chrom	Lstart	Lend	Lstem	Rstart	Rend	Rstem	loop	match%	Indels	score	AT	GC	ATpairs	GCpairs	GTpairs	Center	Lseq	Rseq	intergenic	tailL	tailR	polyTL	polyTR	strand	TTseq	FACoPscore	locus_tag	type	start	end	strand_y	stream	seq	aug_seq	3primeUTR	3primeUTRlen	ID
t3SS_PAO1	3080	3088	9	3093	3101	9	4	100	0	18	33	66	33	66	0	3090	AAAGGGGCC	GGCCCCTTT	True	AGCATGTGA	TTTTCGGCG	False	True	+	AAAGGGGCC TTCG GGCCCCTTT TTTTCGGCG	84	CDS_0002	intergenic	3062	3168	+	down	CCCGTAGCAAGCATGTGAAAGGGGCCTTCGGGCCCCTTTTTTTCGGCGCCAGGTCGCAGCGTCTTTCGTCGCCGGTGCCGCGGCGGCTGCCCTGCCCGATAGCGAT	ACACGGGATCCCGGACAAGGACTGACCCGTAGCAAGCATGTGAAAGGGGCCTTCGGGCCCCTTTTTTTCGGCGCCAGGTCGCAGCGTCTTTCGTCGCCGGTGCCGCGGCGGCTGCCCTGCCCGATAGCGATCAGGGCGTATCCGTCTGCTGGCTTT	CCCGTAGCAAGCATGTGAAAGGGGCCTTCGGGCCCCTTT	39	TTerm_0001
t3SS_PAO1	3080	3088	9	3093	3101	9	4	100	0	18	33	66	33	66	0	3090	AAAGGGGCC	GGCCCCTTT	True	AGCATGTGA	TTTTCGGCG	False	True	+	AAAGGGGCC TTCG GGCCCCTTT TTTTCGGCG	84	CDS_0003	intergenic	3062	3168	-	down	ATCGCTATCGGGCAGGGCAGCCGCCGCGGCACCGGCGACGAAAGACGCTGCGACCTGGCGCCGAAAAAAAGGGGCCCGAAGGCCCCTTTCACATGCTTGCTACGGG	AAAGCCAGCAGACGGATACGCCCTGATCGCTATCGGGCAGGGCAGCCGCCGCGGCACCGGCGACGAAAGACGCTGCGACCTGGCGCCGAAAAAAAGGGGCCCGAAGGCCCCTTTCACATGCTTGCTACGGGTCAGTCCTTGTCCGGGATCCCGTGT	CCCGTAGCAAGCATGTGAAAGGGGCCTTCGGGCCCCTTT	39	TTerm_0002
t3SS_PAO1	18453	18466	14	18471	18484	14	4	85	0	18	57	42	58	41	0	18468	AGGAAAAGGCCACA	TGTGGCTTTTTTCT	True	CGCGCGGGA	TAAAAGAAA	True	True	+	AGGAAAAGGCCACA GCGA TGTGGCTTTTTTCT TAAAAGAAA	68	CDS_0022	intergenic	18436	18562	+	down	GCCGTCTCCGCGCGGGAGGAAAAGGCCACAGCGATGTGGCTTTTTTCTTAAAAGAAAAGTCTCTCAGTGACAAAAGCGATGCATAGCCCGGTGCTAGCATGCGCTGAGCTTTAGGAGGCGCCCCCA	GCGTGCGGCGGCCGGAGTGGTCTGAGCCGTCTCCGCGCGGGAGGAAAAGGCCACAGCGATGTGGCTTTTTTCTTAAAAGAAAAGTCTCTCAGTGACAAAAGCGATGCATAGCCCGGTGCTAGCATGCGCTGAGCTTTAGGAGGCGCCCCCATGGATTTAACGAGCAAGGTCAACCG	GCCGTCTCCGCGCGGGAGGAAAAGGCCACAGCGATGTGGCTTTTTTCT	48	TTerm_0003
t3SS_PAO1	49722	49732	11	49739	49749	11	6	90	0	17	13	86	10	90	0	49735	CGCCGCCAGCC	GGTTGGCGGCG	True	CATGCGAGC	TTTTCGTTT	False	True	+	CGCCGCCAGCC TCCCGG GGTTGGCGGCG TTTTCGTTT	66	CDS_0056	intergenic	49700	49758	+	down	GCCGGCCCCGCGCCATGCGAGCGCCGCCAGCCTCCCGGGGTTGGCGGCGTTTTCGTTT	CGCGCGCCAGCCGACCGGCGCCTGAGCCGGCCCCGCGCCATGCGAGCGCCGCCAGCCTCCCGGGGTTGGCGGCGTTTTCGTTTCAGGCCGGGCAGTCGAGGATGAAGC	GCCGGCCCCGCGCCATGCGAGCGCCGCCAGCCTCCCGGGGTTGGCGGCG	49	TTerm_0004
t3SS_PAO1	49722	49732	11	49739	49749	11	6	90	0	17	13	86	10	90	0	49735	CGCCGCCAGCC	GGTTGGCGGCG	True	CATGCGAGC	TTTTCGTTT	False	True	+	CGCCGCCAGCC TCCCGG GGTTGGCGGCG TTTTCGTTT	66	CDS_0057	intergenic	49700	49758	-	down	AAACGAAAACGCCGCCAACCCCGGGAGGCTGGCGGCGCTCGCATGGCGCGGGGCCGGC	GCTTCATCCTCGACTGCCCGGCCTGAAACGAAAACGCCGCCAACCCCGGGAGGCTGGCGGCGCTCGCATGGCGCGGGGCCGGCTCAGGCGCCGGTCGGCTGGCGCGCG	GCCGGCCCCGCGCCATGCGAGCGCCGCCAGCCTCCCGGGGTTGGCGGCG	49	TTerm_0005
