chrom Lstart Lend Lstem Rstart Rend Rstem loop match% Indels score AT GC ATpairs GCpairs GTpairs Center Lseq Rseq intergenic tailL tailR polyTL polyTR strand TTseq FACoPscore locus_tag type start end strand_y stream seq aug_seq 3primeUTR 3primeUTRlen ID NC_003197.2 274 287 14 295 308 14 7 100 0 28 50 50 50 50 0 290 AAAAAAGCCCGCAC GTGCGGGCTTTTTT True AAACACAGA TTCGACCAG True True + AAAAAAGCCCGCAC CTGAACA GTGCGGGCTTTTTT TTCGACCAG 96 STM0001 intergenic 255 325 + down CGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGGGCTTTTTTTTCGACCAGAGATCACG TACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGGGCTTTTTTTTCGACCAGAGATCACGAGGTAACAACCATGCGAGTGTTGAA CGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGGGCTTTTTT 53 TTerm_0001 NC_003197.2 14759 14765 7 14774 14780 7 8 100 0 14 14 85 14 85 0 14769 AGCCCGG CCGGGCT True TTTTCTTCA TTTTTCTGC False True + AGCCCGG GTGTATAT CCGGGCT TTTTTCTGC 76 STM0013 intergenic 14734 15007 + down TCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCATCGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAGCAGTTTTGTATACGCTTATTCTTTAAAAAAACGTGATGTGATGACATTAATGATTGCTTTTTTAGATGCTGTGAATTGATTTATCTTGAGTATTATCTATATTGCTTTTTTTAGTTTCCGGAGGCAGA ATTCTTTGACGATTTGACTCGCTAATCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCATCGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAGCAGTTTTGTATACGCTTATTCTTTAAAAAAACGTGATGTGATGACATTAATGATTGCTTTTTTAGATGCTGTGAATTGATTTATCTTGAGTATTATCTATATTGCTTTTTTTAGTTTCCGGAGGCAGACAGCGAATGGGATCGAAAGGTGCCA TCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCT 46 TTerm_0002 NC_003197.2 14854 14863 10 14870 14879 10 6 90 0 15 70 30 66 33 0 14866 CTGATAAACA TGTTAATCAG True TGTTTTTAC CAGTTTTGT False True + CTGATAAACA AATTGA TGTTAATCAG CAGTTTTGT 38 STM0013 intergenic 14734 15007 + down TCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCATCGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAGCAGTTTTGTATACGCTTATTCTTTAAAAAAACGTGATGTGATGACATTAATGATTGCTTTTTTAGATGCTGTGAATTGATTTATCTTGAGTATTATCTATATTGCTTTTTTTAGTTTCCGGAGGCAGA ATTCTTTGACGATTTGACTCGCTAATCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCATCGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAGCAGTTTTGTATACGCTTATTCTTTAAAAAAACGTGATGTGATGACATTAATGATTGCTTTTTTAGATGCTGTGAATTGATTTATCTTGAGTATTATCTATATTGCTTTTTTTAGTTTCCGGAGGCAGACAGCGAATGGGATCGAAAGGTGCCA TCTTTTCCCGTTGTATTTTTCTTCAGCCCGGGTGTATATCCGGGCTTTTTTCTGCCTGTACGCGCCCAGGCTTCTGTTAAACGCATCGTATCCTCTCATTTGTTGATATTTTGTTTTTACTGATAAACAAATTGATGTTAATCAG 145 TTerm_0003 NC_003197.2 16450 16456 7 16461 16467 7 4 100 0 14 42 57 42 57 0 16458 AGGCTCA TGAGCCT True GCAGTATCA TTTACGCGT False True + AGGCTCA TCCG TGAGCCT TTTACGCGT 60 STM0015 intergenic 16432 16493 + down TTATCATTTGCAGTATCAGGCTCATCCGTGAGCCTTTTACGCGTCTTTTTTCAGCCTGGTC TATCGAAGGTAATAATTCAGATTAATTATCATTTGCAGTATCAGGCTCATCCGTGAGCCTTTTACGCGTCTTTTTTCAGCCTGGTCTAGGTCACTCTATTCTTGATCCAGC TTATCATTTGCAGTATCAGGCTCATCCGTGAGCCT 35 TTerm_0004 NC_003197.2 16450 16456 7 16461 16467 7 4 100 0 14 42 57 42 57 0 16458 AGGCTCA TGAGCCT True GCAGTATCA TTTACGCGT False True + AGGCTCA TCCG TGAGCCT TTTACGCGT 60 STM0016 intergenic 16432 16493 - down GACCAGGCTGAAAAAAGACGCGTAAAAGGCTCACGGATGAGCCTGATACTGCAAATGATAA GCTGGATCAAGAATAGAGTGACCTAGACCAGGCTGAAAAAAGACGCGTAAAAGGCTCACGGATGAGCCTGATACTGCAAATGATAATTAATCTGAATTATTACCTTCGATA TTATCATTTGCAGTATCAGGCTCATCCGTGAGCCT 35 TTerm_0005 NC_003197.2 52226 52238 13 52244 52256 13 5 92 0 21 57 42 58 41 0 52240 TAAAAAAACCCGC GCGGGTTTTTCTA True AGCAGGCAT CAAAGCTGA True True + TAAAAAAACCCGC TTTAC GCGGGTTTTTCTA CAAAGCTGA 82 STM0043 intergenic 51829 52280 - down ATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTA CTGCACAGATCAACAAACTGGCTTAATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTATCATTATGAGTTCTGTCATTGAGGA TAACTCCGATATTGGTACGATACGCCCAGAAAAACAACCTCTACTTTCTAAGCAAGTTTTGAATATTATTTTTATGTCGTTTCTGAATTTAACCTCAGATTAAAATGAGTAAGTAAGGTGTACATGAAAAGTAGTTAACCCGACGGCATCAATCAATTATTAAATCTTACATCAGGATTGCGTTTATTAGTTTTTGAATGAGCGATGTTTTTATTTGCTAAGGTGGTCACAGTTTTTTCAGTAATGAAATAAGAAAAGGAAAACAGTGAAAGAAAATAACTTTCAAGTATTACGTGACTAAGGGAGGGGTAGCTGAAAAAATAGGCTGGTCAGGAAGAGCGTGAACGAGTGAGGTCAGAGCCAGCGGTTGTCGAGCAAAACGGCAGATAGCAGGCATAAAAAAACCCGCTTTACGCGGGTTTTTCTA 427 TTerm_0006 NC_003197.2 58888 58898 11 58906 58916 11 7 100 0 22 63 36 63 36 0 58901 AAAAACCAGCA TGCTGGTTTTT True TTCATCTGA TGGTTGTAA True True + AAAAACCAGCA CAATCGT TGCTGGTTTTT TGGTTGTAA 76 STM0049 intergenic 58746 58940 + down GATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGACAGGAAGAATAAGGCGTAGTCGTCATCCGTTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTTGGTTGTAATGCCTACAGGGATAA TGTGGATGTTCGTGAGGTCGAATAAGATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGACAGGAAGAATAAGGCGTAGTCGTCATCCGTTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTTGGTTGTAATGCCTACAGGGATAAGGGAAATGGGCAAAATAAAATATGG GATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGACAGGAAGAATAAGGCGTAGTCGTCATCCGTTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTT 170 TTerm_0007 NC_003197.2 73865 73875 11 73880 73890 11 4 100 0 22 63 36 63 36 0 73877 ATGATTCATCC GGATGAATCAT True CTCCAGCAA GTCTTTTAC False True + ATGATTCATCC TGCG GGATGAATCAT GTCTTTTAC 68 STM0063 intergenic 73837 74007 + down GTTTCTCTTCTTTCATTCTCTCCAGCAATGATTCATCCTGCGGGATGAATCATGTCTTTTACTGATATCGCTCCCTGTTTATCATTAATTTCTAATTATCGGCGATTTTAGATGGCGGCCTCCGGGCGCGCTGGTTACTCTGAAAACGGTTTACGCAATTTTTACAAAAG TGCCGGTTCCCTCTATCCTGAGTAAGTTTCTCTTCTTTCATTCTCTCCAGCAATGATTCATCCTGCGGGATGAATCATGTCTTTTACTGATATCGCTCCCTGTTTATCATTAATTTCTAATTATCGGCGATTTTAGATGGCGGCCTCCGGGCGCGCTGGTTACTCTGAAAACGGTTTACGCAATTTTTACAAAAGAGAATAGCTATGCATGAAGCACAAA GTTTCTCTTCTTTCATTCTCTCCAGCAATGATTCATCCTGCGGGATGAATCAT 53 TTerm_0008 NC_003197.2 74989 74994 6 75000 75005 6 5 100 0 12 33 66 33 66 0 74996 ACGGCA TGCCGT True CTTCGCCCA TGTTTTCGC False True + ACGGCA TGTTC TGCCGT TGTTTTCGC 56 STM0064 intergenic 74838 75088 + down CGACTAAATACCTTCGTGATGTGGTTGTGGTAATCAAGATTAATTGATTACAAAGGGCAATATATTATTGCCCTTTTGTTTTTGCCCCCCGGTTATTCGGTCAGATAAATAACGCCTTTCACCATTCATGTTTCGACAGTTTCTTCGCCCACGGCATGTTCTGCCGTTGTTTTCGCGTTAAGAATAGTCCGTTTAAAGACATCCGGGCCAACGGCATCCATTTGCGTGACGTAATTGCCATTACGATAAA TGTGCTGGGGCTGGATGTATTATAGCGACTAAATACCTTCGTGATGTGGTTGTGGTAATCAAGATTAATTGATTACAAAGGGCAATATATTATTGCCCTTTTGTTTTTGCCCCCCGGTTATTCGGTCAGATAAATAACGCCTTTCACCATTCATGTTTCGACAGTTTCTTCGCCCACGGCATGTTCTGCCGTTGTTTTCGCGTTAAGAATAGTCCGTTTAAAGACATCCGGGCCAACGGCATCCATTTGCGTGACGTAATTGCCATTACGATAAATGCGGTTAATTGGCCCTTCAGACGC CGACTAAATACCTTCGTGATGTGGTTGTGGTAATCAAGATTAATTGATTACAAAGGGCAATATATTATTGCCCTTTTGTTTTTGCCCCCCGGTTATTCGGTCAGATAAATAACGCCTTTCACCATTCATGTTTCGACAGTTTCTTCGCCCACGGCATGTTCTGCCGT 167 TTerm_0009 NC_003197.2 75521 75531 11 75539 75549 11 7 81 0 12 63 36 66 33 0 75534 CATTTAATGGC GCTATTAAGTG True TTTTTATGC AGTTTTTAT False True + CATTTAATGGC ATTGATG GCTATTAAGTG AGTTTTTAT 40 STM0065 intergenic 75435 75812 + down TGCATTTGATTTGTTTTTTATATTTTTAATATATTGATTTTTAAAATTTTTTTGTCGTTAACTTTCTTGATTTTGAATTTTTATGCATTTAATGGCATTGATGGCTATTAAGTGAGTTTTTATCGTTGTTTTTTGTTGTTTTAATGTCAAATTTGACCATTTGGTCCACTTTTTATCATGCCAGCCAGTTTTTTGCGAACTCAAGGAAGCGCAAGCGTTTTCTATCGTAACTTAGTTGATCTTTTTGCCTCTTAAACAGAATAACTTCCTTATAATGTGCAAAATAACATAAAAAACACCCTCTTTAAGTTGACTTTTATCCGGCTTAACTTCAGAATGCCGCCGTTTGCCAGAAATCCACGGGTAAGCAAATTTGC TTGCTGTTTTTTGTTGATTTTATGATGCATTTGATTTGTTTTTTATATTTTTAATATATTGATTTTTAAAATTTTTTTGTCGTTAACTTTCTTGATTTTGAATTTTTATGCATTTAATGGCATTGATGGCTATTAAGTGAGTTTTTATCGTTGTTTTTTGTTGTTTTAATGTCAAATTTGACCATTTGGTCCACTTTTTATCATGCCAGCCAGTTTTTTGCGAACTCAAGGAAGCGCAAGCGTTTTCTATCGTAACTTAGTTGATCTTTTTGCCTCTTAAACAGAATAACTTCCTTATAATGTGCAAAATAACATAAAAAACACCCTCTTTAAGTTGACTTTTATCCGGCTTAACTTCAGAATGCCGCCGTTTGCCAGAAATCCACGGGTAAGCAAATTTGCATTGCTTCATACTGACTGAATGAAT TGCATTTGATTTGTTTTTTATATTTTTAATATATTGATTTTTAAAATTTTTTTGTCGTTAACTTTCTTGATTTTGAATTTTTATGCATTTAATGGCATTGATGGCTATTAAGTG 114 TTerm_0010 NC_003197.2 80325 80335 11 80340 80350 11 4 100 0 22 63 36 63 36 0 80337 AAAGGGTTTCT AGAAACCCTTT True TAATGTTGA TTTTATCTT False True + AAAGGGTTTCT GTAA AGAAACCCTTT TTTTATCTT 60 STM0067 intergenic 80274 80459 + down ACAAAGGGTCCGGCGGATATTGCTCTAACCGGACCTGTAATATAATGTTGAAAGGGTTTCTGTAAAGAAACCCTTTTTTTATCTTGCGTAAGGTCATTCCTGGAGAAGTCCGTTTCCGTAACCACATTTTCAATGTAATAAGCACGATATTGCTCACACTAATCAATATTTAAGTCGCATACTAT GCACGCGCAGATCAAAAAGTCGTAAACAAAGGGTCCGGCGGATATTGCTCTAACCGGACCTGTAATATAATGTTGAAAGGGTTTCTGTAAAGAAACCCTTTTTTTATCTTGCGTAAGGTCATTCCTGGAGAAGTCCGTTTCCGTAACCACATTTTCAATGTAATAAGCACGATATTGCTCACACTAATCAATATTTAAGTCGCATACTATCTTGCATATCCACAATTTTAATATG ACAAAGGGTCCGGCGGATATTGCTCTAACCGGACCTGTAATATAATGTTGAAAGGGTTTCTGTAAAGAAACCCTTT 76 TTerm_0011 NC_003197.2 95460 95467 8 95475 95482 8 7 100 0 16 100 0 100 0 0 95470 AAATAATA TATTATTT True CCCCCTGTA CTTTTAATG False True + AAATAATA GTTTTTA TATTATTT CTTTTAATG 32 STM0083 intergenic 95465 95952 + down TAGTTTTTATATTATTTCTTTTAATGGCGTAATTTTTATTGAATCACGCGGCAATACGCTAGTTTTATTCATAAGCAACATAACAGAATTGAGTTATGTTTTAATTTCCCAGAGTGATATTACCGGTTGTATGTCTATGGTTGCGCGGCCTGTTACTGATAGTGTTTCTTTCGGGGCGATTTTATTGTAGCGGCATAGGGTAATCACCGTAGCTGAAGGGAAAAGGCACGAACACAGCACTATAGAGTATGTTTAATAATGTATTTTTTTATGAAGTAATGTCTGCAGTTGTATCTCTAAAATAAAAACAATGAACTTTTCATCTAAATAATTTTTCAGTGAATTATGGTTATTTATTAATATATTTCTAATTTGAAATACAAATCAATTTATAACACATATTCTTACCCGGAAGGCATTGATACATATCCACGCTTCCTCGTACAGTAATAAATGAATATGTGATAAAGTTACTGACTACAGGTAT AAGAAACTTAACCCCCTGTAAATAATAGTTTTTATATTATTTCTTTTAATGGCGTAATTTTTATTGAATCACGCGGCAATACGCTAGTTTTATTCATAAGCAACATAACAGAATTGAGTTATGTTTTAATTTCCCAGAGTGATATTACCGGTTGTATGTCTATGGTTGCGCGGCCTGTTACTGATAGTGTTTCTTTCGGGGCGATTTTATTGTAGCGGCATAGGGTAATCACCGTAGCTGAAGGGAAAAGGCACGAACACAGCACTATAGAGTATGTTTAATAATGTATTTTTTTATGAAGTAATGTCTGCAGTTGTATCTCTAAAATAAAAACAATGAACTTTTCATCTAAATAATTTTTCAGTGAATTATGGTTATTTATTAATATATTTCTAATTTGAAATACAAATCAATTTATAACACATATTCTTACCCGGAAGGCATTGATACATATCCACGCTTCCTCGTACAGTAATAAATGAATATGTGATAAAGTTACTGACTACAGGTATAATAATATGAGTAATAAAAAAAATC TAGTTTTTATATTATTT 17 TTerm_0012 NC_003197.2 95542 95549 8 95558 95565 8 8 100 0 16 75 25 75 25 0 95553 AACATAAC GTTATGTT True TCATAAGCA TTAATTTCC False True + AACATAAC AGAATTGA GTTATGTT TTAATTTCC 48 STM0083 intergenic 95465 95952 + down TAGTTTTTATATTATTTCTTTTAATGGCGTAATTTTTATTGAATCACGCGGCAATACGCTAGTTTTATTCATAAGCAACATAACAGAATTGAGTTATGTTTTAATTTCCCAGAGTGATATTACCGGTTGTATGTCTATGGTTGCGCGGCCTGTTACTGATAGTGTTTCTTTCGGGGCGATTTTATTGTAGCGGCATAGGGTAATCACCGTAGCTGAAGGGAAAAGGCACGAACACAGCACTATAGAGTATGTTTAATAATGTATTTTTTTATGAAGTAATGTCTGCAGTTGTATCTCTAAAATAAAAACAATGAACTTTTCATCTAAATAATTTTTCAGTGAATTATGGTTATTTATTAATATATTTCTAATTTGAAATACAAATCAATTTATAACACATATTCTTACCCGGAAGGCATTGATACATATCCACGCTTCCTCGTACAGTAATAAATGAATATGTGATAAAGTTACTGACTACAGGTAT AAGAAACTTAACCCCCTGTAAATAATAGTTTTTATATTATTTCTTTTAATGGCGTAATTTTTATTGAATCACGCGGCAATACGCTAGTTTTATTCATAAGCAACATAACAGAATTGAGTTATGTTTTAATTTCCCAGAGTGATATTACCGGTTGTATGTCTATGGTTGCGCGGCCTGTTACTGATAGTGTTTCTTTCGGGGCGATTTTATTGTAGCGGCATAGGGTAATCACCGTAGCTGAAGGGAAAAGGCACGAACACAGCACTATAGAGTATGTTTAATAATGTATTTTTTTATGAAGTAATGTCTGCAGTTGTATCTCTAAAATAAAAACAATGAACTTTTCATCTAAATAATTTTTCAGTGAATTATGGTTATTTATTAATATATTTCTAATTTGAAATACAAATCAATTTATAACACATATTCTTACCCGGAAGGCATTGATACATATCCACGCTTCCTCGTACAGTAATAAATGAATATGTGATAAAGTTACTGACTACAGGTATAATAATATGAGTAATAAAAAAAATC TAGTTTTTATATTATTTCTTTTAATGGCGTAATTTTTATTGAATCACGCGGCAATACGCTAGTTTTATTCATAAGCAACATAACAGAATTGAGTTATGTT 100 TTerm_0013 NC_003197.2 97847 97854 8 97863 97870 8 8 87 0 11 56 43 57 42 0 97858 AAGAGCCT AGGCTATT True GAAAGATTA TTATTCGTC False True + AAGAGCCT GGCCCATT AGGCTATT TTATTCGTC 46 STM0084 intergenic 97848 98245 + down GAGCCTGGCCCATTAGGCTATTTTATTCGTCGGCGATCTGGCATCCAGCGTGTCTGGAGGTTCAGATGCTGTTGGCGCTGCGCTTATTGGGTCTGTATCATCATGTAATGGATTGATATTACAGTCATTACAGGCAAATTTAGCGCAGCGCCGCCCGACAAGAAGGCCTTAAACCGATTGGTCAGCGATTTAAGGCTACTATCATCACCGACCTTTCCACACCGGATCGCGCTTTTCCGCAAACGCCTGCGGCCCTTCGAGAGCGTCTTCCGGAGGCAGGACGGCGCCAGCTCCTGGCTGGCGTTAATTCAATTTTTTCTGATTAGCCGCTCAATAATATTCACTATTAGCCTGGCGAATTTGTCACTACACTTTGTAATAAAAAACAGATCATCAC ATTTAACCGCATGGCGAAAGATTAAGAGCCTGGCCCATTAGGCTATTTTATTCGTCGGCGATCTGGCATCCAGCGTGTCTGGAGGTTCAGATGCTGTTGGCGCTGCGCTTATTGGGTCTGTATCATCATGTAATGGATTGATATTACAGTCATTACAGGCAAATTTAGCGCAGCGCCGCCCGACAAGAAGGCCTTAAACCGATTGGTCAGCGATTTAAGGCTACTATCATCACCGACCTTTCCACACCGGATCGCGCTTTTCCGCAAACGCCTGCGGCCCTTCGAGAGCGTCTTCCGGAGGCAGGACGGCGCCAGCTCCTGGCTGGCGTTAATTCAATTTTTTCTGATTAGCCGCTCAATAATATTCACTATTAGCCTGGCGAATTTGTCACTACACTTTGTAATAAAAAACAGATCATCACAGGCTAATCATGATCCTCATTATTT GAGCCTGGCCCATTAGGCTATT 22 TTerm_0014 NC_003197.2 133779 133792 14 133797 133810 14 4 92 0 23 46 53 46 53 0 133794 AAAAAAACCCGCGC GCGCGGGTTTTGTT True TCAGGCATA TGACTTCGA True True + AAAAAAACCCGCGC AACG GCGCGGGTTTTGTT TGACTTCGA 94 STM0114 intergenic 133758 133826 - down AGTCAGCTCGAAGTCAAACAAAACCCGCGCCGTTGCGCGGGTTTTTTTATGCCTGACGCAAGGCGCCC GACCGGTGGGCGGCATTCAACATTAAGTCAGCTCGAAGTCAAACAAAACCCGCGCCGTTGCGCGGGTTTTTTTATGCCTGACGCAAGGCGCCCCTGGAGACAAGGACCACATCATGAG GGGCGCCTTGCGTCAGGCATAAAAAAACCCGCGCAACGGCGCGGGTTTTGTT 52 TTerm_0015 NC_003197.2 135520 135535 16 135541 135556 16 5 93 0 27 65 34 66 33 0 135537 GCAGAATAAATCAGAA TTCTGGTTTATTCTGC True AAAACCGGG TTTTTAGCG True True + GCAGAATAAATCAGAA ACAAA TTCTGGTTTATTCTGC TTTTTAGCG 78 STM0115 intergenic 135513 135770 + down AACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGCTTTTTAGCGTATATCAAAAATTTTATGCTGAATTAACGGTGAGCGATGCTTTTCGTCGCTGTGAAAAATAGATGAATTGCTGTAAGTCTGCATTTATAAGCGATTATTTATTACCAGGTGTGATTCAGACGGAGTATTTCTCCATTTCTTCTCTTCTTGCCTCCTGATTATTCTAACCTTCCCCATCTTTACGTCATTCCACCCAATTGCCAGG ATTAGTCTCTGTTTGTAAGCGATAAAACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGCTTTTTAGCGTATATCAAAAATTTTATGCTGAATTAACGGTGAGCGATGCTTTTCGTCGCTGTGAAAAATAGATGAATTGCTGTAAGTCTGCATTTATAAGCGATTATTTATTACCAGGTGTGATTCAGACGGAGTATTTCTCCATTTCTTCTCTTCTTGCCTCCTGATTATTCTAACCTTCCCCATCTTTACGTCATTCCACCCAATTGCCAGGCGTGATAGCGAGCGGTTAAGGTGTC AACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGC 43 TTerm_0016 NC_003197.2 161503 161514 12 161519 161530 12 4 100 0 24 50 50 50 50 0 161516 AAAAAGGCGCAG CTGCGCCTTTTT True ACACAGATA TATGGATGC True True + AAAAAGGCGCAG GCGA CTGCGCCTTTTT TATGGATGC 88 STM0136 intergenic 161394 161532 + down TGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCAGTACTGGCATTATTGCCGAAGGGCGCTACGCTTATTCGGCCTGGCATTGAACACAGATAAAAAGGCGCAGGCGACTGCGCCTTTTTTA ACAGTGTCACGGTCGCCTGAGCTAATGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCAGTACTGGCATTATTGCCGAAGGGCGCTACGCTTATTCGGCCTGGCATTGAACACAGATAAAAAGGCGCAGGCGACTGCGCCTTTTTTATGGATGCAACAAGATGAAAAAACTG TGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCAGTACTGGCATTATTGCCGAAGGGCGCTACGCTTATTCGGCCTGGCATTGAACACAGATAAAAAGGCGCAGGCGACTGCGCCTTTTT 136 TTerm_0017 NC_003197.2 180811 180821 11 180826 180836 11 4 100 0 22 36 63 36 63 0 180823 AAAAGCCGGCC GGCCGGCTTTT True TGTAAGCGA TTTGATAAT True True + AAAAGCCGGCC CGAC GGCCGGCTTTT TTTGATAAT 92 STM0153 intergenic 180807 180898 + down GCGAAAAGCCGGCCCGACGGCCGGCTTTTTTTGATAATCTCATGGAGTTTGTGAGGTTATTAGCGAAAGCGATAATTCGTGATCCGTTTGT TGACATTCGCCGTCTGGTGATGTAAGCGAAAAGCCGGCCCGACGGCCGGCTTTTTTTGATAATCTCATGGAGTTTGTGAGGTTATTAGCGAAAGCGATAATTCGTGATCCGTTTGTTGTTTCAAAATTGTTAACAATTTTG GCGAAAAGCCGGCCCGACGGCCGGCTTTT 29 TTerm_0018 NC_003197.2 182464 182475 12 182480 182491 12 4 100 0 24 58 41 58 41 0 182477 AAAAAAGCGGCT AGCCGCTTTTTT True CCCGATACA TATGCATGG True True + AAAAAAGCGGCT TTAC AGCCGCTTTTTT TATGCATGG 88 STM0154 intergenic 182431 182714 + down TCTTCTGTAGGTGGCAATGCGCCACCCGATACAAAAAAGCGGCTTTACAGCCGCTTTTTTTATGCATGGCAAATCAGATGTGTCAAATGATGGCGAAGGATAACGAAACCGCAAAATTTATCGTTTCCGCAGCAGTACGTTTTTCAAAGCTTATGCCGTCGGTAGTGCCTTTGTCTGTCATTTTCGACCAACTAATTGTTTCATAAGAAATACCTCTCCTTACTTTGTCATCATCCTGAAATTGGTAACGCTATAAAATAATAGCGAGCTAATTATGAGGTTT GAACCCGAAAGCGAAGAAGAAATAATCTTCTGTAGGTGGCAATGCGCCACCCGATACAAAAAAGCGGCTTTACAGCCGCTTTTTTTATGCATGGCAAATCAGATGTGTCAAATGATGGCGAAGGATAACGAAACCGCAAAATTTATCGTTTCCGCAGCAGTACGTTTTTCAAAGCTTATGCCGTCGGTAGTGCCTTTGTCTGTCATTTTCGACCAACTAATTGTTTCATAAGAAATACCTCTCCTTACTTTGTCATCATCCTGAAATTGGTAACGCTATAAAATAATAGCGAGCTAATTATGAGGTTTGATATATGAAACTTTTTCTGACAAC TCTTCTGTAGGTGGCAATGCGCCACCCGATACAAAAAAGCGGCTTTACAGCCGCTTTTTT 60 TTerm_0019 NC_003197.2 188465 188472 8 188478 188485 8 5 100 0 16 25 75 25 75 0 188474 AAGGGGGC GCCCCCTT True TACATTTTA TTTATTCAT False True + AAGGGGGC TAATT GCCCCCTT TTTATTCAT 80 STM0158 intergenic 188454 188515 + down TTTACATTTTAAGGGGGCTAATTGCCCCCTTTTTATTCATATTATATGTTTCTGTATTTTC CGTGATTTTCCAGACTGCGGTTTAATTTACATTTTAAGGGGGCTAATTGCCCCCTTTTTATTCATATTATATGTTTCTGTATTTTCTATCTTTTTAAGATGTTGCGTATTT TTTACATTTTAAGGGGGCTAATTGCCCCCTT 31 TTerm_0020 NC_003197.2 188465 188472 8 188478 188485 8 5 100 0 16 25 75 25 75 0 188474 AAGGGGGC GCCCCCTT True TACATTTTA TTTATTCAT False True + AAGGGGGC TAATT GCCCCCTT TTTATTCAT 80 STM0159 intergenic 188454 188515 - down GAAAATACAGAAACATATAATATGAATAAAAAGGGGGCAATTAGCCCCCTTAAAATGTAAA AAATACGCAACATCTTAAAAAGATAGAAAATACAGAAACATATAATATGAATAAAAAGGGGGCAATTAGCCCCCTTAAAATGTAAATTAAACCGCAGTCTGGAAAATCACG TTTACATTTTAAGGGGGCTAATTGCCCCCTT 31 TTerm_0021 NC_003197.2 244374 244381 8 244391 244398 8 9 87 0 11 81 18 85 14 0 244385 GTAAAGAT ATTTTTAC True GGACTTTTG TTTTTCCAG False True + GTAAAGAT GGACAATAA ATTTTTAC TTTTTCCAG 22 STM0208 intergenic 244363 244493 + down ATGGACTTTTGTAAAGATGGACAATAAATTTTTACTTTTTCCAGAAACTTTATTCCGGAACTTCGCGTTATAAAATGAATCTGACGTACACAGCAATTTTGCGTTACCTGTTAATCGAGATTGAAACACA GCGTTTGATGGCGGTCGAACAGTAAATGGACTTTTGTAAAGATGGACAATAAATTTTTACTTTTTCCAGAAACTTTATTCCGGAACTTCGCGTTATAAAATGAATCTGACGTACACAGCAATTTTGCGTTACCTGTTAATCGAGATTGAAACACATGAAAAAAACCACATTAGCAATGAG ATGGACTTTTGTAAAGATGGACAATAAATTTTTAC 35 TTerm_0022 NC_003197.2 249261 249266 6 249271 249276 6 4 100 0 12 0 100 0 100 0 249268 GGGGGC GCCCCC True ATGCAAAGG GCTTTTCAC False True + GGGGGC TGTC GCCCCC GCTTTTCAC 72 STM0212 intergenic 249253 249290 + down TGCAAAGGGGGGCTGTCGCCCCCGCTTTTCACTCGCT AACCGTGTTACCGCATTCGCCGTAATGCAAAGGGGGGCTGTCGCCCCCGCTTTTCACTCGCTTAATCAATAGTGCGCAATAATTCGT TGCAAAGGGGGGCTGTCGCCCCC 23 TTerm_0023 NC_003197.2 249261 249266 6 249271 249276 6 4 100 0 12 0 100 0 100 0 249268 GGGGGC GCCCCC True ATGCAAAGG GCTTTTCAC False True + GGGGGC TGTC GCCCCC GCTTTTCAC 72 STM0213 intergenic 249253 249290 - down AGCGAGTGAAAAGCGGGGGCGACAGCCCCCCTTTGCA ACGAATTATTGCGCACTATTGATTAAGCGAGTGAAAAGCGGGGGCGACAGCCCCCCTTTGCATTACGGCGAATGCGGTAACACGGTT TGCAAAGGGGGGCTGTCGCCCCC 23 TTerm_0024 NC_003197.2 249254 249265 12 249273 249284 12 7 83 0 14 37 62 40 60 0 249268 TGCAAAGGGGGG CCCCGCTTTTCA True CGCCGTAAT CTCGCTTAA False True + TGCAAAGGGGGG CTGTCGC CCCCGCTTTTCA CTCGCTTAA 76 STM0212 intergenic 249253 249290 + down TGCAAAGGGGGGCTGTCGCCCCCGCTTTTCACTCGCT AACCGTGTTACCGCATTCGCCGTAATGCAAAGGGGGGCTGTCGCCCCCGCTTTTCACTCGCTTAATCAATAGTGCGCAATAATTCGT TGCAAAGGGGGGCTGTCGCCCCCGCTTTTCA 31 TTerm_0025 NC_003197.2 249254 249265 12 249273 249284 12 7 83 0 14 37 62 40 60 0 249268 TGCAAAGGGGGG CCCCGCTTTTCA True CGCCGTAAT CTCGCTTAA False True + TGCAAAGGGGGG CTGTCGC CCCCGCTTTTCA CTCGCTTAA 76 STM0213 intergenic 249253 249290 - down AGCGAGTGAAAAGCGGGGGCGACAGCCCCCCTTTGCA ACGAATTATTGCGCACTATTGATTAAGCGAGTGAAAAGCGGGGGCGACAGCCCCCCTTTGCATTACGGCGAATGCGGTAACACGGTT TGCAAAGGGGGGCTGTCGCCCCCGCTTTTCA 31 TTerm_0026 NC_003197.2 255196 255203 8 255211 255218 8 7 100 0 16 12 87 12 87 0 255206 AGGGGGCC GGCCCCCT True GTTTGGTTA TTTTCACTT False True + AGGGGGCC TGTATAT GGCCCCCT TTTTCACTT 80 STM0216 intergenic 255023 255269 + down TAAGGCTTGATAACTCCCTAAAATAGTTCGAGTTGCAGGAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGTGAAGGCAACGCGCCTGCGGCTCGAAATATGAAGGGGAGAGCCCTTATAGACCAGGTAGTATCACGTTTGGTTAGGGGGCCTGTATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTGATGCCGGGCAGATCAAATCTTTCG AGAAAGCTTCGTAGAAGCCGAGTAATAAGGCTTGATAACTCCCTAAAATAGTTCGAGTTGCAGGAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGTGAAGGCAACGCGCCTGCGGCTCGAAATATGAAGGGGAGAGCCCTTATAGACCAGGTAGTATCACGTTTGGTTAGGGGGCCTGTATATGGCCCCCTTTTTCACTTTTATATCTGTGCGGTTTGATGCCGGGCAGATCAAATCTTTCGAGGATTTTAGAATGGCTGAAATTAC TAAGGCTTGATAACTCCCTAAAATAGTTCGAGTTGCAGGAAGGCGGCAAGCTCGAGAATTCCCGGGAGCTTACATCAGTAAGTGACCGGGATGAGCGAGTGAAGGCAACGCGCCTGCGGCTCGAAATATGAAGGGGAGAGCCCTTATAGACCAGGTAGTATCACGTTTGGTTAGGGGGCCTGTATATGGCCCCCT 195 TTerm_0027 NC_003197.2 256141 256150 10 256155 256164 10 4 90 0 15 25 75 22 77 0 256152 AGGAGCCGCC GGCGGCTTCT True TTTTCCTGA TTTTGCGCC False True + AGGAGCCGCC TGAG GGCGGCTTCT TTTTGCGCC 78 STM0217 intergenic 256132 256265 + down TTTTCCTGAGGAGCCGCCTGAGGGCGGCTTCTTTTTGCGCCTCTCTTGTAAAATCAGCCGACGCCTGGCGTCTGCGCTGAAATGCGACGTACAATGTCGCCGGAATTAACTCATATCAATCGTTGACAGTCTC TGCTGCGATGTCTAAGCAGTCCTGATTTTCCTGAGGAGCCGCCTGAGGGCGGCTTCTTTTTGCGCCTCTCTTGTAAAATCAGCCGACGCCTGGCGTCTGCGCTGAAATGCGACGTACAATGTCGCCGGAATTAACTCATATCAATCGTTGACAGTCTCAGGAAAGAAACATGGCTACCAATGC TTTTCCTGAGGAGCCGCCTGAGGGCGGCTTCT 32 TTerm_0028 NC_003197.2 257765 257784 20 257793 257812 20 8 85 0 25 37 62 35 64 0 257788 CAAAGCGCCGCGCAGAAGAC GTCTCCTGTGCGGCGTTTTG True GTGGTGTAC CTTTTTATT False True + CAAAGCGCCGCGCAGAAGAC ATTATCAG GTCTCCTGTGCGGCGTTTTG CTTTTTATT 82 STM0219 intergenic 257706 257836 + down TTGATCTGTACGCAGATATAAACTCATTCCACCGCTAACCTGGCGGATGAGTGGTGTACAAAGCGCCGCGCAGAAGACATTATCAGGTCTCCTGTGCGGCGTTTTGCTTTTTATTCCGTTTCAACACTTC AGAAGCAGAACTGATGCAGTTCTGATTGATCTGTACGCAGATATAAACTCATTCCACCGCTAACCTGGCGGATGAGTGGTGTACAAAGCGCCGCGCAGAAGACATTATCAGGTCTCCTGTGCGGCGTTTTGCTTTTTATTCCGTTTCAACACTTCTGGACGTTTCATGAAGCAATTAACC