chrom Lstart Lend Lstem Rstart Rend Rstem loop match% Indels score AT GC ATpairs GCpairs GTpairs Center Lseq Rseq intergenic tailL tailR polyTL polyTR strand TTseq FACoPscore locus_tag type start end strand_y stream seq aug_seq 3primeUTR 3primeUTRlen ID S.Typhimuirum 4859 4869 11 4877 4887 11 7 100 0 22 36 63 36 63 0 4872 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True + AAAAGGCGCCG GGGGAAG CGGCGCCTTTT GGCTTTTTC 92 CDS_0005 intergenic 4852 4908 + down CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATAT GCTGGAAGCGCATAAAGCGGTATAGCAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATATCAGGAGTCTGGCGTGCTATTGTCCT CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTT 35 TTerm_0001 S.Typhimuirum 4859 4869 11 4877 4887 11 7 100 0 22 36 63 36 63 0 4872 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True + AAAAGGCGCCG GGGGAAG CGGCGCCTTTT GGCTTTTTC 92 CDS_0006 intergenic 4852 4908 - down ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTG AGGACAATAGCACGCCAGACTCCTGATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTGCTATACCGCTTTATGCGCTTCCAGC CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTT 35 TTerm_0002 S.Typhimuirum 9368 9385 18 9391 9408 18 5 94 0 31 69 30 70 29 0 9387 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True + AAAAAAAACCGTATCACT GTAAA AGGGATACGGTTTTTTTT CGTCTTCAA 86 CDS_0010 intergenic 9118 9650 + down TTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCAT CGGAAGTTGCCTTTGGCGGGCGTAATTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCATCACTCCAGGGCATCCCACTTCTCCA TTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTT 290 TTerm_0003 S.Typhimuirum 9368 9385 18 9391 9408 18 5 94 0 31 69 30 70 29 0 9387 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True + AAAAAAAACCGTATCACT GTAAA AGGGATACGGTTTTTTTT CGTCTTCAA 86 CDS_0011 intergenic 9118 9650 - down ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGACTCGAACCCGCGACCCCCTGCGTGACAGGCAGGTATTCTAACCAACTGAACTACCGCTCCGTGATGTTCCCGCTGGGAACGAGGCGAATATTACGGTTTGCGGTGTCGCCCGTCAACGCTTTTTCTCACCTTTTGAATCAGTTGCTGCAAAAATCGCCCGAAGGATGATTTTTATAGCCTAAAAAGGAATAAA TGGAGAAGTGGGATGCCCTGGAGTGATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGACTCGAACCCGCGACCCCCTGCGTGACAGGCAGGTATTCTAACCAACTGAACTACCGCTCCGTGATGTTCCCGCTGGGAACGAGGCGAATATTACGGTTTGCGGTGTCGCCCGTCAACGCTTTTTCTCACCTTTTGAATCAGTTGCTGCAAAAATCGCCCGAAGGATGATTTTTATAGCCTAAAAAGGAATAAATTACGCCCGCCAAAGGCAACTTCCG TTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTT 290 TTerm_0004 S.Typhimuirum 22360 22368 9 22376 22384 9 7 88 0 13 27 72 25 75 0 22371 CCGGCCAGA TCTGGCTGG True CTGTTTTTC TTTTATTGT False True + CCGGCCAGA TGTTATG TCTGGCTGG TTTTATTGT 58 CDS_0021 intergenic 22348 22653 + down CGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGGTTTTATTGTTTTGATTTTAAAGGAATTTACAGTGAATAAATGGCGTAACCCCACTGGGTGGTTATGTGCGGTAGCTATGCCTTTTGCACTGCTCCTGCTTTCCGGATGCGGCAGTAGCGATTCGCTACTTGACCCCTAATCGCAGCGGCCTGGCCTGAGCGTGAAAGCGTTTTACAAGGTGAATTCTGACAATCAGAAGAAAGCGGCGTCCATGAAGATACGTGTTGAGAATTAATGACCTACACAGAATTTTTAGAGGTTAAGCAAAA CTTCAAGGCCAACAAAGAAATTTAACGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGGTTTTATTGTTTTGATTTTAAAGGAATTTACAGTGAATAAATGGCGTAACCCCACTGGGTGGTTATGTGCGGTAGCTATGCCTTTTGCACTGCTCCTGCTTTCCGGATGCGGCAGTAGCGATTCGCTACTTGACCCCTAATCGCAGCGGCCTGGCCTGAGCGTGAAAGCGTTTTACAAGGTGAATTCTGACAATCAGAAGAAAGCGGCGTCCATGAAGATACGTGTTGAGAATTAATGACCTACACAGAATTTTTAGAGGTTAAGCAAAATGAACAGACCTTCATTCAATGAAGC CGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGG 36 TTerm_0005 S.Typhimuirum 4859 4869 11 4877 4887 11 7 100 0 22 36 63 36 63 0 4872 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True - AAAAGGCGCCG CTTCCCC CGGCGCCTTTT TAAATTGCT 92 CDS_0005 intergenic 4852 4908 + down CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATAT GCTGGAAGCGCATAAAGCGGTATAGCAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATATCAGGAGTCTGGCGTGCTATTGTCCT ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTT 49 TTerm_0006 S.Typhimuirum 4859 4869 11 4877 4887 11 7 100 0 22 36 63 36 63 0 4872 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True - AAAAGGCGCCG CTTCCCC CGGCGCCTTTT TAAATTGCT 92 CDS_0006 intergenic 4852 4908 - down ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTG AGGACAATAGCACGCCAGACTCCTGATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTGCTATACCGCTTTATGCGCTTCCAGC ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTT 49 TTerm_0007 S.Typhimuirum 9368 9385 18 9391 9408 18 5 94 0 31 69 30 70 29 0 9387 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True - AAAAAAAACCGTATCCCT TTTAC AGTGATACGGTTTTTTTT TACTTCACA 86 CDS_0010 intergenic 9118 9650 + down TTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCAT CGGAAGTTGCCTTTGGCGGGCGTAATTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTGACGGGCGACACCGCAAACCGTAATATTCGCCTCGTTCCCAGCGGGAACATCACGGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCATCACTCCAGGGCATCCCACTTCTCCA ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTT 282 TTerm_0008 S.Typhimuirum 9368 9385 18 9391 9408 18 5 94 0 31 69 30 70 29 0 9387 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True - AAAAAAAACCGTATCCCT TTTAC AGTGATACGGTTTTTTTT TACTTCACA 86 CDS_0011 intergenic 9118 9650 - down ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGACTCGAACCCGCGACCCCCTGCGTGACAGGCAGGTATTCTAACCAACTGAACTACCGCTCCGTGATGTTCCCGCTGGGAACGAGGCGAATATTACGGTTTGCGGTGTCGCCCGTCAACGCTTTTTCTCACCTTTTGAATCAGTTGCTGCAAAAATCGCCCGAAGGATGATTTTTATAGCCTAAAAAGGAATAAA TGGAGAAGTGGGATGCCCTGGAGTGATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGACTCGAACCCGCGACCCCCTGCGTGACAGGCAGGTATTCTAACCAACTGAACTACCGCTCCGTGATGTTCCCGCTGGGAACGAGGCGAATATTACGGTTTGCGGTGTCGCCCGTCAACGCTTTTTCTCACCTTTTGAATCAGTTGCTGCAAAAATCGCCCGAAGGATGATTTTTATAGCCTAAAAAGGAATAAATTACGCCCGCCAAAGGCAACTTCCG ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTT 282 TTerm_0009 S.Typhimuirum 43526 43534 9 43539 43547 9 4 88 0 13 61 38 62 37 0 43536 AAATGGAAG CTGCCATTT True TCAAAAGAA GATGAAAAT True False - AAATGGCAG CATC CTTCCATTT TTCTTTTGA 58 CDS_0039 intergenic 43245 43808 + down AGCGCGAGTGCTCTTTAGCGATATAGTTGCCCATATTTAGGCGTTACTAGCCGAAGATGGCGCGATTGTCTGGCAGGGGAAACAGCAATTCTGAGGTCAGGAAGATAGCATAACCCATTAACCGGGATAGATCCGCTAGACCTGAATCCAGTTGATGCGACAGGTTATAGGGTTTATGGTTATTTGCTCCTGGAGCAAATAAACCTTATTACATTGGTATTACTAATGATATGGTTTGACGAAGGGCCGAGCATTAAAGCACTGGCAGGTTATCAAAAGAAAATGGAAGGATGCTGCCATTTGATGAAAATGTAATCTAATGGAAAGTCAGAGGTTACGAGAAATATTATATAGAGAAATATAAAACCAGAACCGGAACCATAGGTGAAAAAATTCCCTCAACAAATAGAGAGAATAAATATAATTCATTTGATCATGGGCGAACAGATCCCAGCGCACAAGCATTTAAAGACTCTTAAAATAGTAAGGGAGTTGGTTCCGGTGGAGGAAAATGCGGATGAGTGATTAAGAATTTTGGGGCTGTGATAAGAAGTCGAGAACAA TTGTTCTCGACTTCTTATCACAGCCCCAAAATTCTTAATCACTCATCCGCATTTTCCTCCACCGGAACCAACTCCCTTACTATTTTAAGAGTCTTTAAATGCTTGTGCGCTGGGATCTGTTCGCCCATGATCAAATGAATTATATTTATTCTCTCTATTTGTTGAGGGAATTTTTTCACCTATGGTTCCGGTTCTGGTTTTATATTTCTCTATATAATATTTCTCGTAACCTCTGACTTTCCATTAGATTACATTTTCATCAAATGGCAGCATCCTTCCATT 282 TTerm_0010