chrom_intergenic ID locus__tag TSS adjTSS_intergenic min10seq min10score score prediction class strand_intergenic promoterSeq start_intergenic end_intergenic chrom locus_tag_intergenic type startIntergenic endIntergenic strand stream seq aug_seq locus_tag CDS_0004 p_0003 p_0003 3120 240 CCACCCCGC 1 0.15 poor intergenic + CCACCCCGCAATGGCTAAGTGAAGCATCAGGCTATGTGCCTGCCGGCGCGATTTCGTGCGAGACTGCGCCG 169 240 phaR_locus CDS_0004 intergenic 3076 3360 - up TAGTGTCCTCGATGCGGGCGACGATGCCGACCCGGCTGAATATAGGGCGTCCGTCGCAGTATTGCGGGGCATTGTTGCCTCGCGATTTCACGGCTGTCAATCAGACGGCGTCGGACACCTGCCGCAACGCGAGCACTGGCGCGGGTTTCGAGCGGATACACCATCGCGGCCACCCCGCAATGGCTAAGTGAAGCATCAGGCTATGTGCCTGCCGGCGCGATTTCGTGCGAGACTGCGCCGTTGCGCCGGCGGCGGGCACGTCCGCCCCGCCCTGCCGCCATTCC GAAGATGCCTTGTGACGCGATGCCATAGTGTCCTCGATGCGGGCGACGATGCCGACCCGGCTGAATATAGGGCGTCCGTCGCAGTATTGCGGGGCATTGTTGCCTCGCGATTTCACGGCTGTCAATCAGACGGCGTCGGACACCTGCCGCAACGCGAGCACTGGCGCGGGTTTCGAGCGGATACACCATCGCGGCCACCCCGCAATGGCTAAGTGAAGCATCAGGCTATGTGCCTGCCGGCGCGATTTCGTGCGAGACTGCGCCGTTGCGCCGGCGGCGGGCACGTCCGCCCCGCCCTGCCGCCATTCCATGTACATCGTTGCCATCGCCTGGC p_0003 CDS_0005 p_0001 p_0001 3182 106 CCGGCGCAA 1 0.48 poor intergenic + CCGGCGCAACGGCGCAGTCTCGCACGAAATCGCGCCGGCAGGCACATAGCCTGATGCTTCACTTAGCCATT 35 106 phaR_locus CDS_0005 intergenic 3076 3360 + up GGAATGGCGGCAGGGCGGGGCGGACGTGCCCGCCGCCGGCGCAACGGCGCAGTCTCGCACGAAATCGCGCCGGCAGGCACATAGCCTGATGCTTCACTTAGCCATTGCGGGGTGGCCGCGATGGTGTATCCGCTCGAAACCCGCGCCAGTGCTCGCGTTGCGGCAGGTGTCCGACGCCGTCTGATTGACAGCCGTGAAATCGCGAGGCAACAATGCCCCGCAATACTGCGACGGACGCCCTATATTCAGCCGGGTCGGCATCGTCGCCCGCATCGAGGACACTA GCCAGGCGATGGCAACGATGTACATGGAATGGCGGCAGGGCGGGGCGGACGTGCCCGCCGCCGGCGCAACGGCGCAGTCTCGCACGAAATCGCGCCGGCAGGCACATAGCCTGATGCTTCACTTAGCCATTGCGGGGTGGCCGCGATGGTGTATCCGCTCGAAACCCGCGCCAGTGCTCGCGTTGCGGCAGGTGTCCGACGCCGTCTGATTGACAGCCGTGAAATCGCGAGGCAACAATGCCCCGCAATACTGCGACGGACGCCCTATATTCAGCCGGGTCGGCATCGTCGCCCGCATCGAGGACACTATGGCATCGCGTCACAAGGCATCTTC p_0001 CDS_0005 p_0002 p_0002 3297 221 GGCAACAAT 1 0.81 poor intergenic + GCTCGCGTTGCGGCAGGTGTCCGACGCCGTCTGATTGACAGCCGTGAAATCGCGAGGCAACAATGCCCCGC 151 222 phaR_locus CDS_0005 intergenic 3076 3360 + up GGAATGGCGGCAGGGCGGGGCGGACGTGCCCGCCGCCGGCGCAACGGCGCAGTCTCGCACGAAATCGCGCCGGCAGGCACATAGCCTGATGCTTCACTTAGCCATTGCGGGGTGGCCGCGATGGTGTATCCGCTCGAAACCCGCGCCAGTGCTCGCGTTGCGGCAGGTGTCCGACGCCGTCTGATTGACAGCCGTGAAATCGCGAGGCAACAATGCCCCGCAATACTGCGACGGACGCCCTATATTCAGCCGGGTCGGCATCGTCGCCCGCATCGAGGACACTA GCCAGGCGATGGCAACGATGTACATGGAATGGCGGCAGGGCGGGGCGGACGTGCCCGCCGCCGGCGCAACGGCGCAGTCTCGCACGAAATCGCGCCGGCAGGCACATAGCCTGATGCTTCACTTAGCCATTGCGGGGTGGCCGCGATGGTGTATCCGCTCGAAACCCGCGCCAGTGCTCGCGTTGCGGCAGGTGTCCGACGCCGTCTGATTGACAGCCGTGAAATCGCGAGGCAACAATGCCCCGCAATACTGCGACGGACGCCCTATATTCAGCCGGGTCGGCATCGTCGCCCGCATCGAGGACACTATGGCATCGCGTCACAAGGCATCTTC