TTGATCTGTACGCAGATATAAACTCATTCCACCGCTAACCTGGCGGATGAGTGGTGTACAAAGCGCCGCGCAGAAGACATTATCAGGTCTCCTGTGCGGCGTTTTG 106 TTerm_0029 NC_003197.2 259147 259153 7 259160 259166 7 6 100 0 14 28 71 28 71 0 259156 AGCCGTG CACGGCT True GTCAGGTTA TTTTTGTGG False True + AGCCGTG GTTTTA CACGGCT TTTTTGTGG 68 STM0220 intergenic 259043 259337 + down CGATTATCCCGCGACAGAAGATCGTGCTATTTGTTAGCGTTGGGCTTCGGTGATATAGTCTGCGCCACCTGATCGCAGGTTTTTGGCTTTTTTCGGTCAGGTTAGCCGTGGTTTTACACGGCTTTTTTGTGGATACACAAAATCATTCAGGACGCATCGGGACGGCAGGCGAGTACGTTCCCGGCGTGCGCAGACAGCGCACGACAGGGGCGATGACGCGCGGTCATCCGCGAAGCGAACCGAAGAGAATGTGTATAAAGGCTTCAGTATTCCTGAGTACCGCTAAATCCTTTC ACAAGTGATACGGCTCTCACGCTGACGATTATCCCGCGACAGAAGATCGTGCTATTTGTTAGCGTTGGGCTTCGGTGATATAGTCTGCGCCACCTGATCGCAGGTTTTTGGCTTTTTTCGGTCAGGTTAGCCGTGGTTTTACACGGCTTTTTTGTGGATACACAAAATCATTCAGGACGCATCGGGACGGCAGGCGAGTACGTTCCCGGCGTGCGCAGACAGCGCACGACAGGGGCGATGACGCGCGGTCATCCGCGAAGCGAACCGAAGAGAATGTGTATAAAGGCTTCAGTATTCCTGAGTACCGCTAAATCCTTTCAGGGACAAAAAACGCGTTATGTTGT CGATTATCCCGCGACAGAAGATCGTGCTATTTGTTAGCGTTGGGCTTCGGTGATATAGTCTGCGCCACCTGATCGCAGGTTTTTGGCTTTTTTCGGTCAGGTTAGCCGTGGTTTTACACGGCT 123 TTerm_0030 NC_003197.2 289151 289159 9 289169 289177 9 9 88 0 13 83 16 87 12 0 289163 AAGTTTAAT ATCAAACTT True TCATTACGA TTAAATTGA False True + AAGTTTAAT TCATTGAGC ATCAAACTT TTAAATTGA 34 STM0248 intergenic 288811 289190 + down GCGTTATGGATAAAAGATGAGCGGTTAAAACAAAAATGCATTTTTCCGCTTGTCTTCCTGAACCGACTCCCTATAATGCGCCTCCATCGACACGGCGGATGTGAATCACTTCACACAAACAGCCGGTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCAACGGTGAGCGAAAGCCGCGTTGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTAAATTGAAGAG AGCGATAAAAAAGCAGCAAAAATAAGCGTTATGGATAAAAGATGAGCGGTTAAAACAAAAATGCATTTTTCCGCTTGTCTTCCTGAACCGACTCCCTATAATGCGCCTCCATCGACACGGCGGATGTGAATCACTTCACACAAACAGCCGGTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCAACGGTGAGCGAAAGCCGCGTTGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCAGATTGAACGC GCGTTATGGATAAAAGATGAGCGGTTAAAACAAAAATGCATTTTTCCGCTTGTCTTCCTGAACCGACTCCCTATAATGCGCCTCCATCGACACGGCGGATGTGAATCACTTCACACAAACAGCCGGTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCAACGGTGAGCGAAAGCCGCGTTGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTT 366 TTerm_0031 NC_003197.2 291074 291091 18 291098 291115 18 6 77 0 16 58 41 57 42 0 291094 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True + AATACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTTTT GCTCTTTAA 56 STM0251 intergenic 291059 291245 + down AGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAC TCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGG AGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTT 56 TTerm_0032 NC_003197.2 294912 294924 13 294929 294941 13 4 92 0 21 42 57 41 58 0 294926 AAGAGCCCTGAGC GCTCAGGGCTTTT True CACTTATTA TCTTTCCAT False True + AAGAGCCCTGAGC ATTA GCTCAGGGCTTTT TCTTTCCAT 74 STM0254 intergenic 294912 295060 + down AGAGCCCTGAGCATTAGCTCAGGGCTTTTTCTTTCCATGTCATTTAATTATTGCTCAATTCGCAAAAATCCTCTGCATTTCTCGCTCTTTTTCTGCAAAGCGCTGAAGGTCATAATCCCCTCAGTTAACGAACATAGTGATTAAAAAG GTCCCGTCCGTTCCGCCACTTATTAAGAGCCCTGAGCATTAGCTCAGGGCTTTTTCTTTCCATGTCATTTAATTATTGCTCAATTCGCAAAAATCCTCTGCATTTCTCGCTCTTTTTCTGCAAAGCGCTGAAGGTCATAATCCCCTCAGTTAACGAACATAGTGATTAAAAAGAGGAATTCTATGACTATCCCTGCAT AGAGCCCTGAGCATTAGCTCAGGGCTTTT 29 TTerm_0033 NC_003197.2 299875 299885 11 299893 299903 11 7 100 0 22 36 63 36 63 0 299888 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True + AAAAGGCGCCG GGGGAAG CGGCGCCTTTT GGCTTTTTC 92 STM0259 intergenic 299868 299924 + down CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATAT GCTGGAAGCGCATAAAGCGGTATAGCAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATATCAGGAGTCTGGCGTGCTATTGTCCT CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTT 35 TTerm_0034 NC_003197.2 299875 299885 11 299893 299903 11 7 100 0 22 36 63 36 63 0 299888 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True + AAAAGGCGCCG GGGGAAG CGGCGCCTTTT GGCTTTTTC 92 STM0260 intergenic 299868 299924 - down ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTG AGGACAATAGCACGCCAGACTCCTGATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTGCTATACCGCTTTATGCGCTTCCAGC CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTT 35 TTerm_0035 NC_003197.2 304384 304401 18 304407 304424 18 5 94 0 31 69 30 70 29 0 304403 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True + AAAAAAAACCGTATCACT GTAAA AGGGATACGGTTTTTTTT CGTCTTCAA 86 STM0265 intergenic 304351 304666 + down ATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCAT GTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCATCACTCCAGGGCATCCCACTTCTCCA ATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTT 73 TTerm_0036 NC_003197.2 304384 304401 18 304407 304424 18 5 94 0 31 69 30 70 29 0 304403 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True + AAAAAAAACCGTATCACT GTAAA AGGGATACGGTTTTTTTT CGTCTTCAA 86 STM0266 intergenic 304351 304666 - down ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGAT TGGAGAAGTGGGATGCCCTGGAGTGATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGAC ATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTT 73 TTerm_0037 NC_003197.2 317391 317399 9 317407 317415 9 7 88 0 13 27 72 25 75 0 317402 CCGGCCAGA TCTGGCTGG True CTGTTTTTC TTTTATTGT False True + CCGGCCAGA TGTTATG TCTGGCTGG TTTTATTGT 58 STM0276 intergenic 317379 317678 + down CGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGGTTTTATTGTTTTGATTTTAAAGGAATTTACAGTGAATAAATGGCGTAACCCCACTGGGTGGTTATGTGCGGTAGCTATGCCTTTTGCACTGCTCCTGCTTTCCGGATGCGGCAGTAGCGATTCGCTACTTGACCCCTAATCGCAGCGGCCTGGCCTGAGCGTGAAAGCGTTTTACAAGGTGAATTCTGACAATCAGAAGAAAGCGGCGTCCATGAAGATACGTGTTGAGAATTAATGACCTACACAGAATTTTTAGAGGTTAA CTTCAAGGCCAACAAAGAAATTTAACGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGGTTTTATTGTTTTGATTTTAAAGGAATTTACAGTGAATAAATGGCGTAACCCCACTGGGTGGTTATGTGCGGTAGCTATGCCTTTTGCACTGCTCCTGCTTTCCGGATGCGGCAGTAGCGATTCGCTACTTGACCCCTAATCGCAGCGGCCTGGCCTGAGCGTGAAAGCGTTTTACAAGGTGAATTCTGACAATCAGAAGAAAGCGGCGTCCATGAAGATACGTGTTGAGAATTAATGACCTACACAGAATTTTTAGAGGTTAAGCAAAATGAACAGACCTTCATTCAA CGGCTGTTTTTCCGGCCAGATGTTATGTCTGGCTGG 36 TTerm_0038 NC_003197.2 342791 342801 11 342809 342819 11 7 81 0 12 90 9 88 11 0 342804 TTTACAATTTT AAAATAGTTAA True ATTTTTCTT TTTTGCTGT False True + TTTACAATTTT TGATATG AAAATAGTTAA TTTTGCTGT 24 STM0299 intergenic 342722 342830 + down TAGTAAACAACTATTAGTGTATTGTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTTGATATGAAAATAGTTAATTTTGCTGTAA AGACGTAGTGGGATATCAACCTTAATAGTAAACAACTATTAGTGTATTGTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTTGATATGAAAATAGTTAATTTTGCTGTAATGGCGGTAGCTTTGTTCGCCACTAA TAGTAAACAACTATTAGTGTATTGTGCCTTGTTTAAGGCGCAATACACATCAAATCATCTATTTTTCTTTTACAATTTTTGATATGAAAATAGTTAA 97 TTerm_0039 NC_003197.2 346686 346703 18 346712 346729 18 8 77 0 16 77 22 85 14 0 346707 AAAAATCAATTGCTGATT AATCTGAAATTCATCTTT True CATTGCAGA TTTGTAGGG True True + AAAAATCAATTGCTGATT GATTTTAA AATCTGAAATTCATCTTT TTTGTAGGG 48 STM0302 intergenic 346569 346968 + down CCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATA TGCATTGGCGCAGGAGGATACGTAGCCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATAAAGCATATGTCTTATGCACGACATT CCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTT 160 TTerm_0040 NC_003197.2 349631 349637 7 349642 349648 7 4 100 0 14 28 71 28 71 0 349639 CGACTGG CCAGTCG True GAGATATGC TCTTTTGAC False True + CGACTGG TCAG CCAGTCG TCTTTTGAC 60 STM0304 intergenic 349558 349672 + down CCCGTTTGGAATGGTTTTGATACGTTCCTGACTTAAACCCACATGATGACTGAATTGAGGCATCGAGATATGCGACTGGTCAGCCAGTCGTCTTTTGACGATGCCCAATACAAA AATTGATTTTCTGAATGATGATTAACCCGTTTGGAATGGTTTTGATACGTTCCTGACTTAAACCCACATGATGACTGAATTGAGGCATCGAGATATGCGACTGGTCAGCCAGTCGTCTTTTGACGATGCCCAATACAAAACATGATGCCGACTGACGGAAATGA CCCGTTTGGAATGGTTTTGATACGTTCCTGACTTAAACCCACATGATGACTGAATTGAGGCATCGAGATATGCGACTGGTCAGCCAGTCG 90 TTerm_0041 NC_003197.2 360937 360944 8 360952 360959 8 7 100 0 16 12 87 12 87 0 360947 GCCCGTCC GGACGGGC True TATTGATAG ATTTTAGCG False True + GCCCGTCC AGAAATG GGACGGGC ATTTTAGCG 72 STM0315 intergenic 360818 360974 + down TTCGGTGTTACTGGCGCTGTTATAGGGCTGTCTGGCTATTCGCGTGTAGCCGCAGCGCTATTTCAGCGCATCCAGGAGAGCTTATCTGGCAATGGATACCCGATATTCCATATTGATAGCCCGTCCAGAAATGGGACGGGCATTTTAGCGCTTTCT AGGAATGGCGTTTACGCCACAATAATTCGGTGTTACTGGCGCTGTTATAGGGCTGTCTGGCTATTCGCGTGTAGCCGCAGCGCTATTTCAGCGCATCCAGGAGAGCTTATCTGGCAATGGATACCCGATATTCCATATTGATAGCCCGTCCAGAAATGGGACGGGCATTTTAGCGCTTTCTTACTTCGCAGGAATCGCTTTCAGCA TTCGGTGTTACTGGCGCTGTTATAGGGCTGTCTGGCTATTCGCGTGTAGCCGCAGCGCTATTTCAGCGCATCCAGGAGAGCTTATCTGGCAATGGATACCCGATATTCCATATTGATAGCCCGTCCAGAAATGGGACGGGC 141 TTerm_0042 NC_003197.2 360937 360944 8 360952 360959 8 7 100 0 16 12 87 12 87 0 360947 GCCCGTCC GGACGGGC True TATTGATAG ATTTTAGCG False True + GCCCGTCC AGAAATG GGACGGGC ATTTTAGCG 72 STM0316 intergenic 360818 360974 - down AGAAAGCGCTAAAATGCCCGTCCCATTTCTGGACGGGCTATCAATATGGAATATCGGGTATCCATTGCCAGATAAGCTCTCCTGGATGCGCTGAAATAGCGCTGCGGCTACACGCGAATAGCCAGACAGCCCTATAACAGCGCCAGTAACACCGAA TGCTGAAAGCGATTCCTGCGAAGTAAGAAAGCGCTAAAATGCCCGTCCCATTTCTGGACGGGCTATCAATATGGAATATCGGGTATCCATTGCCAGATAAGCTCTCCTGGATGCGCTGAAATAGCGCTGCGGCTACACGCGAATAGCCAGACAGCCCTATAACAGCGCCAGTAACACCGAATTATTGTGGCGTAAACGCCATTCCT TTCGGTGTTACTGGCGCTGTTATAGGGCTGTCTGGCTATTCGCGTGTAGCCGCAGCGCTATTTCAGCGCATCCAGGAGAGCTTATCTGGCAATGGATACCCGATATTCCATATTGATAGCCCGTCCAGAAATGGGACGGGC 141 TTerm_0043 NC_003197.2 403169 403177 9 403187 403195 9 9 88 0 13 16 83 12 87 0 403181 CGCCGGGAG CTCCCGTCG True CATACTGTC TTTTCACGC False True + CGCCGGGAG CACGCCTTC CTCCCGTCG TTTTCACGC 66 STM0356 intergenic 403143 403326 + down ACACTACGCTCCTGGCGCATACTGTCGCCGGGAGCACGCCTTCCTCCCGTCGTTTTCACGCCCTTTCAACGAACAACAAAGGTTAATGATGGCATCTGCCGTTCGTGACCATTACAATCATCGCTTACTTTTTTCTTTATAAGAAATTGATTGCTGCACCTTAAAATTATCAACGGAGCGAAG GTCGGCCATCAGTCATCGCACGTAAACACTACGCTCCTGGCGCATACTGTCGCCGGGAGCACGCCTTCCTCCCGTCGTTTTCACGCCCTTTCAACGAACAACAAAGGTTAATGATGGCATCTGCCGTTCGTGACCATTACAATCATCGCTTACTTTTTTCTTTATAAGAAATTGATTGCTGCACCTTAAAATTATCAACGGAGCGAAGATATCATGTTGAAAGATAACCAAAA ACACTACGCTCCTGGCGCATACTGTCGCCGGGAGCACGCCTTCCTCCCGTCG 52 TTerm_0044 NC_003197.2 452876 452885 10 452890 452899 10 4 100 0 20 50 50 50 50 0 452887 ATAAGCCAGC GCTGGCTTAT True AACTTTCCA TTTCTTTGC False True + ATAAGCCAGC GGAT GCTGGCTTAT TTTCTTTGC 80 STM0398 intergenic 452850 453243 + down TTGCCTTTCGTAAGTATAACTTTCCATAAGCCAGCGGATGCTGGCTTATTTTCTTTGCAGTTAAGACGGGCTCGTTGAAACATTCAACGTTTGGTGGTTTTTTGTTCGCATGATTAGCCATAACTTTTTCATGAGAATGGTGTTTTATTCTGGTTGTAAATTTCATATCGCTATATTCATCTGGTTTTTAGATCCCACCTTGCTTTAAAACGTTATAAGCGTTTAAATTGCGCTTCAGGTGCTGTCATTACGACTGCATTTGCGCGGTAAATCGAAAAACAATTCTTCGCCGCATCGGTCCGGGAGCTTTTCCCGCTGAAATTGATAAAAAACGCCGCTTTATAATCCTCCGGGAAAGGCAAAAATTTTAATGTTTACAACATCACCATCCAC TTTAATTGCCAAAAATAGCGATTAATTGCCTTTCGTAAGTATAACTTTCCATAAGCCAGCGGATGCTGGCTTATTTTCTTTGCAGTTAAGACGGGCTCGTTGAAACATTCAACGTTTGGTGGTTTTTTGTTCGCATGATTAGCCATAACTTTTTCATGAGAATGGTGTTTTATTCTGGTTGTAAATTTCATATCGCTATATTCATCTGGTTTTTAGATCCCACCTTGCTTTAAAACGTTATAAGCGTTTAAATTGCGCTTCAGGTGCTGTCATTACGACTGCATTTGCGCGGTAAATCGAAAAACAATTCTTCGCCGCATCGGTCCGGGAGCTTTTCCCGCTGAAATTGATAAAAAACGCCGCTTTATAATCCTCCGGGAAAGGCAAAAATTTTAATGTTTACAACATCACCATCCACAGGCAGTAAGACTTTATGACCCATC TTGCCTTTCGTAAGTATAACTTTCCATAAGCCAGCGGATGCTGGCTTAT 49 TTerm_0045 NC_003197.2 454599 454608 10 454614 454623 10 5 100 0 20 20 80 20 80 0 454610 ACCACGGGGC GCCCCGTGGT True ATGTGTACA TTTTTATTG False True + ACCACGGGGC TTAAC GCCCCGTGGT TTTTTATTG 88 STM0399 intergenic 454578 454644 + down AATCGCTGACATATGTGTACACCACGGGGCTTAACGCCCCGTGGTTTTTTATTGTGTTGATAGGTC GCAGGTGACCTCCAGCGCTCACTAAAATCGCTGACATATGTGTACACCACGGGGCTTAACGCCCCGTGGTTTTTTATTGTGTTGATAGGTCAGAAATTGATGGAAAGCAATAATAA AATCGCTGACATATGTGTACACCACGGGGCTTAACGCCCCGTGGT 45 TTerm_0046 NC_003197.2 458034 458044 11 458049 458059 11 4 100 0 22 45 54 45 54 0 458046 AAAAGGCTCGC GCGAGCCTTTT True ACGCATAAA ATCAATGCA True True + AAAAGGCTCGC ATTC GCGAGCCTTTT ATCAATGCA 84 STM0401 intergenic 458002 458074 + down GGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTTATCAATGCACTGACT CGCGACGGTATGGATGAATCGTTGAGGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTTATCAATGCACTGACTTACAGGCTGGAAATGTTCTCAGCCA GGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTT 57 TTerm_0047 NC_003197.2 458034 458044 11 458049 458059 11 4 100 0 22 45 54 45 54 0 458046 AAAAGGCTCGC GCGAGCCTTTT True ACGCATAAA ATCAATGCA True True + AAAAGGCTCGC ATTC GCGAGCCTTTT ATCAATGCA 84 STM0402 intergenic 458002 458074 - down AGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTTTTTATGCGTAAGGTGTTACGAACCACCTCGCC TGGCTGAGAACATTTCCAGCCTGTAAGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTTTTTATGCGTAAGGTGTTACGAACCACCTCGCCTCAACGATTCATCCATACCGTCGCG GGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTT 57 TTerm_0048 NC_003197.2 458793 458802 10 458811 458820 10 8 90 0 15 55 45 55 44 0 458806 GGGTCATTAT ATGATGACCC True TATCGATCG TTTTATGAC False True + GGGTCATTAT AAATCGTA ATGATGACCC TTTTATGAC 46 STM0403 intergenic 458684 458886 - down ACGGCCTGATAGCGAGGGCGTGCGTCAGATCCGCCGTTGGCAGAAAGATCGTTCGCTGTCATAAAAGGGTCATCATTACGATTTATAATGACCCGATCGATAGGCAAAAGCTGTCTCATTGATTGTCAAGACCGCATTGTTTTGTCGCTTCGCCCTCCCTATACTGCCCGCGTTGCGTTCTAAAACCCTTAATATTGCAGGA CACAGGCCGCCCGCAAAGCGCTGTGACGGCCTGATAGCGAGGGCGTGCGTCAGATCCGCCGTTGGCAGAAAGATCGTTCGCTGTCATAAAAGGGTCATCATTACGATTTATAATGACCCGATCGATAGGCAAAAGCTGTCTCATTGATTGTCAAGACCGCATTGTTTTGTCGCTTCGCCCTCCCTATACTGCCCGCGTTGCGTTCTAAAACCCTTAATATTGCAGGAGAATTATTATGGTACTGGTTACTCG TCCTGCAATATTAAGGGTTTTAGAACGCAACGCGGGCAGTATAGGGAGGGCGAAGCGACAAAACAATGCGGTCTTGACAATCAATGAGACAGCTTTTGCCTATCGATCGGGTCATTATAAATCGTAATGATGACCC 136 TTerm_0049 NC_003197.2 465184 465193 10 465198 465207 10 4 90 0 15 45 55 44 55 0 465195 AATCCCGGTC GATCGGGATT True GTTATCTGA TTTTTATTT False True + AATCCCGGTC ATGC GATCGGGATT TTTTTATTT 62 STM0408 intergenic 465161 465301 + down ACACGTATTTAAGTGTTATCTGAATCCCGGTCATGCGATCGGGATTTTTTTATTTATGTACCATGACGATAAACATTACTGACAGTATGCTGTCAGGAGCCCTGTCATACACTCCTCATGAATTTACCCACACTCGCAGG GGATCAGCCGTCCATTCTGCCGTAAACACGTATTTAAGTGTTATCTGAATCCCGGTCATGCGATCGGGATTTTTTTATTTATGTACCATGACGATAAACATTACTGACAGTATGCTGTCAGGAGCCCTGTCATACACTCCTCATGAATTTACCCACACTCGCAGGAGGATGTATGAAAAACTTGATTAAC ACACGTATTTAAGTGTTATCTGAATCCCGGTCATGCGATCGGGATT 46 TTerm_0050 NC_003197.2 467504 467512 9 467517 467525 9 4 100 0 18 22 77 22 77 0 467514 GGCCAGAGG CCTCTGGCC True CCGAAACGG TTTTTTGCA False True + GGCCAGAGG ACGA CCTCTGGCC TTTTTTGCA 68 STM0413 intergenic 467483 467538 - down AACCTGCAAAAAAGGCCAGAGGTCGTCCTCTGGCCCGTTTCGGGCGCATGCTGCC ACCTGGTCGTGGGTTACAACTTCTAAACCTGCAAAAAAGGCCAGAGGTCGTCCTCTGGCCCGTTTCGGGCGCATGCTGCCATGCGGCGGCGAGTCGCGCCCACTT GGCAGCATGCGCCCGAAACGGGCCAGAGGACGACCTCTGGCC 42 TTerm_0051 NC_003197.2 493307 493319 13 493327 493339 13 7 100 0 26 53 46 53 46 0 493322 AAAAAACCGCCGT ACGGCGGTTTTTT True AATGGATAA CAATAGCAA True True + AAAAAACCGCCGT TTGTGAC ACGGCGGTTTTTT CAATAGCAA 92 STM0438 intergenic 493273 493355 + down CTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTTCAATAGCAACGCTTGT TTTACATATTATTCAGAATCGATAACTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTTCAATAGCAACGCTTGTTACCAGACGTAAGTCAGCAGATTCT CTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTT 66 TTerm_0052 NC_003197.2 493307 493319 13 493327 493339 13 7 100 0 26 53 46 53 46 0 493322 AAAAAACCGCCGT ACGGCGGTTTTTT True AATGGATAA CAATAGCAA True True + AAAAAACCGCCGT TTGTGAC ACGGCGGTTTTTT CAATAGCAA 92 STM0439 intergenic 493273 493355 - down ACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTTTTATCCATTTCATCAGGCAGTAACGCCCCACGAG AGAATCTGCTGACTTACGTCTGGTAACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTTTTATCCATTTCATCAGGCAGTAACGCCCCACGAGTTATCGATTCTGAATAATATGTAAA CTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTT 66 TTerm_0053 NC_003197.2 501376 501384 9 501389 501397 9 4 100 0 18 44 55 44 55 0 501386 AAAACGGCC GGCCGTTTT True ATTATGTGA GTTTTGTCT True True + AAAACGGCC TGCG GGCCGTTTT GTTTTGTCT 76 STM0446 intergenic 501319 501655 + down CAAAACGGATTTGCAACTACCTCCGCTTTTCCAGTATGTTGCTACAGAATTATGTGAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGAATTTTGAGCGTGTCGTACAGTATTCAGACAAAAATTAGCCGAGAATTGTGAAAACCGCCGCAGCATCGCACAATCACCGTTCTCGACTCACAAAAGTGATGCCGCTATAATGCGCCGTCTTATATATGAACGTCTTCGGGATGATTCTGACGACAGGGAATGTGATTGATTACGAGAACATCCCGGTTCCGCGAAGCAAATAGCACGTGCTTGCGGAGTAGAGTTGACCGAGCACTGTGATTTTTTG TCGCGGCGCGGGAAGCATCGCGTAGCAAAACGGATTTGCAACTACCTCCGCTTTTCCAGTATGTTGCTACAGAATTATGTGAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGAATTTTGAGCGTGTCGTACAGTATTCAGACAAAAATTAGCCGAGAATTGTGAAAACCGCCGCAGCATCGCACAATCACCGTTCTCGACTCACAAAAGTGATGCCGCTATAATGCGCCGTCTTATATATGAACGTCTTCGGGATGATTCTGACGACAGGGAATGTGATTGATTACGAGAACATCCCGGTTCCGCGAAGCAAATAGCACGTGCTTGCGGAGTAGAGTTGACCGAGCACTGTGATTTTTTGAGGTAACAAGATGCAAGTTTCAGTT CAAAACGGATTTGCAACTACCTCCGCTTTTCCAGTATGTTGCTACAGAATTATGTGAAAACGGCCTGCGGGCCGTTTT 78 TTerm_0054 NC_003197.2 502995 503007 13 503014 503026 13 6 100 0 26 53 46 53 46 0 503010 AAAAACCCGTCAC GTGACGGGTTTTT True ATTTGCACA TTTGTCACG True True + AAAAACCCGTCAC CTTTCA GTGACGGGTTTTT TTTGTCACG 84 STM0447 intergenic 502964 503199 + down TTTTTCGCGTTAAAAGCACGAAATTTGCACAAAAACCCGTCACCTTTCAGTGACGGGTTTTTTTTGTCACGTATTTTGCATGGTAAGGGTGCGAAAACCGCGTTTCAGTGTTAGCGTTAGAGCAAAAGATTGTTATGCTTGAATTATGGCGATGCCGTACCCATTACAGAGGGACTGGCTGATAATCCGTCCATCAGGTTACAATCAGTACAGCAGATTTTTTCAATTTTTATCC TGAGCTGATGAACCAGCAGGCGTAATTTTTCGCGTTAAAAGCACGAAATTTGCACAAAAACCCGTCACCTTTCAGTGACGGGTTTTTTTTGTCACGTATTTTGCATGGTAAGGGTGCGAAAACCGCGTTTCAGTGTTAGCGTTAGAGCAAAAGATTGTTATGCTTGAATTATGGCGATGCCGTACCCATTACAGAGGGACTGGCTGATAATCCGTCCATCAGGTTACAATCAGTACAGCAGATTTTTTCAATTTTTATCCAGGAGACGGAAATGTCATACAGCGG TTTTTCGCGTTAAAAGCACGAAATTTGCACAAAAACCCGTCACCTTTCAGTGACGGGTTTTT 62 TTerm_0055 NC_003197.2 510585 510593 9 510598 510606 9 4 100 0 18 33 66 33 66 0 510595 AAAGGCCGC GCGGCCTTT True TATCCCACA TCCATTTCT False True + AAAGGCCGC TTTC GCGGCCTTT TCCATTTCT 84 STM0452 intergenic 510540 510676 + down TCGTCGAGGCGCTTCGCAAAAAATTGCAAAACGTTGTATCCCACAAAGGCCGCTTTCGCGGCCTTTTCCATTTCTGAGAATTGCCGTTTGTTCGTTTTTCTCCGCCCCGCTATCGTGGCTGCACTGTTAACAAACA CGGCGACGCTCTGGAACAGCAGTAATCGTCGAGGCGCTTCGCAAAAAATTGCAAAACGTTGTATCCCACAAAGGCCGCTTTCGCGGCCTTTTCCATTTCTGAGAATTGCCGTTTGTTCGTTTTTCTCCGCCCCGCTATCGTGGCTGCACTGTTAACAAACAAGGAGAAAACAGTATGAAACACGGA TCGTCGAGGCGCTTCGCAAAAAATTGCAAAACGTTGTATCCCACAAAGGCCGCTTTCGCGGCCTTT 66 TTerm_0056 NC_003197.2 515067 515075 9 515081 515089 9 5 100 0 18 44 55 44 55 0 515077 AAGCCAGAC GTCTGGCTT True CTTCCAGCA TTTTTTGGT False True + AAGCCAGAC ATTCA GTCTGGCTT TTTTTTGGT 68 STM0457 intergenic 515051 515101 + down GAGATCTCTTCCAGCAAGCCAGACATTCAGTCTGGCTTTTTTTTGGTTTC GCATCTACCTTATTCCCCCGAATGAGAGATCTCTTCCAGCAAGCCAGACATTCAGTCTGGCTTTTTTTTGGTTTCTAGTCGCCGGTAAGTAATTTTGCGA GAGATCTCTTCCAGCAAGCCAGACATTCAGTCTGGCTT 38 TTerm_0057 NC_003197.2 515067 515075 9 515081 515089 9 5 100 0 18 44 55 44 55 0 515077 AAGCCAGAC GTCTGGCTT True CTTCCAGCA TTTTTTGGT False True + AAGCCAGAC ATTCA GTCTGGCTT TTTTTTGGT 68 STM0458 intergenic 515051 515101 - down GAAACCAAAAAAAAGCCAGACTGAATGTCTGGCTTGCTGGAAGAGATCTC TCGCAAAATTACTTACCGGCGACTAGAAACCAAAAAAAAGCCAGACTGAATGTCTGGCTTGCTGGAAGAGATCTCTCATTCGGGGGAATAAGGTAGATGC GAGATCTCTTCCAGCAAGCCAGACATTCAGTCTGGCTT 38 TTerm_0058 NC_003197.2 526785 526794 10 526801 526810 10 6 90 0 15 35 65 33 66 0 526797 AGTGCGTACC GGTGCGCACT True GGGAAAGCA TTTTTATTA False True + AGTGCGTACC AGGGAG GGTGCGCACT TTTTTATTA 70 STM0470 intergenic 526761 526817 + down AAAACCAACAGTTCAGGGAAAGCAGTGCGTACCAGGGAGGGTGCGCACTTTTTTAT TCAGGGGCGTAAAAAAAGACGTTAAAAAACCAACAGTTCAGGGAAAGCAGTGCGTACCAGGGAGGGTGCGCACTTTTTTATTACCGGCTGGCTTCTGCGCGGGCCA AAAACCAACAGTTCAGGGAAAGCAGTGCGTACCAGGGAGGGTGCGCACT 49 TTerm_0059 NC_003197.2 526785 526794 10 526801 526810 10 6 90 0 15 35 65 33 66 0 526797 AGTGCGTACC GGTGCGCACT True GGGAAAGCA TTTTTATTA False True + AGTGCGTACC AGGGAG GGTGCGCACT TTTTTATTA 70 STM0471 intergenic 526761 526817 - down ATAAAAAAGTGCGCACCCTCCCTGGTACGCACTGCTTTCCCTGAACTGTTGGTTTT TGGCCCGCGCAGAAGCCAGCCGGTAATAAAAAAGTGCGCACCCTCCCTGGTACGCACTGCTTTCCCTGAACTGTTGGTTTTTTAACGTCTTTTTTTACGCCCCTGA AAAACCAACAGTTCAGGGAAAGCAGTGCGTACCAGGGAGGGTGCGCACT 49 TTerm_0060 NC_003197.2 534417 534423 7 534428 534434 7 4 100 0 14 42 57 42 57 0 534425 TCCAGGA TCCTGGA True GATAATATT CATTTTCTG False True + TCCAGGA AAAC TCCTGGA CATTTTCTG 60 STM0477 intergenic 534410 534529 + down TAATATTCCAGGAAAACTCCTGGACATTTTCTGTGTCGCTATTCTGTTTGTTACAGGCGTGATATTCTTGCGACTCAATTATTTCCGGTCTGCTTGCCGGTTCAGACACTTCATTCTCA GTCGACGGTCAACGGCTCCCCCTGATAATATTCCAGGAAAACTCCTGGACATTTTCTGTGTCGCTATTCTGTTTGTTACAGGCGTGATATTCTTGCGACTCAATTATTTCCGGTCTGCTTGCCGGTTCAGACACTTCATTCTCATGACTATGTTGCAGCTTTATAAACG TAATATTCCAGGAAAACTCCTGGA 24 TTerm_0061 NC_003197.2 556061 556068 8 556073 556080 8 4 100 0 16 50 50 50 50 0 556070 GGCCAATA TATTGGCC True CTTTGACGG ATTTTTTTA False True + GGCCAATA GCGA TATTGGCC ATTTTTTTA 48 STM0496 intergenic 555895 556087 - down AAAAAATGGCCAATATCGCTATTGGCCCGTCAAAGAGGAATTTCATCGTTATTATTATCCCGACGCTTTCGCTTCGGATCTTCAGATTGTCGCTCAAAGTTGCCGCAACTGCCAAGACCTAATGCACAAGATTATACTATTTTTTAGTCCGCTTTCGGGCGTATGCTGATGGCAAATCACGTCTGTAGTAAG GCAACCTACCGCAAATATTGAAATAAAAAAATGGCCAATATCGCTATTGGCCCGTCAAAGAGGAATTTCATCGTTATTATTATCCCGACGCTTTCGCTTCGGATCTTCAGATTGTCGCTCAAAGTTGCCGCAACTGCCAAGACCTAATGCACAAGATTATACTATTTTTTAGTCCGCTTTCGGGCGTATGCTGATGGCAAATCACGTCTGTAGTAAGAAGGAACGTTATGACACCCGCAGTT