chrom	Lstart	Lend	Lstem	Rstart	Rend	Rstem	loop	match%	Indels	score	AT	GC	ATpairs	GCpairs	GTpairs	Center	Lseq	Rseq	intergenic	tailL	tailR	polyTL	polyTR	strand	TTseq	FACoPscore	locus_tag	type	start	end	strand_y	stream	seq	aug_seq	3primeUTR	3primeUTRlen	ID
Brie28_concat	1356	1367	12	1376	1387	12	8	100	0	24	66	33	66	33	0	1371	AAAAGCAACTGA	TCAGTTGCTTTT	True	CGAACTTTA	CTTGTGTCT	True	True	+	AAAAGCAACTGA TACTGCAT TCAGTTGCTTTT CTTGTGTCT	64	CDS_0002	intergenic	1357	1410	+	down	AAGCAACTGATACTGCATTCAGTTGCTTTTCTTGTGTCTTTATAGACTCTACT	TGAATACGTTGTAAACGAACTTTAAAAGCAACTGATACTGCATTCAGTTGCTTTTCTTGTGTCTTTATAGACTCTACTTAAAGTTCAAAATCCTCCCTCTCCT	AAGCAACTGATACTGCATTCAGTTGCTTTT	30	TTerm_0001
Brie28_concat	1356	1367	12	1376	1387	12	8	100	0	24	66	33	66	33	0	1371	AAAAGCAACTGA	TCAGTTGCTTTT	True	CGAACTTTA	CTTGTGTCT	True	True	+	AAAAGCAACTGA TACTGCAT TCAGTTGCTTTT CTTGTGTCT	64	CDS_0003	intergenic	1357	1410	-	down	AGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTT	AGGAGAGGGAGGATTTTGAACTTTAAGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTTTTAAAGTTCGTTTACAACGTATTCA	AAGCAACTGATACTGCATTCAGTTGCTTTT	30	TTerm_0002
Brie28_concat	21530	21542	13	21551	21563	13	8	76	0	11	84	15	90	10	0	21546	TAAAATTGATTTT	AAAACCCTTTTTA	True	AAGTAAAAT	AAATTTACA	True	True	+	TAAAATTGATTTT TCATGAGC AAAACCCTTTTTA AAATTTACA	38	CDS_0022	intergenic	21460	21568	-	down	AATTTTAAAAAGGGTTTTGCTCATGAAAAATCAATTTTATTTTACTTTCATTTTTCGTCATGTTATAATTAGGGGTAATGCAATTATGGTAAGGTAGGGGGCGATTAG	TTTTAATAGTCTATATGATTTTGTAAATTTTAAAAAGGGTTTTGCTCATGAAAAATCAATTTTATTTTACTTTCATTTTTCGTCATGTTATAATTAGGGGTAATGCAATTATGGTAAGGTAGGGGGCGATTAGATGGCAATTGATAAAACTTTAATAG	CTAATCGCCCCCTACCTTACCATAATTGCATTACCCCTAATTATAACATGACGAAAAATGAAAGTAAAATAAAATTGATTTTTCATGAGCAAAACCCTTTTTA	103	TTerm_0003
Brie28_concat	21706	21717	12	21722	21733	12	4	100	0	24	50	50	50	50	0	21719	TAGGACGTCTGA	TCAGACGTCCTA	True	ATGAAACTT	TTTTTTGTT	False	True	+	TAGGACGTCTGA AATC TCAGACGTCCTA TTTTTTGTT	72	CDS_0023	intergenic	21699	21832	-	down	ATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTC	CAGCTCGCAAACGTAAAAAAATCTAATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTCATGTGTCCTTTAGTTGAACAAATAA	GAAACTTAGGACGTCTGAAATCTCAGACGTCCTA	34	TTerm_0004
Brie28_concat	21782	21793	12	21800	21811	12	6	100	0	24	75	25	75	25	0	21796	AAAAAAGCTTGA	TCAAGCTTTTTT	True	ATAAAAAGA	TCTGTTAAT	True	True	+	AAAAAAGCTTGA AAATAC TCAAGCTTTTTT TCTGTTAAT	72	CDS_0023	intergenic	21699	21832	-	down	ATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTC	CAGCTCGCAAACGTAAAAAAATCTAATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTCATGTGTCCTTTAGTTGAACAAATAA	GAAACTTAGGACGTCTGAAATCTCAGACGTCCTATTTTTTGTTTCTCATGACTACTAACTGACTTATTTATTCGATAAAAAGAAAAAAGCTTGAAAATACTCAAGCTTTTTT	112	TTerm_0005
