chrom ID TSS locus_tag min10seq min10score strand score class promoterSeq locus_tag_intergenic startIntergenic endIntergenic JAVTHO010000036.1 p_0001 6043 p_0001 AAATTTTAG 2 + 0.98 intergenic ACTGTGGTAATTCCCAGAAAGGGAGGCTACAAGCTTGAAGAGGAGAAGGAAATTTTAGCGGATGGGACTAG CDS_0006 5888 6094 JAVTHO010000036.1 p_0003 11096 p_0003 AGTTAAAAG 2 - 0.98 intergenic CAAAACCCAATCGTGATCGTGAGGGATGATATATGGTACAGAGAAGAGAAGTTAAAAGGAGAATAGAGATA CDS_0011 11077 11581 JAVTHO010000036.1 p_0002 11440 p_0002 ACTTATTAT 3 - 1.0 intergenic GCTCGCATCAGTCTGGGAGGTTCTTTGTAGATTCAACATGATCAAGCCATCGTAGACTTATTATGATAGTT CDS_0011 11077 11581 JAVTHO010000036.1 p_0004 27786 p_0004 TGAAATAAT 4 + 1.0 intergenic AAGAACCTGAGCGAGAAGAGAAACGAAGAAGAAAAGGTACATATGCCAGGGTGTTTGAAATAATGAATCTT CDS_0024 27598 27803 JAVTHO010000036.1 p_0005 41868 p_0005 AAAATAAAT 3 + 0.98 intergenic GGGCTTGCAGGAATAGTCAAAATCACTTTTGCCCGAAAGCTATATGGAAAGACCCAAAATAAATATGTGCC CDS_0031 41441 41900 JAVTHO010000036.1 p_0006 52723 p_0006 TGTTAAACT 2 - 1.0 intergenic CTACCACGGAACAACAATGATCCGCTTCATCAAGATTTCCTGATTGAGAATGCTCTGTTAAACTACAACTT CDS_0041 52477 53024 JAVTHO010000036.1 p_0007 90115 p_0007 TAAGATATA 3 - 0.98 intergenic CAACAGTAGTCCTTGAAGTTTTGAAAAGCATCCATTCGGGCCTCGGTTAAAACGATAAGATATAGTAATCC CDS_0063 90029 90541 JAVTHO010000036.1 p_0008 97807 p_0008 TGATAAGAT 2 + 1.0 intergenic AAAGATCAATAGTGGGAAAATCTAAAGACAGCAAACATAAATGTGGAAGGGTTCATGATAAGATTTGAGGT CDS_0071 97594 97988 JAVTHO010000036.1 p_0009 97815 p_0009 ATTTACCAT 1 - 1.0 intergenic GCGGCGTTTGAACTTGAGATGCGCATTATATATCTCTGTTTGTGTCTTGATTTTTATTTACCATCTACCTT CDS_0070 97594 97988 JAVTHO010000036.1 p_0010 106038 p_0010 AAAGTAAAA 3 - 1.0 intergenic ATTAAATTCGGCTTCGAATAGCAAAAAAATCGAATTAATCCATGGGAACAAAGTGAAAGTAAAATCCAAAG CDS_0077 105622 106137 JAVTHO010000036.1 p_0011 109137 p_0011 GTACAATAT 2 + 0.99 intergenic ATACCCTTATGGGATTCTGTACTATGTATAGATAGAATACCAAATGTGAACTGTGGTACAATATGTACAAT CDS_0081 109039 109535 JAVTHO010000036.1 p_0012 111601 p_0012 GTCTTCTCC 1 + 1.0 intergenic GTCTTCTCCGGCTTATACGTACTTTTGATCTTGATCGAAATTTCCGTTTTCCCCTCCCCACGTTGCTTGCG CDS_0083 111304 111632 JAVTHO010000036.1 p_0013 116807 p_0013 TTGTATTAT 3 - 0.6 intergenic CTTCCGTTCTTCTCTCGGCCTTTTCTCTTCTCTTCATTCTTCCCCTTTCTCTCTATTGTATTATCTATA CDS_0087 116809 117029 JAVTHO010000036.1 p_0015 127275 