CTTACTACAGACGTGATTTGCCATCAGCATACGCCCGAAAGCGGACTAAAAAATAGTATAATCTTGTGCATTAGGTCTTGGCAGTTGCGGCAACTTTGAGCGACAATCTGAAGATCCGAAGCGAAAGCGTCGGGATAATAATAACGATGAAATTCCTCTTTGACGGGCCAATAGCGATATTGGCC 185 TTerm_0062 NC_003197.2 557817 557827 11 557832 557842 11 4 90 0 17 86 13 90 10 0 557829 AAAAAAACATT AATGTTGTTTT True TATGATTCA TTATTTTTC True True + AAAAAAACATT ATAA AATGTTGTTTT TTATTTTTC 42 STM0498 intergenic 557800 557948 - down AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTG TATTGCGTTTTAAACCGAAAGCGTAAAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTGTTATTTATGTTTAGAAAAGCAGTTA CACATCCTTATGATTCAAAAAAACATTATAAAATGTTGTTTT 42 TTerm_0063 NC_003197.2 557828 557833 6 557841 557846 6 7 100 0 12 100 0 100 0 0 557836 ATAAAA TTTTAT True AAAACATTA TTTTCTACA True True + ATAAAA TGTTGTT TTTTAT TTTTCTACA 24 STM0498 intergenic 557800 557948 - down AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTG TATTGCGTTTTAAACCGAAAGCGTAAAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTGTTATTTATGTTTAGAAAAGCAGTTA CACATCCTTATGATTCAAAAAAACATTATAAAATGTTGTTTTTTAT 46 TTerm_0064 NC_003197.2 557912 557924 13 557929 557941 13 4 100 0 26 53 46 53 46 0 557926 TATATCAGGCAGC GCTGCCTGATATA True CTTAATAAT GCGTTTTTA False True + TATATCAGGCAGC TGAT GCTGCCTGATATA GCGTTTTTA 92 STM0498 intergenic 557800 557948 - down AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTG TATTGCGTTTTAAACCGAAAGCGTAAAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTGTTATTTATGTTTAGAAAAGCAGTTA CACATCCTTATGATTCAAAAAAACATTATAAAATGTTGTTTTTTATTTTTCTACAGGATGTGCGGTTAAATTTTTATATATTGATACGGTAAATTACTGATGGCTTAATAATATATCAGGCAGCTGATGCTGCCTGATATA 141 TTerm_0065 NC_003197.2 573675 573680 6 573690 573695 6 9 100 0 12 66 33 66 33 0 573684 GCAATA TATTGC True GTCAGCCGG GCTTTTAGC False True + GCAATA AAAGTAAGC TATTGC GCTTTTAGC 40 STM0512 intergenic 573650 573689 + down GCCGGCTCAATGTAGCGTCAGCCGGCAATAAAAGTAAGC TGCCGACAAGCGCGACAGACACTAAGCCGGCTCAATGTAGCGTCAGCCGGCAATAAAAGTAAGCTATTGCGCTTTTAGCCAGTTGGCAA GCCGGCTCAATGTAGCGTCAGCCGGCAATAAAAGTAAGCTATTGC 45 TTerm_0066 NC_003197.2 573675 573680 6 573690 573695 6 9 100 0 12 66 33 66 33 0 573684 GCAATA TATTGC True GTCAGCCGG GCTTTTAGC False True + GCAATA AAAGTAAGC TATTGC GCTTTTAGC 40 STM0513 intergenic 573650 573689 - down GCTTACTTTTATTGCCGGCTGACGCTACATTGAGCCGGC TTGCCAACTGGCTAAAAGCGCAATAGCTTACTTTTATTGCCGGCTGACGCTACATTGAGCCGGCTTAGTGTCTGTCGCGCTTGTCGGCA GCCGGCTCAATGTAGCGTCAGCCGGCAATAAAAGTAAGCTATTGC 45 TTerm_0067 NC_003197.2 577392 577399 8 577404 577411 8 4 100 0 16 25 75 25 75 0 577401 TCCCGCTC GAGCGGGA True GAGCCGCAT CTTTTTTAA False True + TCCCGCTC GCTG GAGCGGGA CTTTTTTAA 72 STM0516 intergenic 577385 577456 + down GCCGCATCCCGCTCGCTGGAGCGGGACTTTTTTAAAATTTTTAAAAGTTGGAAACTTTTTCCAATAAAAAG TGGGCTAAAACCCCCTGTAGCCTGAGCCGCATCCCGCTCGCTGGAGCGGGACTTTTTTAAAATTTTTAAAAGTTGGAAACTTTTTCCAATAAAAAGAGGTAGCAATAAAATGGCAAAAATG GCCGCATCCCGCTCGCTGGAGCGGGA 26 TTerm_0068 NC_003197.2 582333 582341 9 582349 582357 9 7 88 0 13 94 5 100 0 0 582344 AAATAATTA TAATTCTTT True CAGCTTAAA ATTTTATAT True True + AAATAATTA TATCTAC TAATTCTTT ATTTTATAT 34 STM0520 intergenic 582332 582408 + down AAATAATTATATCTACTAATTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGA AACGCAACGTATTGCTTCAGCTTAAAAATAATTATATCTACTAATTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGATGCGTGAAAAGAGGGATTTATGGAA AAATAATTATATCTACTAATTCTTT 25 TTerm_0069 NC_003197.2 600532 600545 14 600550 600563 14 4 92 0 23 46 53 46 53 0 600547 ACAGGCCGCTCTAT ATAGAACGGCCTGT True GCGCTTTTA TTTTTATTT False True + ACAGGCCGCTCTAT TTGC ATAGAACGGCCTGT TTTTTATTT 54 STM0537 intergenic 600523 600567 + down GCGCTTTTACAGGCCGCTCTATTTGCATAGAACGGCCTGTTTTT GGGCACCACCTGGCGACGTAAGTAAGCGCTTTTACAGGCCGCTCTATTTGCATAGAACGGCCTGTTTTTTATTTTTTCGCACCGGGCGAAAGAT GCGCTTTTACAGGCCGCTCTATTTGCATAGAACGGCCTGT 40 TTerm_0070 NC_003197.2 600532 600545 14 600550 600563 14 4 92 0 23 46 53 46 53 0 600547 ACAGGCCGCTCTAT ATAGAACGGCCTGT True GCGCTTTTA TTTTTATTT False True + ACAGGCCGCTCTAT TTGC ATAGAACGGCCTGT TTTTTATTT 54 STM0538 intergenic 600523 600567 - down AAAAACAGGCCGTTCTATGCAAATAGAGCGGCCTGTAAAAGCGC ATCTTTCGCCCGGTGCGAAAAAATAAAAAACAGGCCGTTCTATGCAAATAGAGCGGCCTGTAAAAGCGCTTACTTACGTCGCCAGGTGGTGCCC GCGCTTTTACAGGCCGCTCTATTTGCATAGAACGGCCTGT 40 TTerm_0071 NC_003197.2 617909 617920 12 617927 617938 12 6 91 0 19 54 45 54 45 0 617923 CAAAGCTTTGCA TGCAAGGCTTTG True GGGACACAC CATGTTTTT False True + CAAAGCTTTGCA TCGGCT TGCAAGGCTTTG CATGTTTTT 62 STM0560 intergenic 617725 618148 - down GTTATTTGCATATTAGCGTCACGTACTGCGGATGGCGCAACGTCGCCGCCGCAGAAGCTTACGGATTAACGTAATTTTGAGAGGTTAAATGGCGCGCCGTGCAGGATTCGAACCTGCGACCCACGGCTTAGATGTTCCTGGAACTACCTGAGCTAACAACAAGTTATCCCATTACTACGGCGCTCACTCGCCCCATCTTCGAAAAACATGCAAAGCCTTGCAAGCCGATGCAAAGCTTTGTGTGTCCCGTTTTTGTCCCAAACTACTTAGCAATCAGTAGCCCCAATTGATCGGTAACAACGATCAATTAATAAGATAACAATAACTTTAAACTATTGAATACCACATTATTGATCGTTTATATCGATCAAAGCAATTTGTAGTGCTACACTCCAGACCTTTCCGAATCCGCTGATTTTCATA ACCATAAACAGATTAAACGCAATTAGTTATTTGCATATTAGCGTCACGTACTGCGGATGGCGCAACGTCGCCGCCGCAGAAGCTTACGGATTAACGTAATTTTGAGAGGTTAAATGGCGCGCCGTGCAGGATTCGAACCTGCGACCCACGGCTTAGATGTTCCTGGAACTACCTGAGCTAACAACAAGTTATCCCATTACTACGGCGCTCACTCGCCCCATCTTCGAAAAACATGCAAAGCCTTGCAAGCCGATGCAAAGCTTTGTGTGTCCCGTTTTTGTCCCAAACTACTTAGCAATCAGTAGCCCCAATTGATCGGTAACAACGATCAATTAATAAGATAACAATAACTTTAAACTATTGAATACCACATTATTGATCGTTTATATCGATCAAAGCAATTTGTAGTGCTACACTCCAGACCTTTCCGAATCCGCTGATTTTCATAATGTTGAAGTTATTCGCTAAGTACA TATGAAAATCAGCGGATTCGGAAAGGTCTGGAGTGTAGCACTACAAATTGCTTTGATCGATATAAACGATCAATAATGTGGTATTCAATAGTTTAAAGTTATTGTTATCTTATTAATTGATCGTTGTTACCGATCAATTGGGGCTACTGATTGCTAAGTAGTTTGGGACAAAAACGGGACACACAAAGCTTTGCATCGGCTTGCAAGGCTTTG 213 TTerm_0072 NC_003197.2 621671 621677 7 621683 621689 7 5 100 0 14 28 71 28 71 0 621679 AGCCCTG CAGGGCT True AATAATATA TTTTTTTGC False True + AGCCCTG TTAAT CAGGGCT TTTTTTTGC 68 STM0564 intergenic 621656 621801 + down AACATAAATAATATAGCCCTGTTAATCAGGGCTTTTTTTTGCCTGTCAGACCATAAAAATACGCCAGGACAAATATGCTGGCGTCTGAAAGAAAAGGCTTTAGTCAGGCATAACGTATTATAACACCATTGAAATAACCCACGAC CGATCTCTTCTCTCTCATTAAGTAAAACATAAATAATATAGCCCTGTTAATCAGGGCTTTTTTTTGCCTGTCAGACCATAAAAATACGCCAGGACAAATATGCTGGCGTCTGAAAGAAAAGGCTTTAGTCAGGCATAACGTATTATAACACCATTGAAATAACCCACGACTGGAAATCTCGATGTTAAAAGTTAC AACATAAATAATATAGCCCTGTTAATCAGGGCT 33 TTerm_0073 NC_003197.2 692876 692881 6 692887 692892 6 5 100 0 12 50 50 50 50 0 692883 GACACA TGTGTC True TGGTATCCG TATTTTTCA False True + GACACA GCATT TGTGTC TATTTTTCA 48 STM0628 intergenic 692730 692906 + down TGGGGAAGGGTATGCTTCAGTTGTGAATTAAAAAGTCTTAAAAAACAATAAGTAGATAGAGTTAGCTAAAAATTAACGCGATATTTATCACTTTTTCGCAAAGTTCGACTGGACAAAATGCATCACAATTGTTGTACTGGTATCCGACACAGCATTTGTGTCTATTTTTCATGTAA CGCCTGGATGCGTTTCCAGTTTTGATGGGGAAGGGTATGCTTCAGTTGTGAATTAAAAAGTCTTAAAAAACAATAAGTAGATAGAGTTAGCTAAAAATTAACGCGATATTTATCACTTTTTCGCAAAGTTCGACTGGACAAAATGCATCACAATTGTTGTACTGGTATCCGACACAGCATTTGTGTCTATTTTTCATGTAAAGGTAATTTTGATGTCTAAGATTAA TGGGGAAGGGTATGCTTCAGTTGTGAATTAAAAAGTCTTAAAAAACAATAAGTAGATAGAGTTAGCTAAAAATTAACGCGATATTTATCACTTTTTCGCAAAGTTCGACTGGACAAAATGCATCACAATTGTTGTACTGGTATCCGACACAGCATTTGTGTC 162 TTerm_0074 NC_003197.2 693152 693161 10 693167 693176 10 5 100 0 20 40 60 40 60 0 693163 AAAACCCGCC GGCGGGTTTT True AAGATTTCA TTTTGCGCT True True + AAAACCCGCC CTTTC GGCGGGTTTT TTTTGCGCT 88 STM0629 intergenic 693127 693185 + down GCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTTTTTTGCGCT CGCTGCAAACGTAACTGCTCTGTAAGCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTTTTTTGCGCTTAACGCGCCGCTGCGGCGGAAAATA GCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTT 49 TTerm_0075 NC_003197.2 693152 693161 10 693167 693176 10 5 100 0 20 40 60 40 60 0 693163 AAAACCCGCC GGCGGGTTTT True AAGATTTCA TTTTGCGCT True True + AAAACCCGCC CTTTC GGCGGGTTTT TTTTGCGCT 88 STM0630 intergenic 693127 693185 - down AGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTTTGAAATCTTGCTGTCGGACGTATGC TATTTTCCGCCGCAGCGGCGCGTTAAGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTTTGAAATCTTGCTGTCGGACGTATGCTTACAGAGCAGTTACGTTTGCAGCG GCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTT 49 TTerm_0076 NC_003197.2 694807 694818 12 694824 694835 12 5 100 0 24 58 41 58 41 0 694820 AAAAAAACCGGC GCCGGTTTTTTT True CGCAGAGTA TGCCTGAAA True True + AAAAAAACCGGC GAGTT GCCGGTTTTTTT TGCCTGAAA 88 STM0632 intergenic 694779 694865 + down TTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTTTGCCTGAAATGTAAGCGTCTATTACACGAT TGAAAAACTCTCGCACAAAGAGTAATTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTTTGCCTGAAATGTAAGCGTCTATTACACGATCATTTCACTTCCATGCCTTTGGCCT TTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTT 56 TTerm_0077 NC_003197.2 694807 694818 12 694824 694835 12 5 100 0 24 58 41 58 41 0 694820 AAAAAAACCGGC GCCGGTTTTTTT True CGCAGAGTA TGCCTGAAA True True + AAAAAAACCGGC GAGTT GCCGGTTTTTTT TGCCTGAAA 88 STM0633 intergenic 694779 694865 - down ATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTTTACTCTGCGGAGCAAGCGCATCGCGCAA AGGCCAAAGGCATGGAAGTGAAATGATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTTTACTCTGCGGAGCAAGCGCATCGCGCAATTACTCTTTGTGCGAGAGTTTTTCA TTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTT 56 TTerm_0078 NC_003197.2 697251 697260 10 697270 697279 10 9 90 0 15 55 45 55 44 0 697264 TAATGACCCA TGGGCCATTA True TATATGATT TATTTTACG False True + TAATGACCCA TAAATTTCT TGGGCCATTA TATTTTACG 70 STM0635 intergenic 697002 697291 - down ATGCGTAAAATATAATGGCCCAAGAAATTTATGGGTCATTAATCATATATGATTTGAATGCTTTACTTCTCCCCCCGCTTTCTATATTTTCGTTATATCCCTGCTGTAGCCGCCAGGCGGCATGGCCTCTTCAGTCCTCATGATGAGGAATTTTCCGTGAACAAAATCCCGGCCTTGCTGTTACTTATCTTATTGAAATGACTAAAAATACATTCATAAGAGTAATTTTAAAACCAACCCATAAATGCAAAATATACTATTTCATCTATTATTCATAATACGAATGAAT CACCGTATGAATATATTGCTGCTTAATGCGTAAAATATAATGGCCCAAGAAATTTATGGGTCATTAATCATATATGATTTGAATGCTTTACTTCTCCCCCCGCTTTCTATATTTTCGTTATATCCCTGCTGTAGCCGCCAGGCGGCATGGCCTCTTCAGTCCTCATGATGAGGAATTTTCCGTGAACAAAATCCCGGCCTTGCTGTTACTTATCTTATTGAAATGACTAAAAATACATTCATAAGAGTAATTTTAAAACCAACCCATAAATGCAAAATATACTATTTCATCTATTATTCATAATACGAATGAATTCGGAGCCAGAGCGTGAGTGATAAT ATTCATTCGTATTATGAATAATAGATGAAATAGTATATTTTGCATTTATGGGTTGGTTTTAAAATTACTCTTATGAATGTATTTTTAGTCATTTCAATAAGATAAGTAACAGCAAGGCCGGGATTTTGTTCACGGAAAATTCCTCATCATGAGGACTGAAGAGGCCATGCCGCCTGGCGGCTACAGCAGGGATATAACGAAAATATAGAAAGCGGGGGGAGAAGTAAAGCATTCAAATCATATATGATTAATGACCCATAAATTTCTTGGGCCATTA 277 TTerm_0079 NC_003197.2 698327 698336 10 698341 698350 10 4 100 0 20 30 70 30 70 0 698338 AACTCCCGCC GGCGGGAGTT True AAAATAACA TTACTGATG True True + AACTCCCGCC ACAG GGCGGGAGTT TTACTGATG 88 STM0637 intergenic 698306 698404 - down AAAATTGAACGCTTGAAAGTGTGATTTTCGTCCCCATATACTATGCATCAGTAAAACTCCCGCCCTGTGGCGGGAGTTGTTATTTTTTTTACGTAATG TAATGTTCCATCACTGGTTTGGATAAAAATTGAACGCTTGAAAGTGTGATTTTCGTCCCCATATACTATGCATCAGTAAAACTCCCGCCCTGTGGCGGGAGTTGTTATTTTTTTTACGTAATGCCGGAGCTGACATGAAAACCAAACT CATTACGTAAAAAAAATAACAACTCCCGCCACAGGGCGGGAGTT 44 TTerm_0080 NC_003197.2 737980 737990 11 737995 738005 11 4 100 0 22 54 45 54 45 0 737992 AAAAAGCTCGC GCGAGCTTTTT True AGAAAAGCA AAAGGTGGC True True + AAAAAGCTCGC CGAA GCGAGCTTTTT AAAGGTGGC 84 STM0673 intergenic 737878 738014 - down GCCACCTTTAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTTATAAATTCCGAAAGAGGTTTCCCCCTTAATGCCCTGCTATCAGTAAAACGCTATGATAAAGCCTTACAGGGATCGTTCGGTAACCTC CCGAGGTTCGAATCCTCGTACCCCAGCCACCTTTAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTTATAAATTCCGAAAGAGGTTTCCCCCTTAATGCCCTGCTATCAGTAAAACGCTATGATAAAGCCTTACAGGGATCGTTCGGTAACCTCACAATGAATTACCAGTTTTGTTGGT GAGGTTACCGAACGATCCCTGTAAGGCTTTATCATAGCGTTTTACTGATAGCAGGGCATTAAGGGGGAAACCTCTTTCGGAATTTATAAACGCAGAAAAGCAAAAAGCTCGCCGAAGCGAGCTTTTT 127 TTerm_0081 NC_003197.2 749132 749139 8 749145 749152 8 5 100 0 16 25 75 25 75 0 749141 AACGCCGC GCGGCGTT True ACCTTGTCA TTTTCTCTG False True + AACGCCGC GTTCT GCGGCGTT TTTTCTCTG 80 STM0686 intergenic 749091 749525 + down GCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTTTTTTCTCTGCATTTCTAAGTCGATTCTCTTTTTTGCGAGGCGAATTAATTATTCTCTGAAAATTATTGATCTGATAAATGATTATTAATCTAAATGTTATAAGCGTCAGGTCAACAGGAGACAATTATTTTCATGCCTATGGAAAACAAGTCAATTTTCTTTCTGGCGGTCTGCTTCCCCCACCAGCAGTCGAATGTAACAGAAAGCAATTAAATATGTGCGGTTGCTCATATTATTACATACTGGTTACAGAAAGAGATTGATAATTCGCATCGCGAAAAATAGTCTATTTAACGTAGTAAATGAGGTTTCTCAGCGCTACTTTTTATTTTTTCGCTGTTCGCTTTTGTCGGCAGCAATTTATACGTCAAAG TACCTGGGCGAAAGCGGGCGAGTAAGCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTTTTTTCTCTGCATTTCTAAGTCGATTCTCTTTTTTGCGAGGCGAATTAATTATTCTCTGAAAATTATTGATCTGATAAATGATTATTAATCTAAATGTTATAAGCGTCAGGTCAACAGGAGACAATTATTTTCATGCCTATGGAAAACAAGTCAATTTTCTTTCTGGCGGTCTGCTTCCCCCACCAGCAGTCGAATGTAACAGAAAGCAATTAAATATGTGCGGTTGCTCATATTATTACATACTGGTTACAGAAAGAGATTGATAATTCGCATCGCGAAAAATAGTCTATTTAACGTAGTAAATGAGGTTTCTCAGCGCTACTTTTTATTTTTTCGCTGTTCGCTTTTGTCGGCAGCAATTTATACGTCAAAGAGGATTAACTTATGCGTACGTTTAG GCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTT 61 TTerm_0082 NC_003197.2 749277 749284 8 749294 749301 8 9 87 0 11 81 18 85 14 0 749288 TTATTTTC GAAAACAA True GGAGACAAT GTCAATTTT False True + TTATTTTC ATGCCTATG GAAAACAA GTCAATTTT 38 STM0686 intergenic 749091 749525 + down GCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTTTTTTCTCTGCATTTCTAAGTCGATTCTCTTTTTTGCGAGGCGAATTAATTATTCTCTGAAAATTATTGATCTGATAAATGATTATTAATCTAAATGTTATAAGCGTCAGGTCAACAGGAGACAATTATTTTCATGCCTATGGAAAACAAGTCAATTTTCTTTCTGGCGGTCTGCTTCCCCCACCAGCAGTCGAATGTAACAGAAAGCAATTAAATATGTGCGGTTGCTCATATTATTACATACTGGTTACAGAAAGAGATTGATAATTCGCATCGCGAAAAATAGTCTATTTAACGTAGTAAATGAGGTTTCTCAGCGCTACTTTTTATTTTTTCGCTGTTCGCTTTTGTCGGCAGCAATTTATACGTCAAAG TACCTGGGCGAAAGCGGGCGAGTAAGCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTTTTTTCTCTGCATTTCTAAGTCGATTCTCTTTTTTGCGAGGCGAATTAATTATTCTCTGAAAATTATTGATCTGATAAATGATTATTAATCTAAATGTTATAAGCGTCAGGTCAACAGGAGACAATTATTTTCATGCCTATGGAAAACAAGTCAATTTTCTTTCTGGCGGTCTGCTTCCCCCACCAGCAGTCGAATGTAACAGAAAGCAATTAAATATGTGCGGTTGCTCATATTATTACATACTGGTTACAGAAAGAGATTGATAATTCGCATCGCGAAAAATAGTCTATTTAACGTAGTAAATGAGGTTTCTCAGCGCTACTTTTTATTTTTTCGCTGTTCGCTTTTGTCGGCAGCAATTTATACGTCAAAGAGGATTAACTTATGCGTACGTTTAG GCACTGCGCCAACAGGCGAATGCTGTAAAAATACCTTGTCAACGCCGCGTTCTGCGGCGTTTTTTCTCTGCATTTCTAAGTCGATTCTCTTTTTTGCGAGGCGAATTAATTATTCTCTGAAAATTATTGATCTGATAAATGATTATTAATCTAAATGTTATAAGCGTCAGGTCAACAGGAGACAATTATTTTCATGCCTATGGAAAACAA 210 TTerm_0083 NC_003197.2 751342 751350 9 751360 751368 9 9 100 0 18 11 88 11 88 0 751354 CCACGGGCG CGCCCGTGG True CTTGCCACC TTTTTTCAG False True + CCACGGGCG AATGTTTTC CGCCCGTGG TTTTTTCAG 84 STM0688 intergenic 751325 751374 + down AACCCTGCCTTGCCACCCACGGGCGAATGTTTTCCGCCCGTGGTTTTTT TCGCAGTCATAATAACGTGCAATAAAACCCTGCCTTGCCACCCACGGGCGAATGTTTTCCGCCCGTGGTTTTTTCAGGCTTTATTTTCTGCCGCGATAT AACCCTGCCTTGCCACCCACGGGCGAATGTTTTCCGCCCGTGG 43 TTerm_0084 NC_003197.2 751342 751350 9 751360 751368 9 9 100 0 18 11 88 11 88 0 751354 CCACGGGCG CGCCCGTGG True CTTGCCACC TTTTTTCAG False True + CCACGGGCG AATGTTTTC CGCCCGTGG TTTTTTCAG 84 STM0689 intergenic 751325 751374 - down AAAAAACCACGGGCGGAAAACATTCGCCCGTGGGTGGCAAGGCAGGGTT ATATCGCGGCAGAAAATAAAGCCTGAAAAAACCACGGGCGGAAAACATTCGCCCGTGGGTGGCAAGGCAGGGTTTTATTGCACGTTATTATGACTGCGA AACCCTGCCTTGCCACCCACGGGCGAATGTTTTCCGCCCGTGG 43 TTerm_0085 NC_003197.2 758192 758206 15 758211 758225 15 4 80 0 15 20 80 8 91 0 758208 CAACGCCCGCGCGCG CGCGCACAGGCGATG True AGCGACGCC AGTTTTTAA False True + CAACGCCCGCGCGCG TAAT CGCGCACAGGCGATG AGTTTTTAA 70 STM0696 intergenic 758122 758239 - down ACTGATTAAAAACTCATCGCCTGTGCGCGATTACGCGCGCGGGCGTTGGCGTCGCTTCCTCGCTGATGTATGATGGCGCGCTATCCATCCGGGCATAAGCCTGGCTGATTGTTTCCC GCCGTTATCTGCACGATAAACGCTAACTGATTAAAAACTCATCGCCTGTGCGCGATTACGCGCGCGGGCGTTGGCGTCGCTTCCTCGCTGATGTATGATGGCGCGCTATCCATCCGGGCATAAGCCTGGCTGATTGTTTCCCCCGAAGTCACCAAAATCATGGCCAA GGGAAACAATCAGCCAGGCTTATGCCCGGATGGATAGCGCGCCATCATACATCAGCGAGGAAGCGACGCCAACGCCCGCGCGCGTAATCGCGCACAGGCGATG 103 TTerm_0086 NC_003197.2 761417 761427 11 761432 761442 11 4 100 0 22 54 45 54 45 0 761429 AAAAAGGAGCC GGCTCCTTTTT True TATGGAAGA TGTATTAAC True True + AAAAAGGAGCC TTAC GGCTCCTTTTT TGTATTAAC 84 STM0698 intergenic 761401 761516 + down TGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTTTGTATTAACGGCGCTGCGCTTATCAGGCCTGTAAACCGCCTCCAGGCCGGATAAGGCGCTTGTGATATCTGACT TAGCGAAGTATTGAAAAACGCCTGATGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTTTGTATTAACGGCGCTGCGCTTATCAGGCCTGTAAACCGCCTCCAGGCCGGATAAGGCGCTTGTGATATCTGACTTATTCGCTCTGAGTCGCCAGATGTC TGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTT 41 TTerm_0087 NC_003197.2 761417 761427 11 761432 761442 11 4 100 0 22 54 45 54 45 0 761429 AAAAAGGAGCC GGCTCCTTTTT True TATGGAAGA TGTATTAAC True True + AAAAAGGAGCC TTAC GGCTCCTTTTT TGTATTAAC 84 STM0699 intergenic 761401 761516 - down AGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTTTCTTCCATATCGCCCA GACATCTGGCGACTCAGAGCGAATAAGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTTTCTTCCATATCGCCCATCAGGCGTTTTTCAATACTTCGCTA TGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTT 41 TTerm_0088 NC_003197.2 774685 774697 13 774704 774716 13 6 92 0 21 50 50 50 50 0 774700 AAAAACCGTCAGC GCTGGCGGTTTTT True CCAGCCTGA TTATGCGCC True True + AAAAACCGTCAGC CGCCAC GCTGGCGGTTTTT TTATGCGCC 82 STM0708 intergenic 774670 774771 + down TCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTTTTATGCGCCAGGGTCTACACTGTTTAACGCTATTCGCCGTGACGTTTCATCTTTC AAAAGCCACCTGCGACTTTTATTAATCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTTTTATGCGCCAGGGTCTACACTGTTTAACGCTATTCGCCGTGACGTTTCATCTTTCAGGAGTTGTATGCCCACCCATTTAG TCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTT 46 TTerm_0089 NC_003197.2 812816 812832 17 812837 812853 17 4 94 0 29 73 26 75 25 0 812834 TAAAAATATAGGGGCTT AAGCCCATATATTTTTA True AACCTCCTT CTCTCCCTT True True + TAAAAATATAGGGGCTT GCAT AAGCCCATATATTTTTA CTCTCCCTT 90 STM0743 intergenic 812801 813018 + down ATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTACTCTCCCTTAACTTCCCCCCATTCCCAAGCCTCATTCCCACGCGTATAGTAGCAACGTTTAAAAGCTCTACTTTTGTTGCATTACCGGGATGTAAAGTGAATACAAGGCGATATACAACGGCATTCTTGAGGCATTACGGCGGCAAGCGGATGACGCCAACAAAG CGGCCTGATTTTCTTCTTCTTGTGAATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTACTCTCCCTTAACTTCCCCCCATTCCCAAGCCTCATTCCCACGCGTATAGTAGCAACGTTTAAAAGCTCTACTTTTGTTGCATTACCGGGATGTAAAGTGAATACAAGGCGATATACAACGGCATTCTTGAGGCATTACGGCGGCAAGCGGATGACGCCAACAAAGAGGCTGCAGGGATGAATAAGTATAT ATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTA 52 TTerm_0090 NC_003197.2 845519 845527 9 845534 845542 9 6 100 0 18 33 66 33 66 0 845530 AAACGCCCG CGGGCGTTT True ATTTCCCCA TTGTTACTC False True + AAACGCCCG CTCAGT CGGGCGTTT TTGTTACTC 84 STM0780 intergenic 845511 845608 + down TTTCCCCAAACGCCCGCTCAGTCGGGCGTTTTTGTTACTCAAGATCCTGCTTTTCCTGCCGATATTTTCTGTGTTTAATCGTTAATGGGTATGAATA AGACCAGTCCAGACAGAACCGCTGATTTCCCCAAACGCCCGCTCAGTCGGGCGTTTTTGTTACTCAAGATCCTGCTTTTCCTGCCGATATTTTCTGTGTTTAATCGTTAATGGGTATGAATAACCGCTGGGAAACCCCTGAGATTAT TTTCCCCAAACGCCCGCTCAGTCGGGCGTTT 31 TTerm_0091 NC_003197.2 854804 854812 9 854821 854829 9 8 88 0 13 72 27 75 25 0 854816 TGACACAAT ATTGTATCA True GTGATTGCT TTTTTGTTA False True + TGACACAAT ATAACAAA ATTGTATCA TTTTTGTTA 34 STM0789 intergenic 854775 854972 + down GCGGACTGCTGCCGGAAAACGTGATTGCTGACACAATATAACAAAATTGTATCATTTTTGTTAATTCTATTCTTGTGCTTACTTGTATAGACAAGTATATGTCTGATTCTTATCTGTGGGTCTGCGGCGGTGCCTGATAGTGGCGTTTTAGCGTTATTTGGCGATGGCAGACCGATAATAATGAGGAGTCATTGCTA GCTACAGGGACGATTTATCTCCTGAGCGGACTGCTGCCGGAAAACGTGATTGCTGACACAATATAACAAAATTGTATCATTTTTGTTAATTCTATTCTTGTGCTTACTTGTATAGACAAGTATATGTCTGATTCTTATCTGTGGGTCTGCGGCGGTGCCTGATAGTGGCGTTTTAGCGTTATTTGGCGATGGCAGACCGATAATAATGAGGAGTCATTGCTATGCCTGAAAGCAAGTATCGTCAGCA GCGGACTGCTGCCGGAAAACGTGATTGCTGACACAATATAACAAAATTGTATCA 54 TTerm_0092 NC_003197.2 863809 863816 8 863821 863828 8 4 100 0 16 37 62 37 62 0 863818 GCAGGATC GATCCTGC True GCCTTCTTG TGTTTTTTC False True + GCAGGATC AGAC GATCCTGC TGTTTTTTC 56 STM0797 intergenic 863785 864348 + down CTGCGCTTAAAAACTGCCTTCTTGCAGGATCAGACGATCCTGCTGTTTTTTCGCCAGACCTTCCTGACGTCGCCATGCTAAAAATGTGCAAAATGTGAGCGTCTACGCCTCAATTTTTCCCTTCTCGTTAGCCAATAATCTGCCAAAAATAGCGATAATTTTTTTTTATCGCCCGGCGAAAACGTCAGGAGCTGATTTTGCCAGGCGGCAGGGGATACGGGCTGGAAGCAGTTATCCACTATTCCTGTGGATAACCTTGTGTATTAGAGTTAGAAAACACAACGTAAGCGAGAGGCGACGCGGCCTGCGACTAAATTGGCGCGAAAGACGGCTTGAGAAAATATCCCTTTTCAGACAGCAAGTTATATAAAATCAATGGTTGTAAAGGAAGGGGGATACGTTGACATAAAACTTTCATCATCCGACTTGACAAATGTTAAAAAAGACTCTGGTCTGGGGATAACCAGCACACTGCTGGAATTTTACCCCGCGACTGTCTATGTTTTACCTCTAAATAGCGTGGGGTATCTGCCGATAGCCATTATACACTGGAGTGTTACTGT CTGCGCTTAAAAACTGCCTTCTTGCAGGATCAGACGATCCTGC 43 TTerm_0093 NC_003197.2 863930 863935 6 863943 863948 6 7 100 0 12 100 0 100 0 0 863938 AAAAAT ATTTTT True AATCTGCCA TTTTATCGC False True + AAAAAT AGCGATA ATTTTT TTTTATCGC 24 STM0797 intergenic 863785 864348 + down CTGCGCTTAAAAACTGCCTTCTTGCAGGATCAGACGATCCTGCTGTTTTTTCGCCAGACCTTCCTGACGTCGCCATGCTAAAAATGTGCAAAATGTGAGCGTCTACGCCTCAATTTTTCCCTTCTCGTTAGCCAATAATCTGCCAAAAATAGCGATAATTTTTTTTTATCGCCCGGCGAAAACGTCAGGAGCTGATTTTGCCAGGCGGCAGGGGATACGGGCTGGAAGCAGTTATCCACTATTCCTGTGGATAACCTTGTGTATTAGAGTTAGAAAACACAACGTAAGCGAGAGGCGACGCGGCCTGCGACTAAATTGGCGCGAAAGACGGCTTGAGAAAATATCCCTTTTCAGACAGCAAGTTATATAAAATCAATGGTTGTAAAGGAAGGGGGATACGTTGACATAAAACTTTCATCATCCGACTTGACAAATGTTAAAAAAGACTCTGGTCTGGGGATAACCAGCACACTGCTGGAATTTTACCCCGCGACTGTCTATGTTTTACCTCTAAATAGCGTGGGGTATCTGCCGATAGCCATTATACACTGGAGTGTTACTGT