTTAAAATAATGGAAATATTTTTATTATGACGGAGATTATAGAACAGAAAATTGTATCAGGTTGCAAAAATCCTTCCTGAACTTTTTACATAACAGTCATGCACTACGGTGTGTGGCTGCTTATTTTTTTGCGAAAGGAGCAGATGCAAATGAAATTAGTTTTGGCTGAAAAGC AGCAGGGCGAAATATCTCCGTCATTCTCTTTTAAAATAATGGAAATATT 49 TTerm_1226 NZ_LR027880.1 4412161 4412174 14 4412180 4412193 14 5 85 0 18 50 50 50 50 0 4412176 TACCGCCTGCCTTA TAAGGTAAGCGGTA True ATAAAAAAT CGCTAAAAC True False - TACCGCTTACCTTA GATGA TAAGGCAGGCGGTA ATTTTTTAT 52 RIL182_RS20650 intergenic 4412152 4412230 - down GCCGGACAGGGGTATAATAGATAAACATGTTTTAGCGTACCGCTTACCTTAGATGATAAGGCAGGCGGTATTTTTTAT ATACTGCACCTGAACCGGAGGCATAGCCGGACAGGGGTATAATAGATAAACATGTTTTAGCGTACCGCTTACCTTAGATGATAAGGCAGGCGGTATTTTTTATGCTCCTTTAACTCAATCGGCAGAGT GCCGGACAGGGGTATAATAGATAAACATGTTTTAGCGTACCGCTTACCTTAGATGATAAGGCAGGCGGT 69 TTerm_1227 NZ_LR027880.1 4428742 4428753 12 4428759 4428770 12 5 91 0 19 37 62 36 63 0 4428755 AAACGGGGACAG CTGTCCCCGCTT True AAGTGCAAA CCCTTCTTC True False - AAGCGGGGACAG TGTGT CTGTCCCCGTTT TTTGCACTT 70 RIL182_RS20715 intergenic 4428666 4428778 - down AAGAAGGGAAGCGGGGACAGTGTGTCTGTCCCCGTTTTTGCACTTGAAAGAGAATATAATATGGGTTTGCAAAAGATAACAGAAAAATACTTGTATAATGAGGAGGAATATG TTTCCGGGCAGGAAGACAGAGCGTGAAGAAGGGAAGCGGGGACAGTGTGTCTGTCCCCGTTTTTGCACTTGAAAGAGAATATAATATGGGTTTGCAAAAGATAACAGAAAAATACTTGTATAATGAGGAGGAATATGATGGGGGAAACAGCAAAACTGCCAG AAGAAGGGAAGCGGGGACAGTGTGTCTGTCCCCGTT 36 TTerm_1228 NZ_LR027880.1 4448604 4448628 25 4448634 4448659 26 5 96 3 40 56 43 56 44 0 4448630 AGAAAAAGAGCTTCCACGCAGTTCT AGAACATGCGTGGAAGCTCTTTTTCT True CTCCTTACA ATTTATCTT True True - AGAAAAAGAGCTTCCACGCATGTTCT GTAGT AGAACTGCGTGGAAGCTCTTTTTCT TGTAAGGAG 96 RIL182_RS20780 intergenic 4448565 4448662 + down ACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCTATT TGAAGTTGCTTACGGATGCCTGTAAACTTTACCAATAATTCTTTTTTATAGTTCCCTCCTTACAGAAAAAGAGCTTCCACGCAGTTCTACTACAGAACATGCGTGGAAGCTCTTTTTCTATTTATCTTCTGTACTTATTGCTGAAAT AATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTC 58 TTerm_1229 NZ_LR027880.1 4448604 4448628 25 4448634 4448659 26 5 96 3 40 56 43 56 44 0 4448630 AGAAAAAGAGCTTCCACGCAGTTCT AGAACATGCGTGGAAGCTCTTTTTCT True CTCCTTACA ATTTATCTT True True - AGAAAAAGAGCTTCCACGCATGTTCT GTAGT AGAACTGCGTGGAAGCTCTTTTTCT TGTAAGGAG 96 RIL182_RS20785 intergenic 4448565 4448662 - down AATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTCTGTAAGGAGGGAACTATAAAAAAGAATTATTGGTAAAGT ATTTCAGCAATAAGTACAGAAGATAAATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTCTGTAAGGAGGGAACTATAAAAAAGAATTATTGGTAAAGTTTACAGGCATCCGTAAGCAACTTCA AATAGAAAAAGAGCTTCCACGCATGTTCTGTAGTAGAACTGCGTGGAAGCTCTTTTTC 58 TTerm_1230 NZ_LR027880.1 4449005 4449013 9 4449018 4449026 9 4 88 