##gff-version  3
# Sequence Data: seqnum=1;seqlen=54600;seqhdr="t3SS_PAO1  (54.600 bp)"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="36|Ralstonia_solanacearum_PSI07|B|66.1|11|1";gc_cont=66.10;transl_table=11;uses_sd=1
t3SS_PAO1	Prodigal_v2.6.3	CDS	88	957	139.9	+	0	ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.670;conf=100.00;score=139.93;cscore=135.67;sscore=4.26;rscore=0.72;uscore=-1.00;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	960	3062	504.5	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.655;conf=99.99;score=505.73;cscore=498.36;sscore=7.37;rscore=-1.51;uscore=3.10;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	3168	4217	220.2	-	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.643;conf=99.99;score=221.49;cscore=205.57;sscore=15.92;rscore=8.88;uscore=1.20;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	4214	5002	194.0	-	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.668;conf=99.99;score=198.64;cscore=191.07;sscore=7.57;rscore=-3.31;uscore=1.74;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	4999	5265	80.0	-	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.659;conf=100.00;score=81.21;cscore=62.97;sscore=18.24;rscore=10.30;uscore=2.15;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	5268	5921	151.9	-	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.631;conf=100.00;score=155.45;cscore=149.61;sscore=5.84;rscore=-1.51;uscore=-0.74;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	5918	6847	130.7	-	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.704;conf=100.00;score=134.52;cscore=128.69;sscore=5.84;rscore=-1.51;uscore=-1.06;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	6844	7242	43.9	-	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.689;conf=100.00;score=43.22;cscore=40.92;sscore=2.30;rscore=-3.31;uscore=1.72;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	7941	8417	61.7	-	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.704;conf=100.00;score=63.05;cscore=48.33;sscore=14.72;rscore=8.88;uscore=-0.05;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	8414	9736	206.9	-	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.688;conf=99.99;score=206.26;cscore=203.90;sscore=2.36;rscore=-3.31;uscore=1.78;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	9927	10793	167.0	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.700;conf=100.00;score=167.01;cscore=161.34;sscore=5.67;rscore=0.27;uscore=0.86;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	10774	11052	50.8	+	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.627;conf=100.00;score=50.80;cscore=38.58;sscore=12.22;rscore=8.88;uscore=-1.21;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	11039	11410	63.0	+	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.699;conf=100.00;score=64.21;cscore=43.94;sscore=20.27;rscore=15.89;uscore=-1.36;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	11407	11772	55.9	+	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.719;conf=100.00;score=62.01;cscore=56.17;sscore=5.84;rscore=-3.31;uscore=-1.53;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	11777	12106	31.3	+	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.718;conf=99.94;score=32.54;cscore=25.74;sscore=6.80;rscore=0.72;uscore=0.31;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	12103	14223	460.0	+	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.657;conf=99.99;score=465.73;cscore=449.59;sscore=16.13;rscore=10.30;uscore=-4.40;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	14220	14654	47.1	+	0	ID=1_17;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.710;conf=100.00;score=48.38;cscore=47.53;sscore=0.85;rscore=7.30;uscore=0.39;tscore=-8.13;
t3SS_PAO1	Prodigal_v2.6.3	CDS	14682	14978	37.0	+	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.700;conf=99.98;score=37.98;cscore=33.44;sscore=4.55;rscore=-3.31;uscore=2.33;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	14988	15872	182.1	+	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.638;conf=99.99;score=183.25;cscore=170.34;sscore=12.90;rscore=8.88;uscore=-1.70;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	15881	16384	98.7	+	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.655;conf=100.00;score=99.88;cscore=83.72;sscore=16.16;rscore=8.88;uscore=1.55;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	16365	17537	191.7	+	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.660;conf=99.99;score=191.66;cscore=182.33;sscore=9.34;rscore=7.30;uscore=-2.51;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	