CTGCGCTTAAAAACTGCCTTCTTGCAGGATCAGACGATCCTGCTGTTTTTTCGCCAGACCTTCCTGACGTCGCCATGCTAAAAATGTGCAAAATGTGAGCGTCTACGCCTCAATTTTTCCCTTCTCGTTAGCCAATAATCTGCCAAAAATAGCGATAATTTTT 163 TTerm_0094 NC_003197.2 874112 874122 11 874128 874138 11 5 100 0 22 54 45 54 45 0 874124 AAAATCCTGGC GCCAGGATTTT True GATCTCTTA TTTTAGGAC True True + AAAATCCTGGC CCTGC GCCAGGATTTT TTTTAGGAC 84 STM0807 intergenic 874096 874243 + down TTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTTTTTTAGGACTATATTTAGGGCGAAACAGCATAAATATCTTAGAAATGTTTTCCTACGCTTGCCATTCTTATCACCGTGATCATGTGAAGAGTGATAAATGACAAG GCGTATTTTTGGTAATCGCCGCTAATTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTTTTTTAGGACTATATTTAGGGCGAAACAGCATAAATATCTTAGAAATGTTTTCCTACGCTTGCCATTCTTATCACCGTGATCATGTGAAGAGTGATAAATGACAAGTGGGACCTCTGGCTGCAATACGTAT TTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTT 42 TTerm_0095 NC_003197.2 900070 900080 11 900087 900097 11 6 100 0 22 54 45 54 45 0 900083 AAAAATCCGCC GGCGGATTTTT True TGAAAATGA TTTGCCTGA True True + AAAAATCCGCC TTTCGG GGCGGATTTTT TTTGCCTGA 84 STM0833 intergenic 900052 900115 + down TCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTTTTTGCCTGAAACGTGCAT TGCTGGCGTAGGTTACCGCTTCTAATCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTTTTTGCCTGAAACGTGCATTATTTTAGTGAAAAAATATCGCTGC TCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTT 45 TTerm_0096 NC_003197.2 900070 900080 11 900087 900097 11 6 100 0 22 54 45 54 45 0 900083 AAAAATCCGCC GGCGGATTTTT True TGAAAATGA TTTGCCTGA True True + AAAAATCCGCC TTTCGG GGCGGATTTTT TTTGCCTGA 84 STM0834 intergenic 900052 900115 - down ATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTTTCATTTTCACCGACGTGA GCAGCGATATTTTTTCACTAAAATAATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTTTCATTTTCACCGACGTGATTAGAAGCGGTAACCTACGCCAGCA TCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTT 45 TTerm_0097 NC_003197.2 930172 930179 8 930186 930193 8 6 87 0 11 62 37 71 28 0 930182 TGGCTATA TATAGGCA True TTGATAACT CCTTTTTCT False True + TGGCTATA TAGTCT TATAGGCA CCTTTTTCT 38 STM0857 intergenic 929886 930328 + down TGTCAAATCAATTGGAAAAATATTATGAAACAGTTACCTCTGTCCGGAGTCATTATAGTCTCGATTGAACATGTCATTGCCACTCCCTTCTGTACCCGACAGTTGGCTGATTATTTCTCGCGGGTAACTATAATAGAATGCCAAGAAAACAGGGACTTTTCCTGCAATTATGATGAACGGCTTAAAAATGATTTGTGTATATTCTTTTTCATCTGAGGGAGAAAGCTAAATATAAATGTTATGGAATGCTTCATCATCATCGACATTTTTTTAATAGTTGATAACTGGCTATATAGTCTTATAGGCACCTTTTTCTAAGGTTGAACATTCCTATACCATTTCATCTGTTTTATCACTATGATATTTATTTCATTGGTTACAATATGAATGCAATTTTATTTACATAATATAGCTGTTCCTACGGTGCTGAAAAATTAAGGAG GCTGGAGATGCCACGTTCATTCTGATGTCAAATCAATTGGAAAAATATTATGAAACAGTTACCTCTGTCCGGAGTCATTATAGTCTCGATTGAACATGTCATTGCCACTCCCTTCTGTACCCGACAGTTGGCTGATTATTTCTCGCGGGTAACTATAATAGAATGCCAAGAAAACAGGGACTTTTCCTGCAATTATGATGAACGGCTTAAAAATGATTTGTGTATATTCTTTTTCATCTGAGGGAGAAAGCTAAATATAAATGTTATGGAATGCTTCATCATCATCGACATTTTTTTAATAGTTGATAACTGGCTATATAGTCTTATAGGCACCTTTTTCTAAGGTTGAACATTCCTATACCATTTCATCTGTTTTATCACTATGATATTTATTTCATTGGTTACAATATGAATGCAATTTTATTTACATAATATAGCTGTTCCTACGGTGCTGAAAAATTAAGGAGTTAATAATGAACGATACACTTTCTA TGTCAAATCAATTGGAAAAATATTATGAAACAGTTACCTCTGTCCGGAGTCATTATAGTCTCGATTGAACATGTCATTGCCACTCCCTTCTGTACCCGACAGTTGGCTGATTATTTCTCGCGGGTAACTATAATAGAATGCCAAGAAAACAGGGACTTTTCCTGCAATTATGATGAACGGCTTAAAAATGATTTGTGTATATTCTTTTTCATCTGAGGGAGAAAGCTAAATATAAATGTTATGGAATGCTTCATCATCATCGACATTTTTTTAATAGTTGATAACTGGCTATATAGTCTTATAGGCA 307 TTerm_0098 NC_003197.2 952559 952565 7 952571 952577 7 5 100 0 14 14 85 14 85 0 952567 TGCCGCG CGCGGCA True CAATGCGTT TCATTTTCA False True + TGCCGCG CGGGT CGCGGCA TCATTTTCA 76 STM0880 intergenic 952526 952585 + down AGCCACTAAAATCTTCCACTATGGCAATGCGTTGCCGCGCGGGTCGCGGCATCATTTTC TATCCAGCGTGCAAGACGCGGCTGAAGCCACTAAAATCTTCCACTATGGCAATGCGTTGCCGCGCGGGTCGCGGCATCATTTTCAGGGAAGACATTCATTGGGATTTAT AGCCACTAAAATCTTCCACTATGGCAATGCGTTGCCGCGCGGGTCGCGGCA 51 TTerm_0099 NC_003197.2 965309 965317 9 965326 965334 9 8 88 0 13 55 44 62 37 0 965321 AACCGGATT AATCCGCTT True GCCTGGATA TTTTCGGGA False True + AACCGGATT GATGCTGA AATCCGCTT TTTTCGGGA 50 STM0896 intergenic 964890 965344 - down ATCCCGAAAAAAGCGGATTTCAGCATCAATCCGGTTATCCAGGCGAAATATCTCAGTTATCCGGAGAAGATGTTTGGTCGCGAGCGGAAATTTATTCCCGTGCAACTGCAGCCGTCCGGCGAACATGGCGCGGTACGTTTTCAGTTCGATCCGGTTATTAACACGACTTACGGCAATCCTGAATTCGTTGTGATGCGCTGCCGTGATAATGCAATCAAAGTTATTGGGGAGCATCTGGGATGAAAATCGAATATCAGGACTACGGTGCCGTGGCGAACATCATCATCACCAGCACTGTGTTTGAGTTCCGGAAACATAACCGCGTGGTTGATGCTGCCCTGCTCTGCACACCAGGAATAGTTGCAAACCGTAGTGGAATGTTCTTCATGAAGACGGTTTTGTCCGGTAAATCCCGCGACATGCTGCGTGCGCACAAAACAGTATCGCGGGAGGC ACTTTTTCCGGATATGGAGCGAGTGATCCCGAAAAAAGCGGATTTCAGCATCAATCCGGTTATCCAGGCGAAATATCTCAGTTATCCGGAGAAGATGTTTGGTCGCGAGCGGAAATTTATTCCCGTGCAACTGCAGCCGTCCGGCGAACATGGCGCGGTACGTTTTCAGTTCGATCCGGTTATTAACACGACTTACGGCAATCCTGAATTCGTTGTGATGCGCTGCCGTGATAATGCAATCAAAGTTATTGGGGAGCATCTGGGATGAAAATCGAATATCAGGACTACGGTGCCGTGGCGAACATCATCATCACCAGCACTGTGTTTGAGTTCCGGAAACATAACCGCGTGGTTGATGCTGCCCTGCTCTGCACACCAGGAATAGTTGCAAACCGTAGTGGAATGTTCTTCATGAAGACGGTTTTGTCCGGTAAATCCCGCGACATGCTGCGTGCGCACAAAACAGTATCGCGGGAGGCGACACGATGAACGTGCTCAAACAAC GCCTCCCGCGATACTGTTTTGTGCGCACGCAGCATGTCGCGGGATTTACCGGACAAAACCGTCTTCATGAAGAACATTCCACTACGGTTTGCAACTATTCCTGGTGTGCAGAGCAGGGCAGCATCAACCACGCGGTTATGTTTCCGGAACTCAAACACAGTGCTGGTGATGATGATGTTCGCCACGGCACCGTAGTCCTGATATTCGATTTTCATCCCAGATGCTCCCCAATAACTTTGATTGCATTATCACGGCAGCGCATCACAACGAATTCAGGATTGCCGTAAGTCGTGTTAATAACCGGATCGAACTGAAAACGTACCGCGCCATGTTCGCCGGACGGCTGCAGTTGCACGGGAATAAATTTCCGCTCGCGACCAAACATCTTCTCCGGATAACTGAGATATTTCGCCTGGATAACCGGATTGATGCTGAAATCCGCTT 444 TTerm_0100 NC_003197.2 974324 974343 20 974350 974369 20 6 80 0 20 67 32 68 31 0 974346 ATTAATTCTAAATCACCCGC GCGGGTTTTTTATGATTAAT True TGTTGATTA CTTGTATTC False True + ATTAATTCTAAATCACCCGC CACCGT GCGGGTTTTTTATGATTAAT CTTGTATTC 80 STM0903 intergenic 974222 974377 + down TGTAATCGGAACAAATGGCGACAAGTTTTTGCACGATAAGGTTGACTTTGCATAAACTTGTCCTGTATGCTTCTAATCATGCAGAGTTACGCCTGTTGATTATTAATTCTAAATCACCCGCCACCGTGCGGGTTTTTTATGATTAATCTTGTATT ATTTGAGAAGGCAACAGCTTATTGATGTAATCGGAACAAATGGCGACAAGTTTTTGCACGATAAGGTTGACTTTGCATAAACTTGTCCTGTATGCTTCTAATCATGCAGAGTTACGCCTGTTGATTATTAATTCTAAATCACCCGCCACCGTGCGGGTTTTTTATGATTAATCTTGTATTCATGTTTCTTTAAGCTTGTTACGTT TGTAATCGGAACAAATGGCGACAAGTTTTTGCACGATAAGGTTGACTTTGCATAAACTTGTCCTGTATGCTTCTAATCATGCAGAGTTACGCCTGTTGATTATTAATTCTAAATCACCCGCCACCGTGCGGGTTTTTTATGATTAAT 147 TTerm_0101 NC_003197.2 974324 974343 20 974350 974369 20 6 80 0 20 67 32 68 31 0 974346 ATTAATTCTAAATCACCCGC GCGGGTTTTTTATGATTAAT True TGTTGATTA CTTGTATTC False True + ATTAATTCTAAATCACCCGC CACCGT GCGGGTTTTTTATGATTAAT CTTGTATTC 80 STM0904 intergenic 974222 974377 - down AATACAAGATTAATCATAAAAAACCCGCACGGTGGCGGGTGATTTAGAATTAATAATCAACAGGCGTAACTCTGCATGATTAGAAGCATACAGGACAAGTTTATGCAAAGTCAACCTTATCGTGCAAAAACTTGTCGCCATTTGTTCCGATTACA AACGTAACAAGCTTAAAGAAACATGAATACAAGATTAATCATAAAAAACCCGCACGGTGGCGGGTGATTTAGAATTAATAATCAACAGGCGTAACTCTGCATGATTAGAAGCATACAGGACAAGTTTATGCAAAGTCAACCTTATCGTGCAAAAACTTGTCGCCATTTGTTCCGATTACATCAATAAGCTGTTGCCTTCTCAAAT TGTAATCGGAACAAATGGCGACAAGTTTTTGCACGATAAGGTTGACTTTGCATAAACTTGTCCTGTATGCTTCTAATCATGCAGAGTTACGCCTGTTGATTATTAATTCTAAATCACCCGCCACCGTGCGGGTTTTTTATGATTAAT 147 TTerm_0102 NC_003197.2 976738 976746 9 976751 976759 9 4 100 0 18 55 44 55 44 0 976748 AAAGGCTAC GTAGCCTTT True CTTAAATCA TCTTTTTCC False True + AAAGGCTAC TTCG GTAGCCTTT TCTTTTTCC 68 STM0905 intergenic 976225 976808 + down TGTTTATAAAATGATATTTTGAATGGGCGCTGTTTTTTTGCAAAATTTTTGTGAAAAAATACTGACCTTTGGGCTCAACGCTCATTCAAAATTTACCTGATACTTCGTGTAGCTCCGCTGGTAACGCGGCGGTGGTCCATCGTTACAGGGCAAATTTCAGGCGAAAAAAAACGCCAAGGGAAGTGGCGGGCAGTAAATACTGAATTTGAAAAAAAGCTACTTCATCATCATTAGCAGGGGAGTCTGAACACTTGACCTGGTTATGCAGACATCAACACCTTGCCTGACTTCATCGGTTAAGTTAAACGGATAAATCTCAAATAAACCATGTAAACCACAGTGTTATTATGCAGGTGTTGCGGTGAATCCCGTTAGCACGGGGCAAATTGATCATCTACTTTTGTTAATCAACGTTGCAGCAGACATGAGCGCCGCGAGTCATGGCTGATCAACCAAAGGCTCACCGGGTAGCGATCGGCACTGCAGCACCTACTCTACCCATTACTTAAATCAAAGGCTACTTCGGTAGCCTTTTCTTTTTCCACTCACCCGATACCCGGGTAATTAGTCTCCCGGACAGGGG TGTTTATAAAATGATATTTTGAATGGGCGCTGTTTTTTTGCAAAATTTTTGTGAAAAAATACTGACCTTTGGGCTCAACGCTCATTCAAAATTTACCTGATACTTCGTGTAGCTCCGCTGGTAACGCGGCGGTGGTCCATCGTTACAGGGCAAATTTCAGGCGAAAAAAAACGCCAAGGGAAGTGGCGGGCAGTAAATACTGAATTTGAAAAAAAGCTACTTCATCATCATTAGCAGGGGAGTCTGAACACTTGACCTGGTTATGCAGACATCAACACCTTGCCTGACTTCATCGGTTAAGTTAAACGGATAAATCTCAAATAAACCATGTAAACCACAGTGTTATTATGCAGGTGTTGCGGTGAATCCCGTTAGCACGGGGCAAATTGATCATCTACTTTTGTTAATCAACGTTGCAGCAGACATGAGCGCCGCGAGTCATGGCTGATCAACCAAAGGCTCACCGGGTAGCGATCGGCACTGCAGCACCTACTCTACCCATTACTTAAATCAAAGGCTACTTCGGTAGCCTTT 534 TTerm_0103 NC_003197.2 992216 992223 8 992229 992236 8 5 100 0 16 87 12 87 12 0 992225 CTTTTTAA TTAAAAAG True AAAATGTGC GAGTTTTCA True True + CTTTTTAA GTATT TTAAAAAG GAGTTTTCA 32 STM0919 intergenic 992118 992238 + down GATATCAATATGTTAAGTATTCTCCGTTTAGTATCGGTTTAGTTTTATTGAGGAACCATAGGGCTGTAAAGGAATCTATCAGTCTGCACAAAATGTGCTTTTTAAGTATTTTAAAAAGGA CACGTTTGAACAGGTTGTCGTTTAGGATATCAATATGTTAAGTATTCTCCGTTTAGTATCGGTTTAGTTTTATTGAGGAACCATAGGGCTGTAAAGGAATCTATCAGTCTGCACAAAATGTGCTTTTTAAGTATTTTAAAAAGGAGTTTTCATGAAGCAGGTTCTCATTG GATATCAATATGTTAAGTATTCTCCGTTTAGTATCGGTTTAGTTTTATTGAGGAACCATAGGGCTGTAAAGGAATCTATCAGTCTGCACAAAATGTGCTTTTTAAGTATTTTAAAAAG 118 TTerm_0104 NC_003197.2 992763 992771 9 992779 992787 9 7 88 0 13 100 0 100 0 0 992774 ATTATTATT AATATTAAT True AGTTTCTGA TTTTCCGTA False True + ATTATTATT GCAATTT AATATTAAT TTTTCCGTA 26 STM0920 intergenic 992763 992889 + down TTATTATTGCAATTTAATATTAATTTTTCCGTACTATGTAAACCCTCCGATGCGAGGGTTTTTTGTAAGCTCCTTTGGGGCGTAATCAATGCCACTTGCTATGCACGTGGTTTTTTTTTACGGGAG ATTGGGTGTGGGGTATAGTTTCTGATTATTATTGCAATTTAATATTAATTTTTCCGTACTATGTAAACCCTCCGATGCGAGGGTTTTTTGTAAGCTCCTTTGGGGCGTAATCAATGCCACTTGCTATGCACGTGGTTTTTTTTTACGGGAGAGGTCATGCGGGACATTCCACAGGA TTATTATTGCAATTTAATATTAAT 24 TTerm_0105 NC_003197.2 992803 992810 8 992817 992824 8 6 100 0 16 50 50 50 50 0 992813 AAACCCTC GAGGGTTT True TACTATGTA TTTGTAAGC False True + AAACCCTC CGATGC GAGGGTTT TTTGTAAGC 64 STM0920 intergenic 992763 992889 + down TTATTATTGCAATTTAATATTAATTTTTCCGTACTATGTAAACCCTCCGATGCGAGGGTTTTTTGTAAGCTCCTTTGGGGCGTAATCAATGCCACTTGCTATGCACGTGGTTTTTTTTTACGGGAG ATTGGGTGTGGGGTATAGTTTCTGATTATTATTGCAATTTAATATTAATTTTTCCGTACTATGTAAACCCTCCGATGCGAGGGTTTTTTGTAAGCTCCTTTGGGGCGTAATCAATGCCACTTGCTATGCACGTGGTTTTTTTTTACGGGAGAGGTCATGCGGGACATTCCACAGGA TTATTATTGCAATTTAATATTAATTTTTCCGTACTATGTAAACCCTCCGATGCGAGGGTTT 61 TTerm_0106 NC_003197.2 999036 999044 9 999050 999058 9 5 88 0 13 38 61 37 62 0 999046 AAGAGCCGC GCGGCTTTT True AAATCATTA TTTATGGAG False True + AAGAGCCGC GTAAA GCGGCTTTT TTTATGGAG 66 STM0925 intergenic 999029 999067 + down ATCATTAAGAGCCGCGTAAAGCGGCTTTTTTTATGGAG CACTGCAGGGATTCGTATCAGTTAAATCATTAAGAGCCGCGTAAAGCGGCTTTTTTTATGGAGGCAATATGCCAGTACTTATTTCCGG ATCATTAAGAGCCGCGTAAAGCGGCTTTT 29 TTerm_0107 NC_003197.2 1021744 1021755 12 1021761 1021772 12 5 100 0 24 50 50 50 50 0 1021757 AAAATGCCAGCC GGCTGGCATTTT True GTTAAATAA GCCTCCTGG True True + AAAATGCCAGCC GATCG GGCTGGCATTTT GCCTCCTGG 88 STM0942 intergenic 1021675 1021805 + down TCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTTGCCTCCTGGATGTACACAATGAGACAGAGGAGC GGTGGATGCGCTGGCAAGGGAGTAATCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTTGCCTCCTGGATGTACACAATGAGACAGAGGAGCTATGCAACGGCCTCTGCTTCGATGG TCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTT 97 TTerm_0108 NC_003197.2 1021744 1021755 12 1021761 1021772 12 5 100 0 24 50 50 50 50 0 1021757 AAAATGCCAGCC GGCTGGCATTTT True GTTAAATAA GCCTCCTGG True True + AAAATGCCAGCC GATCG GGCTGGCATTTT GCCTCCTGG 88 STM0943 intergenic 1021675 1021805 - down GCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTTTTATTTAACGCCAGTGCCTGGTGGCGACACTGTTGCATCTTATCAGGCCGACAAATGACGTCAGCAAGA CCATCGAAGCAGAGGCCGTTGCATAGCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTTTTATTTAACGCCAGTGCCTGGTGGCGACACTGTTGCATCTTATCAGGCCGACAAATGACGTCAGCAAGATTACTCCCTTGCCAGCGCATCCACC TCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTT 97 TTerm_0109 NC_003197.2 1024998 1025006 9 1025013 1025021 9 6 100 0 18 33 66 33 66 0 1025009 AAACCGGGC GCCCGGTTT True TGTCGTACA TTTTGTCTA False True + AAACCGGGC CTTAGC GCCCGGTTT TTTTGTCTA 84 STM0945 intergenic 1024977 1025026 + down TCTTCGTTTCACTGTCGTACAAACCGGGCCTTAGCGCCCGGTTTTTTTG GCACAAGCCGGAAGCCGCGCACTAATCTTCGTTTCACTGTCGTACAAACCGGGCCTTAGCGCCCGGTTTTTTTGTCTATGGAAAACCCCCAGCTAGGCT TCTTCGTTTCACTGTCGTACAAACCGGGCCTTAGCGCCCGGTTT 44 TTerm_0110 NC_003197.2 1037296 1037308 13 1037313 1037325 13 4 84 0 16 30 69 27 72 0 1037310 CAACAGTGCCGGG CCCGGTGCTGTTG True CCATACAGC TCCGTTTTA False True + CAACAGTGCCGGG GCAA CCCGGTGCTGTTG TCCGTTTTA 72 STM0959 intergenic 1037239 1037360 + down CACGGAACAGGTGCAAAATCGCTGTAGTTTGATTACACTCCTGTTAATCCATACAGCAACAGTGCCGGGGCAACCCGGTGCTGTTGTCCGTTTTAGCATCGGGCGGGAAAAGCCTGGAACC TCGTCTGGTTATTAAGACACGCTAACACGGAACAGGTGCAAAATCGCTGTAGTTTGATTACACTCCTGTTAATCCATACAGCAACAGTGCCGGGGCAACCCGGTGCTGTTGTCCGTTTTAGCATCGGGCGGGAAAAGCCTGGAACCTGGAGAGCCTTTTTTGAGCCAGGAA CACGGAACAGGTGCAAAATCGCTGTAGTTTGATTACACTCCTGTTAATCCATACAGCAACAGTGCCGGGGCAACCCGGTGCTGTTG 86 TTerm_0111 NC_003197.2 1043728 1043747 20 1043753 1043772 20 5 75 0 15 62 37 73 26 0 1043749 AATACAATCAGAGGCGATCA TGATCGCGTTTCCTTTTATT True CGTTCATCA ATTCGATAA False True + AATACAATCAGAGGCGATCA TCAAT TGATCGCGTTTCCTTTTATT ATTCGATAA 54 STM0962 intergenic 1043536 1043785 + down TGTAAACGTTGCGGTAAGGTTATCTCTAAATATGATGCTCCAGGTATCATGGCGTTGATGATGAATCTCGTTATGCCTGATAGCACGTTGCTTATGAGGTCCGCGGGTATAGCGCAATGGATGCGTTGTTGCTGTCGTCGGTCTGGTAAGGCGAAAACGTCGCTATTACGTAAACGCGGTTTACGTTCATCAATACAATCAGAGGCGATCATCAATTGATCGCGTTTCCTTTTATTATTCGATAAGCAC TAGCCCCACAAAACGCTACCGCTAGTGTAAACGTTGCGGTAAGGTTATCTCTAAATATGATGCTCCAGGTATCATGGCGTTGATGATGAATCTCGTTATGCCTGATAGCACGTTGCTTATGAGGTCCGCGGGTATAGCGCAATGGATGCGTTGTTGCTGTCGTCGGTCTGGTAAGGCGAAAACGTCGCTATTACGTAAACGCGGTTTACGTTCATCAATACAATCAGAGGCGATCATCAATTGATCGCGTTTCCTTTTATTATTCGATAAGCACAGGATAAGCATGCTCGATCCCAATC TGTAAACGTTGCGGTAAGGTTATCTCTAAATATGATGCTCCAGGTATCATGGCGTTGATGATGAATCTCGTTATGCCTGATAGCACGTTGCTTATGAGGTCCGCGGGTATAGCGCAATGGATGCGTTGTTGCTGTCGTCGGTCTGGTAAGGCGAAAACGTCGCTATTACGTAAACGCGGTTTACGTTCATCAATACAATCAGAGGCGATCATCAATTGATCGCGTTTCCTTTTATT 236 TTerm_0112 NC_003197.2 1045108 1045117 10 1045122 1045131 10 4 100 0 20 50 50 50 50 0 1045119 AAAAAGCGCC GGCGCTTTTT True CCTCTTCTA TTATGCCAG True True + AAAAAGCGCC TTCG GGCGCTTTTT TTATGCCAG 80 STM0963 intergenic 1045087 1045269 + down TCCTCGCTTTCTCCTCTTCTAAAAAGCGCCTTCGGGCGCTTTTTTTATGCCAGTTTGATACCGGACAATAATCCCTACCCTATTAGGGGTAATACTGATTTCGAATGAAGGTCAGTTTTTAACACTATTTTTCTACTTTTTCGATATATATCAGACTTTATAGCGATGCTATCGCTATATAA GAACGGACTGGAATATATCGGCTAATCCTCGCTTTCTCCTCTTCTAAAAAGCGCCTTCGGGCGCTTTTTTTATGCCAGTTTGATACCGGACAATAATCCCTACCCTATTAGGGGTAATACTGATTTCGAATGAAGGTCAGTTTTTAACACTATTTTTCTACTTTTTCGATATATATCAGACTTTATAGCGATGCTATCGCTATATAAAATTCTATACATCGTTTTATTGTTT TCCTCGCTTTCTCCTCTTCTAAAAAGCGCCTTCGGGCGCTTTTT 44 TTerm_0113 NC_003197.2 1052415 1052421 7 1052431 1052437 7 9 100 0 14 14 85 14 85 0 1052425 GGCGCTC GAGCGCC True TTTTCCACG TTTTAAGGT False True + GGCGCTC CTGTCAGGC GAGCGCC TTTTAAGGT 68 STM0969 intergenic 1052398 1052691 + down CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTTACAGGTGCCTGGGTTCCAGGCGGAGACCACGGTATTAACAGGCGCCGGGGGCAGCAATAGTTGTCAGACCTTCAACCCAGCAGCAGATAAGCGACTCTGTATTTAATACCTGGTTAGCGCAATATTGTTAACCATGCCTGTCTGATGGCGGGGTCGGGTATTTTAGCGGTAAGAGCGTTATCCAGACAGCAAAACGGCTACCGTCATGGGTAGCCGTTTAAAAGCGGGTAAGATAGCAGGCGAT ACTGCTGGCGCGTAGAAACACATAACGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTTACAGGTGCCTGGGTTCCAGGCGGAGACCACGGTATTAACAGGCGCCGGGGGCAGCAATAGTTGTCAGACCTTCAACCCAGCAGCAGATAAGCGACTCTGTATTTAATACCTGGTTAGCGCAATATTGTTAACCATGCCTGTCTGATGGCGGGGTCGGGTATTTTAGCGGTAAGAGCGTTATCCAGACAGCAAAACGGCTACCGTCATGGGTAGCCGTTTAAAAGCGGGTAAGATAGCAGGCGATTAATACATCACTTTATGACCATACT CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCC 39 TTerm_0114 NC_003197.2 1052415 1052421 7 1052431 1052437 7 9 100 0 14 14 85 14 85 0 1052425 GGCGCTC GAGCGCC True TTTTCCACG TTTTAAGGT False True + GGCGCTC CTGTCAGGC GAGCGCC TTTTAAGGT 68 STM0970 intergenic 1052398 1052691 - down ATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTTTTGCTGTCTGGATAACGCTCTTACCGCTAAAATACCCGACCCCGCCATCAGACAGGCATGGTTAACAATATTGCGCTAACCAGGTATTAAATACAGAGTCGCTTATCTGCTGCTGGGTTGAAGGTCTGACAACTATTGCTGCCCCCGGCGCCTGTTAATACCGTGGTCTCCGCCTGGAACCCAGGCACCTGTAACCTTAAAAGGCGCTCGCCTGACAGGAGCGCCGTGGAAAAGAGCGTCG AGTATGGTCATAAAGTGATGTATTAATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTTTTGCTGTCTGGATAACGCTCTTACCGCTAAAATACCCGACCCCGCCATCAGACAGGCATGGTTAACAATATTGCGCTAACCAGGTATTAAATACAGAGTCGCTTATCTGCTGCTGGGTTGAAGGTCTGACAACTATTGCTGCCCCCGGCGCCTGTTAATACCGTGGTCTCCGCCTGGAACCCAGGCACCTGTAACCTTAAAAGGCGCTCGCCTGACAGGAGCGCCGTGGAAAAGAGCGTCGTTATGTGTTTCTACGCGCCAGCAGT CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCC 39 TTerm_0115 NC_003197.2 1055033 1055044 12 1055051 1055062 12 6 91 0 19 54 45 54 45 0 1055047 AAAAAGGCCCCA TGGAGCCTTTTT True AAGTCATTA TGTACGCTT True True + AAAAAGGCCCCA CTGATA TGGAGCCTTTTT TGTACGCTT 70 STM0972 intergenic 1055023 1055099 + down AAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTTTGTACGCTTTTTATGGCGTAATTTCAGTCAAACCCAT GAGTTGTCGCAATATGCTTATATAAAAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTTTGTACGCTTTTTATGGCGTAATTTCAGTCAAACCCATTACATGGTCTGCGTGAAGGTACGAG AAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTT 39 TTerm_0116 NC_003197.2 1055033 1055044 12 1055051 1055062 12 6 91 0 19 54 45 54 45 0 1055047 AAAAAGGCCCCA TGGAGCCTTTTT True AAGTCATTA TGTACGCTT True True + AAAAAGGCCCCA CTGATA TGGAGCCTTTTT TGTACGCTT 70 STM0973 intergenic 1055023 1055099 - down ATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTTTAATGACTTT CTCGTACCTTCACGCAGACCATGTAATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTTTAATGACTTTTTATATAAGCATATTGCGACAACTC AAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTT 39 TTerm_0117 NC_003197.2 1062584 1062589 6 1062599 1062604 6 9 100 0 12 16 83 16 83 0 1062593 CCCCAC GTGGGG True TTTTTCATC TTTTTATTT False True + CCCCAC GGCCAGTCT GTGGGG TTTTTATTT 64 STM0977 intergenic 1062566 1062637 + down TACGTTTCTTTTTTCATCCCCACGGCCAGTCTGTGGGGTTTTTATTTCTGTTTTTTGAGAGTTGAGTTTCA CGATTTTGAGCGTCGCCACGGCTAATACGTTTCTTTTTTCATCCCCACGGCCAGTCTGTGGGGTTTTTATTTCTGTTTTTTGAGAGTTGAGTTTCATGGAATCCCTGACGTTACAACCCAT TACGTTTCTTTTTTCATCCCCACGGCCAGTCTGTGGGG 38 TTerm_0118 NC_003197.2 1064013 1064019 7 1064026 1064032 7 6 100 0 14 71 28 71 28 0 1064022 AACACAT ATGTGTT True GATGATTTA TTTTATAAT False True + AACACAT TGATTT ATGTGTT TTTTATAAT 44 STM0978 intergenic 1063920 1064050 + down GTCTTCTGTTGCGCCAGTCGACGGGCTGGCGCGCCGAGTCCGTATTCGCACTATTTTTATAATTATGACTAATGCTAATTTGTTGATGATTTAACACATTGATTTATGTGTTTTTTATAATAGTTATCAA GGCGCGAATGAGTACGCCTGCCTAAGTCTTCTGTTGCGCCAGTCGACGGGCTGGCGCGCCGAGTCCGTATTCGCACTATTTTTATAATTATGACTAATGCTAATTTGTTGATGATTTAACACATTGATTTATGTGTTTTTTATAATAGTTATCAACGGAAGATTAGTATGAAAAATAAAT GTCTTCTGTTGCGCCAGTCGACGGGCTGGCGCGCCGAGTCCGTATTCGCACTATTTTTATAATTATGACTAATGCTAATTTGTTGATGATTTAACACATTGATTTATGTGTT 112 TTerm_0119 NC_003197.2 1067931 1067942 12 1067948 1067959 12 5 100 0 24 58 41 58 41 0 1067944 GAAAAAAGCACC GGTGCTTTTTTC True TTGAACCCG ATTTATACG True True + GAAAAAAGCACC GTCAG GGTGCTTTTTTC ATTTATACG 80 STM0982 intergenic 1067907 1068128 + down GTTTTAACGCAAAACTTGAACCCGAAAAAAGCACCGTCAGGGTGCTTTTTTCATTTATACGCCGTCAGGCGCAAACGCTATTCGACCGAAAACTGGAAAACGTTTCGCATTTTTTGCTGCGTCTTACATTTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTTTCCCGCACAGGG CGATCGCGCCAATATTTACGGTTAAGTTTTAACGCAAAACTTGAACCCGAAAAAAGCACCGTCAGGGTGCTTTTTTCATTTATACGCCGTCAGGCGCAAACGCTATTCGACCGAAAACTGGAAAACGTTTCGCATTTTTTGCTGCGTCTTACATTTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTTTCCCGCACAGGGAGGTGTCTATGAAGATAACGACGGT GTTTTAACGCAAAACTTGAACCCGAAAAAAGCACCGTCAGGGTGCTTTTTTC 52 TTerm_0120 NC_003197.2 1084790 1084795 6 1084800 1084805 6 4 100 0 12 0 100 0 100 0 1084797 GGCGGC GCCGCC True TAGCCTGGG TTTTTCTTT False True + GGCGGC GAAA GCCGCC TTTTTCTTT 72 STM0994 intergenic 1084678 1085010 + down ATACGGCAGAAACGATGACGTGCCTGATGGCGCCTCGTTTATCAGGCAAGGCCGGATAAGTCGGTTACGCCGCCATCCGGCACAACAAGTTCTGTTTTATCATTAGCCTGGGGCGGCGAAAGCCGCCTTTTTCTTTATCTGAAAAATCTCTCCGGGTAGTGCATTTTCTTTAAACTTCTTTACATTAGGTTAGGCAAAAACGTAACGAACTTTATATACTGGAGTTAAGCCTGACGAGTGAGCAGGCTGACTCGTCATACTAAACAAAAGCATTGGTTGCGGTTGACCCGCGCTGCGGGCAGCGCAGTCATGCGGAGTATGATAACGAAAAC AGATACGCCTTCAGAAGCGAGTTAAATACGGCAGAAACGATGACGTGCCTGATGGCGCCTCGTTTATCAGGCAAGGCCGGATAAGTCGGTTACGCCGCCATCCGGCACAACAAGTTCTGTTTTATCATTAGCCTGGGGCGGCGAAAGCCGCCTTTTTCTTTATCTGAAAAATCTCTCCGGGTAGTGCATTTTCTTTAAACTTCTTTACATTAGGTTAGGCAAAAACGTAACGAACTTTATATACTGGAGTTAAGCCTGACGAGTGAGCAGGCTGACTCGTCATACTAAACAAAAGCATTGGTTGCGGTTGACCCGCGCTGCGGGCAGCGCAGTCATGCGGAGTATGATAACGAAAACAGGGGGCAAGGGATGTTGCTTAATA ATACGGCAGAAACGATGACGTGCCTGATGGCGCCTCGTTTATCAGGCAAGGCCGGATAAGTCGGTTACGCCGCCATCCGGCACAACAAGTTCTGTTTTATCATTAGCCTGGGGCGGCGAAAGCCGCC 127 TTerm_0121 NC_003197.2 1089731 1089741 11 1089746 1089756 11 4 100 0 22 63 36 63 36 0 1089743 AAAAACAGGAC GTCCTGTTTTT True AGAGATAAA GAGGCATAA True True + AAAAACAGGAC CGAA GTCCTGTTTTT GAGGCATAA 76 STM0999 intergenic 1089612 1089784 - down ATCAGCAGACCCCTTTGTTTTATGCCTCAAAAACAGGACTTCGGTCCTGTTTTTTTATCTCTCTTAGAGAAAATGTGCGTCTTTCAAAAACAGGCGGGCTTTTTAGCGCTAACGGTTGGCATTTTGTAAATCTGCCGTTAACCTGATAGCGGATTTCCCTTCTGTAACTATA