##gff-version  3
# Sequence Data: seqnum=1;seqlen=6238;seqhdr="relA base"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1
relA	Prodigal_v2.6.3	CDS	3	461	57.8	-	0	ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.545;conf=100.00;score=57.11;cscore=53.15;sscore=3.96;rscore=2.79;uscore=-2.13;tscore=3.95;
relA	Prodigal_v2.6.3	CDS	575	1879	137.4	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.606;conf=100.00;score=137.37;cscore=138.68;sscore=-1.31;rscore=-6.58;uscore=1.32;tscore=3.95;
relA	Prodigal_v2.6.3	CDS	2001	4238	356.9	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.595;conf=99.99;score=356.93;cscore=341.85;sscore=15.08;rscore=14.84;uscore=-3.71;tscore=3.95;
relA	Prodigal_v2.6.3	CDS	4350	5141	145.4	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.576;conf=100.00;score=145.39;cscore=128.22;sscore=17.17;rscore=10.71;uscore=2.51;tscore=3.95;
relA	Prodigal_v2.6.3	CDS	5422	6237	133.2	+	0	ID=1_5;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.549;conf=100.00;score=132.56;cscore=127.38;sscore=5.17;rscore=2.79;uscore=-0.92;tscore=3.95;
chrom	db	type	start	end	name	strand	score	description
CDS_0005	ProPr	promoter	0.0	71.0	prom_0002	+	1.0	ID=p_0002;locus_tag=p_0002;TSS=71.0;class=intergenic;min10seq=CTTGATTTA;min10score=2;min10class=weak;promseq=
CDS_0004	ProPr	promoter	14.0	85.0	prom_0001	+	1.0	ID=p_0001;locus_tag=p_0001;TSS=85.0;class=intergenic;min10seq=GGATAAGGC;min10score=1;min10class=weak;promseq=GGATAAGGCGAAGCCGCCATCCGGCAATTTCGCAACGTCGGATAAGGTCTAAACGCCTTATCCGGCCGACT
CDS_0005	ProPr	promoter	164.0	235.0	prom_0003	+	1.0	ID=p_0003;locus_tag=p_0003;TSS=235.0;class=intergenic;min10seq=GGTATACTA;min10score=2;min10class=weak;promseq=CTTGAAGAACGAAGGGGAGGGGAAGAATGAAAGTTTGTGGCGTCACGCATGTTCGGGTATACTACTTTCCC
relA	ProPr	promoter	4252	4323	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=4323;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=GGATAAGGCGAAGCCGCCATCCGGCAATTTCGCAACGTCGGATAAGGTCTAAACGCCTTATCCGGCCGACT
relA	ProPr	promoter	5306	5377	1.0	+	.	ID=p_0003;locus_tag=p_0003;TSS=5377;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=CTTGAAGAACGAAGGGGAGGGGAAGAATGAAAGTTTGTGGCGTCACGCATGTTCGGGTATACTACTTTCCC
relA	ProPr	gene	3	461	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_1;
relA	ProPr	gene	575	1879	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=3Base/5BMM;conf=100.00;prodigalID=1_2;
relA	ProPr	gene	2001	4238	CDS_0003	+	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=AGGAG;conf=99.99;prodigalID=1_3;
relA	ProPr	gene	4350	5141	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGA;conf=100.00;prodigalID=1_4;
relA	ProPr	gene	5422	6237	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_5;
relA	ProPr	promoter	4252	4323	1.0	+	.	ID=p_0001;locus_tag=p_0001;TSS=4323;Downstream_locus_tag=p_0001;class=intergenic;promoterSeq=GGATAAGGCGAAGCCGCCATCCGGCAATTTCGCAACGTCGGATAAGGTCTAAACGCCTTATCCGGCCGACT
relA	ProPr	promoter	5306	5377	1.0	+	.	ID=p_0003;locus_tag=p_0003;TSS=5377;Downstream_locus_tag=p_0003;class=intergenic;promoterSeq=CTTGAAGAACGAAGGGGAGGGGAAGAATGAAAGTTTGTGGCGTCACGCATGTTCGGGTATACTACTTTCCC
relA	ProPr	gene	3	461	CDS_0001	-	100.00	ID=CDS_0001;locus_tag=CDS_0001;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_1;
relA	ProPr	gene	575	1879	CDS_0002	+	100.00	ID=CDS_0002;locus_tag=CDS_0002;RBS=3Base/5BMM;conf=100.00;prodigalID=1_2;
relA	ProPr	gene	2001	4238	CDS_0003	+	99.99	ID=CDS_0003;locus_tag=CDS_0003;RBS=AGGAG;conf=99.99;prodigalID=1_3;
relA	ProPr	gene	4350	5141	CDS_0004	+	100.00	ID=CDS_0004;locus_tag=CDS_0004;RBS=AGGA;conf=100.00;prodigalID=1_4;
relA	ProPr	gene	5422	6237	CDS_0005	+	100.00	ID=CDS_0005;locus_tag=CDS_0005;RBS=GGA/GAG/AGG;conf=100.00;prodigalID=1_5;