17549	18436	182.2	+	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.671;conf=99.99;score=183.33;cscore=160.59;sscore=22.74;rscore=15.89;uscore=1.15;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	18562	18999	89.5	+	0	ID=1_23;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.621;conf=100.00;score=89.53;cscore=67.79;sscore=21.73;rscore=15.89;uscore=1.30;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	19008	19253	13.2	+	0	ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.711;conf=96.50;score=14.43;cscore=9.09;sscore=5.35;rscore=0.70;uscore=-0.95;tscore=4.41;
t3SS_PAO1	Prodigal_v2.6.3	CDS	19262	19675	33.0	+	0	ID=1_25;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.664;conf=99.96;score=34.14;cscore=23.49;sscore=10.65;rscore=8.88;uscore=-3.96;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	19973	20809	87.5	+	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.575;conf=100.00;score=86.85;cscore=88.45;sscore=-1.61;rscore=-3.31;uscore=-2.19;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	20907	21737	117.3	+	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.686;conf=100.00;score=117.34;cscore=115.42;sscore=1.92;rscore=0.72;uscore=-3.35;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	21771	22193	55.1	+	0	ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.719;conf=100.00;score=55.98;cscore=50.56;sscore=5.41;rscore=0.72;uscore=-0.77;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	22193	23995	346.1	+	0	ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.673;conf=99.99;score=352.75;cscore=346.93;sscore=5.82;rscore=-3.31;uscore=-2.02;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	23997	25295	212.8	+	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.686;conf=99.99;score=214.03;cscore=210.25;sscore=3.78;rscore=0.72;uscore=-2.74;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	25258	25461	20.9	+	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.667;conf=99.19;score=20.92;cscore=5.38;sscore=15.54;rscore=8.28;uscore=3.61;tscore=3.65;
t3SS_PAO1	Prodigal_v2.6.3	CDS	25464	25721	69.9	+	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.589;conf=100.00;score=71.13;cscore=55.47;sscore=15.65;rscore=8.88;uscore=0.98;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	25724	26071	49.6	+	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.704;conf=100.00;score=50.87;cscore=46.11;sscore=4.77;rscore=-3.31;uscore=2.28;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	26068	26499	63.0	+	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.681;conf=100.00;score=64.29;cscore=57.21;sscore=7.08;rscore=0.72;uscore=0.53;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	26499	26837	73.7	+	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.646;conf=100.00;score=75.02;cscore=57.82;sscore=17.20;rscore=8.88;uscore=2.49;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	26834	27580	145.7	+	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648;conf=100.00;score=145.74;cscore=144.25;sscore=1.49;rscore=-3.31;uscore=0.26;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	27589	28215	66.8	+	0	ID=1_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.687;conf=100.00;score=67.99;cscore=62.23;sscore=5.76;rscore=0.72;uscore=-0.69;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	28194	28838	111.5	+	0	ID=1_38;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.673;conf=100.00;score=111.46;cscore=108.96;sscore=2.50;rscore=0.72;uscore=-2.77;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	28941	31235	464.7	-	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.678;conf=99.99;score=464.74;cscore=457.46;sscore=7.29;rscore=0.72;uscore=2.02;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	31406	33463	433.7	-	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.671;conf=99.99;score=433.02;cscore=424.96;sscore=8.06;rscore=0.72;uscore=3.45;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	33816	34157	68.7	+	0	ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.635;conf=100.00;score=68.69;cscore=45.19;sscore=23.50;rscore=15.89;uscore=3.07;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	34255	34902	90.3	+	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.688;conf=100.00;score=90.34;cscore=68.31;sscore=22.03;rscore=15.89;uscore=1.60;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	35302	36714	289.5	+	0	ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662;conf=99.99;score=288.84;cscore=269.83;sscore=19.01;rscore=15.89;uscore=-0.78;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	36717	37670	203.9	+	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.672;conf=99.99;score=205.11;cscore=190.95;sscore=14.16;rscore=10.30;uscore=-1.93;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	37667	38467	159.9	+	0	ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.700;conf=100.00;score=161.16;cscore=139.42;sscore=21.74;rscore=13.97;uscore=1.93;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	38549	39280	174.5	+	0	ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.673;conf=100.00;score=174.55;cscore=165.97;sscore=8.58;rscore=7.30;uscore=-3.26;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	39288	40109	138.9	-	0	ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.702;conf=100.00;score=138.25;cscore=126.15;sscore=12.10;rscore=8.88;uscore=-0.67;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	40222	41109	162.1	+	0	ID=1_48;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.663;conf=100.00;score=162.10;cscore=168.14;sscore=-6.05;rscore=0.72;uscore=1.37;tscore=-8.13;
t3SS_PAO1	Prodigal_v2.6.3	CDS	41147	41248	5.3	-	0	ID=1_49;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.529;conf=74.33;score=4.62;cscore=2.39;sscore=2.24;rscore=0.29;uscore=0.80;tscore=1.80;
t3SS_PAO1	Prodigal_v2.6.3	CDS	41680	42885	255.2	+	0	ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.674;conf=99.99;score=255.23;cscore=249.94;sscore=5.28;rscore=0.72;uscore=0.02;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	42899	45043	470.6	+	0	ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.660;conf=99.99;score=471.68;cscore=459.31;sscore=12.37;rscore=8.88;uscore=-2.18;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	45295	46209	118.4	-	0	ID=1_52;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.672;conf=100.00;score=117.76;cscore=115.88;sscore=1.88;rscore=-3.31;uscore=1.30;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	46361	47332	135.5	+	0	ID=1_53;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.682;conf=100.00;score=135.52;cscore=120.79;sscore=14.72;rscore=8.88;uscore=1.30;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	47355	48353	131.7	+	0	ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.711;conf=100.00;score=132.69;cscore=119.60;sscore=13.09;rscore=8.88;uscore=-1.37;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	48362	48733	70.6	-	0	ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.642;conf=100.00;score=69.96;cscore=55.43;sscore=14.53;rscore=8.88;uscore=1.75;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	48978	49700	152.9	+	0	ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.647;conf=100.00;score=152.91;cscore=145.36;sscore=7.55;rscore=0.72;uscore=2.29;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	49758	49997	26.9	-	0	ID=1_57;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.671;conf=99.83;score=27.84;cscore=21.90;sscore=5.94;rscore=0.68;uscore=-0.03;tscore=4.31;
t3SS_PAO1	Prodigal_v2.6.3	CDS	50025	50243	24.9	-	0	ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.667;conf=99.67;score=24.86;cscore=19.19;sscore=5.67;rscore=0.62;uscore=1.13;tscore=3.92;
t3SS_PAO1	Prodigal_v2.6.3	CDS	50398	50886	87.4	-	0	ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.671;conf=100.00;score=86.74;cscore=72.14;sscore=14.60;rscore=7.30;uscore=3.41;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	51107	51613	89.2	+	0	ID=1_60;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.677;conf=100.00;score=89.22;cscore=75.10;sscore=14.12;rscore=7.30;uscore=2.28;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	51685	51873	33.8	-	0	ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.619;conf=99.96;score=33.75;cscore=19.87;sscore=13.88;rscore=7.66;uscore=2.84;tscore=3.38;
t3SS_PAO1	Prodigal_v2.6.3	CDS	52023	52712	153.3	-	0	ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.646;conf=100.00;score=152.67;cscore=137.33;sscore=15.34;rscore=7.30;uscore=4.16;tscore=4.54;
t3SS_PAO1	Prodigal_v2.6.3	CDS	53097	53381	38.9	+	0	ID=1_63;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.628;conf=99.99;score=38.90;cscore=32.37;sscore=6.53;rscore=15.89;uscore=-1.23;tscore=-8.13;
t3SS_PAO1	Prodigal_v2.6.3	CDS	53439	54515	216.9	-	0	ID=1_64;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.630;conf=99.99;score=216.93;cscore=213.70;sscore=3.23;rscore=0.72;uscore=-2.04;tscore=4.54;