CTGTCGGTATTACTTACCAGTTCTGATCAGCAGACCCCTTTGTTTTATGCCTCAAAAACAGGACTTCGGTCCTGTTTTTTTATCTCTCTTAGAGAAAATGTGCGTCTTTCAAAAACAGGCGGGCTTTTTAGCGCTAACGGTTGGCATTTTGTAAATCTGCCGTTAACCTGATAGCGGATTTCCCTTCTGTAACTATAATGGAACCTCGTCATGTTTGAGAAC TATAGTTACAGAAGGGAAATCCGCTATCAGGTTAACGGCAGATTTACAAAATGCCAACCGTTAGCGCTAAAAAGCCCGCCTGTTTTTGAAAGACGCACATTTTCTCTAAGAGAGATAAAAAAACAGGACCGAAGTCCTGTTTTT 144 TTerm_0122 NC_003197.2 1091065 1091073 9 1091082 1091090 9 8 88 0 13 94 5 100 0 0 1091077 AAATAATAT ATGTTATTT True TCAAAAGGA TTACGGAAC True True + AAATAATAT GTAAACAA ATGTTATTT TTACGGAAC 34 STM1000 intergenic 1090975 1091482 - down ATTTTTACGTCACACTCAAGGCCAGCTATGCTGGCCTTTTTTTTCGCCTGAATGTCAGTTTTATTATCAATAAGTAAATAAAATTAATTACAACCCTCTGAATTACCACATCTTGTTACTGTATATTTCACGAAAATATTTACACATAAAAATTAATCCTTAATTTTATTGCGGATTAGATTTTTCTGCTCTAATAGCACAATTTTTCACCACAATTTCAGACATCCAGACTTCTAAATGGCTATTTTTATGAAATAGCTCGTCAGCTGCTTTTTCAGGCACAACGGTGTCGCGAACAAATAAATTCAATAAAATCATGGATATAAAAGAAAAACGATCAAATCAAAACGATAACTCAGGGGAAGTTTGACGTTGTTCACAAAGTTCCGTAAAAATAACATTTGTTTACATATTATTTCCTTTTGAAACCAAATCTTTATCTTTGTAGCACTTTCACGGTAGCGAAACGTTAGTTTGAATGGAAAGATGCCTGTCAGACACATAAAG GGACCCCACGCAACGCCAGCTTCTGATTTTTACGTCACACTCAAGGCCAGCTATGCTGGCCTTTTTTTTCGCCTGAATGTCAGTTTTATTATCAATAAGTAAATAAAATTAATTACAACCCTCTGAATTACCACATCTTGTTACTGTATATTTCACGAAAATATTTACACATAAAAATTAATCCTTAATTTTATTGCGGATTAGATTTTTCTGCTCTAATAGCACAATTTTTCACCACAATTTCAGACATCCAGACTTCTAAATGGCTATTTTTATGAAATAGCTCGTCAGCTGCTTTTTCAGGCACAACGGTGTCGCGAACAAATAAATTCAATAAAATCATGGATATAAAAGAAAAACGATCAAATCAAAACGATAACTCAGGGGAAGTTTGACGTTGTTCACAAAGTTCCGTAAAAATAACATTTGTTTACATATTATTTCCTTTTGAAACCAAATCTTTATCTTTGTAGCACTTTCACGGTAGCGAAACGTTAGTTTGAATGGAAAGATGCCTGTCAGACACATAAAGACACCAAACTCTCATCAATATTTCT CTTTATGTGTCTGACAGGCATCTTTCCATTCAAACTAACGTTTCGCTACCGTGAAAGTGCTACAAAGATAAAGATTTGGTTTCAAAAGGAAATAATATGTAAACAAATGTTATTT 115 TTerm_0123 NC_003197.2 1109136 1109141 6 1109149 1109154 6 7 100 0 12 33 66 33 66 0 1109144 AACCCG CGGGTT True TGAATGTGA TTCTTTTAT False True + AACCCG CCGAGTA CGGGTT TTCTTTTAT 56 STM1018 intergenic 1109016 1109302 + down ATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGG AATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTAT ATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTT 138 TTerm_0124 NC_003197.2 1109167 1109173 7 1109178 1109184 7 4 100 0 14 28 71 28 71 0 1109175 AACCCGC GCGGGTT True TTTATCTGA TTTTGCCTA False True + AACCCGC TGCG GCGGGTT TTTTGCCTA 68 STM1018 intergenic 1109016 1109302 + down ATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGG AATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTAT ATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTT 168 TTerm_0125 NC_003197.2 1129974 1129982 9 1129989 1129997 9 6 88 0 13 44 55 37 62 0 1129985 AATGCCCTC GAGGGCTTT True ACAGATTTA TTTATGGGT False True + AATGCCCTC CAGTGA GAGGGCTTT TTTATGGGT 66 STM1043 intergenic 1129924 1130041 + down GTGCTTGGCGTAGGTTACAGCTTCTGACCTTTAACATCGATACAGATTTAATGCCCTCCAGTGAGAGGGCTTTTTTATGGGTAAAACGAAATTATGACGATATGGCTATGTTGCTGT CAGTGACGTCAAAGCTGGAACCTAGGTGCTTGGCGTAGGTTACAGCTTCTGACCTTTAACATCGATACAGATTTAATGCCCTCCAGTGAGAGGGCTTTTTTATGGGTAAAACGAAATTATGACGATATGGCTATGTTGCTGTTATTTCTCAATGACACCACAGGCAA GTGCTTGGCGTAGGTTACAGCTTCTGACCTTTAACATCGATACAGATTTAATGCCCTCCAGTGAGAGGGCTTT 73 TTerm_0126 NC_003197.2 1129974 1129982 9 1129989 1129997 9 6 88 0 13 44 55 37 62 0 1129985 AATGCCCTC GAGGGCTTT True ACAGATTTA TTTATGGGT False True + AATGCCCTC CAGTGA GAGGGCTTT TTTATGGGT 66 STM1044 intergenic 1129924 1130041 - down ACAGCAACATAGCCATATCGTCATAATTTCGTTTTACCCATAAAAAAGCCCTCTCACTGGAGGGCATTAAATCTGTATCGATGTTAAAGGTCAGAAGCTGTAACCTACGCCAAGCAC TTGCCTGTGGTGTCATTGAGAAATAACAGCAACATAGCCATATCGTCATAATTTCGTTTTACCCATAAAAAAGCCCTCTCACTGGAGGGCATTAAATCTGTATCGATGTTAAAGGTCAGAAGCTGTAACCTACGCCAAGCACCTAGGTTCCAGCTTTGACGTCACTG GTGCTTGGCGTAGGTTACAGCTTCTGACCTTTAACATCGATACAGATTTAATGCCCTCCAGTGAGAGGGCTTT 73 TTerm_0127 NC_003197.2 1157394 1157405 12 1157413 1157424 12 7 91 0 19 37 62 36 63 0 1157408 AACCGCTTCAGG CCTGAGGCGGTT True GTAAATTTA TTTTTATTT False True + AACCGCTTCAGG TCGTGCG CCTGAGGCGGTT TTTTTATTT 70 STM1065 intergenic 1157373 1157615 + down GATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTTTTTTTATTTTTGACGCCGGAAAAATAGTTGTTATGGCTCACATTTTTTGTACAAATGATTTACCGTATAGCTCACAAATATGACATTGGTGTGAATTTTGCGCATTGACGGGCGATCCATTTAGAGGTATTCGTGTAGTGTGATTGCACATTTTGTAATCACTGTTTTCTTTTCCACCAGATACAAATATG AGATGAGATAAAGCGCCTTCCCTGAGATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTTTTTTTATTTTTGACGCCGGAAAAATAGTTGTTATGGCTCACATTTTTTGTACAAATGATTTACCGTATAGCTCACAAATATGACATTGGTGTGAATTTTGCGCATTGACGGGCGATCCATTTAGAGGTATTCGTGTAGTGTGATTGCACATTTTGTAATCACTGTTTTCTTTTCCACCAGATACAAATATGAGGGAAACGAGGCATGAAGAGACAA GATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTT 51 TTerm_0128 NC_003197.2 1157564 1157572 9 1157578 1157586 9 5 88 0 13 61 38 62 37 0 1157574 GTGATTGCA TGTAATCAC True CGTGTAGTG TGTTTTCTT False True + GTGATTGCA CATTT TGTAATCAC TGTTTTCTT 34 STM1065 intergenic 1157373 1157615 + down GATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTTTTTTTATTTTTGACGCCGGAAAAATAGTTGTTATGGCTCACATTTTTTGTACAAATGATTTACCGTATAGCTCACAAATATGACATTGGTGTGAATTTTGCGCATTGACGGGCGATCCATTTAGAGGTATTCGTGTAGTGTGATTGCACATTTTGTAATCACTGTTTTCTTTTCCACCAGATACAAATATG AGATGAGATAAAGCGCCTTCCCTGAGATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTTTTTTTATTTTTGACGCCGGAAAAATAGTTGTTATGGCTCACATTTTTTGTACAAATGATTTACCGTATAGCTCACAAATATGACATTGGTGTGAATTTTGCGCATTGACGGGCGATCCATTTAGAGGTATTCGTGTAGTGTGATTGCACATTTTGTAATCACTGTTTTCTTTTCCACCAGATACAAATATGAGGGAAACGAGGCATGAAGAGACAA GATAAAAGTAATGTAAATTTAACCGCTTCAGGTCGTGCGCCTGAGGCGGTTTTTTTATTTTTGACGCCGGAAAAATAGTTGTTATGGCTCACATTTTTTGTACAAATGATTTACCGTATAGCTCACAAATATGACATTGGTGTGAATTTTGCGCATTGACGGGCGATCCATTTAGAGGTATTCGTGTAGTGTGATTGCACATTTTGTAATCAC 213 TTerm_0129 NC_003197.2 1170318 1170331 14 1170340 1170353 14 8 92 0 23 57 42 53 46 0 1170335 TTTAAATGGCCGGA TCCGGCCTTTTAAA True AATAAAAGT TACAATCAG True True + TTTAAATGGCCGGA TATCGCTT TCCGGCCTTTTAAA TACAATCAG 86 STM1078 intergenic 1170314 1170359 + down AAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAATACAAT CCCTCGCCTGGGGCTGGCGAAATAAAAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAATACAATCAGTTACGTAGTCGCGGCGCCTGAA AAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAA 39 TTerm_0130 NC_003197.2 1170318 1170331 14 1170340 1170353 14 8 92 0 23 57 42 53 46 0 1170335 TTTAAATGGCCGGA TCCGGCCTTTTAAA True AATAAAAGT TACAATCAG True True + TTTAAATGGCCGGA TATCGCTT TCCGGCCTTTTAAA TACAATCAG 86 STM1079 intergenic 1170314 1170359 - down ATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAAACTT TTCAGGCGCCGCGACTACGTAACTGATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAAACTTTTATTTCGCCAGCCCCAGGCGAGGG AAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAA 39 TTerm_0131 NC_003197.2 1175406 1175416 11 1175421 1175431 11 4 90 0 17 40 59 40 60 0 1175418 AAGGGGTTACC GGTAGCCCCTT True GATTAAACA TGTTTTTTT False True + AAGGGGTTACC GAAA GGTAGCCCCTT TGTTTTTTT 66 STM1086 intergenic 1175393 1175536 + down GCCAGATTAAACAAGGGGTTACCGAAAGGTAGCCCCTTTGTTTTTTTAGGCGCTATAGAATATAGTTAGAAAATACTGTTAGAATATTTCCCGAAAAAACGGACTACGCGAGTCTTTAGTTTCTTTTCGTTTCCCGATGTGTC CCAGAGTTCGAATCTCTGCGCTTCCGCCAGATTAAACAAGGGGTTACCGAAAGGTAGCCCCTTTGTTTTTTTAGGCGCTATAGAATATAGTTAGAAAATACTGTTAGAATATTTCCCGAAAAAACGGACTACGCGAGTCTTTAGTTTCTTTTCGTTTCCCGATGTGTCTATTTATTGAAGATGTAGACCATTC GCCAGATTAAACAAGGGGTTACCGAAAGGTAGCCCCTT 38 TTerm_0132 NC_003197.2 1175406 1175416 11 1175421 1175431 11 4 90 0 17 40 59 40 60 0 1175418 AAGGGGTTACC GGTAGCCCCTT True GATTAAACA TGTTTTTTT False True + AAGGGGTTACC GAAA GGTAGCCCCTT TGTTTTTTT 66 STM1087 intergenic 1175393 1175536 - down GACACATCGGGAAACGAAAAGAAACTAAAGACTCGCGTAGTCCGTTTTTTCGGGAAATATTCTAACAGTATTTTCTAACTATATTCTATAGCGCCTAAAAAAACAAAGGGGCTACCTTTCGGTAACCCCTTGTTTAATCTGGC GAATGGTCTACATCTTCAATAAATAGACACATCGGGAAACGAAAAGAAACTAAAGACTCGCGTAGTCCGTTTTTTCGGGAAATATTCTAACAGTATTTTCTAACTATATTCTATAGCGCCTAAAAAAACAAAGGGGCTACCTTTCGGTAACCCCTTGTTTAATCTGGCGGAAGCGCAGAGATTCGAACTCTGG GCCAGATTAAACAAGGGGTTACCGAAAGGTAGCCCCTT 38 TTerm_0133 NC_003197.2 1232093 1232105 13 1232110 1232122 13 4 100 0 26 61 38 61 38 0 1232107 AAAAAAACAGGGC GCCCTGTTTTTTT True GCGCTAATA TCGGGAGGA True True + AAAAAAACAGGGC ATAA GCCCTGTTTTTTT TCGGGAGGA 92 STM1144 intergenic 1232074 1232127 + down TTTAGCGTCTGCGCTAATAAAAAAACAGGGCATAAGCCCTGTTTTTTTTCGGG CAACGCCACGGCTAACCAGTATTAATTTAGCGTCTGCGCTAATAAAAAAACAGGGCATAAGCCCTGTTTTTTTTCGGGAGGAAATTATGCATACTTTATTGCT TTTAGCGTCTGCGCTAATAAAAAAACAGGGCATAAGCCCTGTTTTTTT 48 TTerm_0134 NC_003197.2 1240503 1240514 12 1240520 1240531 12 5 100 0 24 58 41 58 41 0 1240516 AAAAATACCGGC GCCGGTATTTTT True GTGAGGTGA ATAGTGAAA True True + AAAAATACCGGC GTGAT GCCGGTATTTTT ATAGTGAAA 88 STM1151 intergenic 1240478 1240542 + down GGTCTTCAGGTCTGGAGTGAGGTGAAAAATACCGGCGTGATGCCGGTATTTTTATAGTGAAATG GGGACGAACATCGTCAGCGAGATAAGGTCTTCAGGTCTGGAGTGAGGTGAAAAATACCGGCGTGATGCCGGTATTTTTATAGTGAAATGAGGTATCAGGTGCGTATATTCGCGG GGTCTTCAGGTCTGGAGTGAGGTGAAAAATACCGGCGTGATGCCGGTATTTTT 53 TTerm_0135 NC_003197.2 1268100 1268108 9 1268118 1268126 9 9 100 0 18 77 22 77 22 0 1268112 AAACATATC GATATGTTT True TCTTTTTGA TGTCTGCCC False True + AAACATATC ACGAAACTG GATATGTTT TGTCTGCCC 52 STM1184 intergenic 1268087 1268344 + down CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACAT GTCGCTTTTCCAGTTGAACCGGTAACACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACATCATTCTACCGGCTGTGGGCGTGTCG CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTT 39 TTerm_0136 NC_003197.2 1268100 1268108 9 1268118 1268126 9 9 100 0 18 77 22 77 22 0 1268112 AAACATATC GATATGTTT True TCTTTTTGA TGTCTGCCC False True + AAACATATC ACGAAACTG GATATGTTT TGTCTGCCC 52 STM1185 intergenic 1268087 1268344 - down ATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTG CGACACGCCCACAGCCGGTAGAATGATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTGTTACCGGTTCAACTGGAAAAGCGAC CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTT 39 TTerm_0137 NC_003197.2 1268131 1268140 10 1268150 1268159 10 9 100 0 20 10 90 10 90 0 1268144 TGCCCGCGCC GGCGCGGGCA True GTTTTGTCT TTTTTTTAG False True + TGCCCGCGCC ATCCACCCC GGCGCGGGCA TTTTTTTAG 88 STM1184 intergenic 1268087 1268344 + down CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACAT GTCGCTTTTCCAGTTGAACCGGTAACACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACATCATTCTACCGGCTGTGGGCGTGTCG CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCA 72 TTerm_0138 NC_003197.2 1268131 1268140 10 1268150 1268159 10 9 100 0 20 10 90 10 90 0 1268144 TGCCCGCGCC GGCGCGGGCA True GTTTTGTCT TTTTTTTAG False True + TGCCCGCGCC ATCCACCCC GGCGCGGGCA TTTTTTTAG 88 STM1185 intergenic 1268087 1268344 - down ATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTG CGACACGCCCACAGCCGGTAGAATGATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTGTTACCGGTTCAACTGGAAAAGCGAC CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCA 72 TTerm_0139 NC_003197.2 1281691 1281701 11 1281707 1281717 11 5 90 0 17 50 50 50 50 0 1281703 AAAAAGGTCCG CGGGCCTTTTT True ACATTAATA TATCAGGCA True True + AAAAAGGTCCG CTTGT CGGGCCTTTTT TATCAGGCA 82 STM1197 intergenic 1281666 1281779 + down GTTAAGCCAGAGACAGACATTAATAAAAAGGTCCGCTTGTCGGGCCTTTTTTATCAGGCATATCACCTCTTGTTCTGCGTTATTCATCCTGCCACACTAACAGGCGACGGATA TTCCTTGATCTTTAAAAAGATCTAAGTTAAGCCAGAGACAGACATTAATAAAAAGGTCCGCTTGTCGGGCCTTTTTTATCAGGCATATCACCTCTTGTTCTGCGTTATTCATCCTGCCACACTAACAGGCGACGGATAAGGAGCCACTATGTTTTTAATTAAT GTTAAGCCAGAGACAGACATTAATAAAAAGGTCCGCTTGTCGGGCCTTTTT 51 TTerm_0140 NC_003197.2 1287817 1287825 9 1287830 1287838 9 4 100 0 18 33 66 33 66 0 1287827 AAGGCAGCC GGCTGCCTT True GGAGAATTA TTTTAATGG False True + AAGGCAGCC ATTC GGCTGCCTT TTTTAATGG 76 STM1203 intergenic 1287792 1287877 + down GCAGTAATGATGTTGGGGAGAATTAAGGCAGCCATTCGGCTGCCTTTTTTAATGGCGCTTTACATGCCGCTCTCCGACAGTCTGT GGATGAGTACATCCGTAACAGCTAAGCAGTAATGATGTTGGGGAGAATTAAGGCAGCCATTCGGCTGCCTTTTTTAATGGCGCTTTACATGCCGCTCTCCGACAGTCTGTCAGAACTGATAATTGGCGGTGAGGC GCAGTAATGATGTTGGGGAGAATTAAGGCAGCCATTCGGCTGCCTT 46 TTerm_0141 NC_003197.2 1287817 1287825 9 1287830 1287838 9 4 100 0 18 33 66 33 66 0 1287827 AAGGCAGCC GGCTGCCTT True GGAGAATTA TTTTAATGG False True + AAGGCAGCC ATTC GGCTGCCTT TTTTAATGG 76 STM1204 intergenic 1287792 1287877 - down ACAGACTGTCGGAGAGCGGCATGTAAAGCGCCATTAAAAAAGGCAGCCGAATGGCTGCCTTAATTCTCCCCAACATCATTACTGC GCCTCACCGCCAATTATCAGTTCTGACAGACTGTCGGAGAGCGGCATGTAAAGCGCCATTAAAAAAGGCAGCCGAATGGCTGCCTTAATTCTCCCCAACATCATTACTGCTTAGCTGTTACGGATGTACTCATCC GCAGTAATGATGTTGGGGAGAATTAAGGCAGCCATTCGGCTGCCTT 46 TTerm_0142 NC_003197.2 1294226 1294233 8 1294238 1294245 8 4 100 0 16 37 62 37 62 0 1294235 AACCAGCC GGCTGGTT True GACCGGATA TTTTTATGC False True + AACCAGCC TTGC GGCTGGTT TTTTTATGC 72 STM1210 intergenic 1294189 1294327 + down CGCCATCCGGCAATATGGCGTTATCAGTGACCGGATAACCAGCCTTGCGGCTGGTTTTTTTATGCTCAATTCTCGCAAACTGTCTATCTTTTCAGCATGAAAACTTGATGCACATCAATTTTGGTATGACCAATGCAC CAAAGCGTTTAAAACGCTGGGATAACGCCATCCGGCAATATGGCGTTATCAGTGACCGGATAACCAGCCTTGCGGCTGGTTTTTTTATGCTCAATTCTCGCAAACTGTCTATCTTTTCAGCATGAAAACTTGATGCACATCAATTTTGGTATGACCAATGCACCGTTCATGCTATTCTCATATCAGAA CGCCATCCGGCAATATGGCGTTATCAGTGACCGGATAACCAGCCTTGCGGCTGGTT 56 TTerm_0143 NC_003197.2 1325639 1325657 19 1325663 1325681 19 5 89 0 28 65 34 64 35 0 1325659 TAAAAACAAAAACGGGGAC GTCCCCGTTTTTATTATTA True ATAATTGTT GTATTCGAA True True + TAAAAACAAAAACGGGGAC TTAAC GTCCCCGTTTTTATTATTA GTATTCGAA 96 STM1238 intergenic 1325625 1326065 + down TAACGATAATTGTTAAAAACAAAAACGGGGACTTAACGTCCCCGTTTTTATTATTAGTATTCGAACGGTTATCAAAACTTTATCAAAACTCCCTCAATTCAGACCGCAATAGTAGTTCATCCTTTACCCCGATCGTCATGATAACCTGAGACCCCCCTGAAAGCTGATAGTTACCGATTTTGATTGTAGTGGTTTTCTTAATAATGTGTGATTTGGCTATTTTTTGAAAGTGCCTTACCAGATTTATTGTTATTATCAGGAGAATTTTTTAATAAAAAGTGATGGTTTATTGACTACAATAGTGGGTAGGTTAAGTATTTTATAAAATTATTAGCATGCTTTATTTGCTCTTCTACAAGGCTGCTAAGAAGTGTTGAAATATCAGCCTGATAAAGAATACGTCAGCGAAAGTGAATGCTATATTAGTCATAAAAATTCAG TGACGCGATTATCGCGAATATGTAATAACGATAATTGTTAAAAACAAAAACGGGGACTTAACGTCCCCGTTTTTATTATTAGTATTCGAACGGTTATCAAAACTTTATCAAAACTCCCTCAATTCAGACCGCAATAGTAGTTCATCCTTTACCCCGATCGTCATGATAACCTGAGACCCCCCTGAAAGCTGATAGTTACCGATTTTGATTGTAGTGGTTTTCTTAATAATGTGTGATTTGGCTATTTTTTGAAAGTGCCTTACCAGATTTATTGTTATTATCAGGAGAATTTTTTAATAAAAAGTGATGGTTTATTGACTACAATAGTGGGTAGGTTAAGTATTTTATAAAATTATTAGCATGCTTTATTTGCTCTTCTACAAGGCTGCTAAGAAGTGTTGAAATATCAGCCTGATAAAGAATACGTCAGCGAAAGTGAATGCTATATTAGTCATAAAAATTCAGGAGACATATGCTCAAACCTATCTGC TAACGATAATTGTTAAAAACAAAAACGGGGACTTAACGTCCCCGTTTTTATTATTA 56 TTerm_0144 NC_003197.2 1329400 1329407 8 1329412 1329419 8 4 100 0 16 25 75 25 75 0 1329409 ACAGCGCC GGCGCTGT True CGTCACAGA TTTCGATCG False True + ACAGCGCC TCAG GGCGCTGT TTTCGATCG 72 STM1241 intergenic 1328972 1329456 - down ACGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCTACCACTCAGAACATGTTGTTGTTGATACCTCAGACCGGTATGTGGAACCGACATTCATCGCTTCACTGGCCTGTCGGTATGAGTAGCCCTTATCAACAATCAGCTGTGCGCATTCCAGCCTGAAATCTGAAAGTACGTTTGGTTTTGTTGTTTATTAAGAGCCTATCCCATTAGACTCTTTTATTCGCCAAACTGGCTTTAACGATTACGCCTACTGGGATAGGTTCTAAACTTATCATCAATACGTAAAATACCTATTTACGAACAAAAAGTAACAGGTAAAAATCCGAAATAAAACCAGCATAACTAAAACTTACTGCAGATATGCACACGCATTATTACTATGTTTCCAGGATAGTCTCGACCAGTCAAGACTATCTATTTTATATAAAAAGGGAAATAC CTGATATGTGGCTGGTCGCCGAATAACGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCTACCACTCAGAACATGTTGTTGTTGATACCTCAGACCGGTATGTGGAACCGACATTCATCGCTTCACTGGCCTGTCGGTATGAGTAGCCCTTATCAACAATCAGCTGTGCGCATTCCAGCCTGAAATCTGAAAGTACGTTTGGTTTTGTTGTTTATTAAGAGCCTATCCCATTAGACTCTTTTATTCGCCAAACTGGCTTTAACGATTACGCCTACTGGGATAGGTTCTAAACTTATCATCAATACGTAAAATACCTATTTACGAACAAAAAGTAACAGGTAAAAATCCGAAATAAAACCAGCATAACTAAAACTTACTGCAGATATGCACACGCATTATTACTATGTTTCCAGGATAGTCTCGACCAGTCAAGACTATCTATTTTATATAAAAAGGGAAATACTTCACATGAATAAAATACATGTTAC GTATTTCCCTTTTTATATAAAATAGATAGTCTTGACTGGTCGAGACTATCCTGGAAACATAGTAATAATGCGTGTGCATATCTGCAGTAAGTTTTAGTTATGCTGGTTTTATTTCGGATTTTTACCTGTTACTTTTTGTTCGTAAATAGGTATTTTACGTATTGATGATAAGTTTAGAACCTATCCCAGTAGGCGTAATCGTTAAAGCCAGTTTGGCGAATAAAAGAGTCTAATGGGATAGGCTCTTAATAAACAACAAAACCAAACGTACTTTCAGATTTCAGGCTGGAATGCGCACAGCTGATTGTTGATAAGGGCTACTCATACCGACAGGCCAGTGAAGCGATGAATGTCGGTTCCACATACCGGTCTGAGGTATCAACAACAACATGTTCTGAGTGGTAGCGTTTGCGTTATATCGTCACAGACAGCGCCTCAGGGCGCTGT 447 TTerm_0145 NC_003197.2 1351986 1352002 17 1352010 1352026 17 7 82 0 19 38 61 35 64 0 1352005 CAGAAGCCGCATCGCGC GCGTGATGCGGTTTTTG True TTTTAAATC CGTATTGAA False True + CAGAAGCCGCATCGCGC GTCGCCA GCGTGATGCGGTTTTTG CGTATTGAA 70 STM1272 intergenic 1351943 1352168 + down GGATCTTGTAGTATCTATTTGATATAAAGTGATTTTTTAAATCAGAAGCCGCATCGCGCGTCGCCAGCGTGATGCGGTTTTTGCGTATTGAAAAGCGCTGTTTATTTACATCAGACATGGGTTGAAAAGAAACATTAAGAAAACATTAAGAATATCGCATTGTTTGCTAATGAGAGCGTATTCATAAAACTTATGATTGGGTATTAAAAACCAGAAGAGTCTTAT CGAACACGACGTTTGCGGTTGGTAAGGATCTTGTAGTATCTATTTGATATAAAGTGATTTTTTAAATCAGAAGCCGCATCGCGCGTCGCCAGCGTGATGCGGTTTTTGCGTATTGAAAAGCGCTGTTTATTTACATCAGACATGGGTTGAAAAGAAACATTAAGAAAACATTAAGAATATCGCATTGTTTGCTAATGAGAGCGTATTCATAAAACTTATGATTGGGTATTAAAAACCAGAAGAGTCTTATAATCATGAAACTCGATACCCGATTA GGATCTTGTAGTATCTATTTGATATAAAGTGATTTTTTAAATCAGAAGCCGCATCGCGCGTCGCCAGCGTGATGCGGTTTTTG 83 TTerm_0146 NC_003197.2 1391526 1391533 8 1391540 1391547 8 6 100 0 16 37 62 37 62 0 1391536 AAACCGGC GCCGGTTT True ATTCAAGGA TTTTGTGCC False True + AAACCGGC CTGCGA GCCGGTTT TTTTGTGCC 72 STM1311 intergenic 1391497 1391785 + down CAACTGTACATTGCCTGAACATTCAAGGAAACCGGCCTGCGAGCCGGTTTTTTTGTGCCTGCCATAACCTTATTTATTATCGCGAATTATTTGCCCGAAATGTGAGGGGGGTCATAACGCCAGGTCAATGAGAGACAATTTAGTGGGTCAAGGAAATACCATCCGGTGGTCCGATCCCGTATACTCATTTCAGCCACCTAAAAAAGTAAATCCGGTTACGCAAGTCGCCCAGAGTATGGATGCAGGTTGAGGCTTGCGGCGTATCTGGTTGACAGATAATCGCACATG TGACCCACAGGCGCCGAAGCAGTAACAACTGTACATTGCCTGAACATTCAAGGAAACCGGCCTGCGAGCCGGTTTTTTTGTGCCTGCCATAACCTTATTTATTATCGCGAATTATTTGCCCGAAATGTGAGGGGGGTCATAACGCCAGGTCAATGAGAGACAATTTAGTGGGTCAAGGAAATACCATCCGGTGGTCCGATCCCGTATACTCATTTCAGCCACCTAAAAAAGTAAATCCGGTTACGCAAGTCGCCCAGAGTATGGATGCAGGTTGAGGCTTGCGGCGTATCTGGTTGACAGATAATCGCACATGAGGAAGGTTTTTATGGAAAAGAAAC CAACTGTACATTGCCTGAACATTCAAGGAAACCGGCCTGCGAGCCGGTTT 50 TTerm_0147 NC_003197.2 1397072 1397080 9 1397085 1397093 9 4 100 0 18 22 77 22 77 0 1397082 TGCGGCGCA TGCGCCGCA True CCTGAGTTT TTTTTTGCT False True + TGCGGCGCA AGAA TGCGCCGCA TTTTTTGCT 76 STM1317 intergenic 1397061 1397105 + down CTCCTGAGTTTGCGGCGCAAGAATGCGCCGCATTTTTTGCTGTT TCCTGGCAGTTTTCTTGATATTTAGCTCCTGAGTTTGCGGCGCAAGAATGCGCCGCATTTTTTGCTGTTTATGCAGGAATCGCGTTAATTTTCC CTCCTGAGTTTGCGGCGCAAGAATGCGCCGCA 32 TTerm_0148 NC_003197.2 1397072 1397080 9 1397085 1397093 9 4 100 0 18 22 77 22 77 0 1397082 TGCGGCGCA TGCGCCGCA True CCTGAGTTT TTTTTTGCT False True + TGCGGCGCA AGAA TGCGCCGCA TTTTTTGCT 76 STM1318 intergenic 1397061 1397105 - down AACAGCAAAAAATGCGGCGCATTCTTGCGCCGCAAACTCAGGAG GGAAAATTAACGCGATTCCTGCATAAACAGCAAAAAATGCGGCGCATTCTTGCGCCGCAAACTCAGGAGCTAAATATCAAGAAAACTGCCAGGA CTCCTGAGTTTGCGGCGCAAGAATGCGCCGCA 32 TTerm_0149 NC_003197.2 1399973 1399983 11 1399991 1400001 11 7 100 0 22 45 54 45 54 0 1399986 AAAACGCCGGT ACCGGCGTTTT True GAAAAAACA TAGTGACAG True True + AAAACGCCGGT ACTGGAG ACCGGCGTTTT TAGTGACAG 84 STM1319 intergenic 1399964 1400066 + down GAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTTTAGTGACAGACATTTTGAGTTGCCGATCGTCATGTCTCAGACGATGTGAACGCCCGATAATGTAT CCAGGAAAACGAAATCGCTGACTAAGAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTTTAGTGACAGACATTTTGAGTTGCCGATCGTCATGTCTCAGACGATGTGAACGCCCGATAATGTATTATCGATGCGCCAGTTCAGCGTCTT GAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTT 37 TTerm_0150 NC_003197.2 1399973 1399983 11 1399991 1400001 11 7 100 0 22 45 54 45 54 0 1399986 AAAACGCCGGT ACCGGCGTTTT True GAAAAAACA TAGTGACAG True True + AAAACGCCGGT ACTGGAG ACCGGCGTTTT TAGTGACAG 84 STM1320 intergenic 1399964 1400066 - down ATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTTTGTTTTTTC AAGACGCTGAACTGGCGCATCGATAATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTTTGTTTTTTCTTAGTCAGCGATTTCGTTTTCCTGG GAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTT 37 TTerm_0151 NC_003197.2 1402194 1402201 8 1402210 1402217 8 8 87 0 11 75 25 71 28 0 1402205 TAAACTGT ACAGTATA True AAACCCATT GGGTTTTTA False True + TAAACTGT CAATTCAT ACAGTATA GGGTTTTTA 38 STM1322 intergenic 1402193 1402331 - down AGATGTTTCCGAAACAAAGTCAACGGGCAATTAGCCGCTGAGCCAGACGGCAAGCGGCTTTGACAGAGACAAAGAGTTACAACGTCACCACTTCCGCCTACTGTATAAAAACCCTATACTGTATGAATTGACAGTTTA TGACGGCGGCGCATCTACTCGGTTAAGATGTTTCCGAAACAAAGTCAACGGGCAATTAGCCGCTGAGCCAGACGGCAAGCGGCTTTGACAGAGACAAAGAGTTACAACGTCACCACTTCCGCCTACTGTATAAAAACCCTATACTGTATGAATTGACAGTTTAATGGGTTTTATCATGACGGCGGAAG TAAACTGTCAATTCATACAGTATA 24 TTerm_0152 NC_003197.2 1415576 1415587 12 1415592 1415603 12 4 100 0 24 58 41 58 41 0 1415589 AAAAAAGCCTCC GGAGGCTTTTTT True AACAGCGCA TGTATCTGA True True + AAAAAAGCCTCC TGAT GGAGGCTTTTTT TGTATCTGA 88 STM1336 intergenic 1415367 1415659 + down GCCAGTGAAAAGAGGGAGCCTGGCTCCCTCTCTTTTATTTACTGTTCAGTGAGTTGACAATTGACCTGTAACCCTTTTCAATAAAGGATATTCGGTTTTACCACATAAGGTAACGCAAGCATGAACGCTGCTATTTTCCGTTTCTTTTTTTACTTTAGCACCTGATCCCAGGAGGCTAGCGCGTGAAAAACGAAACGAAAAACAGCGCAAAAAAGCCTCCTGATGGAGGCTTTTTTTGTATCTGAAATCGAGAGATTACGTCCAATGAACCGGTGTCTTCACCGACACAATG