##gff-version  3
# Sequence Data: seqnum=1;seqlen=40235;seqhdr="chromosome00001 len=40235"
# Model Data: version=Prodigal.v2.6.3;run_type=Metagenomic;model="20|Escherichia_coli_UMN026|B|50.7|11|1";gc_cont=50.70;transl_table=11;uses_sd=1
chromosome00001	Prodigal_v2.6.3	CDS	1	1515	147.5	+	0	ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.556;conf=100.00;score=147.51;cscore=144.29;sscore=3.22;rscore=0.00;uscore=0.00;tscore=3.22;
chromosome00001	Prodigal_v2.6.3	CDS	1515	2789	113.0	+	0	ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.548;conf=100.00;score=114.27;cscore=105.40;sscore=8.88;rscore=2.79;uscore=0.85;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	2807	3484	58.9	+	0	ID=1_3;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.529;conf=100.00;score=59.98;cscore=58.29;sscore=1.69;rscore=-2.57;uscore=-0.78;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	3487	4644	184.6	+	0	ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.570;conf=99.99;score=185.80;cscore=166.77;sscore=19.03;rscore=10.71;uscore=3.12;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	4679	5005	16.3	+	0	ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.532;conf=98.12;score=17.21;cscore=24.94;sscore=-7.73;rscore=-8.50;uscore=-4.09;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	5005	5343	25.9	+	0	ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.546;conf=99.85;score=28.27;cscore=8.20;sscore=20.07;rscore=14.84;uscore=-1.04;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	5340	5789	62.8	+	0	ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564;conf=100.00;score=64.10;cscore=43.11;sscore=20.99;rscore=14.84;uscore=0.91;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	5786	6133	38.3	+	0	ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.543;conf=99.99;score=40.37;cscore=23.94;sscore=16.43;rscore=11.19;uscore=-0.77;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	6186	6656	57.1	+	0	ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.577;conf=100.00;score=57.84;cscore=42.44;sscore=15.40;rscore=11.19;uscore=-0.44;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	6709	7110	45.0	+	0	ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535;conf=100.00;score=45.70;cscore=37.41;sscore=8.28;rscore=2.79;uscore=0.84;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	7134	7397	19.4	+	0	ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.561;conf=99.09;score=20.40;cscore=27.46;sscore=-7.07;rscore=-8.50;uscore=-3.54;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	7513	10713	362.1	+	0	ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.588;conf=99.99;score=362.09;cscore=357.39;sscore=4.69;rscore=2.79;uscore=-2.05;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	10713	11051	27.3	+	0	ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.519;conf=99.90;score=29.93;cscore=9.86;sscore=20.07;rscore=14.84;uscore=-1.35;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	11048	11803	60.4	+	0	ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.519;conf=100.00;score=61.69;cscore=50.72;sscore=10.97;rscore=2.79;uscore=2.94;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	11805	12515	72.2	+	0	ID=1_15;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.570;conf=100.00;score=73.48;cscore=54.23;sscore=19.26;rscore=14.84;uscore=-0.79;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	12546	12971	12.1	+	0	ID=1_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.441;conf=95.26;score=13.05;cscore=2.18;sscore=10.87;rscore=2.79;uscore=3.18;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	13011	13616	45.3	+	0	ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515;conf=100.00;score=46.18;cscore=28.61;sscore=17.57;rscore=11.19;uscore=1.58;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	13670	17110	417.6	+	0	ID=1_18;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.579;conf=99.99;score=418.26;cscore=422.58;sscore=-4.31;rscore=-8.50;uscore=-0.46;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	17110	17406	1.8	+	0	ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525;conf=94.54;score=12.40;cscore=7.17;sscore=5.23;rscore=-8.50;uscore=-0.85;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	17403	18044	34.3	+	0	ID=1_20;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.547;conf=99.99;score=39.42;cscore=34.18;sscore=5.24;rscore=-2.34;uscore=-1.53;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	18009	18371	35.5	-	0	ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.441;conf=99.97;score=34.83;cscore=18.42;sscore=16.41;rscore=10.71;uscore=2.40;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	18498	19820	104.3	+	0	ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534;conf=100.00;score=104.26;cscore=84.85;sscore=19.41;rscore=11.19;uscore=4.27;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	19817	20596	67.6	-	0	ID=1_23;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.523;conf=100.00;score=67.64;cscore=61.33;sscore=6.31;rscore=12.68;uscore=0.25;tscore=-6.63;
chromosome00001	Prodigal_v2.6.3	CDS	20656	20973	4.0	-	0	ID=1_24;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.484;conf=68.37;score=3.35;cscore=12.88;sscore=-9.52;rscore=-1.74;uscore=-0.50;tscore=-6.63;
chromosome00001	Prodigal_v2.6.3	CDS	21350	21904	7.4	+	0	ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.458;conf=84.46;score=7.37;cscore=7.74;sscore=-0.37;rscore=-8.50;uscore=4.18;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	21945	22208	26.6	-	0	ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485;conf=99.74;score=25.93;cscore=8.78;sscore=17.14;rscore=11.19;uscore=2.66;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	22549	23559	63.8	-	0	ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.493;conf=100.00;score=65.09;cscore=47.44;sscore=17.66;rscore=11.19;uscore=1.24;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	23559	23786	14.6	-	0	ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.461;conf=97.08;score=15.25;cscore=1.33;sscore=13.91;rscore=10.07;uscore=-0.41;tscore=3.55;
