chrom ID TSS locus_tag min10seq min10score strand score class promoterSeq locus_tag_intergenic startIntergenic endIntergenic pR25.0627-2_Galaxy_155k p_0001 902 p_0001 TGTTTTCAA 2 - 0.91 intergenic CTTGCCGAAAGACAGCAGGCAAGCTGGGTAAAAACACGGTCTGAACCGACATTCATGTTTTCAAAAGAACC CDS_0003 823 1097 pR25.0627-2_Galaxy_155k p_0003 1238 p_0003 TGCTACTAT 2 - 1.0 intergenic CTTTGGTGCAAACGCGTTATGTACATCAACCACCGCTGATGATTTTTGTGCGCTTTGCTACTATTCATCAC CDS_0004 1189 1364 pR25.0627-2_Galaxy_155k p_0002 1335 p_0002 TTCTTTAAT 3 + 1.0 intergenic AAATCATCAGCGGTGGTTGATGTACATAACGCGTTTGCACCAAAGGTGCTTCTTTAATGTATACTGTATAG CDS_0005 1189 1364 pR25.0627-2_Galaxy_155k p_0010 11981 p_0010 TGATTTAGT 2 - 1.0 intergenic TAACTGTCATGATTGACGAAAGCTGCATCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTT CDS_0019 11967 12069 pR25.0627-2_Galaxy_155k p_0012 12414 p_0012 TGGTATTAT 3 - 1.0 intergenic TGACAAAATCTACGTTTCTAGAATAATCGAAATATAATTCTGGTCAAGATATTTCTGGTATTATCGAAATA CDS_0020 12392 12498 pR25.0627-2_Galaxy_155k p_0011 12469 p_0011 ATTATATTT 3 + 1.0 intergenic ACCCTCTGTCTAATGATATTTCGATAATACCAGAAATATCTTGACCAGAATTATATTTCGATTATTCTAGA CDS_0021 12392 12498 pR25.0627-2_Galaxy_155k p_0013 20626 p_0013 ATCAAAATA 3 + 0.99 intergenic TAAAATAACCACCATCATTTCATAACAATACCTGCTGACTATGAAGATCTACGTCATCAAAATAGCAGTTC CDS_0028 20511 20641 pR25.0627-2_Galaxy_155k p_0014 21302 p_0014 TTTAAATCT 2 + 1.0 intergenic CCGAAAAAATGTCTATAAACCTCCCTAAATCAGTGTTTATGGATTATTCTTTAAATCTCTATGATGTTTAA CDS_0029 21186 21323 pR25.0627-2_Galaxy_155k p_0016 24787 p_0016 TATGTATAA 3 - 1.0 intergenic AATTGAGGGGTTGTAATGTGTTGATGTAACAGGCTTTTATTTTAATGTCTTGGCATATGTATAATGGTAGT CDS_0032 24759 25127 pR25.0627-2_Galaxy_155k p_0015 24887 p_0015 TGGTCAAAT 2 + 0.99 intergenic AAATAAAAGCCTGTTACATCAACACATTACAACCCCTCAATTTACCTGTTTTAAGTGGTCAAATTGGCGCG CDS_0033 24759 25127 pR25.0627-2_Galaxy_155k p_0018 28673 p_0018 AACTAATTT 3 - 1.0 intergenic CTGTTCTAATGCACTTCGCATGCCAACTTTTTAATTCATTGAAATATTTGAAAATAACTAATTTTACCTGT CDS_0038 28620 28791 pR25.0627-2_Galaxy_155k p_0017 28693 p_0017 GTAAAATTA 3 + 1.0 intergenic TGAAATTCACCATTTGTTAGTGTTATTCACCAATTTACCCTATTTATCCCGACAGGTAAAATTAGTTATTT CDS_0039 28620 28791 pR25.0627-2_Galaxy_155k p_0019 31582 p_0019 TGTTTTATG 3 - 0.98 intergenic GGGGCCGTAATTTAAGATTATTCCTTATGCAATAATTTGCTTTATGGGCTGTTTTATGGAGGATGAGAGTA