AAAAGCGAAAGCAGCTCTGGCATAAGCCAGTGAAAAGAGGGAGCCTGGCTCCCTCTCTTTTATTTACTGTTCAGTGAGTTGACAATTGACCTGTAACCCTTTTCAATAAAGGATATTCGGTTTTACCACATAAGGTAACGCAAGCATGAACGCTGCTATTTTCCGTTTCTTTTTTTACTTTAGCACCTGATCCCAGGAGGCTAGCGCGTGAAAAACGAAACGAAAAACAGCGCAAAAAAGCCTCCTGATGGAGGCTTTTTTTGTATCTGAAATCGAGAGATTACGTCCAATGAACCGGTGTCTTCACCGACACAATGAGGAAAACCATGTCACATCTCGCAG GCCAGTGAAAAGAGGGAGCCTGGCTCCCTCTCTTTTATTTACTGTTCAGTGAGTTGACAATTGACCTGTAACCCTTTTCAATAAAGGATATTCGGTTTTACCACATAAGGTAACGCAAGCATGAACGCTGCTATTTTCCGTTTCTTTTTTTACTTTAGCACCTGATCCCAGGAGGCTAGCGCGTGAAAAACGAAACGAAAAACAGCGCAAAAAAGCCTCCTGATGGAGGCTTTTTT 236 TTerm_0153 NC_003197.2 1444930 1444937 8 1444945 1444952 8 7 87 0 11 56 43 57 42 0 1444940 GTGCTAAT ATGAGCAC True ATAACCGTG TTTTTGCGT False True + GTGCTAAT AGTAGGC ATGAGCAC TTTTTGCGT 46 STM1364 intergenic 1444928 1445112 - down ATCCCGTCGGGCGGCATTGCCGCCCGATGCTTTAGCGACGTTTATCAATTCAACGCACACTCCATTTTGATTCGCCCGTCTGTTCCCCGCCGCATCTCATTTCTGTCGCAAATCCGTTACAGTTTTTAAACTATTGAGACGAATCTGATCGACGCAAAAAGTGCTCATGCCTACTATTAGCACA TCGAGGAAGCCAACAAGCAGTCATAATCCCGTCGGGCGGCATTGCCGCCCGATGCTTTAGCGACGTTTATCAATTCAACGCACACTCCATTTTGATTCGCCCGTCTGTTCCCCGCCGCATCTCATTTCTGTCGCAAATCCGTTACAGTTTTTAAACTATTGAGACGAATCTGATCGACGCAAAAAGTGCTCATGCCTACTATTAGCACACGGTTATAAATCAACACATTGATTT TGTGCTAATAGTAGGCATGAGCAC 24 TTerm_0154 NC_003197.2 1450474 1450488 15 1450494 1450508 15 5 93 0 25 56 43 57 42 0 1450490 AACCCTTAAGCCTGT ACAGACTTAAGGGTT True GGGGCCGGA TTTCTTTTC False True + AACCCTTAAGCCTGT ATTGA ACAGACTTAAGGGTT TTTCTTTTC 74 STM1367 intergenic 1450245 1450533 + down TAAAGTCTGTGTAGGCCGGATAAGGCGTTAGCCGCCATCCGGCTATGTTACCAGGCAATCTCACCAGACCTTGTCCCCAGGTAATAGATAACCCCCTTGATTTTGTTTAAAAAAAATACAGATCGCCATTTGTGCTAAAAAGGCGCGCTCTCTTTATGAGATTATTCTTATGCCCCTTCAAGAGCTAAGCCATTAAGAGTGCCGGAGATAAGCGCCGGATGGGGCCGGAACCCTTAAGCCTGTATTGAACAGACTTAAGGGTTTTTCTTTTCCGGGCGCGTAAAAAAC CGCCTGGCGGTTGGGCGTGCATTAATAAAGTCTGTGTAGGCCGGATAAGGCGTTAGCCGCCATCCGGCTATGTTACCAGGCAATCTCACCAGACCTTGTCCCCAGGTAATAGATAACCCCCTTGATTTTGTTTAAAAAAAATACAGATCGCCATTTGTGCTAAAAAGGCGCGCTCTCTTTATGAGATTATTCTTATGCCCCTTCAAGAGCTAAGCCATTAAGAGTGCCGGAGATAAGCGCCGGATGGGGCCGGAACCCTTAAGCCTGTATTGAACAGACTTAAGGGTTTTTCTTTTCCGGGCGCGTAAAAAACTAAGGTCTGTCAATAACCGCCGGCA TAAAGTCTGTGTAGGCCGGATAAGGCGTTAGCCGCCATCCGGCTATGTTACCAGGCAATCTCACCAGACCTTGTCCCCAGGTAATAGATAACCCCCTTGATTTTGTTTAAAAAAAATACAGATCGCCATTTGTGCTAAAAAGGCGCGCTCTCTTTATGAGATTATTCTTATGCCCCTTCAAGAGCTAAGCCATTAAGAGTGCCGGAGATAAGCGCCGGATGGGGCCGGAACCCTTAAGCCTGTATTGAACAGACTTAAGGGTT 263 TTerm_0155 NC_003197.2 1450474 1450488 15 1450494 1450508 15 5 93 0 25 56 43 57 42 0 1450490 AACCCTTAAGCCTGT ACAGACTTAAGGGTT True GGGGCCGGA TTTCTTTTC False True + AACCCTTAAGCCTGT ATTGA ACAGACTTAAGGGTT TTTCTTTTC 74 STM1368 intergenic 1450245 1450533 - down GTTTTTTACGCGCCCGGAAAAGAAAAACCCTTAAGTCTGTTCAATACAGGCTTAAGGGTTCCGGCCCCATCCGGCGCTTATCTCCGGCACTCTTAATGGCTTAGCTCTTGAAGGGGCATAAGAATAATCTCATAAAGAGAGCGCGCCTTTTTAGCACAAATGGCGATCTGTATTTTTTTTAAACAAAATCAAGGGGGTTATCTATTACCTGGGGACAAGGTCTGGTGAGATTGCCTGGTAACATAGCCGGATGGCGGCTAACGCCTTATCCGGCCTACACAGACTTTA TGCCGGCGGTTATTGACAGACCTTAGTTTTTTACGCGCCCGGAAAAGAAAAACCCTTAAGTCTGTTCAATACAGGCTTAAGGGTTCCGGCCCCATCCGGCGCTTATCTCCGGCACTCTTAATGGCTTAGCTCTTGAAGGGGCATAAGAATAATCTCATAAAGAGAGCGCGCCTTTTTAGCACAAATGGCGATCTGTATTTTTTTTAAACAAAATCAAGGGGGTTATCTATTACCTGGGGACAAGGTCTGGTGAGATTGCCTGGTAACATAGCCGGATGGCGGCTAACGCCTTATCCGGCCTACACAGACTTTATTAATGCACGCCCAACCGCCAGGCG TAAAGTCTGTGTAGGCCGGATAAGGCGTTAGCCGCCATCCGGCTATGTTACCAGGCAATCTCACCAGACCTTGTCCCCAGGTAATAGATAACCCCCTTGATTTTGTTTAAAAAAAATACAGATCGCCATTTGTGCTAAAAAGGCGCGCTCTCTTTATGAGATTATTCTTATGCCCCTTCAAGAGCTAAGCCATTAAGAGTGCCGGAGATAAGCGCCGGATGGGGCCGGAACCCTTAAGCCTGTATTGAACAGACTTAAGGGTT 263 TTerm_0156 NC_003197.2 1459864 1459874 11 1459880 1459890 11 5 100 0 22 54 45 54 45 0 1459876 AAAAAAGCGCC GGCGCTTTTTT True ATTAAATAA AAACAAATT True True + AAAAAAGCGCC GGAAG GGCGCTTTTTT AAACAAATT 84 STM1378 intergenic 1459619 1459917 - down ATAATTGTTGTGTGAATTAATTTGTTTAAAAAAGCGCCCTTCCGGCGCTTTTTTTATTTAATCGATAGCCACTATTAATAAAAAAATCAAATCGGATTTTACTATCTAATTGCGGATTATCTAAGAAGAATCCGATGGAAGCCCCCTGTTTTCTTTCGGTTTTTTAGGGACTTTCATGCATTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCATTCCCATCAAAAAAATATTCTCAACATAAAAAAGTTTGTGTAATACTTGTAACGCTACATGGAGATTAACTCAATCTA ACACCGCCTCTGTTCACGTACTGTAATAATTGTTGTGTGAATTAATTTGTTTAAAAAAGCGCCCTTCCGGCGCTTTTTTTATTTAATCGATAGCCACTATTAATAAAAAAATCAAATCGGATTTTACTATCTAATTGCGGATTATCTAAGAAGAATCCGATGGAAGCCCCCTGTTTTCTTTCGGTTTTTTAGGGACTTTCATGCATTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCATTCCCATCAAAAAAATATTCTCAACATAAAAAAGTTTGTGTAATACTTGTAACGCTACATGGAGATTAACTCAATCTAGAGGGTATTAATAATGAATCGTACT TAGATTGAGTTAATCTCCATGTAGCGTTACAAGTATTACACAAACTTTTTTATGTTGAGAATATTTTTTTGATGGGAATGCACTTATTTTTGATCGTTCGCTCAAAGAAGCATCGAAATGCATGAAAGTCCCTAAAAAACCGAAAGAAAACAGGGGGCTTCCATCGGATTCTTCTTAGATAATCCGCAATTAGATAGTAAAATCCGATTTGATTTTTTTATTAATAGTGGCTATCGATTAAATAAAAAAAGCGCCGGAAGGGCGCTTTTTT 271 TTerm_0157 NC_003197.2 1464024 1464034 11 1464044 1464054 11 9 81 0 12 100 0 100 0 0 1464038 AAATTTATATT AATATTATTTT True GGCAGGCGA TTTATTGTG False True + AAATTTATATT CGCCTGGAT AATATTATTTT TTTATTGTG 24 STM1381 intergenic 1463992 1464048 - down ATATTATCCAGGCGAATATAAATTTCGCCTGCCCTGCCACACACTGAGTCATTAAG ATGTTTTACACACAATAAAAAAATAATATTATCCAGGCGAATATAAATTTCGCCTGCCCTGCCACACACTGAGTCATTAAGAATATGAATGATACTTATCTCTATG CTTAATGACTCAGTGTGTGGCAGGGCAGGCGAAATTTATATTCGCCTGGATAATATTATTTT 62 TTerm_0158 NC_003197.2 1473734 1473739 6 1473744 1473749 6 4 100 0 12 83 16 83 16 0 1473741 TTTGAT ATCAAA True GTTATTTCT TTTTGTTTA False True + TTTGAT TTGC ATCAAA TTTTGTTTA 32 STM1387 intergenic 1473713 1473792 + down ATAATAAACCGCGTTATTTCTTTGATTTGCATCAAATTTTGTTTAATAGAGAAGACTGTTATATTCTGTTGGTTTGATC AATACGAACAACGTATGAGCCATGAATAATAAACCGCGTTATTTCTTTGATTTGCATCAAATTTTGTTTAATAGAGAAGACTGTTATATTCTGTTGGTTTGATCTGGCGACGAGTAAAACGTATGACAA ATAATAAACCGCGTTATTTCTTTGATTTGCATCAAA 36 TTerm_0159 NC_003197.2 1511629 1511638 10 1511643 1511652 10 4 100 0 20 50 50 50 50 0 1511640 AAAGCGACCT AGGTCGCTTT True GCAAGGAGA TTTACCGCC False True + AAAGCGACCT GTAA AGGTCGCTTT TTTACCGCC 72 STM1433 intergenic 1511615 1511693 + down TCTGTGCAAGGAGAAAGCGACCTGTAAAGGTCGCTTTTTTACCGCCATCGTGAGCAAGAGCGGCGTTGTTAGCCTCGT AACTCAGGAGCCGGACGCAGAGTAATCTGTGCAAGGAGAAAGCGACCTGTAAAGGTCGCTTTTTTACCGCCATCGTGAGCAAGAGCGGCGTTGTTAGCCTCGTTATTTGTCCGTCGGCAAAGGTAACG TCTGTGCAAGGAGAAAGCGACCTGTAAAGGTCGCTTT 37 TTerm_0160 NC_003197.2 1511629 1511638 10 1511643 1511652 10 4 100 0 20 50 50 50 50 0 1511640 AAAGCGACCT AGGTCGCTTT True GCAAGGAGA TTTACCGCC False True + AAAGCGACCT GTAA AGGTCGCTTT TTTACCGCC 72 STM1434 intergenic 1511615 1511693 - down ACGAGGCTAACAACGCCGCTCTTGCTCACGATGGCGGTAAAAAAGCGACCTTTACAGGTCGCTTTCTCCTTGCACAGA CGTTACCTTTGCCGACGGACAAATAACGAGGCTAACAACGCCGCTCTTGCTCACGATGGCGGTAAAAAAGCGACCTTTACAGGTCGCTTTCTCCTTGCACAGATTACTCTGCGTCCGGCTCCTGAGTT TCTGTGCAAGGAGAAAGCGACCTGTAAAGGTCGCTTT 37 TTerm_0161 NC_003197.2 1524766 1524774 9 1524779 1524787 9 4 100 0 18 44 55 44 55 0 1524776 AGGGAGTGA TCACTCCCT True TAAGTAACA TATTTTTGA False True + AGGGAGTGA GAAA TCACTCCCT TATTTTTGA 60 STM1449 intergenic 1524752 1524801 + down GGCATTAAGTAACAGGGAGTGAGAAATCACTCCCTTATTTTTGATGTTC CTATTGTCTGATTTGCTGGAAATAAGGCATTAAGTAACAGGGAGTGAGAAATCACTCCCTTATTTTTGATGTTCAGGTAAAAAAATGAAGAATATCCTC GGCATTAAGTAACAGGGAGTGAGAAATCACTCCCT 35 TTerm_0162 NC_003197.2 1558633 1558639 7 1558644 1558650 7 4 100 0 14 14 85 14 85 0 1558641 CGGCCTC GAGGCCG True ACGTGCGGC TTTTTATAC False True + CGGCCTC TTCG GAGGCCG TTTTTATAC 68 STM1480 intergenic 1558616 1558791 + down TCTTTTAAACGTGCGGCGGCCTCTTCGGAGGCCGTTTTTATACACTTCATCCTTTACGCTGCCTCTTTGTTGGCTGCACTCAGAAACCCCGGTCACATCGTTATCTATGCTCCCGGGGATTTCTTCCCTTGCCGCCGCGATGCATCTTGAATGATTTTGTGTATGTATTGCATTT GGATGCGATTCTGAAAGCGCTTTAATCTTTTAAACGTGCGGCGGCCTCTTCGGAGGCCGTTTTTATACACTTCATCCTTTACGCTGCCTCTTTGTTGGCTGCACTCAGAAACCCCGGTCACATCGTTATCTATGCTCCCGGGGATTTCTTCCCTTGCCGCCGCGATGCATCTTGAATGATTTTGTGTATGTATTGCATTTTATCTTTTGTTTAAATCGCTAAGCA TCTTTTAAACGTGCGGCGGCCTCTTCGGAGGCCG 34 TTerm_0163 NC_003197.2 1558633 1558639 7 1558644 1558650 7 4 100 0 14 14 85 14 85 0 1558641 CGGCCTC GAGGCCG True ACGTGCGGC TTTTTATAC False True + CGGCCTC TTCG GAGGCCG TTTTTATAC 68 STM1481 intergenic 1558616 1558791 - down AAATGCAATACATACACAAAATCATTCAAGATGCATCGCGGCGGCAAGGGAAGAAATCCCCGGGAGCATAGATAACGATGTGACCGGGGTTTCTGAGTGCAGCCAACAAAGAGGCAGCGTAAAGGATGAAGTGTATAAAAACGGCCTCCGAAGAGGCCGCCGCACGTTTAAAAGA TGCTTAGCGATTTAAACAAAAGATAAAATGCAATACATACACAAAATCATTCAAGATGCATCGCGGCGGCAAGGGAAGAAATCCCCGGGAGCATAGATAACGATGTGACCGGGGTTTCTGAGTGCAGCCAACAAAGAGGCAGCGTAAAGGATGAAGTGTATAAAAACGGCCTCCGAAGAGGCCGCCGCACGTTTAAAAGATTAAAGCGCTTTCAGAATCGCATCC TCTTTTAAACGTGCGGCGGCCTCTTCGGAGGCCG 34 TTerm_0164 NC_003197.2 1572234 1572243 10 1572250 1572259 10 6 100 0 20 50 50 50 50 0 1572246 AAAAGGCAGG CCTGCCTTTT True AATGAGAGA GTGGGGATT True True + AAAAGGCAGG TAAAAT CCTGCCTTTT GTGGGGATT 80 STM1495 intergenic 1571968 1572267 - down ATCCCCACAAAAGGCAGGATTTTACCTGCCTTTTCTCTCATTACGGCCTATTTTTATCTACAAAAAGTGACAACGTCACACCGCGCTTCTATTTTTAAGATAATTCTTTATCGTGAATGTTCACCCTAAGCCGCATAAGGGCAAAGCATAATTGTTAATAGATGTTTAATAGTGTTAAACATCACGCTTCGCTGGAATCCTTCCCAACCTGTTGCTATAGCTCAAAGCACCCTGCCGGAACATGGCATAACAACACGCGACTCTTAACGTCGCCATAACACATGCAAACAGGGAGACAC TCGCTGTAAAACCGTTATTCCGTTAATCCCCACAAAAGGCAGGATTTTACCTGCCTTTTCTCTCATTACGGCCTATTTTTATCTACAAAAAGTGACAACGTCACACCGCGCTTCTATTTTTAAGATAATTCTTTATCGTGAATGTTCACCCTAAGCCGCATAAGGGCAAAGCATAATTGTTAATAGATGTTTAATAGTGTTAAACATCACGCTTCGCTGGAATCCTTCCCAACCTGTTGCTATAGCTCAAAGCACCCTGCCGGAACATGGCATAACAACACGCGACTCTTAACGTCGCCATAACACATGCAAACAGGGAGACACACCGCAATGCACACCCTCACCCTAA GTGTCTCCCTGTTTGCATGTGTTATGGCGACGTTAAGAGTCGCGTGTTGTTATGCCATGTTCCGGCAGGGTGCTTTGAGCTATAGCAACAGGTTGGGAAGGATTCCAGCGAAGCGTGATGTTTAACACTATTAAACATCTATTAACAATTATGCTTTGCCCTTATGCGGCTTAGGGTGAACATTCACGATAAAGAATTATCTTAAAAATAGAAGCGCGGTGTGACGTTGTCACTTTTTGTAGATAAAAATAGGCCGTAATGAGAGAAAAGGCAGGTAAAATCCTGCCTTTT 291 TTerm_0165 NC_003197.2 1582127 1582140 14 1582146 1582159 14 5 78 0 13 35 64 27 72 0 1582142 GCGCGACCAGAACA TGATCTGGCAGCGC True ACATTGCCG TTTTTACAT False True + GCGCGACCAGAACA TTTTG TGATCTGGCAGCGC TTTTTACAT 42 STM1504 intergenic 1582119 1582230 + down CATTGCCGCGCGACCAGAACATTTTGTGATCTGGCAGCGCTTTTTACATCAATATACTTGTATGGTAGTAGCTCAGTTGGGTAAATTTCCTGCATCCCATAATGCGATGTA CGTCGTCGGATGGGGACGTACGTAACATTGCCGCGCGACCAGAACATTTTGTGATCTGGCAGCGCTTTTTACATCAATATACTTGTATGGTAGTAGCTCAGTTGGGTAAATTTCCTGCATCCCATAATGCGATGTAAGGAATAAAAATGAAGATTGTAGGG CATTGCCGCGCGACCAGAACATTTTGTGATCTGGCAGCGC 40 TTerm_0166 NC_003197.2 1607627 1607633 7 1607639 1607645 7 5 100 0 14 28 71 28 71 0 1607635 AGGACGC GCGTCCT True ATTATTTCA TTTTTATTG False True + AGGACGC TTCTG GCGTCCT TTTTTATTG 68 STM1530 intergenic 1607526 1607667 + down TAAAACTTGCTGATTAAGACAGTTTAGGGATACCCTCCTTTTCCCAAAACTGTGTCACTGCTTAACCTTTATTATTGTTAATTTATTCTTTTATTATTTCAGGACGCTTCTGGCGTCCTTTTTTATTGACTATTCGTTGAC GCTCGGCTTAGTCTACGAGTTTTGATAAAACTTGCTGATTAAGACAGTTTAGGGATACCCTCCTTTTCCCAAAACTGTGTCACTGCTTAACCTTTATTATTGTTAATTTATTCTTTTATTATTTCAGGACGCTTCTGGCGTCCTTTTTTATTGACTATTCGTTGACTATTCGACTTCGATCTCGCGAATGC TAAAACTTGCTGATTAAGACAGTTTAGGGATACCCTCCTTTTCCCAAAACTGTGTCACTGCTTAACCTTTATTATTGTTAATTTATTCTTTTATTATTTCAGGACGCTTCTGGCGTCCT 119 TTerm_0167 NC_003197.2 1607627 1607633 7 1607639 1607645 7 5 100 0 14 28 71 28 71 0 1607635 AGGACGC GCGTCCT True ATTATTTCA TTTTTATTG False True + AGGACGC TTCTG GCGTCCT TTTTTATTG 68 STM1531 intergenic 1607526 1607667 - down GTCAACGAATAGTCAATAAAAAAGGACGCCAGAAGCGTCCTGAAATAATAAAAGAATAAATTAACAATAATAAAGGTTAAGCAGTGACACAGTTTTGGGAAAAGGAGGGTATCCCTAAACTGTCTTAATCAGCAAGTTTTA GCATTCGCGAGATCGAAGTCGAATAGTCAACGAATAGTCAATAAAAAAGGACGCCAGAAGCGTCCTGAAATAATAAAAGAATAAATTAACAATAATAAAGGTTAAGCAGTGACACAGTTTTGGGAAAAGGAGGGTATCCCTAAACTGTCTTAATCAGCAAGTTTTATCAAAACTCGTAGACTAAGCCGAGC TAAAACTTGCTGATTAAGACAGTTTAGGGATACCCTCCTTTTCCCAAAACTGTGTCACTGCTTAACCTTTATTATTGTTAATTTATTCTTTTATTATTTCAGGACGCTTCTGGCGTCCT 119 TTerm_0168 NC_003197.2 1619612 1619621 10 1619631 1619640 10 9 100 0 20 60 40 60 40 0 1619625 TATTGTGGTC GACCACAATA True AATCCTCTT TTTTAAGGT False True + TATTGTGGTC TAGCGGCCT GACCACAATA TTTTAAGGT 72 STM1544 intergenic 1619606 1619776 - down AATTTTCAATTAATCAACTGATTTTAAAGAATTTAATCCATCACACTTGCGATGGATAAAAATCCCCTGTGATAAATTTTTGTTATATTGATCACGTTCTAACCACAAGAGAGGTGATTTGAAAATAACCTTAAAATATTGTGGTCAGGCCGCTAGACCACAATAAGAGG TAGGGGAAAACGATAGCTCCGATTGAATTTTCAATTAATCAACTGATTTTAAAGAATTTAATCCATCACACTTGCGATGGATAAAAATCCCCTGTGATAAATTTTTGTTATATTGATCACGTTCTAACCACAAGAGAGGTGATTTGAAAATAACCTTAAAATATTGTGGTCAGGCCGCTAGACCACAATAAGAGGATTAATCATGAAAAGAAAAACAATG CCTCTTATTGTGGTCTAGCGGCCTGACCACAATA 34 TTerm_0169 NC_003197.2 1659134 1659139 6 1659145 1659150 6 5 100 0 12 33 66 33 66 0 1659141 AGAGCG CGCTCT True TTCTCAAAA GTCTCTTTT True True + AGAGCG CGTGA CGCTCT GTCTCTTTT 56 STM1575 intergenic 1658986 1659191 + down AGTTACAAATAATTTAATAAAAATCGCTTTTAATTTACAAATAGTAACAATTAAGAAACATCATATCTCCTCATCGCGCCGCGCTGGCCTGGTTTTTTATCTATTCTTTCACTCAATATTCTAAAAAAACTTCAATAAGTTCTCAAAAGAGCGCGTGACGCTCTGTCTCTTTTTTGTGTTTTTCTTCAAATGATATGCGCATGTG GATTACGCTTGAACTCTTTGCGTAAAGTTACAAATAATTTAATAAAAATCGCTTTTAATTTACAAATAGTAACAATTAAGAAACATCATATCTCCTCATCGCGCCGCGCTGGCCTGGTTTTTTATCTATTCTTTCACTCAATATTCTAAAAAAACTTCAATAAGTTCTCAAAAGAGCGCGTGACGCTCTGTCTCTTTTTTGTGTTTTTCTTCAAATGATATGCGCATGTGAGGGGTAAAATGACACGACAAAACG AGTTACAAATAATTTAATAAAAATCGCTTTTAATTTACAAATAGTAACAATTAAGAAACATCATATCTCCTCATCGCGCCGCGCTGGCCTGGTTTTTTATCTATTCTTTCACTCAATATTCTAAAAAAACTTCAATAAGTTCTCAAAAGAGCGCGTGACGCTCT 164 TTerm_0170 NC_003197.2 1669408 1669416 9 1669424 1669432 9 7 100 0 18 22 77 22 77 0 1669419 ACACGCCGC GCGGCGTGT True TCTTTGCGA TAAAATTTT False True + ACACGCCGC CAAAATA GCGGCGTGT TAAAATTTT 84 STM1583 intergenic 1669227 1669498 - down AAAAGCGTTTATGTTTAGCCAGTTTTGTTAGAAATCAGACTCGCTGAGCCGGCGTTAAAAATTTTAACACGCCGCTATTTTGGCGGCGTGTCGCAAAGAGATTCTCAGAACCCGATTTCCGTTTGTACGCCAAAATTCCACGTACCTCCGGCGCGACAGCCGGCCTGTCTTATTTTTTTCAAAAGTATCCAACGCTATTCCACGGATAGGGTATCCTGTTGCGCAGCGATATCCGCCTCAGCCTGTGTGCCGAACGCAAGCATTAATGTTA ACCATAACTATTTGGACAATTATTAAAAAGCGTTTATGTTTAGCCAGTTTTGTTAGAAATCAGACTCGCTGAGCCGGCGTTAAAAATTTTAACACGCCGCTATTTTGGCGGCGTGTCGCAAAGAGATTCTCAGAACCCGATTTCCGTTTGTACGCCAAAATTCCACGTACCTCCGGCGCGACAGCCGGCCTGTCTTATTTTTTTCAAAAGTATCCAACGCTATTCCACGGATAGGGTATCCTGTTGCGCAGCGATATCCGCCTCAGCCTGTGTGCCGAACGCAAGCATTAATGTTAATGGAAGCCTCAGATGACCTCTTTT TAACATTAATGCTTGCGTTCGGCACACAGGCTGAGGCGGATATCGCTGCGCAACAGGATACCCTATCCGTGGAATAGCGTTGGATACTTTTGAAAAAAATAAGACAGGCCGGCTGTCGCGCCGGAGGTACGTGGAATTTTGGCGTACAAACGGAAATCGGGTTCTGAGAATCTCTTTGCGACACGCCGCCAAAATAGCGGCGTGT 205 TTerm_0171 NC_003197.2 1741020 1741028 9 1741033 1741041 9 4 100 0 18 22 77 22 77 0 1741030 GCTCCCCTG CAGGGGAGC True ATCCTGTCG ATTTTCGGA False True + GCTCCCCTG CGCT CAGGGGAGC ATTTTCGGA 76 STM1647 intergenic 1741012 1741113 + down TCCTGTCGCTCCCCTGCGCTCAGGGGAGCATTTTCGGATAACCCCTGAAGATCTATCCGGTCATATCATTACTATAGTCAGTGTTAACTATCAGATTACAG AGCCTGCCCGAACGCGCTGTTCTAATCCTGTCGCTCCCCTGCGCTCAGGGGAGCATTTTCGGATAACCCCTGAAGATCTATCCGGTCATATCATTACTATAGTCAGTGTTAACTATCAGATTACAGAGAATATCAATGAAGAAAATCGTCA TCCTGTCGCTCCCCTGCGCTCAGGGGAGC 29 TTerm_0172 NC_003197.2 1776139 1776151 13 1776158 1776170 13 6 100 0 26 46 53 46 53 0 1776154 ACAAGAAGGCCTC GAGGCCTTCTTGT True CTTTTGTCA TTTCTACTC False True + ACAAGAAGGCCTC TATCCG GAGGCCTTCTTGT TTTCTACTC 92 STM1682 intergenic 1776084 1776174 + down GCCAGCGCCTGCTGGCGCTACGTTTGTCAGTGCTACAGGCGGTGCTCTTTTGTCACAAGAAGGCCTCTATCCGGAGGCCTTCTTGTTTTC CGCGCTTAATGTCCTGAAGGCATAAGCCAGCGCCTGCTGGCGCTACGTTTGTCAGTGCTACAGGCGGTGCTCTTTTGTCACAAGAAGGCCTCTATCCGGAGGCCTTCTTGTTTTCTACTCTTCACCCTTCTTCTGGCTCA GCCAGCGCCTGCTGGCGCTACGTTTGTCAGTGCTACAGGCGGTGCTCTTTTGTCACAAGAAGGCCTCTATCCGGAGGCCTTCTTGT 86 TTerm_0173 NC_003197.2 1776139 1776151 13 1776158 1776170 13 6 100 0 26 46 53 46 53 0 1776154 ACAAGAAGGCCTC GAGGCCTTCTTGT True CTTTTGTCA TTTCTACTC False True + ACAAGAAGGCCTC TATCCG GAGGCCTTCTTGT TTTCTACTC 92 STM1683 intergenic 1776084 1776174 - down GAAAACAAGAAGGCCTCCGGATAGAGGCCTTCTTGTGACAAAAGAGCACCGCCTGTAGCACTGACAAACGTAGCGCCAGCAGGCGCTGGC TGAGCCAGAAGAAGGGTGAAGAGTAGAAAACAAGAAGGCCTCCGGATAGAGGCCTTCTTGTGACAAAAGAGCACCGCCTGTAGCACTGACAAACGTAGCGCCAGCAGGCGCTGGCTTATGCCTTCAGGACATTAAGCGCG GCCAGCGCCTGCTGGCGCTACGTTTGTCAGTGCTACAGGCGGTGCTCTTTTGTCACAAGAAGGCCTCTATCCGGAGGCCTTCTTGT 86 TTerm_0174 NC_003197.2 1796292 1796303 12 1796311 1796322 12 7 100 0 24 41 58 41 58 0 1796306 AACGGCCTTTGC GCAAAGGCCGTT True GCTCACTCA TCTTTTCTT False True + AACGGCCTTTGC TGAGAAG GCAAAGGCCGTT TCTTTTCTT 72 STM1702 intergenic 1796274 1796527 + down CCACGCTTAGCTCACTCAACGGCCTTTGCTGAGAAGGCAAAGGCCGTTTCTTTTCTTCTTCTCCCTTCCGTCATGCTCTAAGTTTAATCTTATTCAAGCGCCCCATTTCTTGTTATTTTTAGCTGGCGACTATGCTTTTTCCAGAATCTGGATTACATATGAATACATAGATAAAACAATACGTTCAGCCATAATTACCCTTATTTATAACATGGCTAACCTTTCTTTTCGGGCACCTGGCGCTTAAATGGGA CATTATTGCCCGACCGGCAGCGTAACCACGCTTAGCTCACTCAACGGCCTTTGCTGAGAAGGCAAAGGCCGTTTCTTTTCTTCTTCTCCCTTCCGTCATGCTCTAAGTTTAATCTTATTCAAGCGCCCCATTTCTTGTTATTTTTAGCTGGCGACTATGCTTTTTCCAGAATCTGGATTACATATGAATACATAGATAAAACAATACGTTCAGCCATAATTACCCTTATTTATAACATGGCTAACCTTTCTTTTCGGGCACCTGGCGCTTAAATGGGATGGTACGCATGATGAAACAGATTCA CCACGCTTAGCTCACTCAACGGCCTTTGCTGAGAAGGCAAAGGCCGTT 48 TTerm_0175 NC_003197.2 1800222 1800231 10 1800240 1800249 10 8 100 0 20 30 70 30 70 0 1800235 ACGCCACGGT ACCGTGGCGT True TGACTTTTA TTTCATTAG False True + ACGCCACGGT AATTTACA ACCGTGGCGT TTTCATTAG 72 STM1705 intergenic 1800135 1800255 + down TCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGTTTTCAT GATTGGTCACCAGGTTGGAAAATAATCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGTTTTCATTAGCCGCCAGCTAATTTTACTTTCA TCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGT 114 TTerm_0176 NC_003197.2 1800222 1800231 10 1800240 1800249 10 8 100 0 20 30 70 30 70 0 1800235 ACGCCACGGT ACCGTGGCGT True TGACTTTTA TTTCATTAG False True + ACGCCACGGT AATTTACA ACCGTGGCGT TTTCATTAG 72 STM1706 intergenic 1800135 1800255 - down ATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGAGCCGTTCAATATTTAAACGTCTGGA TGAAAGTAAAATTAGCTGGCGGCTAATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGAGCCGTTCAATATTTAAACGTCTGGATTATTTTCCAACCTGGTGACCAATC TCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGT 114 TTerm_0177 NC_003197.2 1816721 1816729 9 1816734 1816742 9 4 88 0 13 27 72 25 75 0 1816731 AACGGCGCG CGCGCCATT True GGAGAATGA TTAAGGCCG False True + AACGGCGCG TTGC CGCGCCATT TTAAGGCCG 74 STM1720 intergenic 1816684 1816774 - down AGGGCGTAAGCCTGTATACTACGCGGCCTTAAAATGGCGCGGCAACGCGCCGTTCATTCTCCTGTTCGACGCCTGTGAAGGCGACACCTG TCGGCGACGTTACACCTTTCTTATAAGGGCGTAAGCCTGTATACTACGCGGCCTTAAAATGGCGCGGCAACGCGCCGTTCATTCTCCTGTTCGACGCCTGTGAAGGCGACACCTGAAGGAAGCTCTATGAGCGAAAAGTT CAGGTGTCGCCTTCACAGGCGTCGAACAGGAGAATGAACGGCGCGTTGCCGCGCCATT 58 TTerm_0178 NC_003197.2 1818495 1818500 6 1818508 1818513 6 7 100 0 12 0 100 0 100 0 1818503 GCCCGC GCGGGC True GATACCCGG TTTTTTTTG False True + GCCCGC CTGTTAA GCGGGC TTTTTTTTG 72 STM1722 intergenic 1818449 1818534 + down TAGCGGGCGGTGTATGAACAGCTGTAATCAGCCAAACGATACCCGGCCCGCCTGTTAAGCGGGCTTTTTTTTGAACAAAATAATG ACACGGTTGGTGGCGCACTTCCTGATAGCGGGCGGTGTATGAACAGCTGTAATCAGCCAAACGATACCCGGCCCGCCTGTTAAGCGGGCTTTTTTTTGAACAAAATAATGAGAATAACCATGCAAACACCAAAAC TAGCGGGCGGTGTATGAACAGCTGTAATCAGCCAAACGATACCCGGCCCGCCTGTTAAGCGGGC 64 TTerm_0179 NC_003197.2 1825777 1825783 7 1825792 1825798 7 8 100 0 14 28 71 28 71 0 1825787 CTGCGAG CTCGCAG True CAAGCAATC TATTTTGCC False True + CTGCGAG TCTTCTGG CTCGCAG TATTTTGCC 60 STM1728 intergenic 1825734 1825808 + down TTTACTGTAATGTAAATATAACACATGCTTTTATCAAGCAATCTGCGAGTCTTCTGGCTCGCAGTATTTTGCCC CGGACGTAAATCCGATAATTCCTGATTTACTGTAATGTAAATATAACACATGCTTTTATCAAGCAATCTGCGAGTCTTCTGGCTCGCAGTATTTTGCCCAGGAGAATTAGATTTATGAATATCA TTTACTGTAATGTAAATATAACACATGCTTTTATCAAGCAATCTGCGAGTCTTCTGGCTCGCAG 64 TTerm_0180 NC_003197.2 1878718 1878725 8 1878730 1878737 8 4 100 0 16 37 62 37 62 0 1878727 AAACCCGC GCGGGTTT True CGGATCTGA TTTTGTCTG False True + AAACCCGC TGCG GCGGGTTT TTTTGTCTG 72 STM1780 intergenic 1878702 1878851 + down TCGAACCCGGATCTGAAACCCGCTGCGGCGGGTTTTTTTGTCTGTAACACCCTTTTGTATGACTTATGCCTCCTTCACCTGCCATTTAGTTGACAGATGATGCGCTCATGGATGAAACATTATTGTGAACAAATTATTTTCCTCACATG GATTTCCGCCATGTTCGAGCATTGATCGAACCCGGATCTGAAACCCGCTGCGGCGGGTTTTTTTGTCTGTAACACCCTTTTGTATGACTTATGCCTCCTTCACCTGCCATTTAGTTGACAGATGATGCGCTCATGGATGAAACATTATTGTGAACAAATTATTTTCCTCACATGTGATGCCTTTCCGCGCTCTCATCGA TCGAACCCGGATCTGAAACCCGCTGCGGCGGGTTT 35 TTerm_0181 NC_003197.2 1882962 1882972 11 1882977 1882987 11 4 100 0 22 54 45 54 45 0 1882974 AAAATCCACGC GCGTGGATTTT True AAAGTCATA TTATTTCAT True True + AAAATCCACGC AGCC GCGTGGATTTT TTATTTCAT 84 STM1784 intergenic 1882903 1883062 + down ATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTTTTATTTCATAATATCTCAACTCATACTGACAGGCTCAATTAACGCAGAGCTAACAGGGTAAGTTCTTTTCTTAAT AATGAACTTCCTGTTCAACGTCTAAATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTTTTATTTCATAATATCTCAACTCATACTGACAGGCTCAATTAACGCAGAGCTAACAGGGTAAGTTCTTTTCTTAATTACCAGTCGACATTCACTGTATGGT ATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTT 84 TTerm_0182 NC_003197.2 1882962 1882972 11 1882977 1882987 11 4 100 0 22 54 45 54 45 0 1882974 AAAATCCACGC GCGTGGATTTT True AAAGTCATA TTATTTCAT True True + AAAATCCACGC AGCC GCGTGGATTTT TTATTTCAT 84 STM1785 intergenic 1882903 1883062 - down ATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTTTATGACTTTCTTTGCCTCTTATGAGATTCAGCAAAACCTCACGAGACAACAAATTTTAT