##gff-version 3 # Sequence Data: seqnum=1;seqlen=59238;seqhdr="pep_cluster_1 (Start (4.947.638) - End (5.006.876)) (59.238 bp)" # Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="47|Xenorhabdus_nematophila_ATCC_19061|B|44.1|11|1";gc_cont=44.20;transl_table=11;uses_sd=1 pep_cluster_1 Prodigal_v2.6.3 CDS 1 1125 97.9 - 0 ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.463;conf=100.00;score=97.22;cscore=77.98;sscore=19.24;rscore=14.77;uscore=1.13;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 1248 2279 92.4 + 0 ID=1_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522;conf=100.00;score=92.44;cscore=75.55;sscore=16.89;rscore=14.77;uscore=-1.87;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 2325 2786 51.3 + 0 ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.487;conf=100.00;score=52.06;cscore=39.34;sscore=12.73;rscore=3.02;uscore=4.93;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 2826 3911 80.5 - 0 ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.422;conf=100.00;score=79.88;cscore=71.55;sscore=8.33;rscore=5.11;uscore=-0.12;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 4153 4935 43.7 - 0 ID=1_5;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451;conf=100.00;score=44.95;cscore=43.64;sscore=1.32;rscore=12.44;uscore=0.10;tscore=-12.48; pep_cluster_1 Prodigal_v2.6.3 CDS 4928 5848 118.9 - 0 ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504;conf=100.00;score=118.86;cscore=101.28;sscore=17.59;rscore=14.77;uscore=-1.18;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 5957 6448 39.2 - 0 ID=1_7;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.465;conf=99.99;score=39.16;cscore=30.38;sscore=8.79;rscore=14.77;uscore=0.01;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 6580 7557 85.5 - 0 ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.514;conf=100.00;score=86.65;cscore=67.64;sscore=19.00;rscore=12.44;uscore=1.45;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 7572 8942 140.6 - 0 ID=1_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.497;conf=100.00;score=141.60;cscore=134.33;sscore=7.26;rscore=3.64;uscore=-1.41;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 8964 9773 52.9 - 0 ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.488;conf=100.00;score=52.86;cscore=37.29;sscore=15.58;rscore=12.44;uscore=-0.85;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 9751 10992 103.2 - 0 ID=1_11;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.494;conf=100.00;score=105.30;cscore=98.99;sscore=6.31;rscore=11.01;uscore=-0.77;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 10989 12224 111.4 - 0 ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479;conf=100.00;score=110.74;cscore=92.34;sscore=18.40;rscore=14.77;uscore=0.29;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 12810 14072 89.6 - 0 ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.508;conf=100.00;score=90.80;cscore=74.07;sscore=16.73;rscore=11.01;uscore=0.55;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 14059 15402 93.1 - 0 ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.467;conf=100.00;score=93.07;cscore=78.11;sscore=14.96;rscore=11.01;uscore=-0.03;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 15480 16469 102.1 - 0 ID=1_15;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504;conf=100.00;score=103.13;cscore=93.69;sscore=9.44;rscore=3.02;uscore=1.37;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 16490 17428 115.2 - 0 ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.470;conf=100.00;score=116.10;cscore=105.85;sscore=10.25;rscore=3.02;uscore=2.36;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 17465 18163 52.2 - 0 ID=1_17;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492;conf=100.00;score=52.19;cscore=43.19;sscore=8.99;rscore=11.01;uscore=3.98;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 18249 18863 61.8 - 0 ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.494;conf=100.00;score=62.47;cscore=47.74;sscore=14.73;rscore=12.44;uscore=-2.41;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 18916 19665 71.4 - 0 ID=1_19;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.429;conf=100.00;score=70.79;cscore=63.66;sscore=7.13;rscore=12.44;uscore=1.34;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 19993 20361 52.2 + 0 ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.461;conf=100.00;score=52.19;cscore=34.02;sscore=18.18;rscore=14.77;uscore=-0.59;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 20415 20597 7.8 - 0 ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475;conf=83.86;score=7.17;cscore=-2.94;sscore=10.10;rscore=7.92;uscore=0.46;tscore=2.87; pep_cluster_1 Prodigal_v2.6.3 CDS 20910 23207 201.0 - 0 ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.479;conf=99.99;score=201.80;cscore=185.24;sscore=16.56;rscore=11.01;uscore=0.82;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 23256 24830 140.1 - 0 ID=1_23;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.463;conf=100.00;score=139.44;cscore=139.97;sscore=-0.54;rscore=9.79;uscore=-3.68;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 25080 26456 146.0 - 0 ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.450;conf=100.00;score=145.38;cscore=138.32;sscore=7.05;rscore=3.02;uscore=0.70;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 27096 28424 147.2 - 0 ID=1_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.482;conf=100.00;score=148.37;cscore=126.43;sscore=21.94;rscore=14.77;uscore=1.96;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 28430 29530 91.7 - 0 ID=1_26;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.474;conf=100.00;score=92.64;cscore=81.37;sscore=11.27;rscore=9.79;uscore=-3.48;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 