0 13 83 16 87 12 0 4449015 AAAAATGCA TGAATTTTT True ATAAAATAA ACGATCATT True False - AAAAATTCA TTGT TGCATTTTT TTATTTTAT 34 RIL182_RS20790 intergenic 4448883 4449258 - down AACCCTCAGGGTGACAATGTCAGCGGTTTGACAGCGAAAACCATTTTTCTCAGACGATTTTAAGTTTTCTTATTTTGACATGGAATTACAGAATAGTTAGAAAAATCAAGGCTTTCCTTGACTTGGATTAACTTAGAATTATATATGTTTCCAAGGTGGATTCGAGCTCCTAAGCACTAGTTGAGGGTTCGATTCCCGCAGGGAACATCGATTTTTTTGCAGCAATGATCGTAAAAATTCATTGTTGCATTTTTTATTTTATGGGGCTTGCGAGCACCGAAAAGACAAAATGGGCACCGAGAACTAAATCTATTCAAGCACCCAATGGAGATAACTAAAGTGTAGGATAAGATTTAGGTTATCAATGAATGTCCA TGAATCCGCTGGAACGGAATGGCTGAACCCTCAGGGTGACAATGTCAGCGGTTTGACAGCGAAAACCATTTTTCTCAGACGATTTTAAGTTTTCTTATTTTGACATGGAATTACAGAATAGTTAGAAAAATCAAGGCTTTCCTTGACTTGGATTAACTTAGAATTATATATGTTTCCAAGGTGGATTCGAGCTCCTAAGCACTAGTTGAGGGTTCGATTCCCGCAGGGAACATCGATTTTTTTGCAGCAATGATCGTAAAAATTCATTGTTGCATTTTTTATTTTATGGGGCTTGCGAGCACCGAAAAGACAAAATGGGCACCGAGAACTAAATCTATTCAAGCACCCAATGGAGATAACTAAAGTGTAGGATAAGATTTAGGTTATCAATGAATGTCCAATGCTTGGACTAGGAACTTTTATGT AACCCTCAGGGTGACAATGTCAGCGGTTTGACAGCGAAAACCATTTTTCTCAGACGATTTTAAGTTTTCTTATTTTGACATGGAATTACAGAATAGTTAGAAAAATCAAGGCTTTCCTTGACTTGGATTAACTTAGAATTATATATGTTTCCAAGGTGGATTCGAGCTCCTAAGCACTAGTTGAGGGTTCGATTCCCGCAGGGAACATCGATTTTTTTGCAGCAATGATCGTAAAAATTCATTGTTGCATTTT 253 TTerm_1231 NZ_LR027880.1 4455435 4455443 9 4455448 4455456 9 4 88 0 13 27 72 25 75 0 4455445 GGCGGCTTC GAAACCGCC True ATTAAAAAG AAAGGTTCT True False - GGCGGTTTC TTGG GAAGCCGCC CTTTTTAAT 50 RIL182_RS20820 intergenic 4455431 4455572 + down AAAGGCGGCTTCCCAAGAAACCGCCAAAGGTTCTATCAGACCGAAGCCATGATATACCTACACGCAAGAAGATTATACCATGTGCTTCTTCTGATACGCAACCAAGAACTTATGTTTGTGAAGGAAAGGAGAATGTAAGAA CGTAACAAGAACTGCGGCAAATTAAAAAGGCGGCTTCCCAAGAAACCGCCAAAGGTTCTATCAGACCGAAGCCATGATATACCTACACGCAAGAAGATTATACCATGTGCTTCTTCTGATACGCAACCAAGAACTTATGTTTGTGAAGGAAAGGAGAATGTAAGAATGGCAAAATCAACAAAAAGTTATGA TTCTTACATTCTCCTTTCCTTCACAAACATAAGTTCTTGGTTGCGTATCAGAAGAAGCACATGGTATAATCTTCTTGCGTGTAGGTATATCATGGCTTCGGTCTGATAGAACCTTTGGCGGTTTCTTGGGAAGCCGC 137 TTerm_1232 NZ_LR027880.1 4464603 4464615 13 4464624 4464636 13 8 92 0 21 57 42 58 41 0 4464619 AAAACGCTTTTGG CCAGAAGCGTTTT True CTGTAGACA TCTTGTTTT True True - AAAACGCTTCTGG AGTGCTGA CCAAAAGCGTTTT TGTCTACAG 66 RIL182_RS20875 intergenic 4464544 4464717 - down ATGATAGCCAGGAAGGGAAAAAGGGGAGCCCAAAAGTGTTTATTATTGATCAAGTACACACTTTTTGAACCGAAAACAAGAAAAACGCTTCTGGAGTGCTGACCAAAAGCGTTTTGTCTACAGTCTGAAAGGAAGCCCCCAAAAAGGGGGCTTCCTTTCTTTAATATCGGCAA GCATGAATCTGAAAAACTGGCAAAGATGATAGCCAGGAAGGGAAAAAGGGGAGCCCAAAAGTGTTTATTATTGATCAAGTACACACTTTTTGAACCGAAAACAAGAAAAACGCTTCTGGAGTGCTGACCAAAAGCGTTTTGTCTACAGTCTGAAAGGAAGCCCCCAAAAAGGGGGCTTCCTTTCTTTAATATCGGCAAATGTGTTTATTTTTGATTACTCTTG