ACCATACAGTGAATGTCGACTGGTAATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTTTATGACTTTCTTTGCCTCTTATGAGATTCAGCAAAACCTCACGAGACAACAAATTTTATTTAGACGTTGAACAGGAAGTTCATT ATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTT 84 TTerm_0183 NC_003197.2 1893189 1893200 12 1893207 1893218 12 6 91 0 19 37 62 36 63 0 1893203 AACCGGGGTCAG CTGACTCCGGTT True AAGAGGTAA ATTTTTATC False True + AACCGGGGTCAG CGCCGT CTGACTCCGGTT ATTTTTATC 62 STM1794 intergenic 1893181 1893520 + down AGAGGTAAACCGGGGTCAGCGCCGTCTGACTCCGGTTATTTTTATCTTTTTACGCGCCTGGTGAAGACGTTTCCCCGCCGACAGGACGACATAACATTGATACATGTCGTTATCATAACGTTTACTTTTAGAGGTGCGTCATAATTATGACAAATAGCCACCTTGCACATATTTCGCATATTTAAGCAATTAATTGCATAATTAGCAATATATCACCTCTTATAGCGGATAGTTAACCACTTCCCATCCAAAATCATAACGAAAATCCAACTGCCTGCCATTTTTGATCTGAGTTAATTGTTTAAAAAAGTGTTAAATTTATCGCTACATGGTGTGATC ATGGCTTGAGTCGCGTCAACAATAAAGAGGTAAACCGGGGTCAGCGCCGTCTGACTCCGGTTATTTTTATCTTTTTACGCGCCTGGTGAAGACGTTTCCCCGCCGACAGGACGACATAACATTGATACATGTCGTTATCATAACGTTTACTTTTAGAGGTGCGTCATAATTATGACAAATAGCCACCTTGCACATATTTCGCATATTTAAGCAATTAATTGCATAATTAGCAATATATCACCTCTTATAGCGGATAGTTAACCACTTCCCATCCAAAATCATAACGAAAATCCAACTGCCTGCCATTTTTGATCTGAGTTAATTGTTTAAAAAAGTGTTAAATTTATCGCTACATGGTGTGATCTACTATGTACCACGGTCAATTAAAG AGAGGTAAACCGGGGTCAGCGCCGTCTGACTCCGGTT 37 TTerm_0184 NC_003197.2 1894870 1894879 10 1894886 1894895 10 6 100 0 20 60 40 60 40 0 1894882 AAAATCCACG CGTGGATTTT True ATTGCGCTA TTGTCTGTA True True + AAAATCCACG TCCCGG CGTGGATTTT TTGTCTGTA 72 STM1795 intergenic 1894850 1894974 + down GGCGACAAATCATTGCGCTAAAATCCACGTCCCGGCGTGGATTTTTTGTCTGTATACCCCGTTTTCCACGCGCGCGCCGATAAATTCTGTCTCAATAAAATGTCTGTTTGTTCGCAAAATAGCG AGATCGCGGTATCTATCCAGGTTAAGGCGACAAATCATTGCGCTAAAATCCACGTCCCGGCGTGGATTTTTTGTCTGTATACCCCGTTTTCCACGCGCGCGCCGATAAATTCTGTCTCAATAAAATGTCTGTTTGTTCGCAAAATAGCGGTTCAATCACGCGTATCTGGTCATC GGCGACAAATCATTGCGCTAAAATCCACGTCCCGGCGTGGATTTT 45 TTerm_0185 NC_003197.2 1908373 1908379 7 1908388 1908394 7 8 100 0 14 0 100 0 100 0 1908383 GCCGGGC GCCCGGC True AACGTTTGG TCCGATTTT False True + GCCGGGC AATACACC GCCCGGC TCCGATTTT 76 STM1806 intergenic 1908366 1908495 + down CGTTTGGCCGGGCAATACACCGCCCGGCTCCGATTTTTGCCTGATAATTATCCAATTACACATTATTTCATTTCCCGCTAGTGGCGCACGAATTGAATTGGTTTACACTGCGGTCTCTACGCATGTTGC AGGATGGTTAGCAACGCTTTCGTAACGTTTGGCCGGGCAATACACCGCCCGGCTCCGATTTTTGCCTGATAATTATCCAATTACACATTATTTCATTTCCCGCTAGTGGCGCACGAATTGAATTGGTTTACACTGCGGTCTCTACGCATGTTGCAGGGAAATTATTATGTTGCGATTTT CGTTTGGCCGGGCAATACACCGCCCGGC 28 TTerm_0186 NC_003197.2 1909044 1909050 7 1909055 1909061 7 4 100 0 14 28 71 28 71 0 1909052 ACGCTCC GGAGCGT True TGATACACA TTTTTTTGC False True + ACGCTCC TTCG GGAGCGT TTTTTTTGC 68 STM1807 intergenic 1909038 1909141 + down TACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGAT AAAACGCGACCTGTTCGGTCGTTGATACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGATGTCTTATGTCCCACTTACGCATCCC TACACACGCTCCTTCGGGAGCGT 23 TTerm_0187 NC_003197.2 1909089 1909105 17 1909111 1909127 17 5 94 0 29 73 26 75 25 0 1909107 GTGATTAAAAGGTGTAT ATACATCTTTTAATCAC True GTTTGCCAG CACATCAGG True True + GTGATTAAAAGGTGTAT ATTAA ATACATCTTTTAATCAC CACATCAGG 66 STM1807 intergenic 1909038 1909141 + down TACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGAT AAAACGCGACCTGTTCGGTCGTTGATACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGATGTCTTATGTCCCACTTACGCATCCC TACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCAC 89 TTerm_0188 NC_003197.2 1910924 1910931 8 1910938 1910945 8 6 87 0 11 31 68 28 71 0 1910934 TTACCGCC GGCGGCAA True TGCAAGTTT GCAGATTTT False True + TTACCGCC GCTGAA GGCGGCAA GCAGATTTT 70 STM1812 intergenic 1910894 1910953 - down AAATCTGCTTGCCGCCTTCAGCGGCGGTAAAACTTGCATCTGCAGGCCAGACTGGTTAT AAACGTTGTCTACCCGCGTTCTGTAAAATCTGCTTGCCGCCTTCAGCGGCGGTAAAACTTGCATCTGCAGGCCAGACTGGTTATAAGGTGCAGCTTTAGTGCAATGGCG ATAACCAGTCTGGCCTGCAGATGCAAGTTTTACCGCCGCTGAAGGCGGCAA 51 TTerm_0189 NC_003197.2 1913921 1913933 13 1913938 1913950 13 4 100 0 26 69 30 69 30 0 1913935 TAAAAAAGGCAGA TCTGCCTTTTTTA True TCCTGGATT TTTTTTTAC True True + TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA TTTTTTTAC 84 STM1816 intergenic 1913894 1914016 + down GCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTATTTTTTTACATTATTCCGAATACGGACATTTATTTCACTGGCCGTTTTCCCGGCAATTACCGTCGT GCCGGAAGCCGAAGAGTCAAAATAAGCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTATTTTTTTACATTATTCCGAATACGGACATTTATTTCACTGGCCGTTTTCCCGGCAATTACCGTCGTTAAAGCGGATACTCCTGCAACAGAA GCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTA 56 TTerm_0190 NC_003197.2 1913921 1913933 13 1913938 1913950 13 4 100 0 26 69 30 69 30 0 1913935 TAAAAAAGGCAGA TCTGCCTTTTTTA True TCCTGGATT TTTTTTTAC True True + TAAAAAAGGCAGA AGAA TCTGCCTTTTTTA TTTTTTTAC 84 STM1817 intergenic 1913894 1914016 - down ACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTTAATCCAGGAATTTTCCCATAAAAGAGC TTCTGTTGCAGGAGTATCCGCTTTAACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTTAATCCAGGAATTTTCCCATAAAAGAGCTTATTTTGACTCTTCGGCTTCCGGC GCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTA 56 TTerm_0191 NC_003197.2 1917059 1917069 11 1917075 1917085 11 5 100 0 22 45 54 45 54 0 1917071 AGAAACAGCGG CCGCTGTTTCT True ATGAATGCA TTTATTGAT False True + AGAAACAGCGG ACCAG CCGCTGTTTCT TTTATTGAT 84 STM1819 intergenic 1916912 1917106 - down ACTCTTTGTTTTATCAATAAAAGAAACAGCGGCTGGTCCGCTGTTTCTGCATTCATAGAGACATAATAAAAATAAATAGTGACGCGCTTCGCAACCTTTCAGTTGCGTAATTAATAAACTGGTACGCTGAGTTAATATAATGTTAACGACTTGTTTATTAACTGGGGTTGTGATGACGACGAACACTCATTTTA AGGTTCAGACGATAGTAACAGAGTAACTCTTTGTTTTATCAATAAAAGAAACAGCGGCTGGTCCGCTGTTTCTGCATTCATAGAGACATAATAAAAATAAATAGTGACGCGCTTCGCAACCTTTCAGTTGCGTAATTAATAAACTGGTACGCTGAGTTAATATAATGTTAACGACTTGTTTATTAACTGGGGTTGTGATGACGACGAACACTCATTTTAGAGGTGATGCATTGAAGAAGGTTTG TAAAATGAGTGTTCGTCGTCATCACAACCCCAGTTAATAAACAAGTCGTTAACATTATATTAACTCAGCGTACCAGTTTATTAATTACGCAACTGAAAGGTTGCGAAGCGCGTCACTATTTATTTTTATTATGTCTCTATGAATGCAGAAACAGCGGACCAGCCGCTGTTTCT 173 TTerm_0192 NC_003197.2 1924755 1924764 10 1924772 1924781 10 7 100 0 20 40 60 40 60 0 1924767 TTCGCCCATC GATGGGCGAA True CCCCTCCCT ATTTTTATC False True + TTCGCCCATC TGCTACG GATGGGCGAA ATTTTTATC 72 STM1826 intergenic 1924737 1924773 + down ACGCCGTTTCCCCTCCCTTCGCCCATCTGCTACGGA GGCTATTAAAGTCCAGTGTGATTAAACGCCGTTTCCCCTCCCTTCGCCCATCTGCTACGGATGGGCGAAATTTTTATCTCTTCCTC ACGCCGTTTCCCCTCCCTTCGCCCATCTGCTACGGATGGGCGAA 44 TTerm_0193 NC_003197.2 1931232 1931238 7 1931243 1931249 7 4 100 0 14 0 100 0 100 0 1931240 CGGGGCC GGCCCCG True TACACTACC TTTTTTATT False True + CGGGGCC AAAC GGCCCCG TTTTTTATT 76 STM1832 intergenic 1931215 1931262 + down GGCTGTTGTACACTACCGGGGCCAAACGGCCCCGTTTTTTATTTCTC CTCCGTAGGACTGCTGGGCCAGTAAGGCTGTTGTACACTACCGGGGCCAAACGGCCCCGTTTTTTATTTCTCTGGAGGATAAATGACTATCACGGAC GGCTGTTGTACACTACCGGGGCCAAACGGCCCCG 34 TTerm_0194 NC_003197.2 1931780 1931787 8 1931792 1931799 8 4 100 0 16 75 25 75 25 0 1931789 AATATAGC GCTATATT True CGAATCATA TTCTATTGA False True + AATATAGC TAAG GCTATATT TTCTATTGA 48 STM1833 intergenic 1931743 1932075 + down CCTCAACTATGTTTTTCGAATTTTATTTCGAATCATAATATAGCTAAGGCTATATTTTCTATTGACCAATTGTTATTTAATTTAACGTTTTATTGATGAATAAATCTAAATGAAAATCGTTTTCAATTGAAAGACAAATAATATTTTATCGCTGTTGTTTTATATTCTAAAAATATGTTAATGTTGCGCCGTCAATTGGGGAGTAGCCGATTTCCAGACTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCGCGTACGGACCAGCCGCCGCTGGTCAGGCGAGACCATAGGCGCATCAACTGCTGTGTATTTCGTCACAGAA TGAAAATCAATATCTTAAGATATAGCCTCAACTATGTTTTTCGAATTTTATTTCGAATCATAATATAGCTAAGGCTATATTTTCTATTGACCAATTGTTATTTAATTTAACGTTTTATTGATGAATAAATCTAAATGAAAATCGTTTTCAATTGAAAGACAAATAATATTTTATCGCTGTTGTTTTATATTCTAAAAATATGTTAATGTTGCGCCGTCAATTGGGGAGTAGCCGATTTCCAGACTCCGGAAATGTACGTGTCAACATACTCGTTGCAAAACGTGGCGCGTACGGACCAGCCGCCGCTGGTCAGGCGAGACCATAGGCGCATCAACTGCTGTGTATTTCGTCACAGAATGGCGACATGCATGTTTGCTGGGGG CCTCAACTATGTTTTTCGAATTTTATTTCGAATCATAATATAGCTAAGGCTATATT 56 TTerm_0195 NC_003197.2 1937608 1937622 15 1937630 1937644 15 7 100 0 30 66 33 66 33 0 1937625 AAAAAAAGCAGCTAC GTAGCTGCTTTTTTT True GATGTTATA TAACGTCAT True True + AAAAAAAGCAGCTAC ATTTTTC GTAGCTGCTTTTTTT TAACGTCAT 84 STM1841 intergenic 1937456 1937668 + down GCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTTTAACGTCATGCTAATAACGTTGCT CGCCACCGTGGTGGATAATGGCTAAGCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTTTAACGTCATGCTAATAACGTTGCTTAGAAGGGATAATCGTTGTAACCCA GCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTT 188 TTerm_0196 NC_003197.2 1937608 1937622 15 1937630 1937644 15 7 100 0 30 66 33 66 33 0 1937625 AAAAAAAGCAGCTAC GTAGCTGCTTTTTTT True GATGTTATA TAACGTCAT True True + AAAAAAAGCAGCTAC ATTTTTC GTAGCTGCTTTTTTT TAACGTCAT 84 STM1842 intergenic 1937456 1937668 - down AGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTTTATAACATCGGGTGGGATGAAATCGTAAAAGTAGATAATATCTGTCGGCTTATTTAACGGTTATTAAAATATTATTTAACAGTACTTATGAACAACAGCCAATATAGGGGAATTATTGGTGATAGTTTCACTGTGAAATTATTTATTGCCGC TGGGTTACAACGATTATCCCTTCTAAGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTTTATAACATCGGGTGGGATGAAATCGTAAAAGTAGATAATATCTGTCGGCTTATTTAACGGTTATTAAAATATTATTTAACAGTACTTATGAACAACAGCCAATATAGGGGAATTATTGGTGATAGTTTCACTGTGAAATTATTTATTGCCGCTTAGCCATTATCCACCACGGTGGCG GCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTT 188 TTerm_0197 NC_003197.2 1940010 1940020 11 1940025 1940035 11 4 100 0 22 45 54 45 54 0 1940022 AAAAGCGCGTC GACGCGCTTTT True GGCGTAAAA CATACTTGC True True + AAAAGCGCGTC ATTC GACGCGCTTTT CATACTTGC 84 STM1843 intergenic 1940008 1940056 + down AAAAAGCGCGTCATTCGACGCGCTTTTCATACTTGCCAGTGGGCTTAT TACGCAACCACGCGTTCAGGCGTAAAAAAAGCGCGTCATTCGACGCGCTTTTCATACTTGCCAGTGGGCTTATTATTTCAGGTACTCGCCGCTACGCA AAAAAGCGCGTCATTCGACGCGCTTTT 27 TTerm_0198 NC_003197.2 1940010 1940020 11 1940025 1940035 11 4 100 0 22 45 54 45 54 0 1940022 AAAAGCGCGTC GACGCGCTTTT True GGCGTAAAA CATACTTGC True True + AAAAGCGCGTC ATTC GACGCGCTTTT CATACTTGC 84 STM1844 intergenic 1940008 1940056 - down ATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTTTT TGCGTAGCGGCGAGTACCTGAAATAATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTTTTTTACGCCTGAACGCGTGGTTGCGTA AAAAAGCGCGTCATTCGACGCGCTTTT 27 TTerm_0199 NC_003197.2 1948502 1948510 9 1948517 1948525 9 6 100 0 18 11 88 11 88 0 1948513 GCTCCGGCG CGCCGGAGC True AACACCAGG GTTTTATGC False True + GCTCCGGCG TACTCG CGCCGGAGC GTTTTATGC 84 STM1849 intergenic 1948494 1948558 + down ACACCAGGCTCCGGCGTACTCGCGCCGGAGCGTTTTATGCTACACTGCGCGCCTGTTTTTTTGC ATGGGGCACCGCTCTGCCACGTTAAACACCAGGCTCCGGCGTACTCGCGCCGGAGCGTTTTATGCTACACTGCGCGCCTGTTTTTTTGCCGGCGATACACCTGTGGCTCAACAC ACACCAGGCTCCGGCGTACTCGCGCCGGAGC 31 TTerm_0200 NC_003197.2 1968241 1968257 17 1968264 1968280 17 6 94 0 29 67 32 68 31 0 1968260 AAAAAACCGTAAGCCTT AAGGTTTACGGTTTTTT True CAGAGATAA ATTAAAAAT True True + AAAAAACCGTAAGCCTT TTCGTG AAGGTTTACGGTTTTTT ATTAAAAAT 74 STM1873 intergenic 1968239 1968293 - down ACTGATTTTTAATAAAAAACCGTAAACCTTCACGAAAAGGCTTACGGTTTTTTT AGCTTTGTGATCCATCCAATAGCTGACTGATTTTTAATAAAAAACCGTAAACCTTCACGAAAAGGCTTACGGTTTTTTTATCTCTGATAACAGACAAAACGCCA AAAAAAACCGTAAGCCTTTTCGTGAAGGTTTACGGTTTTTT 41 TTerm_0201 NC_003197.2 2004350 2004362 13 2004368 2004380 13 5 92 0 21 30 69 33 66 0 2004364 AGGCCTGACTCCG CGGACTCAGGCCT True ACATCATCA TTTTATTGC False True + AGGCCTGACTCCG GATAA CGGACTCAGGCCT TTTTATTGC 74 STM1909 intergenic 2004327 2004509 + down ACGCGCCGTCGTTAACATCATCAGGCCTGACTCCGGATAACGGACTCAGGCCTTTTTATTGCCACAGCGGTATATCTGTAACAAATCACAAGGAATGACACATTTCTATAGAGAGATGGAACATCTTTTACCTGTGCTGGCGCTGACCGCCCCGTATCATTAGGCGGCGGATTGTTCAGGTA TATCGAAACCGTAGAACGCATGTAAACGCGCCGTCGTTAACATCATCAGGCCTGACTCCGGATAACGGACTCAGGCCTTTTTATTGCCACAGCGGTATATCTGTAACAAATCACAAGGAATGACACATTTCTATAGAGAGATGGAACATCTTTTACCTGTGCTGGCGCTGACCGCCCCGTATCATTAGGCGGCGGATTGTTCAGGTACAGGTAATGACTTTTAAAGACTTTG ACGCGCCGTCGTTAACATCATCAGGCCTGACTCCGGATAACGGACTCAGGCCT 53 TTerm_0202 NC_003197.2 2035528 2035533 6 2035538 2035543 6 4 100 0 12 50 50 50 50 0 2035535 GCCAAA TTTGGC True GTTAACGCG TTTTCAGCC False True + GCCAAA TTTT TTTGGC TTTTCAGCC 48 STM1944 intergenic 2035531 2035587 - down CTCCAGTTTAAAAGCATTGGCGTAAAGCGGATGCTGGCTGAAAAGCCAAAAAAATT TCGCGAGTTCGAGTCTCGTTTCCCGCTCCAGTTTAAAAGCATTGGCGTAAAGCGGATGCTGGCTGAAAAGCCAAAAAAATTTGGCGCGTTAACAAAGCGGTTATGT AATTTTTTTGGC 12 TTerm_0203 NC_003197.2 2071587 2071598 12 2071605 2071616 12 6 100 0 24 33 66 33 66 0 2071601 CAAAACGCCCGG CCGGGCGTTTTG True CTCCACAGC TCATCGGGC True True + CAAAACGCCCGG CATTAA CCGGGCGTTTTG TCATCGGGC 96 STM1988 intergenic 2071466 2071617 - down ACAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATGCCAGGATTGAGTGGTATCCCTTGATGAGGTCTGGCTACCGTAAGCCATCAGGGGGAGTTGTATCAATAAC GGCGCGTGCGGGACGAAGCCCGATGACAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATGCCAGGATTGAGTGGTATCCCTTGATGAGGTCTGGCTACCGTAAGCCATCAGGGGGAGTTGTATCAATAACCAGGAGTTACCAGGGTGCCGCACGA GTTATTGATACAACTCCCCCTGATGGCTTACGGTAGCCAGACCTCATCAAGGGATACCACTCAATCCTGGCATAACCAGGTAGCAGCATGTCGCAGCGCGACGACTCTTTTTCTCCACAGCAAAACGCCCGGCATTAACCGGGCGTTTTG 150 TTerm_0204 NC_003197.2 2079629 2079636 8 2079641 2079648 8 4 87 0 11 93 6 100 0 0 2079638 AAAAAAAT ATTGTTTT True GTTTTGTTA TTAGCATTA False True + AAAAAAAT ATTA ATTGTTTT TTAGCATTA 30 STM1997 intergenic 2079448 2079889 - down ACTTGTGCGATCAATGCCTGAGATGGTTGCCAAATCATCCCCGTTCTCTAACCGGTTTTGGTCGCACAAGATCACAGGAACCTCTCACGATGAGGCGCATGTATCCTGGTTTACGACATCAGAAAATGTGGCGCGTTTATTGCCCGGCAGGCGTTGTGAGACGTCACTTATTTACGCCAGGTTTCAGCCGTAGCGACAGGCATGAATAAAAAGAGTATGGCAATCAGCGTGATAATGCTAAAAAACAATTAATATTTTTTTAACAAAACTAAAGCTTGCTATGTTCAGTTAACCATGCGTTAATGGTTGTGCGGTTTGATACAAACTTATCTGAAGTAGTGATTGTAATATTTCTCATCATTTGTTCCTCTTGAGATCTCCTTTAGGTTTTTTTCTCTCTGATAATTTTCTTCAGGCCATTTTGCCCAAGGGCTCATTCGA ACTCTGATCTACTGCGTGTTAAGTAACTTGTGCGATCAATGCCTGAGATGGTTGCCAAATCATCCCCGTTCTCTAACCGGTTTTGGTCGCACAAGATCACAGGAACCTCTCACGATGAGGCGCATGTATCCTGGTTTACGACATCAGAAAATGTGGCGCGTTTATTGCCCGGCAGGCGTTGTGAGACGTCACTTATTTACGCCAGGTTTCAGCCGTAGCGACAGGCATGAATAAAAAGAGTATGGCAATCAGCGTGATAATGCTAAAAAACAATTAATATTTTTTTAACAAAACTAAAGCTTGCTATGTTCAGTTAACCATGCGTTAATGGTTGTGCGGTTTGATACAAACTTATCTGAAGTAGTGATTGTAATATTTCTCATCATTTGTTCCTCTTGAGATCTCCTTTAGGTTTTTTTCTCTCTGATAATTTTCTTCAGGCCATTTTGCCCAAGGGCTCATTCGAAAGGTAACAATATTATGACGACGAA TCGAATGAGCCCTTGGGCAAAATGGCCTGAAGAAAATTATCAGAGAGAAAAAAACCTAAAGGAGATCTCAAGAGGAACAAATGATGAGAAATATTACAATCACTACTTCAGATAAGTTTGTATCAAACCGCACAACCATTAACGCATGGTTAACTGAACATAGCAAGCTTTAGTTTTGTTAAAAAAATATTAATTGTTTT 200 TTerm_0205 NC_003197.2 2115410 2115424 15 2115429 2115444 16 4 93 6 20 58 41 60 40 0 2115426 ATCAAAAGTCTCCCA TGGGAGACGTTTTGAT True ATGACAATA CAGTTCGTG True True + ATCAAAAGTCTCCCA TTGC TGGGAGACGTTTTGAT CAGTTCGTG 72 STM2037 intergenic 2115320 2115524 - down AGGAAATGCGAACCAGATTCACAGCAATGATGTATCGTAAAAACAGGTGAGATAATTTCGTGATCTGCTTTCACGAACTGATCAAAACGTCTCCCAGCAATGGGAGACTTTTGATATTGTCATTGTACTTTTTATCAGGGCCAGGATAATGGTAATAAAAAGTGAATGTAAATAATGTGTTTTGTTTATAACAATAAATTAACT TACCTTGTAACCGCTGTGAACTGTAAGGAAATGCGAACCAGATTCACAGCAATGATGTATCGTAAAAACAGGTGAGATAATTTCGTGATCTGCTTTCACGAACTGATCAAAACGTCTCCCAGCAATGGGAGACTTTTGATATTGTCATTGTACTTTTTATCAGGGCCAGGATAATGGTAATAAAAAGTGAATGTAAATAATGTGTTTTGTTTATAACAATAAATTAACTGAGGGGTTTTATCATGATTTCTGCG AGTTAATTTATTGTTATAAACAAAACACATTATTTACATTCACTTTTTATTACCATTATCCTGGCCCTGATAAAAAGTACAATGACAATATCAAAAGTCTCCCATTGCTGGGAGACGTTTTGAT 124 TTerm_0206 NC_003197.2 2135351 2135359 9 2135368 2135376 9 8 100 0 18 22 77 22 77 0 2135363 GCGGACGGA TCCGTCCGC True GCGCACTGG TCTTTTCAG False True + GCGGACGGA ACACATTA TCCGTCCGC TCTTTTCAG 68 STM2061 intergenic 2135296 2135402 - down ATCGACTGGTTTCCTGGCTGAAAAGAGCGGACGGATAATGTGTTCCGTCCGCCAGTGCGCTATTTTTGCTATAAAGCAGGTACAATGCATTTTTTGCCATTCCCGT TGTATATTCCGGTACAGCGGAAGTGATCGACTGGTTTCCTGGCTGAAAAGAGCGGACGGATAATGTGTTCCGTCCGCCAGTGCGCTATTTTTGCTATAAAGCAGGTACAATGCATTTTTTGCCATTCCCGTAAGGAGCGCAAGCGTGCGTGCCGAT ACGGGAATGGCAAAAAATGCATTGTACCTGCTTTATAGCAAAAATAGCGCACTGGCGGACGGAACACATTATCCGTCCGC 80 TTerm_0207 NC_003197.2 2159318 2159326 9 2159332 2159340 9 5 100 0 18 33 66 33 66 0 2159328 AAGCCCGGT ACCGGGCTT True ATAAAAAAA AAACATTTT True True + AAGCCCGGT ATTAA ACCGGGCTT AAACATTTT 76 STM2081 intergenic 2159121 2159358 - down ATTTCTGCAAAAATGTTTAAGCCCGGTTTAATACCGGGCTTTTTTTTATCTCTATTCTTATTGATTTATCGCTTTTGCTTAATATTAACTTAATAATCTGTGTTTATCGTAATGAAGATAATCTGAATTGTTTTCGTCTGCGTTGCACTTTATATACTCAGGCGTTAAAACTTTAATATCTTATCAGGATGCGAAATACATCATGATTCATAATTAAGTTAATTCTGAGAGCGAATA TTTTCCATACCGAATGGTTGGAATAATTTCTGCAAAAATGTTTAAGCCCGGTTTAATACCGGGCTTTTTTTTATCTCTATTCTTATTGATTTATCGCTTTTGCTTAATATTAACTTAATAATCTGTGTTTATCGTAATGAAGATAATCTGAATTGTTTTCGTCTGCGTTGCACTTTATATACTCAGGCGTTAAAACTTTAATATCTTATCAGGATGCGAAATACATCATGATTCATAATTAAGTTAATTCTGAGAGCGAATAATGAAAATCACGATATCCGGGACGG TATTCGCTCTCAGAATTAACTTAATTATGAATCATGATGTATTTCGCATCCTGATAAGATATTAAAGTTTTAACGCCTGAGTATATAAAGTGCAACGCAGACGAAAACAATTCAGATTATCTTCATTACGATAAACACAGATTATTAAGTTAATATTAAGCAAAAGCGATAAATCAATAAGAATAGAGATAAAAAAAAGCCCGGTATTAAACCGGGCTT 219 TTerm_0208 NC_003197.2 2231180 2231189 10 2231196 2231205 10 6 100 0 20 40 60 40 60 0 2231192 GCCTGCGTAA TTACGCAGGC True CCTCCTTGG TTATTTTTT False True + GCCTGCGTAA TCTCCC TTACGCAGGC TTATTTTTT 64 STM2136 intergenic 2231043 2231494 + down TTAATTGCGGTTATTTTTTCATGGCGGGAAGATTCTTAGAAATTGATCACATACCGCTTCGCTCAATGCGGGTATTATTCAACGCGCTGAAAAACATAACCCATAAATGCTAGCTGTACCAGGAACCACCTCCTTGGCCTGCGTAATCTCCCTTACGCAGGCTTATTTTTTGCGTATAATCCATAAAAAAGTGGTACTTCCCGCCATATCCAAAATTGACCACACTAACCAAAGCGCAAATGGGCGCTTAGGTTTAGAGACCTCCCCTATCCATTGCCAGCCAGCAAGTCACAATCCTCCCCGCATCCGGTCGGACTCAGGACTTAGCATTGTGACGTTAACGTTTAAAATCAGTGAATTAAATCAATAACTACTTTGTGAGCACTTACACAAAAAGTTTCCAGGTTATTAAATTAAGGTTAAAAACTGATAATTTAAGCGTGTAAAAATA AACGCGTAACCCCCATGCTAAGTAGTTAATTGCGGTTATTTTTTCATGGCGGGAAGATTCTTAGAAATTGATCACATACCGCTTCGCTCAATGCGGGTATTATTCAACGCGCTGAAAAACATAACCCATAAATGCTAGCTGTACCAGGAACCACCTCCTTGGCCTGCGTAATCTCCCTTACGCAGGCTTATTTTTTGCGTATAATCCATAAAAAAGTGGTACTTCCCGCCATATCCAAAATTGACCACACTAACCAAAGCGCAAATGGGCGCTTAGGTTTAGAGACCTCCCCTATCCATTGCCAGCCAGCAAGTCACAATCCTCCCCGCATCCGGTCGGACTCAGGACTTAGCATTGTGACGTTAACGTTTAAAATCAGTGAATTAAATCAATAACTACTTTGTGAGCACTTACACAAAAAGTTTCCAGGTTATTAAATTAAGGTTAAAAACTGATAATTTAAGCGTGTAAAAATATGGCACGTTTTAATGCCGCTTTTAC TTAATTGCGGTTATTTTTTCATGGCGGGAAGATTCTTAGAAATTGATCACATACCGCTTCGCTCAATGCGGGTATTATTCAACGCGCTGAAAAACATAACCCATAAATGCTAGCTGTACCAGGAACCACCTCCTTGGCCTGCGTAATCTCCCTTACGCAGGC 162 TTerm_0209 NC_003197.2 2234926 2234933 8 2234940 2234947 8 6 100 0 16 25 75 25 75 0 2234936 GCCGGATG CATCCGGC True TGTCGCTGG TTTTCTTCG False True + GCCGGATG CGCTCA CATCCGGC TTTTCTTCG 64 STM2140 intergenic 2234910 2234963 + down TAACACCTGTCGCTGGCCGGATGCGCTCACATCCGGCTTTTCTTCGTTGAACT GCCGGACTGCCCGTTGCTACGTTAATAACACCTGTCGCTGGCCGGATGCGCTCACATCCGGCTTTTCTTCGTTGAACTCAGGCGATGGTGACTTTGCTATCCA TAACACCTGTCGCTGGCCGGATGCGCTCACATCCGGC 37 TTerm_0210 NC_003197.2 2234926 2234933 8 2234940 2234947 8 6 100 0 16 25 75 25 75 0 2234936 GCCGGATG CATCCGGC True TGTCGCTGG TTTTCTTCG False True + GCCGGATG CGCTCA CATCCGGC TTTTCTTCG 64 STM2141 intergenic 2234910 2234963 - down AGTTCAACGAAGAAAAGCCGGATGTGAGCGCATCCGGCCAGCGACAGGTGTTA TGGATAGCAAAGTCACCATCGCCTGAGTTCAACGAAGAAAAGCCGGATGTGAGCGCATCCGGCCAGCGACAGGTGTTATTAACGTAGCAACGGGCAGTCCGGC TAACACCTGTCGCTGGCCGGATGCGCTCACATCCGGC 37 TTerm_0211 NC_003197.2 2247771 2247780 10 2247786 2247795 10 5 90 0 15 90 10 100 0 0 2247782 AAATAATCAT ATCATTATTT True ATTGCAACA TGTAAACTT False True + AAATAATCAT TGCTT ATCATTATTT TGTAAACTT 38 STM2153 intergenic 2247637 2247904 - down ATTCTTATTAATTCCGCAGGCCCATATCATTGATATCAATGATATGGGCTTTTTTATTTGTTGTGTTTATATTTAAGGGCAGTAAATTTCGGAAATTAATAAGTTTACAAAATAATGATAAGCAATGATTATTTGTTGCAATTATATTGCAATCTGTAAATTGTTTTAAATCAACAAAACATCGTGTTTACATTGCGATAACTTCCTGTCTATGAGAATTTTCGTTGCAAGGGTTAATAACTCTTAACAAATAGAAATTACTTCATT AGATTGTTGTTAATCATTACGACTAATTCTTATTAATTCCGCAGGCCCATATCATTGATATCAATGATATGGGCTTTTTTATTTGTTGTGTTTATATTTAAGGGCAGTAAATTTCGGAAATTAATAAGTTTACAAAATAATGATAAGCAATGATTATTTGTTGCAATTATATTGCAATCTGTAAATTGTTTTAAATCAACAAAACATCGTGTTTACATTGCGATAACTTCCTGTCTATGAGAATTTTCGTTGCAAGGGTTAATAACTCTTAACAAATAGAAATTACTTCATTAAGGAAGAGATTATGAAACGTTCAC AATGAAGTAATTTCTATTTGTTAAGAGTTATTAACCCTTGCAACGAAAATTCTCATAGACAGGAAGTTATCGCAATGTAAACACGATGTTTTGTTGATTTAAAACAATTTACAGATTGCAATATAATTGCAACAAATAATCATTGCTTATCATTATTT 158 TTerm_0212 NC_003197.2 2252515 2252520 6 2252525 2252530 6 4 100 0 12 16 83 16 83 0 2252522 CGCTGC GCAGCG True GCTCAGGGC TCTTTTCTT False True + CGCTGC TTCG GCAGCG TCTTTTCTT 64 STM2156 intergenic 2252469 2252641 + down CTGGCAGGCATAATGTATTGCATCGACTGGTAAAGTCGCTCAGGGCGCTGCTTCGGCAGCGTCTTTTCTTTATGAATTCCGAAAAAAGACAGCCTCGCTGTAAGTCCCCTCGCCAAAGCCTATAATCCCTGAATTCTTGGCCACACCAATACTTAACGACAAGGAATTGTTA TGCTGGTTTTAAAGAAGCGAAATAACTGGCAGGCATAATGTATTGCATCGACTGGTAAAGTCGCTCAGGGCGCTGCTTCGGCAGCGTCTTTTCTTTATGAATTCCGAAAAAAGACAGCCTCGCTGTAAGTCCCCTCGCCAAAGCCTATAATCCCTGAATTCTTGGCCACACCAATACTTAACGACAAGGAATTGTTATGCAGGTTCTACGTCTTATGGCACT CTGGCAGGCATAATGTATTGCATCGACTGGTAAAGTCGCTCAGGGCGCTGCTTCGGCAGCG 61 TTerm_0213 NC_003197.2 2266591 2266596 6 2266605 2266610 6 8 100 0 12 50 50 50 50 0 2266600 CAGCAA TTGCTG True AGAATCGTC GCTTTTGCG False True + CAGCAA ATGCTGCA TTGCTG GCTTTTGCG 48 STM2169 intergenic 2266483 2266636 - down ATGAGAAAAAGGGCTGGCGCAAAAGCCAGCAATGCAGCATTTGCTGACGATTCTTCTGTAGCGGCAACGCTGGCGTGCCGCTATGATGCCACTGCTAGCTTGAGTATAATCTTAGCTCAGGCGGTGTGCGTTACGACGCGCGTGAATCATTAT GGGGATACGGCTACCGCCTGTTCTGATGAGAAAAAGGGCTGGCGCAAAAGCCAGCAATGCAGCATTTGCTGACGATTCTTCTGTAGCGGCAACGCTGGCGTGCCGCTATGATGCCACTGCTAGCTTGAGTATAATCTTAGCTCAGGCGGTGTGCGTTACGACGCGCGTGAATCATTATCAGAAATCTCATCATGCTGAAATTC