CDS_0043 31492 31687 pR25.0627-2_Galaxy_155k p_0020 32853 p_0020 ACGATAATT 3 - 1.0 intergenic AGTTTTTCTTTAGGCTCTTGTTATAAATAACCGTTTGTTCTGTCCGGTGAATCTGACGATAATTGCCGCCG CDS_0044 32826 32937 pR25.0627-2_Galaxy_155k p_0021 35702 p_0021 CTTATTATT 3 + 1.0 intergenic TACACATAGAGGTATTTTTTTCTAGATTTATATCGAATTTCGTTATCGAATTTCGCTTATTATTGATCAAC CDS_0049 35573 35729 pR25.0627-2_Galaxy_155k p_0022 41488 p_0022 TGTTACATT 2 - 1.0 intergenic GGCTGCCTCATCGCTAACTTTGCAACAGTGCCGGATTGAATATAACCGACGTGACTGTTACATTTAGGTGG CDS_0054 41458 41580 pR25.0627-2_Galaxy_155k p_0023 42307 p_0023 TGATAAACT 2 - 0.99 intergenic CGGCCTGAGTTTTTTAAATGGCGGAAAATCGGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATC CDS_0055 42284 42433 pR25.0627-2_Galaxy_155k p_0024 46414 p_0024 GTTTTAAGT 2 + 1.0 intergenic TAAAACTCCTTATGGTGTTTTTTTTGGTGTGTGTTTGGGTATGTTTTGGGTTTTAAGTGGGTTTGTTTGTC CDS_0061 46340 46858 pR25.0627-2_Galaxy_155k p_0025 46451 p_0025 ACACCAAAA 2 - 1.0 intergenic TCTTTTGTTACCCGCCAAACAAAACCCAAAAACAACCCATACCCAACCCAATAAAACACCAAAACAAGACA CDS_0060 46340 46858 pR25.0627-2_Galaxy_155k p_0027 60475 p_0027 TTTTATTAA 3 + 1.0 intergenic ATTGTTGTCTTTTTGTTAACGATAACCGAGGGGGGATGATATTAAGCGAAAAAACTTTTATTAATTTTATG CDS_0080 60387 60498 pR25.0627-2_Galaxy_155k p_0032 62257 p_0032 TGTTAATTA 3 - 1.0 intergenic GATCGCCAACGACTCTCTATTTAATAATTCAGAATTATTAAATATAAATAGCGTTTGTTAATTACATGATT CDS_0081 62125 62541 pR25.0627-2_Galaxy_155k p_0028 62294 p_0028 TATTTATAT 3 + 1.0 intergenic ACGCAAAAACAAGTTTTTGCTGATTTACGTTTTAAATCATGTAATTAACAAACGCTATTTATATTTAATAA CDS_0082 62125 62541 pR25.0627-2_Galaxy_155k p_0031 62364 p_0031 ATGAAAATT 3 - 0.74 intergenic ATAAAAAAATGCGATCCGGCGCTAGGGGCGTCCCTAATATATATCAATGTTTTTCATGAAAATTGTCAGTA CDS_0081 62125 62541 pR25.0627-2_Galaxy_155k p_0030 62468 p_0030 TGTTTACAA 2 - 1.0 intergenic AGATAAAACCTTTCATTATTAAGCAATGAACTTTTCACTATAAATATGCATATAGTGTTTACAAGTAAGAA CDS_0081 62125 62541 pR25.0627-2_Galaxy_155k p_0029 62530 p_0029 TGCTTAATA 3 + 1.0 intergenic GGAGTGTCTTTCTTACTTGTAAACACTATATGCATATTTATAGTGAAAAGTTCATTGCTTAATAATGAAAG CDS_0082 62125 62541 pR25.0627-2_Galaxy_155k p_0033 62998 p_0033 TGACAATTA 3 + 1.0 intergenic AGAATTAAAAGTTGATTTACTTCAAATAACAGGATTTTGATCTGGTTCAATTTGATGACAATTAACCACAT CDS_0083 62924 63118 pR25.0627-2_Galaxy_155k p_0034 63861 p_0034 TGTAATTTA 3 + 1.0 intergenic