##gff-version  3
# Sequence Data: seqnum=1;seqlen=46881;seqhdr="S.Typhimuirum 14028S SPI6 T6SS"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1
S.Typhimuirum	Prodigal_v2.6.3	CDS	54	857	138.7	+	0	ID=1_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.510;conf=100.00;score=138.71;cscore=121.70;sscore=17.01;rscore=11.19;uscore=1.87;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	878	1792	104.6	-	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515;conf=100.00;score=103.95;cscore=81.91;sscore=22.04;rscore=14.84;uscore=3.91;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	1897	3072	167.9	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.558;conf=100.00;score=167.95;cscore=154.22;sscore=13.73;rscore=11.19;uscore=-1.41;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	3225	4004	49.0	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.538;conf=100.00;score=49.03;cscore=53.45;sscore=-4.42;rscore=-8.50;uscore=0.13;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	4082	4852	65.4	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.525;conf=100.00;score=65.40;cscore=55.88;sscore=9.51;rscore=3.78;uscore=1.78;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	4908	6128	102.5	-	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.518;conf=100.00;score=101.85;cscore=97.48;sscore=4.37;rscore=2.79;uscore=-1.72;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	6347	7102	67.7	-	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440;conf=100.00;score=67.03;cscore=50.68;sscore=16.36;rscore=11.19;uscore=1.87;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	7137	7859	55.8	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.508;conf=100.00;score=55.84;cscore=45.73;sscore=10.11;rscore=2.79;uscore=3.36;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	7856	8323	26.9	-	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.502;conf=99.76;score=26.28;cscore=16.77;sscore=9.51;rscore=4.46;uscore=1.76;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	8378	9118	75.9	+	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.510;conf=100.00;score=75.90;cscore=77.68;sscore=-1.78;rscore=-8.50;uscore=2.77;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	9650	10705	119.6	-	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.612;conf=100.00;score=120.81;cscore=112.24;sscore=8.57;rscore=2.79;uscore=0.67;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	10716	11711	100.4	-	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.600;conf=100.00;score=107.45;cscore=102.21;sscore=5.24;rscore=-2.57;uscore=-3.24;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	11708	13591	236.6	-	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.599;conf=99.99;score=237.74;cscore=227.65;sscore=10.09;rscore=2.79;uscore=2.24;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	13607	14101	50.2	-	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.566;conf=100.00;score=52.17;cscore=42.47;sscore=9.70;rscore=4.46;uscore=-0.62;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	14098	14922	89.4	-	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.598;conf=100.00;score=90.59;cscore=81.09;sscore=9.50;rscore=2.79;uscore=1.57;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	14909	15811	91.7	-	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519;conf=100.00;score=91.06;cscore=81.35;sscore=9.71;rscore=2.79;uscore=3.62;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	16179	18818	379.7	+	0	ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.595;conf=99.99;score=379.73;cscore=369.56;sscore=10.17;rscore=2.79;uscore=3.43;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	18918	19460	95.5	+	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.549;conf=100.00;score=95.55;cscore=84.62;sscore=10.93;rscore=4.46;uscore=2.52;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	19484	20977	216.4	+	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.545;conf=99.99;score=217.46;cscore=199.92;sscore=17.54;rscore=10.71;uscore=1.86;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	21163	21609	24.8	+	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.438;conf=99.61;score=24.16;cscore=7.44;sscore=16.72;rscore=10.71;uscore=2.71;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	21863	22348	86.2	+	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.537;conf=100.00;score=85.57;cscore=67.21;sscore=18.36;rscore=10.71;uscore=4.36;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	22653	23138	29.5	+	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.412;conf=99.87;score=28.88;cscore=11.18;sscore=17.70;rscore=11.19;uscore=3.22;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	