chromosome00001	Prodigal_v2.6.3	CDS	23840	24223	11.3	-	0	ID=1_29;partial=00;start_type=TTG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.487;conf=93.00;score=11.25;cscore=24.39;sscore=-13.14;rscore=-2.57;uscore=2.92;tscore=-13.49;
chromosome00001	Prodigal_v2.6.3	CDS	24323	25072	76.1	-	0	ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.525;conf=100.00;score=75.45;cscore=59.79;sscore=15.66;rscore=10.71;uscore=1.66;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	25262	25516	23.6	-	0	ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518;conf=99.67;score=24.83;cscore=7.98;sscore=16.85;rscore=12.68;uscore=-1.04;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	25509	25874	37.6	-	0	ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.454;conf=99.99;score=38.88;cscore=25.35;sscore=13.53;rscore=11.19;uscore=-2.88;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	25875	26099	24.4	-	0	ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440;conf=99.57;score=23.71;cscore=8.16;sscore=15.55;rscore=9.94;uscore=2.76;tscore=3.51;
chromosome00001	Prodigal_v2.6.3	CDS	26282	26476	7.1	-	0	ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.513;conf=87.23;score=8.36;cscore=-1.70;sscore=10.06;rscore=8.23;uscore=-1.92;tscore=3.03;
chromosome00001	Prodigal_v2.6.3	CDS	26466	26774	33.6	-	0	ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.379;conf=99.96;score=33.55;cscore=16.91;sscore=16.64;rscore=11.19;uscore=1.50;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	26946	27647	41.4	-	0	ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464;conf=99.99;score=40.73;cscore=25.45;sscore=15.29;rscore=11.19;uscore=0.80;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	27772	27906	2.9	+	0	ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.511;conf=66.29;score=2.94;cscore=-4.00;sscore=6.94;rscore=3.05;uscore=2.30;tscore=2.09;
chromosome00001	Prodigal_v2.6.3	CDS	28720	30339	152.9	+	0	ID=1_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.563;conf=100.00;score=152.23;cscore=150.10;sscore=2.13;rscore=-2.57;uscore=1.40;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	30336	31310	82.7	+	0	ID=1_39;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515;conf=100.00;score=84.19;cscore=76.15;sscore=8.04;rscore=2.79;uscore=-0.20;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	31310	32170	92.6	+	0	ID=1_40;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.512;conf=100.00;score=93.84;cscore=80.57;sscore=13.27;rscore=3.78;uscore=4.26;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	32167	32970	70.2	+	0	ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.555;conf=100.00;score=71.53;cscore=53.84;sscore=17.69;rscore=11.19;uscore=1.26;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	33222	33647	61.4	+	0	ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.519;conf=100.00;score=60.76;cscore=47.84;sscore=12.93;rscore=10.71;uscore=-1.08;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	33647	33799	1.1	+	0	ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.542;conf=88.57;score=8.91;cscore=5.25;sscore=3.65;rscore=-2.90;uscore=-3.59;tscore=2.37;
chromosome00001	Prodigal_v2.6.3	CDS	33907	34293	45.0	+	0	ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568;conf=100.00;score=44.99;cscore=29.75;sscore=15.25;rscore=11.19;uscore=0.11;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	34280	34561	13.5	+	0	ID=1_45;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.560;conf=96.70;score=14.69;cscore=10.13;sscore=4.56;rscore=12.68;uscore=-2.68;tscore=-6.63;
chromosome00001	Prodigal_v2.6.3	CDS	34561	35190	77.8	+	0	ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.575;conf=100.00;score=79.13;cscore=62.71;sscore=16.42;rscore=11.19;uscore=-0.09;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	35198	35473	33.9	+	0	ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547;conf=99.97;score=35.10;cscore=17.86;sscore=17.23;rscore=11.19;uscore=0.90;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	35614	35856	22.4	+	0	ID=1_48;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.465;conf=99.42;score=22.38;cscore=19.80;sscore=2.58;rscore=10.74;uscore=-1.26;tscore=-6.91;
chromosome00001	Prodigal_v2.6.3	CDS	35950	36063	0.3	+	0	ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491;conf=51.73;score=0.30;cscore=-6.46;sscore=6.76;rscore=4.97;uscore=0.54;tscore=1.75;
chromosome00001	Prodigal_v2.6.3	CDS	36192	36365	10.7	+	0	ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.460;conf=92.05;score=10.65;cscore=4.61;sscore=6.04;rscore=7.33;uscore=-3.98;tscore=2.70;
chromosome00001	Prodigal_v2.6.3	CDS	36378	37013	59.3	+	0	ID=1_51;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.527;conf=100.00;score=60.47;cscore=45.28;sscore=15.18;rscore=10.71;uscore=-0.62;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	37023	38480	131.0	+	0	ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.560;conf=100.00;score=132.22;cscore=125.61;sscore=6.61;rscore=2.79;uscore=-1.31;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	38462	39052	36.3	+	0	ID=1_53;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=3-4bp;gc_cont=0.557;conf=99.98;score=36.26;cscore=17.62;sscore=18.64;rscore=15.33;uscore=-0.63;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	39049	39390	20.4	+	0	ID=1_54;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.561;conf=99.77;score=26.33;cscore=8.40;sscore=17.93;rscore=12.68;uscore=-4.64;tscore=3.95;
chromosome00001	Prodigal_v2.6.3	CDS	39390	39584	28.5	+	0	ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.513;conf=99.94;score=32.13;cscore=19.22;sscore=12.91;rscore=8.59;uscore=-2.32;tscore=3.03;
chromosome00001	Prodigal_v2.6.3	CDS	39744	40229	47.4	+	0	ID=1_56;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.547;conf=100.00;score=47.43;cscore=38.03;sscore=9.40;rscore=2.79;uscore=2.66;tscore=3.95;