TGATGTTTCGTTTTTGTTAAAAACAAGGTGACATTATGTCACCTTGTTTTGTTAATGTAATTTACTCTATT CDS_0084 63789 64186 pR25.0627-2_Galaxy_155k p_0035 64151 p_0035 ATAATTAAA 3 + 1.0 intergenic TCCTGACTTTTATAATCTGGATGCAATAAAGGAGGGAGCAGAGGAAACTGATTCGATAATTAAAGATCTTT CDS_0084 63789 64186 pR25.0627-2_Galaxy_155k p_0036 69239 p_0036 TGGTATTCC 2 + 0.31 intergenic CAGAACAACTGACCATGACAGGAATAAACCGGATACGCCAGGAAATAAATGTTCATGGTATTCCTGTTTAT CDS_0092 69000 69349 pR25.0627-2_Galaxy_155k p_0037 79945 p_0037 ACGCGAATA 1 + 1.0 intergenic AACGGTAATAAAAACCATACAAAATAATGAGGTTGATCTGATTAATATCACACAAACGCGAATATTACAGA CDS_0106 79865 79984 pR25.0627-2_Galaxy_155k p_0038 81008 p_0038 TGAAATATA 4 + 0.89 intergenic TTTCTGTTTCTGTTGTGTTTTTTGTGGGGGCAATTGTGGGATGGATTTCGGTGTCTGAAATATATTACAGC CDS_0108 80800 81058 pR25.0627-2_Galaxy_155k p_0042 99800 p_0042 AACTGAAAA 2 + 0.99 intergenic TGTCCAACCCCGGAAACGGGAAAAAGCAAGTTTTCCCCGCTCCCGGCGTTTCAATAACTGAAAACCATACT CDS_0122 99710 99950 pR25.0627-2_Galaxy_155k p_0043 100386 p_0043 GTACGAAAA 2 + 0.85 intergenic GATTTACAGGAGCCAGAAAAGCAAAAACCCCGATAATCTTCTTCAACTTTGGCGAGTACGAAAAGATTACC CDS_0123 100204 100509 pR25.0627-2_Galaxy_155k p_0044 103030 p_0044 TGTTATATT 3 + 1.0 intergenic AGTTATATTTTTATTAAACATTGTGCGTTAAAGCCTGGTGTGTTTTTTTAGTGGATGTTATATTTAAATAT CDS_0125 102958 103051 pR25.0627-2_Galaxy_155k p_0045 103774 p_0045 TGGTTTATT 3 + 0.98 intergenic GTCCCACCATTCTGGTGATTCCCAAACGTTATTTGGCTAAAAAGTAGTTTTGATGTGGTTTATTTTCCGAA CDS_0127 103642 103891 pR25.0627-2_Galaxy_155k p_0046 103870 p_0046 TGATTTAGT 2 + 1.0 intergenic TGCGTATTTGCGTGTTTTGCGCAGTTTTGAAGTTCCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT CDS_0127 103642 103891 pR25.0627-2_Galaxy_155k p_0050 108613 p_0050 TGATAAACT 2 - 1.0 intergenic GTATTTTCACGGAAAAGCTAGCAGCCAATTTGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATC CDS_0133 108590 108933 pR25.0627-2_Galaxy_155k p_0047 108691 p_0047 TGAAAATAC 3 + 1.0 intergenic AGTTTATCACCACCGACTATTTGCAACAGTGCCAAATTGGCTGCTAGCTTTTCCGTGAAAATACTCTTGCT CDS_0134 108590 108933 pR25.0627-2_Galaxy_155k p_0049 108697 p_0049 TGATATAAT 5 - 1.0 intergenic CTAACAATAAGCTGCTTATTGATGTATCAGTAAGCATGCCGGCAGCCATTGCGCTTGATATAATACTACCC CDS_0133 108590 108933 pR25.0627-2_Galaxy_155k p_0048 108898 p_0048 GGAAGACTG 1 + 0.9 intergenic GGAAGACTGGTTGAAAGAGCCAGGAATATTTCCAATAACCCATTAAGTCAATCCCTCTACACTGGGCGCAC