23174	23506	8.7	+	0	ID=1_23;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.375;conf=90.09;score=9.60;cscore=12.35;sscore=-2.74;rscore=-8.50;uscore=0.92;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	23649	24134	69.0	+	0	ID=1_24;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.498;conf=100.00;score=68.97;cscore=52.26;sscore=16.71;rscore=10.71;uscore=2.05;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	24201	24737	48.2	+	0	ID=1_25;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.529;conf=100.00;score=48.20;cscore=41.62;sscore=6.58;rscore=10.71;uscore=2.50;tscore=-6.63;
S.Typhimuirum	Prodigal_v2.6.3	CDS	24741	26084	176.2	+	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.583;conf=100.00;score=177.42;cscore=168.42;sscore=9.01;rscore=2.79;uscore=1.02;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	26081	27385	147.8	+	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.594;conf=100.00;score=150.86;cscore=134.43;sscore=16.43;rscore=11.19;uscore=-1.81;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	27390	28163	39.3	+	0	ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.417;conf=99.99;score=40.51;cscore=25.96;sscore=14.56;rscore=11.19;uscore=-1.81;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	28441	28797	37.1	+	0	ID=1_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.305;conf=99.98;score=36.44;cscore=21.88;sscore=14.57;rscore=11.19;uscore=0.08;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	28831	32700	584.0	+	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.621;conf=99.99;score=584.90;cscore=575.75;sscore=9.16;rscore=2.79;uscore=1.50;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	32700	33488	78.2	+	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.655;conf=100.00;score=80.68;cscore=64.26;sscore=16.42;rscore=11.19;uscore=-1.21;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	33515	33901	33.1	+	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483;conf=99.96;score=34.05;cscore=17.26;sscore=16.79;rscore=11.19;uscore=0.66;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	33928	34446	40.4	+	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.474;conf=99.99;score=41.36;cscore=24.68;sscore=16.67;rscore=11.19;uscore=0.55;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	34843	37032	307.0	+	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.568;conf=99.99;score=306.37;cscore=285.21;sscore=21.16;rscore=14.84;uscore=3.03;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	37056	37502	46.6	+	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515;conf=100.00;score=47.64;cscore=29.74;sscore=17.90;rscore=11.19;uscore=1.74;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	37521	41615	428.7	+	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.605;conf=99.99;score=429.77;cscore=410.63;sscore=19.14;rscore=12.68;uscore=1.43;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	41609	41872	11.4	+	0	ID=1_37;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.269;conf=94.82;score=12.64;cscore=8.27;sscore=4.37;rscore=-1.74;uscore=0.90;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	42032	42805	39.5	+	0	ID=1_38;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530;conf=99.99;score=39.51;cscore=46.38;sscore=-6.87;rscore=2.79;uscore=-3.03;tscore=-6.63;
S.Typhimuirum	Prodigal_v2.6.3	CDS	42799	43245	28.8	+	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.298;conf=99.90;score=30.11;cscore=14.72;sscore=15.39;rscore=11.19;uscore=-1.01;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	43808	44245	12.7	+	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.320;conf=94.14;score=12.08;cscore=10.12;sscore=1.96;rscore=-2.56;uscore=1.22;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	44298	44573	13.1	-	0	ID=1_41;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529;conf=94.55;score=12.41;cscore=15.61;sscore=-3.20;rscore=-8.50;uscore=2.01;tscore=3.95;
S.Typhimuirum	Prodigal_v2.6.3	CDS	45071	45322	25.5	+	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.325;conf=99.72;score=25.54;cscore=8.75;sscore=16.79;rscore=10.67;uscore=2.19;tscore=3.93;
S.Typhimuirum	Prodigal_v2.6.3	CDS	45725	45922	9.3	+	0	ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525;conf=87.91;score=8.63;cscore=-6.08;sscore=14.71;rscore=11.57;uscore=1.21;tscore=3.08;
S.Typhimuirum	Prodigal_v2.6.3	CDS	46148	46429	3.9	+	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.447;conf=67.65;score=3.21;cscore=8.66;sscore=-5.45;rscore=-8.50;uscore=-0.25;tscore=3.95;