p_0002 CDS_0008 p_0004 p_0004 7370 92 CGATGCTGC 1 0.75 poor intergenic + CGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCG 21 92 phaR_locus CDS_0008 intergenic 7278 7661 + up CCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGA CAACGGCGGCCTGCACATGGGCTGACCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGATGGCCACCAGCAAGAAGGGCGCCGA p_0004 CDS_0008 p_0005 p_0005 7494 216 GCATAGAAT 2 1.0 poor intergenic + CGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCA 145 216 phaR_locus CDS_0008 intergenic 7278 7661 + up CCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGA CAACGGCGGCCTGCACATGGGCTGACCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGATGGCCACCAGCAAGAAGGGCGCCGA p_0005 CDS_0008 p_0006 p_0006 7656 378 GCCGCGCGT 1 0.98 poor intergenic + GCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGG 307 378 phaR_locus CDS_0008 intergenic 7278 7661 + up CCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGA CAACGGCGGCCTGCACATGGGCTGACCGCCCGCACCCATGCTGCGGCGATGCTGCAGCATGGGTGCAGCAATTTTTCCCGTTTTTTCCCTCCGGTGCTGCTCCGCTTGGATGCGCCGCAGCAGGGCAGGTGCACGCCCGCCGGTGCTGTTTTCCAAGCGCTTTCGCGTGCCGAAATGCTGCGGGTTTCTACCGGGGGAGGTCGCCTTTTCTTTACCGGGCGATCCGCATAGAATCGAATCACGGAGGCGCTCCGGAGGAGACACGGGGCGTCCGATCATAACCGGATGCCGCTGCGTTGCCGCGGTCGCACGCAGATCGGTCCAGCCGCGCGGCCGCGCGTTTTGCTGCACCGATTTCGCACTGCATTGGCTGCATCGCAGCAGCATCGCCACCATGGAAAGGCACGATGGCCACCAGCAAGAAGGGCGCCGA p_0006 CDS_0009 p_0007 p_0007 8327 112 CGGTAGAAT 1 0.47 poor intergenic + CGGTTCGCCTTTTTGTTTGGGGCGCGCATAGGGCGCCGTGCGCGGGGCGGCGGCACGGTAGAATGCGCGTC 41 112 phaR_locus CDS_0009 intergenic 8215 8446 + up TCCCGCGGCGGCAGGCCCGGCAGACAAGGCGAATCGCATGGCGGTTCGCCTTTTTGTTTGGGGCGCGCATAGGGCGCCGTGCGCGGGGCGGCGGCACGGTAGAATGCGCGTCCGCAGCGGCGGTGCATGGGCGTGGCGCCCGTTCCCGCAGATCCTTGTCTCCTCTTCACGGTTGTCACCATGTCCGACGTCAGCGTCCGGCGTCAGCGCCGGCCGGCATTCGCTTTCGCA CAACCAGCCGACCGACAAGAAGTAATCCCGCGGCGGCAGGCCCGGCAGACAAGGCGAATCGCATGGCGGTTCGCCTTTTTGTTTGGGGCGCGCATAGGGCGCCGTGCGCGGGGCGGCGGCACGGTAGAATGCGCGTCCGCAGCGGCGGTGCATGGGCGTGGCGCCCGTTCCCGCAGATCCTTGTCTCCTCTTCACGGTTGTCACCATGTCCGACGTCAGCGTCCGGCGTCAGCGCCGGCCGGCATTCGCTTTCGCATGAGCCGGCTCTTGCTCGCCCCGAT p_0007 CDS_0011 p_0008 p_0008 10940 86 ACGATCAAT 2 1.0 poor intergenic + CTCCAGCAGGCCAGGCCATTTTCGAACGATCGTTTGCTTATACTGGTTGCCATTGACGATCAATTGCCTTG 17 88 phaR_locus CDS_0011 intergenic 10854 10950 + up TCCGTCGAGGCGGGCCTCCAGCAGGCCAGGCCATTTTCGAACGATCGTTTGCTTATACTGGTTGCCATTGACGATCAATTGCCTTGGAGACAGCAA CCACGACCTGTGGGGCGAGGTCTGATCCGTCGAGGCGGGCCTCCAGCAGGCCAGGCCATTTTCGAACGATCGTTTGCTTATACTGGTTGCCATTGACGATCAATTGCCTTGGAGACAGCAATGGCACGTGAAGTGGTGGTGGTCAG p_0008