29559 30707 106.6 - 0 ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.509;conf=100.00;score=109.27;cscore=100.35;sscore=8.92;rscore=3.64;uscore=-1.40;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 30704 31891 95.1 - 0 ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.508;conf=100.00;score=96.24;cscore=77.19;sscore=19.06;rscore=14.77;uscore=-0.89;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 31878 32717 81.8 - 0 ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.469;conf=100.00;score=82.85;cscore=60.21;sscore=22.63;rscore=14.77;uscore=2.84;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 32740 34158 69.2 - 0 ID=1_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.464;conf=100.00;score=69.24;cscore=63.78;sscore=5.46;rscore=3.02;uscore=-1.55;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 34125 35576 105.0 - 0 ID=1_31;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.490;conf=100.00;score=110.35;cscore=102.61;sscore=7.74;rscore=12.44;uscore=-4.00;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 35573 36328 57.1 - 0 ID=1_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.447;conf=100.00;score=58.20;cscore=50.20;sscore=8.00;rscore=3.02;uscore=-0.08;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 36348 37748 69.4 - 0 ID=1_33;partial=00;start_type=GTG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.468;conf=100.00;score=69.41;cscore=83.31;sscore=-13.91;rscore=-5.31;uscore=-2.60;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 37696 38631 85.1 - 0 ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.507;conf=100.00;score=88.46;cscore=73.40;sscore=15.06;rscore=9.79;uscore=-2.09;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 38631 39329 62.0 - 0 ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.461;conf=100.00;score=63.09;cscore=56.80;sscore=6.29;rscore=5.11;uscore=-3.91;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 39346 40239 106.3 - 0 ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.474;conf=100.00;score=107.10;cscore=87.53;sscore=19.57;rscore=14.77;uscore=-0.03;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 40279 40917 67.3 - 0 ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.502;conf=100.00;score=68.45;cscore=54.04;sscore=14.41;rscore=11.01;uscore=-1.74;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 40901 41644 64.1 - 0 ID=1_38;partial=00;start_type=GTG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.453;conf=100.00;score=63.49;cscore=52.99;sscore=10.50;rscore=13.62;uscore=3.53;tscore=-5.99; pep_cluster_1 Prodigal_v2.6.3 CDS 41731 41895 4.4 + 0 ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.382;conf=73.54;score=4.45;cscore=1.01;sscore=3.43;rscore=1.96;uscore=-1.11;tscore=2.58; pep_cluster_1 Prodigal_v2.6.3 CDS 41926 42564 96.6 - 0 ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.479;conf=100.00;score=96.58;cscore=76.46;sscore=20.12;rscore=14.77;uscore=1.36;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 42681 44318 120.1 - 0 ID=1_41;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.447;conf=100.00;score=119.41;cscore=114.61;sscore=4.80;rscore=3.02;uscore=-1.56;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 44641 49239 549.9 - 0 ID=1_42;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504;conf=99.99;score=549.24;cscore=541.67;sscore=7.58;rscore=3.02;uscore=1.22;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 49712 50395 85.8 - 0 ID=1_43;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.494;conf=100.00;score=85.82;cscore=66.11;sscore=19.71;rscore=13.62;uscore=2.10;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 50551 51363 59.0 - 0 ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.488;conf=100.00;score=58.95;cscore=40.85;sscore=18.10;rscore=12.44;uscore=1.67;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 51465 52040 47.4 - 0 ID=1_45;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464;conf=100.00;score=46.71;cscore=26.62;sscore=20.09;rscore=14.77;uscore=1.98;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 52266 53222 114.1 + 0 ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.464;conf=100.00;score=114.10;cscore=93.39;sscore=20.71;rscore=14.77;uscore=1.95;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 53227 54213 80.7 - 0 ID=1_47;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499;conf=100.00;score=81.70;cscore=72.02;sscore=9.68;rscore=3.02;uscore=1.66;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 54238 55179 85.9 - 0 ID=1_48;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.527;conf=100.00;score=85.88;cscore=69.96;sscore=15.92;rscore=12.44;uscore=-0.51;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 55249 56664 146.1 - 0 ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.492;conf=100.00;score=145.49;cscore=129.42;sscore=16.07;rscore=11.01;uscore=1.72;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 57099 57941 88.1 - 0 ID=1_50;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.376;conf=100.00;score=87.49;cscore=86.86;sscore=0.64;rscore=-3.65;uscore=0.94;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 58077 58223 12.4 + 0 ID=1_51;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.415;conf=94.58;score=12.44;cscore=4.81;sscore=7.63;rscore=6.34;uscore=-1.01;tscore=2.30; pep_cluster_1 Prodigal_v2.6.3 CDS 58578 59141 57.8 + 0 ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.408;conf=100.00;score=57.15;cscore=49.64;sscore=7.51;rscore=3.02;uscore=1.15;tscore=3.99; pep_cluster_1 Prodigal_v2.6.3 CDS 59141 59236 4.7 + 0 ID=1_53;partial=01;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.406;conf=90.20;score=9.66;cscore=2.49;sscore=7.17;rscore=-3.65;uscore=1.89;tscore=3.99;