##gff-version 3 # Sequence Data: seqnum=1;seqlen=14039;seqhdr="area of low expression in fim-ON 11899 strain (14,039 bp)" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1 area Prodigal_v2.6.3 CDS 66 416 13.7 - 0 ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.427;conf=95.25;score=13.04;cscore=5.97;sscore=7.08;rscore=2.79;uscore=0.99;tscore=3.95; area Prodigal_v2.6.3 CDS 659 895 7.7 + 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.557;conf=85.54;score=7.73;cscore=0.21;sscore=7.52;rscore=2.61;uscore=1.21;tscore=3.70; area Prodigal_v2.6.3 CDS 913 1530 51.9 + 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.587;conf=100.00;score=52.94;cscore=60.40;sscore=-7.46;rscore=-8.50;uscore=-3.99;tscore=3.95; area Prodigal_v2.6.3 CDS 1733 3151 143.6 + 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.542;conf=100.00;score=142.94;cscore=148.20;sscore=-5.25;rscore=-8.50;uscore=-0.05;tscore=3.95; area Prodigal_v2.6.3 CDS 3169 5553 271.0 + 0 ID=1_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520;conf=99.99;score=272.10;cscore=261.98;sscore=10.12;rscore=2.79;uscore=2.29;tscore=3.95; area Prodigal_v2.6.3 CDS 5550 6455 65.9 + 0 ID=1_6;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541;conf=100.00;score=67.59;cscore=61.74;sscore=5.85;rscore=11.19;uscore=-0.40;tscore=-6.63; area Prodigal_v2.6.3 CDS 6452 7522 103.5 + 0 ID=1_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.544;conf=100.00;score=104.84;cscore=94.19;sscore=10.65;rscore=3.78;uscore=1.62;tscore=3.95; area Prodigal_v2.6.3 CDS 7862 8680 99.7 + 0 ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546;conf=100.00;score=99.02;cscore=77.86;sscore=21.16;rscore=14.84;uscore=3.03;tscore=3.95; area Prodigal_v2.6.3 CDS 8771 9256 53.1 + 0 ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.551;conf=100.00;score=53.10;cscore=35.08;sscore=18.02;rscore=10.71;uscore=3.36;tscore=3.95; area Prodigal_v2.6.3 CDS 9272 9748 70.3 + 0 ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.589;conf=100.00;score=71.36;cscore=53.13;sscore=18.24;rscore=12.68;uscore=0.49;tscore=3.95; area Prodigal_v2.6.3 CDS 9811 10032 28.2 + 0 ID=1_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532;conf=99.85;score=28.16;cscore=13.04;sscore=15.12;rscore=9.80;uscore=1.86;tscore=3.46; area Prodigal_v2.6.3 CDS 10032 10145 -14.5 + 0 ID=1_12;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.570;conf=69.75;score=3.63;cscore=4.95;sscore=-1.31;rscore=-14.81;uscore=-2.08;tscore=1.75; area Prodigal_v2.6.3 CDS 10195 10569 25.6 + 0 ID=1_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571;conf=99.77;score=26.33;cscore=17.51;sscore=8.82;rscore=11.19;uscore=3.52;tscore=-6.63; area Prodigal_v2.6.3 CDS 10616 10990 28.9 + 0 ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520;conf=99.89;score=29.68;cscore=22.74;sscore=6.94;rscore=2.79;uscore=-0.58;tscore=3.95; area Prodigal_v2.6.3 CDS 10987 11478 56.5 + 0 ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.524;conf=100.00;score=57.77;cscore=38.68;sscore=19.09;rscore=13.08;uscore=0.76;tscore=3.95; area Prodigal_v2.6.3 CDS 11490 11687 22.1 + 0 ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.510;conf=99.53;score=23.28;cscore=12.64;sscore=10.64;rscore=8.35;uscore=-1.95;tscore=3.08; area Prodigal_v2.6.3 CDS 11772 12614 78.9 + 0 ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.485;conf=100.00;score=78.89;cscore=61.43;sscore=17.45;rscore=10.71;uscore=2.79;tscore=3.95; area Prodigal_v2.6.3 CDS 13084 14022 88.7 + 0 ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.512;conf=100.00;score=88.10;cscore=73.42;sscore=14.68;rscore=11.19;uscore=0.19;tscore=3.95;