t3SS_PAO1	51616	51627	12	51632	51643	12	4	100	0	24	33	66	33	66	0	51629	GAAAAGCCCGGC	GCCGGGCTTTTC	True	GCCTGAACG	AGGGTTGCG	True	True	+	GAAAAGCCCGGC GTGA GCCGGGCTTTTC AGGGTTGCG	96	CDS_0060	intergenic	51613	51685	+	down	ACGAAAAGCCCGGCGTGAGCCGGGCTTTTCAGGGTTGCGGGGAAAAGAAAAACGTTCCTGGCAGGCGGCGTT	GGCGGCCGAGGAAAAGCTGGCCTGAACGAAAAGCCCGGCGTGAGCCGGGCTTTTCAGGGTTGCGGGGAAAAGAAAAACGTTCCTGGCAGGCGGCGTTCAACCCTGCGCATCGGTGTCGCTCG	ACGAAAAGCCCGGCGTGAGCCGGGCTTTTC	30	TTerm_0006
t3SS_PAO1	51616	51627	12	51632	51643	12	4	100	0	24	33	66	33	66	0	51629	GAAAAGCCCGGC	GCCGGGCTTTTC	True	GCCTGAACG	AGGGTTGCG	True	True	+	GAAAAGCCCGGC GTGA GCCGGGCTTTTC AGGGTTGCG	96	CDS_0061	intergenic	51613	51685	-	down	AACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTTCGT	CGAGCGACACCGATGCGCAGGGTTGAACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTTCGTTCAGGCCAGCTTTTCCTCGGCCGCC	ACGAAAAGCCCGGCGTGAGCCGGGCTTTTC	30	TTerm_0007
t3SS_PAO1	53397	53408	12	53413	53424	12	4	100	0	24	33	66	33	66	0	53410	AAAACGCCGGGC	GCCCGGCGTTTT	True	CGCAATGAA	CGTTTCCGC	True	True	+	AAAACGCCGGGC ATCA GCCCGGCGTTTT CGTTTCCGC	96	CDS_0063	intergenic	53381	53439	+	down	GCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTTCGTTTCCGCCTCGCT	GCGTCAGGCCGATCCGGCCGCCTGAGCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTTCGTTTCCGCCTCGCTCAGCCGCGCTGGCGTTTCGGCAGCA	GCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTT	43	TTerm_0008
t3SS_PAO1	53397	53408	12	53413	53424	12	4	100	0	24	33	66	33	66	0	53410	AAAACGCCGGGC	GCCCGGCGTTTT	True	CGCAATGAA	CGTTTCCGC	True	True	+	AAAACGCCGGGC ATCA GCCCGGCGTTTT CGTTTCCGC	96	CDS_0064	intergenic	53381	53439	-	down	AGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGC	TGCTGCCGAAACGCCAGCGCGGCTGAGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGCTCAGGCGGCCGGATCGGCCTGACGC	GCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTT	43	TTerm_0009
t3SS_PAO1	14642	14654	13	14660	14672	13	5	76	0	11	30	69	30	70	0	14656	CGACCGTGCCTGA	TCCGGCAACGTCG	True	CAAAAACCC	ATCCCTACC	True	False	-	CGACGTTGCCGGA GCCTG TCAGGCACGGTCG GGGTTTTTG	62	CDS_0017	intergenic	14654	14682	+	down	CAGGCTCCGGCAACGTCGATCCCTACCA	ACGACAAAAACCCGACCGTGCCTGACAGGCTCCGGCAACGTCGATCCCTACCATGGGCGACATGAACGAATACACCGA	TGGTAGGGATCGACGTTGCCGGAGCCTGTCAGGCACGGTC	40	TTerm_0010
t3SS_PAO1	18453	18466	14	18471	18484	14	4	85	0	18	57	42	58	41	0	18468	AGGAAAAGGCCACA	TGTGGCTTTTTTCT	True	CGCGCGGGA	TAAAAGAAA	True	True	-	AGAAAAAAGCCACA TCGC TGTGGCCTTTTCCT TCCCGCGCG	68	CDS_0022	intergenic	18436	18562	+	down	GCCGTCTCCGCGCGGGAGGAAAAGGCCACAGCGATGTGGCTTTTTTCTTAAAAGAAAAGTCTCTCAGTGACAAAAGCGATGCATAGCCCGGTGCTAGCATGCGCTGAGCTTTAGGAGGCGCCCCCA	GCGTGCGGCGGCCGGAGTGGTCTGAGCCGTCTCCGCGCGGGAGGAAAAGGCCACAGCGATGTGGCTTTTTTCTTAAAAGAAAAGTCTCTCAGTGACAAAAGCGATGCATAGCCCGGTGCTAGCATGCGCTGAGCTTTAGGAGGCGCCCCCATGGATTTAACGAGCAAGGTCAACCG	TGGGGGCGCCTCCTAAAGCTCAGCGCATGCTAGCACCGGGCTATGCATCGCTTTTGTCACTGAGAGACTTTTCTTTTAAGAAAAAAGCCACATCGCTGTGGCCTTTTCC	109	TTerm_0011