Brie28_concat	1356	1367	12	1376	1387	12	8	100	0	24	66	33	66	33	0	1371	AAAAGCAACTGA	TCAGTTGCTTTT	True	CGAACTTTA	CTTGTGTCT	True	True	-	AAAAGCAACTGA ATGCAGTA TCAGTTGCTTTT TAAAGTTCG	64	CDS_0002	intergenic	1357	1410	+	down	AAGCAACTGATACTGCATTCAGTTGCTTTTCTTGTGTCTTTATAGACTCTACT	TGAATACGTTGTAAACGAACTTTAAAAGCAACTGATACTGCATTCAGTTGCTTTTCTTGTGTCTTTATAGACTCTACTTAAAGTTCAAAATCCTCCCTCTCCT	AGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTTT	54	TTerm_0006
Brie28_concat	1356	1367	12	1376	1387	12	8	100	0	24	66	33	66	33	0	1371	AAAAGCAACTGA	TCAGTTGCTTTT	True	CGAACTTTA	CTTGTGTCT	True	True	-	AAAAGCAACTGA ATGCAGTA TCAGTTGCTTTT TAAAGTTCG	64	CDS_0003	intergenic	1357	1410	-	down	AGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTT	AGGAGAGGGAGGATTTTGAACTTTAAGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTTTTAAAGTTCGTTTACAACGTATTCA	AGTAGAGTCTATAAAGACACAAGAAAAGCAACTGAATGCAGTATCAGTTGCTTT	54	TTerm_0007
Brie28_concat	2106	2117	12	2124	2135	12	6	91	0	19	45	54	45	54	0	2120	CCTCCTACTTAC	GTAAGTGGGAGG	True	AGAAAAAAC	GGAAGTTGC	True	False	-	CCTCCCACTTAC GAATAA GTAAGTAGGAGG GTTTTTTCT	54	CDS_0004	intergenic	2096	2275	-	down	GACATAATTTATCTTTGTTTGAGGTATAATCGAAGCTCTCCCAATACAGATAGAAGGAAGTCAATAAATCAGAAAATGTTTTTCTTCTTTTGTTGTTTCAGAGTTTGGTCAAAGAAAAAATCCTCAGCTGTGCAACTTCCCCTCCCACTTACGAATAAGTAAGTAGGAGGTTTTTTCTT	GTATCGGCATATATACTCAGTTATAGACATAATTTATCTTTGTTTGAGGTATAATCGAAGCTCTCCCAATACAGATAGAAGGAAGTCAATAAATCAGAAAATGTTTTTCTTCTTTTGTTGTTTCAGAGTTTGGTCAAAGAAAAAATCCTCAGCTGTGCAACTTCCCCTCCCACTTACGAATAAGTAAGTAGGAGGTTTTTTCTTATGTATAGTATTGTAGCTGAGGAGT	GACATAATTTATCTTTGTTTGAGGTATAATCGAAGCTCTCCCAATACAGATAGAAGGAAGTCAATAAATCAGAAAATGTTTTTCTTCTTTTGTTGTTTCAGAGTTTGGTCAAAGAAAAAATCCTCAGCTGTGCAACTTCCCCTCCCACTTACGAATAAGTAAGTAGGAG	169	TTerm_0008
Brie28_concat	11401	11406	6	11412	11417	6	5	100	0	12	33	66	33	66	0	11408	GCGACT	AGTCGC	True	AAAGAAAAG	CATTGCTAT	True	False	-	GCGACT TGAAC AGTCGC CTTTTCTTT	56	CDS_0011	intergenic	11323	11442	-	down	ATTTGTTTTTATATTCATAGCAATGGCGACTTGAACAGTCGCTTTTCTTTTTGTATTAGGCAAAAAGCCCAGAAAATGGTATAATTGAGTGGATTGTAGTTTGTAAGAAGGGAAATAAT	TGAAGAGTCAGAAGACGAATAATTGATTTGTTTTTATATTCATAGCAATGGCGACTTGAACAGTCGCTTTTCTTTTTGTATTAGGCAAAAAGCCCAGAAAATGGTATAATTGAGTGGATTGTAGTTTGTAAGAAGGGAAATAATATGCAACACGTTTTTATTATCGGAA	ATTTGTTTTTATATTCATAGCAATGGCGACTTGAACAGTCG	41	TTerm_0009
Brie28_concat	13401	13415	15	13422	13435	14	6	86	6	13	65	34	61	38	0	13418	AATTCCAAAACGTCT	AGTCGTTTGGAATT	True	ATAACACTA	CCGACTTAA	True	False	-	AATTCCAAACGACT TTTATG AGACGTTTTGGAATT TAGTGTTAT	50	CDS_0014	intergenic	13252	13551	-	down	ATTTGATGGCGATGGCCAGCATGATATTGAATCCTTGTCAGATTTACTAGAGCCAATTCGAAAAAATGAAGCAGACCTAGTTATTGGTTCTCGTTTTGTTGGTGATGTTAAGTCGGAATTCCAAACGACTTTTATGAGACGTTTTGGAATTAGTGTTATTTCCAATCTTATCAAGGGACAACTGGACAAAGAGTTTTACAAACAAGAAGTGAAATAAAAACCAAGGTCAGTTGAATTAATCTGAAATATATTTGGCTGCCCTTTTTCAATAGAGTTTTCAGGAGAAACTACGTATAAAA	