p_0015 TAATAATAA 3 - 1.0 intergenic TAAATAAGAAAATTCCCTCCGCGTGGCCATCTGAGAATTAAAAATAAGTCATAAGTAATAATAATAATTTA CDS_0094 127138 127468 JAVTHO010000036.1 p_0014 127288 p_0014 TATTAAATT 3 + 1.0 intergenic GGAATTAACAGTTATGCCCGACTTCCCTTTTTTGCTTTTCCCCCTGCTTATTTCGTATTAAATTATTATTA CDS_0095 127138 127468 JAVTHO010000036.1 p_0018 159826 p_0018 TGTACTTTT 2 - 0.99 intergenic AACCAGTGACCTGTTTGAAGATGGATTTGTATGTATCCACTACTTGTATATCAATTGTACTTTTGCACCAT CDS_0123 159815 160036 JAVTHO010000036.1 p_0020 187032 p_0020 AGTTATAAT 4 - 0.67 intergenic TTCCCATCCCAATTCTCGCCAAACTCCAAGTCCCTCTCCAGCGCAAACTGATCCTAGTTATAATGTTCTCA CDS_0145 187017 187482 JAVTHO010000036.1 p_0021 222618 p_0021 TGTCTATTG 2 + 0.84 intergenic AGCTCTTAATGTTTTCTGCATGTAAAGGTATTTCTGGCGTACAAAATATCACGTGTGTCTATTGTTCGATC CDS_0169 222540 222921 JAVTHO010000036.1 p_0022 224185 p_0022 TGTACTTTT 2 + 1.0 intergenic CGTGAATAGTGCTTTTTTTTGTGACCTACCGAGCAGGTCAAATTTTTCCTTCTGATGTACTTTTGAATGAA CDS_0171 224106 224551 JAVTHO010000036.1 p_0023 224335 p_0023 TATGGCCTT 1 + 1.0 intergenic TATGGCCTTGATATCTCAGTATCTGTGATCATTCAGTTAGCTTCTACATAAAAACACGACAATGACGTTTA CDS_0171 224106 224551 JAVTHO010000036.1 p_0024 236407 p_0024 GCCGATAAT 2 - 0.71 intergenic TAATCCAATTGAATTGCCTAAAACTAAGCTACCTCCTCTCATTAATGACGGAAAAGCCGATAATGTCGATC CDS_0179 236387 236485 JAVTHO010000036.1 p_0025 236817 p_0025 TATCGATAA 2 + 0.93 intergenic AGAGCTGGAAAAGTGACAGGTAAAAAAAGTCGCGCTGCGGAGGTCCACTGGTTGTTATCGATAAGCTTGTT CDS_0181 236694 237218 JAVTHO010000036.1 p_0028 267324 p_0028 CATCTTAAT 2 - 0.99 intergenic TCGGTTCTCTTTTATTACTTGCGTGTGATGCTTATTTAGGCAATTCTTCCATTGCCATCTTAATCTAAAGC CDS_0197 267278 267664 JAVTHO010000036.1 p_0027 267391 p_0027 AAGTAATAA 3 + 1.0 intergenic TACAGCTTTAGATTAAGATGGCAATGGAAGAATTGCCTAAATAAGCATCACACGCAAGTAATAAAAGAGAA CDS_0198 267278 267664 JAVTHO010000036.1 p_0029 270687 p_0029 TGTTAGAAT 2 - 1.0 intergenic TCATGGCTGCTGTTATCTGTCTGTTTGTCTATGCTTGAATGTTTCACATATACCTTGTTAGAATCCTCTTT CDS_0199 270606 270799 JAVTHO010000036.1 p_0033 333803 p_0033 CACGAAATT 2 + 1.0 intergenic TAGTTGAGATGTTCAGATTATGATGAATAAAAAATAGATAGTGAACAATGAACCACACGAAATTGTTGTTG CDS_0245 333351 333835 JAVTHO010000036.1 p_0034 334483 p_0034 GACAAAATT 3 + 0.97 intergenic GCAACCTCCGCCCGAAAACTTGTCAGACTCCTGCTTGCAGACCCTCTGATGCCACGACAAAATTGGGAAGA CDS_0246 334395 334680