t3SS_PAO1	51616	51627	12	51632	51643	12	4	100	0	24	33	66	33	66	0	51629	GAAAAGCCCGGC	GCCGGGCTTTTC	True	GCCTGAACG	AGGGTTGCG	True	True	-	GAAAAGCCCGGC TCAC GCCGGGCTTTTC CGTTCAGGC	96	CDS_0060	intergenic	51613	51685	+	down	ACGAAAAGCCCGGCGTGAGCCGGGCTTTTCAGGGTTGCGGGGAAAAGAAAAACGTTCCTGGCAGGCGGCGTT	GGCGGCCGAGGAAAAGCTGGCCTGAACGAAAAGCCCGGCGTGAGCCGGGCTTTTCAGGGTTGCGGGGAAAAGAAAAACGTTCCTGGCAGGCGGCGTTCAACCCTGCGCATCGGTGTCGCTCG	AACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTT	69	TTerm_0012
t3SS_PAO1	51616	51627	12	51632	51643	12	4	100	0	24	33	66	33	66	0	51629	GAAAAGCCCGGC	GCCGGGCTTTTC	True	GCCTGAACG	AGGGTTGCG	True	True	-	GAAAAGCCCGGC TCAC GCCGGGCTTTTC CGTTCAGGC	96	CDS_0061	intergenic	51613	51685	-	down	AACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTTCGT	CGAGCGACACCGATGCGCAGGGTTGAACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTTCGTTCAGGCCAGCTTTTCCTCGGCCGCC	AACGCCGCCTGCCAGGAACGTTTTTCTTTTCCCCGCAACCCTGAAAAGCCCGGCTCACGCCGGGCTTTT	69	TTerm_0013
t3SS_PAO1	51985	51994	10	51999	52008	10	4	100	0	20	40	60	40	60	0	51996	AAAGCCCGGT	ACCGGGCTTT	True	GGCGCAAAA	CGCTGGAGC	True	False	-	AAAGCCCGGT TGAT ACCGGGCTTT TTTTGCGCC	80	CDS_0062	intergenic	51873	52023	-	down	AGGCCCGCTCCAGCGAAAGCCCGGTTGATACCGGGCTTTTTTGCGCCCAATAATTACTTATTACGCAAAGGTAACTCTCCTGAACTGCTATTTTTAAAAAATTATTACGGATTATCCTGATGACATTCCCAAGGAAAACCGGAGGTCATC	AGCTGGACAAGAAGCACCTGGGCTAAGGCCCGCTCCAGCGAAAGCCCGGTTGATACCGGGCTTTTTTGCGCCCAATAATTACTTATTACGCAAAGGTAACTCTCCTGAACTGCTATTTTTAAAAAATTATTACGGATTATCCTGATGACATTCCCAAGGAAAACCGGAGGTCATCATGAAACGCAATGTCTTCGCCGCCA	AGGCCCGCTCCAGCGAAAGCCCGGTTGATACCGGGCTT	38	TTerm_0014
t3SS_PAO1	53397	53408	12	53413	53424	12	4	100	0	24	33	66	33	66	0	53410	AAAACGCCGGGC	GCCCGGCGTTTT	True	CGCAATGAA	CGTTTCCGC	True	True	-	AAAACGCCGGGC TGAT GCCCGGCGTTTT TTCATTGCG	96	CDS_0063	intergenic	53381	53439	+	down	GCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTTCGTTTCCGCCTCGCT	GCGTCAGGCCGATCCGGCCGCCTGAGCAGGCGCGCAATGAAAAACGCCGGGCATCAGCCCGGCGTTTTCGTTTCCGCCTCGCTCAGCCGCGCTGGCGTTTCGGCAGCA	AGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTT	42	TTerm_0015
t3SS_PAO1	53397	53408	12	53413	53424	12	4	100	0	24	33	66	33	66	0	53410	AAAACGCCGGGC	GCCCGGCGTTTT	True	CGCAATGAA	CGTTTCCGC	True	True	-	AAAACGCCGGGC TGAT GCCCGGCGTTTT TTCATTGCG	96	CDS_0064	intergenic	53381	53439	-	down	AGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGC	TGCTGCCGAAACGCCAGCGCGGCTGAGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTTTTCATTGCGCGCCTGCTCAGGCGGCCGGATCGGCCTGACGC	AGCGAGGCGGAAACGAAAACGCCGGGCTGATGCCCGGCGTTT	42	TTerm_0016