ATGATAGCCAGGAAGGGAAAAAGGGGAGCCCAAAAGTGTTTATTATTGATCAAGTACACACTTTTTGAACCGAAAACAAGAAAAACGCTTCTGGAGTGCTGACCAAAAGCGTTT 114 TTerm_1233 NZ_LR027880.1 4467099 4467115 17 4467120 4467136 17 4 88 0 24 70 29 73 26 0 4467117 AAAGAACAGGGTACATA TATATACACTGTTCTTT True TTACAAAAA GTATAATCC True False - AAAGAACAGTGTATATA GAAA TATGTACCCTGTTCTTT TTTTTGTAA 48 RIL182_RS20885 intergenic 4466969 4467320 - down AAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACG TGATTAACCGGCTATTTGGAAAATGAAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTTTTTTTGTAAAATTATGTTAAGCACTTGACATGATAATCAAAATGTGCGGTCGCTCTAACTATCTTTTTTAAGATAGTTAGAGCGACCCTTGTAATTAAGAAAATATCTTGATTGCAAGGAGAATTACACGATGAATTATTCTACAGAGGTAAAAC AAAAGTTCTAGGTATTAACTTTTTAGGGAAACATTCGCTTATTATTTACATGATACACCAAACGATCTGCTATGTTGTAGCGTTCTTGGTTTCCGAGATTTTTTAATATTGAGCCGTTGATCGGTGGAGTAAACAAGAAAGGAAGCCCCCAAAAAGGGCAATGTCATTTAGATAAGGATTATACAAAGAACAGTGTATATAGAAATATGTACCCTGTTCTT 221 TTerm_1234 NZ_LR027880.1 4474054 4474065 12 4474074 4474085 12 8 83 0 14 58 41 60 40 0 4474069 AAACGGCAATGA TCATTACCGCTT True AACAAAAAA AAAATAGAG True False - AAGCGGTAATGA GAGAAAAA TCATTGCCGTTT TTTTTTGTT 36 RIL182_RS21030 intergenic 4473773 4474095 - down GCTCTATTTTAAGCGGTAATGAGAGAAAAATCATTGCCGTTTTTTTTGTTGTTTTTCTGCTAACAGCAAATCAAAAAATGAGCATTTTTGCTAACAGAAAATGCAAATTGCTAACAGTAAAATTATTGTGGATCTGCTAACAGGAATGAAAAGCTATAATGCAACTGGTGTAAAAGGTTGTAAATTCTTGTAACTAACAAAAGGGTAATGATTACAAATATTTCTGCTTGGAAAATATCAAGCCTGAATGAGTATTCTGTTCAGATTAGATTAGGTTCTAATCTGGGCGGATTTTTTTATTTCAGGAAGAAGGAGGATGCCT TGTAGGTTCGATTCCTATAGGGAACGCTCTATTTTAAGCGGTAATGAGAGAAAAATCATTGCCGTTTTTTTTGTTGTTTTTCTGCTAACAGCAAATCAAAAAATGAGCATTTTTGCTAACAGAAAATGCAAATTGCTAACAGTAAAATTATTGTGGATCTGCTAACAGGAATGAAAAGCTATAATGCAACTGGTGTAAAAGGTTGTAAATTCTTGTAACTAACAAAAGGGTAATGATTACAAATATTTCTGCTTGGAAAATATCAAGCCTGAATGAGTATTCTGTTCAGATTAGATTAGGTTCTAATCTGGGCGGATTTTTTTATTTCAGGAAGAAGGAGGATGCCTATGGCAGAAAAAGTGGATCAGATGA GCTCTATTTTAAGCGGTAATGAGAGAAAAATCATTGCCGTT 41 TTerm_1235 NZ_LR027880.1 4492937 4492944 8 4492949 4492956 8 4 87 0 11 43 56 42 57 0 4492946 AGACCACA TGTGGCCT True GAAAGAAAA ATGCTGATA True False - AGGCCACA TTTT TGTGGTCT TTTTCTTTC 54 RIL182_RS21015 intergenic 4492777 4492955 - down GGCCACATTTTTGTGGTCTTTTCTTTCCTTAAGAAGAATGGATGAATAATGAGGTGGTGCATTTTGTACCACCTATTTGTTCATTCAAAGATATTTTATGGGTAAAGTAAGCAGAGACCTTCAAACAGACAGAAGGTAGTTGGTGCCTTAGGTAAATAATCAGAAAGGGCATACTAGG AAGGAAGAAAGAAATTATCAGCATAGGCCACATTTTTGTGGTCTTTTCTTTCCTTAAGAAGAATGGATGAATAATGAGGTGGTGCATTTTGTACCACCTATTTGTTCATTCAAAGATATTTTATGGGTAAAGTAAGCAGAGACCTTCAAACAGACAGAAGGTAGTTGGTGCCTTAGGTAAATAATCAGAAAGGGCATACTAGGATGAAGTTTTCGGAATCATTAAAAA GGCCACATTTTTGTGGTC 18 TTerm_1236