AGCATGACTATGATGTAGCAGTTTAATTTGATGGCGATGGCCAGCATGATATTGAATCCTTGTCAGATTTACTAGAGCCAATTCGAAAAAATGAAGCAGACCTAGTTATTGGTTCTCGTTTTGTTGGTGATGTTAAGTCGGAATTCCAAACGACTTTTATGAGACGTTTTGGAATTAGTGTTATTTCCAATCTTATCAAGGGACAACTGGACAAAGAGTTTTACAAACAAGAAGTGAAATAAAAACCAAGGTCAGTTGAATTAATCTGAAATATATTTGGCTGCCCTTTTTCAATAGAGTTTTCAGGAGAAACTACGTATAAAAATGTCAGATTTACTCATTATTATTC	ATTTGATGGCGATGGCCAGCATGATATTGAATCCTTGTCAGATTTACTAGAGCCAATTCGAAAAAATGAAGCAGACCTAGTTATTGGTTCTCGTTTTGTTGGTGATGTTAAGTCGGAATTCCAAACGACTTTTATGAGACGTTTTGGAAT	150	TTerm_0010
Brie28_concat	17140	17147	8	17153	17160	8	5	100	0	16	62	37	62	37	0	17149	AAAGCAGA	TCTGCTTT	True	TAACAAAAA	CATTTATAA	True	False	-	AAAGCAGA TTTTT TCTGCTTT TTTTTGTTA	56	CDS_0018	intergenic	17093	17211	-	down	AAGAAAGCCAATTATTTATACAAATGAATTAGTTGAATAGAATTATAAATGAAAGCAGATTTTTTCTGCTTTTTTTGTTAAAATAAAACTAATAGTATTGAATTACGAGGAGAAAAAT	TGTATATTGTTAAAGAAAAAGGGTGAAGAAAGCCAATTATTTATACAAATGAATTAGTTGAATAGAATTATAAATGAAAGCAGATTTTTTCTGCTTTTTTTGTTAAAATAAAACTAATAGTATTGAATTACGAGGAGAAAAATATGATTCTAGTAACAGGTGCAAATG	AAGAAAGCCAATTATTTATACAAATGAATTAGTTGAATAGAATTATAAATGAAAGCAGATTTTTTCTGCTT	71	TTerm_0011
Brie28_concat	18502	18507	6	18515	18520	6	7	100	0	12	16	83	16	83	0	18510	GGGCCT	AGGCCC	True	CAAAATCAG	CTTCCATTT	True	False	-	GGGCCT GATTGTT AGGCCC CTGATTTTG	64	CDS_0020	intergenic	18482	18536	-	down	AGATAGTAAATGGAAGGGGCCTGATTGTTAGGCCCTGATTTTGGAGGAAAAGCT	AACTTAAAGACTTTATTGAAGACTAAGATAGTAAATGGAAGGGGCCTGATTGTTAGGCCCTGATTTTGGAGGAAAAGCTATGTCTGAAGTGAAATACACTGAAG	AGATAGTAAATGGAAGGGGCCTGATTGTTAGGCC	34	TTerm_0012
Brie28_concat	21530	21542	13	21551	21563	13	8	76	0	11	84	15	90	10	0	21546	TAAAATTGATTTT	AAAACCCTTTTTA	True	AAGTAAAAT	AAATTTACA	True	True	-	TAAAAAGGGTTTT GCTCATGA AAAATCAATTTTA ATTTTACTT	38	CDS_0022	intergenic	21460	21568	-	down	AATTTTAAAAAGGGTTTTGCTCATGAAAAATCAATTTTATTTTACTTTCATTTTTCGTCATGTTATAATTAGGGGTAATGCAATTATGGTAAGGTAGGGGGCGATTAG	TTTTAATAGTCTATATGATTTTGTAAATTTTAAAAAGGGTTTTGCTCATGAAAAATCAATTTTATTTTACTTTCATTTTTCGTCATGTTATAATTAGGGGTAATGCAATTATGGTAAGGTAGGGGGCGATTAGATGGCAATTGATAAAACTTTAATAG	AATTTTAAAAAGGGTTTTGCTCATGAAAAATCAATTTT	38	TTerm_0013
Brie28_concat	21782	21793	12	21800	21811	12	6	100	0	24	75	25	75	25	0	21796	AAAAAAGCTTGA	TCAAGCTTTTTT	True	ATAAAAAGA	TCTGTTAAT	True	True	-	AAAAAAGCTTGA GTATTT TCAAGCTTTTTT TCTTTTTAT	72	CDS_0023	intergenic	21699	21832	-	down	ATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTC	CAGCTCGCAAACGTAAAAAAATCTAATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTTTCTTTTTATCGAATAAATAAGTCAGTTAGTAGTCATGAGAAACAAAAAATAGGACGTCTGAGATTTCAGACGTCCTAAGTTTCATGTGTCCTTTAGTTGAACAAATAA	ATTAAGAATGAAATTAACAGAAAAAAAGCTTGAGTATTTTCAAGCTTTTT	50	TTerm_0014