CDS_0134 108590 108933 pR25.0627-2_Galaxy_155k p_0053 117587 p_0053 TGCCTTTAA 2 - 0.99 intergenic AGCATTTTTTAATCGATACTGATAAGTAACTGATTGATTTATCGTAATCAGCTATTGCCTTTAAGTTATTG CDS_0142 117425 117847 pR25.0627-2_Galaxy_155k p_0052 117629 p_0052 ACGATAAAT 3 + 1.0 intergenic GAGATAAGCTAAATGCGATAAGAGAAAAGCAATAACTTAAAGGCAATAGCTGATTACGATAAATCAATCAG CDS_0143 117425 117847 pR25.0627-2_Galaxy_155k p_0054 120778 p_0054 CTTAGAATT 2 - 0.78 intergenic AAACTGTTATGGTTAAATATGTCTGTTCTGTTTCTGCCCCTCATTGCCTCACACGCTTAGAATTGCGCTGA CDS_0146 120753 120877 pR25.0627-2_Galaxy_155k p_0055 136162 p_0055 TGTATGATG 2 - 0.99 intergenic AACAACTCAACTATCAGCTTACACACCTGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT CDS_0164 136150 136335 pR25.0627-2_Galaxy_155k p_0057 142204 p_0057 AAAAAAATA 3 - 1.0 intergenic CAAGGTGAAATCGCCACGATTTCACCTTGGATTTTACCTTCCACCCCTACTCCCGAAAAAAATAAAAAAAT CDS_0169 142112 142338 pR25.0627-2_Galaxy_155k p_0058 144557 p_0058 CAGCATAAA 2 - 1.0 intergenic GCATCTACGCATACATTATTATTTTATGCAGCATTTTTAATTAAATTCAAAAATACAGCATAAAGGATGAC CDS_0171 144552 144721 pR25.0627-2_Galaxy_155k p_0059 145623 p_0059 GTCAACGTT 1 - 0.94 intergenic GTCAACGTTTCTCCCGACAATATCTTACATAGTCGATCTTTGGTGGAGTTAAATCGACTACAGTCAACTTT CDS_0172 145530 145823 pR25.0627-2_Galaxy_155k p_0061 147841 p_0061 AGTCAATAA 2 - 0.89 intergenic AAGCAAGCCATGGAGAAAATTGGCAGTCTTGATCAGGCTGTTAAGGAACGTGATAAGTCAATAATGGATCT CDS_0175 147779 148075 pR25.0627-2_Galaxy_155k p_0060 147988 p_0060 TGTCTTTGA 1 - 1.0 intergenic ATAATTTTTCTTCAGGAGGAAGACATGTCATTCTTTTCTACGTTAAAAACAGCTTTGTCTTTGAAGGAGTA CDS_0175 147779 148075 pR25.0627-2_Galaxy_155k p_0064 150366 p_0064 TGTATGATG 2 - 0.62 intergenic CGAACCAGGTTCCACAACATCGGCCTTGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT CDS_0179 150354 150669 pR25.0627-2_Galaxy_155k p_0063 150550 p_0063 CTCAAAAAA 3 - 1.0 intergenic CACGTTTTAAAAATATTGAATTATTAGAGCAATATTATCCTGATTCTTGCTCAAAAAACGCGCTAATGAGA CDS_0179 150354 150669 pR25.0627-2_Galaxy_155k p_0062 150598 p_0062 GATAATATT 3 + 1.0 intergenic GAAGTGTCAGAGGATTGGCTTCCTCTCATTAGCGCGTTTTTTGAGCAAGAATCAGGATAATATTGCTCTAA CDS_0180 150354 150669 pR25.0627-2_Galaxy_155k p_0065 152801 p_0065 TTGCTCTAA 1 + 1.0 intergenic TTGCTCTAATAAATATTGATTTTTAAAACAGAGAAAGTGAAAATAAAAACATGCCGCAAGGCGCGGCATGT CDS_0183 152730 152925