ATAATGATTCACGCGCGTCGTAACGCACACCGCCTGAGCTAAGATTATACTCAAGCTAGCAGTGGCATCATAGCGGCACGCCAGCGTTGCCGCTACAGAAGAATCGTCAGCAAATGCTGCATTGCTG 127 TTerm_0214 NC_003197.2 2266607 2266612 6 2266619 2266624 6 6 100 0 12 16 83 16 83 0 2266615 GCTGGC GCCAGC True GCTGCATTG CCTTTTTCT False True + GCTGGC TTTTGC GCCAGC CCTTTTTCT 64 STM2169 intergenic 2266483 2266636 - down ATGAGAAAAAGGGCTGGCGCAAAAGCCAGCAATGCAGCATTTGCTGACGATTCTTCTGTAGCGGCAACGCTGGCGTGCCGCTATGATGCCACTGCTAGCTTGAGTATAATCTTAGCTCAGGCGGTGTGCGTTACGACGCGCGTGAATCATTAT GGGGATACGGCTACCGCCTGTTCTGATGAGAAAAAGGGCTGGCGCAAAAGCCAGCAATGCAGCATTTGCTGACGATTCTTCTGTAGCGGCAACGCTGGCGTGCCGCTATGATGCCACTGCTAGCTTGAGTATAATCTTAGCTCAGGCGGTGTGCGTTACGACGCGCGTGAATCATTATCAGAAATCTCATCATGCTGAAATTC ATAATGATTCACGCGCGTCGTAACGCACACCGCCTGAGCTAAGATTATACTCAAGCTAGCAGTGGCATCATAGCGGCACGCCAGCGTTGCCGCTACAGAAGAATCGTCAGCAAATGCTGCATTGCTGGCTTTTGCGCCAGC 141 TTerm_0215 NC_003197.2 2279033 2279043 11 2279048 2279058 11 4 81 0 12 63 36 66 33 0 2279045 AAAATTTGCGA TCGCGCATTTT True ACCGGGTTA TCATTGAAG True True + AAAATTTGCGA TACG TCGCGCATTTT TCATTGAAG 64 STM2182 intergenic 2279010 2279153 + down CGACGGGACAAAAGACCGGGTTAAAATTTGCGATACGTCGCGCATTTTTCATTGAAGTTTCACAAGTTGCATAAGCAATGAGATTTAGATCACATATTAAGACATAGCAGGCCCGTAAACTACGGTTCCATTACATTGTTATG GCTCATTCTGGCGGTAATGCGCTAACGACGGGACAAAAGACCGGGTTAAAATTTGCGATACGTCGCGCATTTTTCATTGAAGTTTCACAAGTTGCATAAGCAATGAGATTTAGATCACATATTAAGACATAGCAGGCCCGTAAACTACGGTTCCATTACATTGTTATGAGGCAACGCCATGCATCCACGTTTT CGACGGGACAAAAGACCGGGTTAAAATTTGCGATACGTCGCGCATTTT 48 TTerm_0216 NC_003197.2 2330840 2330850 11 2330857 2330867 11 6 90 0 17 50 50 50 50 0 2330853 AAGAACCAGCC GGCTGGTTTTT True ATTCCTCGA TTATGCCTG False True + AAGAACCAGCC TGTTAC GGCTGGTTTTT TTATGCCTG 74 STM2229 intergenic 2330821 2330960 + down GCCGACCAAAATTCCTCGAAGAACCAGCCTGTTACGGCTGGTTTTTTTATGCCTGTTTTCTGAACGGGGAAGCAACGGGGAATAATCGGGGAAAAACCCCGACACAAAACATCGACTTTACCGTAAAGTTTCAACTATT GGGTCGGAGGTTCAAATCCTCTCGTGCCGACCAAAATTCCTCGAAGAACCAGCCTGTTACGGCTGGTTTTTTTATGCCTGTTTTCTGAACGGGGAAGCAACGGGGAATAATCGGGGAAAAACCCCGACACAAAACATCGACTTTACCGTAAAGTTTCAACTATTCACATCACCGGGCAGTCATCAAACT GCCGACCAAAATTCCTCGAAGAACCAGCCTGTTACGGCTGGTTTTT 46 TTerm_0217 NC_003197.2 2330840 2330850 11 2330857 2330867 11 6 90 0 17 50 50 50 50 0 2330853 AAGAACCAGCC GGCTGGTTTTT True ATTCCTCGA TTATGCCTG False True + AAGAACCAGCC TGTTAC GGCTGGTTTTT TTATGCCTG 74 STM2230 intergenic 2330821 2330960 - down AATAGTTGAAACTTTACGGTAAAGTCGATGTTTTGTGTCGGGGTTTTTCCCCGATTATTCCCCGTTGCTTCCCCGTTCAGAAAACAGGCATAAAAAAACCAGCCGTAACAGGCTGGTTCTTCGAGGAATTTTGGTCGGC AGTTTGATGACTGCCCGGTGATGTGAATAGTTGAAACTTTACGGTAAAGTCGATGTTTTGTGTCGGGGTTTTTCCCCGATTATTCCCCGTTGCTTCCCCGTTCAGAAAACAGGCATAAAAAAACCAGCCGTAACAGGCTGGTTCTTCGAGGAATTTTGGTCGGCACGAGAGGATTTGAACCTCCGACCC GCCGACCAAAATTCCTCGAAGAACCAGCCTGTTACGGCTGGTTTTT 46 TTerm_0218 NC_003197.2 2362463 2362470 8 2362480 2362487 8 9 87 0 11 93 6 100 0 0 2362474 AATAATAA TTATTCTT True TGCACAGCA TTTCAGCTG False True + AATAATAA TTCTTATTT TTATTCTT TTTCAGCTG 30 STM2264 intergenic 2362417 2362480 - down AAAATAAGAATTATTATTGCTGTGCAGGTGGAGTTAGTTAAACTGCGGGCTGTTATTATCGGT TCCGTCAGGCAGCTGAAAAAGAATAAAAATAAGAATTATTATTGCTGTGCAGGTGGAGTTAGTTAAACTGCGGGCTGTTATTATCGGTCCGGGTTGTATGCATGGAACTTCTT ACCGATAATAACAGCCCGCAGTTTAACTAACTCCACCTGCACAGCAATAATAATTCTTATTTTTATTCTT 70 TTerm_0219 NC_003197.2 2447094 2447105 12 2447110 2447121 12 4 100 0 24 66 33 66 33 0 2447107 AAAAGAAGGCAT ATGCCTTCTTTT True CGATGAAAA ATATGCGTA True True + AAAAGAAGGCAT TGGT ATGCCTTCTTTT ATATGCGTA 72 STM2336 intergenic 2447072 2447143 - down ATTGACCCCGGATTACGCATATAAAAGAAGGCATACCAATGCCTTCTTTTTTTCATCGCCATAGCGTGATA ATAAAACTTTCCTGGATGATTTGTAATTGACCCCGGATTACGCATATAAAAGAAGGCATACCAATGCCTTCTTTTTTTCATCGCCATAGCGTGATACAGGAGTTCAAAATGGAAATGACCA TATCACGCTATGGCGATGAAAAAAAGAAGGCATTGGTATGCCTTCTTTT 49 TTerm_0220 NC_003197.2 2476480 2476490 11 2476497 2476507 11 6 90 0 17 50 50 50 50 0 2476493 ATGGCGCTGAA TTCAACGCCAT True AAATAAAAA CACACTTTT True True + ATGGCGCTGAA AAAATA TTCAACGCCAT CACACTTTT 50 STM2364 intergenic 2476455 2476689 - down AGGCGCGTTTTGCCTGAGCGCGCAGCGTTAAGGCCTACGGTGTTCATCTGGTAATAGCCGAAGTTCTGTAGGCTGGATAAGGCGTTTACGCCGCCATCCGGCAGAAGGAATGAACCGGGTATCCTGCGCTTATCAGGCCGATGGCAGCTCTTCTGGTCGTGCCCGAAGAGATAAAAAGTGTGATGGCGTTGAATATTTTTTCAGCGCCATTTTTATTTACGCGTGGGAAGGAAA TGGTGATGGGATATAGCCCGAACTAAGGCGCGTTTTGCCTGAGCGCGCAGCGTTAAGGCCTACGGTGTTCATCTGGTAATAGCCGAAGTTCTGTAGGCTGGATAAGGCGTTTACGCCGCCATCCGGCAGAAGGAATGAACCGGGTATCCTGCGCTTATCAGGCCGATGGCAGCTCTTCTGGTCGTGCCCGAAGAGATAAAAAGTGTGATGGCGTTGAATATTTTTTCAGCGCCATTTTTATTTACGCGTGGGAAGGAAATCCCTACGCAAACGTTTTCTTTTTC TTTCCTTCCCACGCGTAAATAAAAATGGCGCTGAAAAAATATTCAACGCCAT 52 TTerm_0221 NC_003197.2 2486862 2486881 20 2486886 2486905 20 4 75 0 15 72 27 73 26 0 2486883 CTGTTAAAGCATTACGTCAT ATTACGTATTTTATTAACAG True ATCAAATAC GAATCATTA False True + CTGTTAAAGCATTACGTCAT TGCT ATTACGTATTTTATTAACAG GAATCATTA 46 STM2374 intergenic 2486745 2486906 + down TAGTTAATGCTGAATAAATTGGCTTTAACCTATCAATCTCAACAATTAATAAATATTTAAACTTATTATATTGAAAATAGTAATAGCACTATCTGTCATGCTTCCCGAATCAAATACTGTTAAAGCATTACGTCATTGCTATTACGTATTTTATTAACAGG AAATGATGCCGATATCGCAGAATAATAGTTAATGCTGAATAAATTGGCTTTAACCTATCAATCTCAACAATTAATAAATATTTAAACTTATTATATTGAAAATAGTAATAGCACTATCTGTCATGCTTCCCGAATCAAATACTGTTAAAGCATTACGTCATTGCTATTACGTATTTTATTAACAGGAATCATTATGAGTTGGGATAAAAGA TAGTTAATGCTGAATAAATTGGCTTTAACCTATCAATCTCAACAATTAATAAATATTTAAACTTATTATATTGAAAATAGTAATAGCACTATCTGTCATGCTTCCCGAATCAAATACTGTTAAAGCATTACGTCATTGCTATTACGTATTTTATTAACAG 160 TTerm_0222 NC_003197.2 2503721 2503732 12 2503738 2503749 12 5 100 0 24 58 41 58 41 0 2503734 AAAAAGGTGAGC GCTCACCTTTTT True AACGGATCA ATTTACTGC True True + AAAAAGGTGAGC ATTGC GCTCACCTTTTT ATTTACTGC 80 STM2391 intergenic 2503701 2503762 + down TCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTTATTTACTGCCGTT TACTAACTTTAACTACGCGTTCTAATCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTTATTTACTGCCGTTTATTCCGAGTCGATCTCTTTGAGTT TCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTT 48 TTerm_0223 NC_003197.2 2503721 2503732 12 2503738 2503749 12 5 100 0 24 58 41 58 41 0 2503734 AAAAAGGTGAGC GCTCACCTTTTT True AACGGATCA ATTTACTGC True True + AAAAAGGTGAGC ATTGC GCTCACCTTTTT ATTTACTGC 80 STM2392 intergenic 2503701 2503762 - down AACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTTTGATCCGTTTCAGAAAGAGA AACTCAAAGAGATCGACTCGGAATAAACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTTTGATCCGTTTCAGAAAGAGATTAGAACGCGTAGTTAAAGTTAGTA TCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTT 48 TTerm_0224 NC_003197.2 2515481 2515488 8 2515493 2515500 8 4 100 0 16 50 50 50 50 0 2515490 AAAAGGCC GGCCTTTT True ACATCTGAA ATTTTGGCA True True + AAAAGGCC GCAA GGCCTTTT ATTTTGGCA 64 STM2401 intergenic 2515480 2516004 + down AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTC GGGGGAAGCGTCACTCTACATCTGAAAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTCTACTCCGTGCTCGCTTCAACGGGTT AAAAGGCCGCAAGGCCTTTT 20 TTerm_0225 NC_003197.2 2515481 2515488 8 2515493 2515500 8 4 100 0 16 50 50 50 50 0 2515490 AAAAGGCC GGCCTTTT True ACATCTGAA ATTTTGGCA True True + AAAAGGCC GCAA GGCCTTTT ATTTTGGCA 64 STM2402 intergenic 2515480 2516004 - down GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTT AACCCGTTGAAGCGAGCACGGAGTAGAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTTTCAGATGTAGAGTGACGCTTCCCCC AAAAGGCCGCAAGGCCTTTT 20 TTerm_0226 NC_003197.2 2515972 2515982 11 2515987 2515997 11 4 100 0 22 45 54 45 54 0 2515984 AAACAGGAGCC GGCTCCTGTTT True GCAAAGAAA GCTTTTCTA True True + AAACAGGAGCC ATGG GGCTCCTGTTT GCTTTTCTA 84 STM2401 intergenic 2515480 2516004 + down AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTC GGGGGAAGCGTCACTCTACATCTGAAAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTCTACTCCGTGCTCGCTTCAACGGGTT AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTT 517 TTerm_0227 NC_003197.2 2515972 2515982 11 2515987 2515997 11 4 100 0 22 45 54 45 54 0 2515984 AAACAGGAGCC GGCTCCTGTTT True GCAAAGAAA GCTTTTCTA True True + AAACAGGAGCC ATGG GGCTCCTGTTT GCTTTTCTA 84 STM2402 intergenic 2515480 2516004 - down GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTT AACCCGTTGAAGCGAGCACGGAGTAGAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTTTCAGATGTAGAGTGACGCTTCCCCC AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTT 517 TTerm_0228 NC_003197.2 2526522 2526531 10 2526536 2526545 10 4 100 0 20 40 60 40 60 0 2526533 AAACCGGGGA TCCCCGGTTT True TAATGCAGA TTTTATGCC False True + AAACCGGGGA GCTA TCCCCGGTTT TTTTATGCC 80 STM2409 intergenic 2526504 2526557 + down GTCTGGGTTTAATGCAGAAACCGGGGAGCTATCCCCGGTTTTTTTATGCCGCT CTCTATCGCGGCGCTGGTACTGTAAGTCTGGGTTTAATGCAGAAACCGGGGAGCTATCCCCGGTTTTTTTATGCCGCTTATTTGCCTAACGGGCGCGGGCGGC GTCTGGGTTTAATGCAGAAACCGGGGAGCTATCCCCGGTTT 41 TTerm_0229 NC_003197.2 2526522 2526531 10 2526536 2526545 10 4 100 0 20 40 60 40 60 0 2526533 AAACCGGGGA TCCCCGGTTT True TAATGCAGA TTTTATGCC False True + AAACCGGGGA GCTA TCCCCGGTTT TTTTATGCC 80 STM2410 intergenic 2526504 2526557 - down AGCGGCATAAAAAAACCGGGGATAGCTCCCCGGTTTCTGCATTAAACCCAGAC GCCGCCCGCGCCCGTTAGGCAAATAAGCGGCATAAAAAAACCGGGGATAGCTCCCCGGTTTCTGCATTAAACCCAGACTTACAGTACCAGCGCCGCGATAGAG GTCTGGGTTTAATGCAGAAACCGGGGAGCTATCCCCGGTTT 41 TTerm_0230 NC_003197.2 2532234 2532244 11 2532250 2532260 11 5 100 0 22 54 45 54 45 0 2532246 AAAAAAGCGCC GGCGCTTTTTT True ACCAATGTA GCTATCTGC True True + AAAAAAGCGCC CTAAA GGCGCTTTTTT GCTATCTGC 84 STM2419 intergenic 2532224 2532393 + down CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATATGGAAGATTCGAACCTGTCGCAGGTTCGGGTCTTGCCTGATGCGCTGCGCTTATCAGGCCTACAGACGACACCGCACACGTAGGCCGGATAAGACGTTAGTCGCCATCCGGCACAGACAT TCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATATGGAAGATTCGAACCTGTCGCAGGTTCGGGTCTTGCCTGATGCGCTGCGCTTATCAGGCCTACAGACGACACCGCACACGTAGGCCGGATAAGACGTTAGTCGCCATCCGGCACAGACATTATACCGTCAACGCCGCCACCAGTT CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTT 36 TTerm_0231 NC_003197.2 2532234 2532244 11 2532250 2532260 11 5 100 0 22 54 45 54 45 0 2532246 AAAAAAGCGCC GGCGCTTTTTT True ACCAATGTA GCTATCTGC True True + AAAAAAGCGCC CTAAA GGCGCTTTTTT GCTATCTGC 84 STM2420 intergenic 2532224 2532393 - down ATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTTTACATTGGTG AACTGGTGGCGGCGTTGACGGTATAATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTTTACATTGGTGGGTCGTGCAGGATTCGAACCTGCGA CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTT 36 TTerm_0232 NC_003197.2 2544224 2544234 11 2544241 2544251 11 6 100 0 22 63 36 63 36 0 2544237 AAAAAAGCACC GGTGCTTTTTT True AAACGCGTA GTGGCCTGC True True + AAAAAAGCACC TTTTTG GGTGCTTTTTT GTGGCCTGC 76 STM2430 intergenic 2544201 2544492 + down TGCCAGCATGTTAAAAACGCGTAAAAAAGCACCTTTTTGGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCACCTCACCTGGCATTGATTCACCCTGCCGGAACTGGTATTTAACCAGACTAATTATTTTGATGCGCGAAATTAATCGTTACAGGAAAAGCGTTAGCTGAATCGATTTTATGATTTGGTTCAAATCTTCCTTTCGCGGCATAATGTTTAATGACGAGCGAAACGTCAGCGGCCATAAGTTGCCAGCAACGGATTGCGTAGAACACCTTTTGTGTCGCGTCCC TACTGAGAAAGAACTGCAACAGTGATGCCAGCATGTTAAAAACGCGTAAAAAAGCACCTTTTTGGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCACCTCACCTGGCATTGATTCACCCTGCCGGAACTGGTATTTAACCAGACTAATTATTTTGATGCGCGAAATTAATCGTTACAGGAAAAGCGTTAGCTGAATCGATTTTATGATTTGGTTCAAATCTTCCTTTCGCGGCATAATGTTTAATGACGAGCGAAACGTCAGCGGCCATAAGTTGCCAGCAACGGATTGCGTAGAACACCTTTTGTGTCGCGTCCCGTTTACGCCGGCGCTAACAATACAG TGCCAGCATGTTAAAAACGCGTAAAAAAGCACCTTTTTGGGTGCTTTTTT 50 TTerm_0233 NC_003197.2 2547183 2547194 12 2547199 2547210 12 4 91 0 19 45 54 45 54 0 2547196 AAGAATGGCGCC GGCGCCATTTTT True CCGCAGTGA TTGCCTGTA False True + AAGAATGGCGCC TTTG GGCGCCATTTTT TTGCCTGTA 86 STM2433 intergenic 2547168 2547317 + down TTCTTGCCGCAGTGAAGAATGGCGCCTTTGGGCGCCATTTTTTTGCCTGTACTTGCGCCGCCATCCGGCGATGGTGCAGTGCACTGCCTGATGGCGCTACGCTTATCAGGCCTACAAGGTTGCGAACATTTCAGCGCCAATCCACGGGT TCCGGTTATCCGCATTAAGAAGTAATTCTTGCCGCAGTGAAGAATGGCGCCTTTGGGCGCCATTTTTTTGCCTGTACTTGCGCCGCCATCCGGCGATGGTGCAGTGCACTGCCTGATGGCGCTACGCTTATCAGGCCTACAAGGTTGCGAACATTTCAGCGCCAATCCACGGGTTACAACTGCGAGGTCACCGGGCGAA TTCTTGCCGCAGTGAAGAATGGCGCCTTTGGGCGCCATTTTT 42 TTerm_0234 NC_003197.2 2547183 2547194 12 2547199 2547210 12 4 91 0 19 45 54 45 54 0 2547196 AAGAATGGCGCC GGCGCCATTTTT True CCGCAGTGA TTGCCTGTA False True + AAGAATGGCGCC TTTG GGCGCCATTTTT TTGCCTGTA 86 STM2434 intergenic 2547168 2547317 - down ACCCGTGGATTGGCGCTGAAATGTTCGCAACCTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCAGTGCACTGCACCATCGCCGGATGGCGGCGCAAGTACAGGCAAAAAAATGGCGCCCAAAGGCGCCATTCTTCACTGCGGCAAGAA TTCGCCCGGTGACCTCGCAGTTGTAACCCGTGGATTGGCGCTGAAATGTTCGCAACCTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCAGTGCACTGCACCATCGCCGGATGGCGGCGCAAGTACAGGCAAAAAAATGGCGCCCAAAGGCGCCATTCTTCACTGCGGCAAGAATTACTTCTTAATGCGGATAACCGGA TTCTTGCCGCAGTGAAGAATGGCGCCTTTGGGCGCCATTTTT 42 TTerm_0235 NC_003197.2 2557506 2557513 8 2557518 2557525 8 4 100 0 16 25 75 25 75 0 2557515 ATCCCCGC GCGGGGAT True GTAAAAAAA GGGCATTTT True True + ATCCCCGC GGAG GCGGGGAT GGGCATTTT 80 STM2446 intergenic 2557404 2557627 - down AGGTAAAACCCTGTCGGATGGCAGCGCAAACGCTTTATTCGACCTACGATTGGTAGGCCTGATAAGCGCAGCGCCATCAGGCAGAACAGCATAAAAATGCCCATCCCCGCCTCCGCGGGGATTTTTTTACCTAATATTTACCTGAATTAGTGAGCTATTCCTCAGCACTTATTTGTTATTACTGTATTTTCAGTGTTAATGGAGTGTAAGACTCCATATTCAA CGCTGGATCGCCTGTTAGCGCTATAAGGTAAAACCCTGTCGGATGGCAGCGCAAACGCTTTATTCGACCTACGATTGGTAGGCCTGATAAGCGCAGCGCCATCAGGCAGAACAGCATAAAAATGCCCATCCCCGCCTCCGCGGGGATTTTTTTACCTAATATTTACCTGAATTAGTGAGCTATTCCTCAGCACTTATTTGTTATTACTGTATTTTCAGTGTTAATGGAGTGTAAGACTCCATATTCAAAAGGAGACATTGAAAATGGGTAAAC TTGAATATGGAGTCTTACACTCCATTAACACTGAAAATACAGTAATAACAAATAAGTGCTGAGGAATAGCTCACTAATTCAGGTAAATATTAGGTAAAAAAATCCCCGCGGAGGCGGGGAT 121 TTerm_0236 NC_003197.2 2596796 2596806 11 2596814 2596824 11 7 100 0 22 54 45 54 45 0 2596809 AAAAGGCGACT AGTCGCCTTTT True GGGCACAAA CTTATCCCC True True + AAAAGGCGACT TTCGTTG AGTCGCCTTTT CTTATCCCC 76 STM2481 intergenic 2596759 2597322 + down GATCCCGGCCAGCCTGATACGAGGTGTCGGGCACAAAAAAGGCGACTTTCGTTGAGTCGCCTTTTCTTATCCCCTATGGGAGCGCGGTGCCTTCCAGGCATTTATTTACGAAGCATGACTTCGATAAAATCTTTCCAGTTCCCCAGTTCACGTTCAATCATAATAGCCTCTCTTATTATTATGGGTATTCTACGTAGTTAGCGGTATAGAGAGAAGTTCATTTAACCGATTGTTGCGATATCCTCTGGTTATGCTGTCTATGATATTACTATGGCGCTGTAGCCATAAATTTTATGTGACTTACTGCAATATTTAGCAACATTAATACCTTTTCTACTACTTTATCAAATTGGGTTAAAAAACAAACAATTGCATATGCACAAAATAGGATTTATACCGCGAAGTATAAACAAGCCACATCTGGAACGTTTTGGAATCATTATTCACATTCACTCAACAATGTTATATTGATTGCCGATCAGCGCTGGATAAATAACCATAAACGGCCACACTTATTATCCCGCAGACGATACTATTGATTATTTATTCGAATTTCGCGTTAA GATCCCGGCCAGCCTGATACGAGGTGTCGGGCACAAAAAAGGCGACTTTCGTTGAGTCGCCTTTT 65 TTerm_0237 NC_003197.2 2597029 2597034 6 2597041 2597046 6 6 100 0 12 50 50 50 50 0 2597037 TATGGC GCCATA True GATATTACT AATTTTATG False True + TATGGC GCTGTA GCCATA AATTTTATG 48 STM2481 intergenic 2596759 2597322 + down GATCCCGGCCAGCCTGATACGAGGTGTCGGGCACAAAAAAGGCGACTTTCGTTGAGTCGCCTTTTCTTATCCCCTATGGGAGCGCGGTGCCTTCCAGGCATTTATTTACGAAGCATGACTTCGATAAAATCTTTCCAGTTCCCCAGTTCACGTTCAATCATAATAGCCTCTCTTATTATTATGGGTATTCTACGTAGTTAGCGGTATAGAGAGAAGTTCATTTAACCGATTGTTGCGATATCCTCTGGTTATGCTGTCTATGATATTACTATGGCGCTGTAGCCATAAATTTTATGTGACTTACTGCAATATTTAGCAACATTAATACCTTTTCTACTACTTTATCAAATTGGGTTAAAAAACAAACAATTGCATATGCACAAAATAGGATTTATACCGCGAAGTATAAACAAGCCACATCTGGAACGTTTTGGAATCATTATTCACATTCACTCAACAATGTTATATTGATTGCCGATCAGCGCTGGATAAATAACCATAAACGGCCACACTTATTATCCCGCAGACGATACTATTGATTATTTATTCGAATTTCGCGTTAA GATCCCGGCCAGCCTGATACGAGGTGTCGGGCACAAAAAAGGCGACTTTCGTTGAGTCGCCTTTTCTTATCCCCTATGGGAGCGCGGTGCCTTCCAGGCATTTATTTACGAAGCATGACTTCGATAAAATCTTTCCAGTTCCCCAGTTCACGTTCAATCATAATAGCCTCTCTTATTATTATGGGTATTCTACGTAGTTAGCGGTATAGAGAGAAGTTCATTTAACCGATTGTTGCGATATCCTCTGGTTATGCTGTCTATGATATTACTATGGCGCTGTAGCCATA 287 TTerm_0238 NC_003197.2 2611991 2612001 11 2612007 2612017 11 5 100 0 22 54 45 54 45 0 2612003 AAAAGCCGACT AGTCGGCTTTT True ATTCAAAAA AATTATTTA True True + AAAAGCCGACT CTTAA AGTCGGCTTTT AATTATTTA 76 STM2498 intergenic 2611956 2612032 - down AGTGAATAAATAATTAAAAGCCGACTTTAAGAGTCGGCTTTTTTTTGAATAAAACCACTCATAACAAACACACTTA GCGATAAGATTTTTGGTACCAAATAAGTGAATAAATAATTAAAAGCCGACTTTAAGAGTCGGCTTTTTTTTGAATAAAACCACTCATAACAAACACACTTAGAGGAAAACACTATGACGCGCCGTG TAAGTGTGTTTGTTATGAGTGGTTTTATTCAAAAAAAAGCCGACTCTTAAAGTCGGCTTTT 61 TTerm_0239 NC_003197.2 2627550 2627563 14 2627569 2627582 14 5 92 0 23 32 67 30 69 0 2627565 CAAAACCGGGCAGG CCCGCCCGGTTTTG True ATTCGCCTC TCTAACTTA True True + CAAAACCGGGCAGG GAACA CCCGCCCGGTTTTG TCTAACTTA 94 STM2512 intergenic 2627427 2627589 + down TCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTGTCTAACT CAAATCCGTCACGCCGGGCACGTAATCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTGTCTAACTTACCAGTTATAGCGCAGATTGAGGC TCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTG 155 TTerm_0240 NC_003197.2 2627550 2627563 14 2627569 2627582 14 5 92 0 23 32 67 30 69 0 2627565 CAAAACCGGGCAGG CCCGCCCGGTTTTG True ATTCGCCTC TCTAACTTA True True + CAAAACCGGGCAGG GAACA CCCGCCCGGTTTTG TCTAACTTA 94 STM2513 intergenic 2627427 2627589 - down AGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTTGAGGCGAATGACAAACCGGTTGATCGTCAGATTATGGCTACACCTTATCCGACGTGGCGCGTAGGTTGGCTGAGGCGAAGTCGAAACCCAACATCGCGCTGCAAAGGGTGGGGGAGTGTTGGA GCCTCAATCTGCGCTATAACTGGTAAGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTTGAGGCGAATGACAAACCGGTTGATCGTCAGATTATGGCTACACCTTATCCGACGTGGCGCGTAGGTTGGCTGAGGCGAAGTCGAAACCCAACATCGCGCTGCAAAGGGTGGGGGAGTGTTGGATTACGTGCCCGGCGTGACGGATTTG TCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTG 155 TTerm_0241 NC_003197.2 2652997 2653008 12 2653014 2653025 12 5 91 0 19 45 54 45 54 0 2653010 AAAACGGCCCCT AGGAGCCGTTTT True AAAACAGGA TTAAAACAC True True + AAAACGGCCCCT ACACC AGGAGCCGTTTT TTAAAACAC 70 STM2520 intergenic 2652941 2653048 - down ATCGTCACGGTTGTGTGTTTTAAAAAACGGCTCCTGGTGTAGGGGCCGTTTTCCTGTTTTTAACAACGGCGTAAAAATGACGCGCGTTGTCTGATGATTTTTTAAAT GTACGGTCTACGCGATTACGCGTTAATCGTCACGGTTGTGTGTTTTAAAAAACGGCTCCTGGTGTAGGGGCCGTTTTCCTGTTTTTAACAACGGCGTAAAAATGACGCGCGTTGTCTGATGATTTTTTAAATGAGGCTTTAAACATGGTACCTGTGG ATTTAAAAAATCATCAGACAACGCGCGTCATTTTTACGCCGTTGTTAAAAACAGGAAAACGGCCCCTACACCAGGAGCCGTTTT 84 TTerm_0242 NC_003197.2 2675204 2675210 7 2675215 2675221 7 4 100 0 14 0 100 0 100 0 2675212 GCCGCCC GGGCGGC True GCCAGGAGG TTTCTTTTC False True + GCCGCCC TGTT GGGCGGC TTTCTTTTC 76 STM2534 intergenic 2674663 2675232 + down TCGACATGATGTCGGGTGGCGCTCACGCTTATCCGGCCTACCGTTCAGGCTGATTTAAAGCGAATCTACATAAATTCTGTTTAAGCAGGCCACAAAAAAACCGCTCAATTGAGCGGTTTTTTTGTGCTGGTCCGGTTCGCGGCCTTTCCAGCAGGCTTTGTTGCCATAGCAACGCAGGCACACCGTAGGGGATTAATACTCCCTTTTAAGGGAGCAAATGTCAATATGATTTACCGGGAAACTATTCAATATTTGAGGTATTATCTTTCCCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTCAGGAGAGGATAACCCATGGCCGTAAGCGCAGGCACACCGTAGTGCCTGCTATCACGGCATTATCGCCAGCGGTGCTGCCGTGATGCGGTCTTCGCAAGGACCGCAACATGAAGGTACGATGCTTTTGTGTCGTGCTTCTTGTTTCTGGCACGTTGTGTCTTCACGCAGACAGAAGCTACCCAGGTAATTCTGTTCCCGTAACGCTCAACGTCCAGAGCAGGTAAGCCAGGAGGCCGCCCTGTTGGGCGGCTTTCTTTTCTT TCGACATGATGTCGGGTGGCGCTCACGCTTATCCGGCCTACCGTTCAGGCTGATTTAAAGCGAATCTACATAAATTCTGTTTAAGCAGGCCACAAAAAAACCGCTCAATTGAGCGGTTTTTTTGTGCTGGTCCGGTTCGCGGCCTTTCCAGCAGGCTTTGTTGCCATAGCAACGCAGGCACACCGTAGGGGATTAATACTCCCTTTTAAGGGAGCAAATGTCAATATGATTTACCGGGAAACTATTCAATATTTGAGGTATTATCTTTCCCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTCAGGAGAGGATAACCCATGGCCGTAAGCGCAGGCACACCGTAGTGCCTGCTATCACGGCATTATCGCCAGCGGTGCTGCCGTGATGCGGTCTTCGCAAGGACCGCAACATGAAGGTACGATGCTTTTGTGTCGTGCTTCTTGTTTCTGGCACGTTGTGTCTTCACGCAGACAGAAGCTACCCAGGTAATTCTGTTCCCGTAACGCTCAACGTCCAGAGCAGGTAAGCCAGGAGGCCGCCCTGTTGGGCGGC 558 TTerm_0243 NC_003197.2 2675204 2675210 7 2675215 2675221 7 4 100 0 14 0 100 0 100 0 2675212 GCCGCCC GGGCGGC True GCCAGGAGG TTTCTTTTC False True + GCCGCCC TGTT GGGCGGC TTTCTTTTC 76 STM2535 intergenic 2674663 2675232 - down AAGAAAAGAAAGCCGCCCAACAGGGCGGCCTCCTGGCTTACCTGCTCTGGACGTTGAGCGTTACGGGAACAGAATTACCTGGGTAGCTTCTGTCTGCGTGAAGACACAACGTGCCAGAAACAAGAAGCACGACACAAAAGCATCGTACCTTCATGTTGCGGTCCTTGCGAAGACCGCATCACGGCAGCACCGCTGGCGATAATGCCGTGATAGCAGGCACTACGGTGTGCCTGCGCTTACGGCCATGGGTTATCCTCTCCTGAAGCCAGCGCCCGTTTGCGAGACGGCGGAAAGGGCCGGGAAAGATAATACCTCAAATATTGAATAGTTTCCCGGTAAATCATATTGACATTTGCTCCCTTAAAAGGGAGTATTAATCCCCTACGGTGTGCCTGCGTTGCTATGGCAACAAAGCCTGCTGGAAAGGCCGCGAACCGGACCAGCACAAAAAAACCGCTCAATTGAGCGGTTTTTTTGTGGCCTGCTTAAACAGAATTTATGTAGATTCGCTTTAAATCAGCCTGAACGGTAGGCCGGATAAGCGTGAGCGCCACCCGACATCATGTCGA TCGACATGATGTCGGGTGGCGCTCACGCTTATCCGGCCTACCGTTCAGGCTGATTTAAAGCGAATCTACATAAATTCTGTTTAAGCAGGCCACAAAAAAACCGCTCAATTGAGCGGTTTTTTTGTGCTGGTCCGGTTCGCGGCCTTTCCAGCAGGCTTTGTTGCCATAGCAACGCAGGCACACCGTAGGGGATTAATACTCCCTTTTAAGGGAGCAAATGTCAATATGATTTACCGGGAAACTATTCAATATTTGAGGTATTATCTTTCCCGGCCCTTTCCGCCGTCTCGCAAACGGGCGCTGGCTTCAGGAGAGGATAACCCATGGCCGTAAGCGCAGGCACACCGTAGTGCCTGCTATCACGGCATTATCGCCAGCGGTGCTGCCGTGATGCGGTCTTCGCAAGGACCGCAACATGAAGGTACGATGCTTTTGTGTCGTGCTTCTTGTTTCTGGCACGTTGTGTCTTCACGCAGACAGAAGCTACCCAGGTAATTCTGTTCCCGTAACGCTCAACGTCCAGAGCAGGTAAGCCAGGAGGCCGCCCTGTTGGGCGGC 558 TTerm_0244 NC_003197.2 2677422 2677432 11 2677437 2677447 11 4 90 0 17 22 77 20 80 0 2677434 AACGGGCCGCC GGCAGCCCGTT True TATTAGCAA AGATCTTTT False True + AACGGGCCGCC GTAG GGCAGCCCGTT AGATCTTTT 74 STM2537 intergenic 2677414 2677648 - down ATTTTTGCGTCATGATCCTCGCCGCAGGTGCGTTGGCTACGTTCGCTCACCCCAGTCACATAGTTTGCTATGCTCCCGGGGATGATGAGGGACATCCTTGTCCCTCACCAGAGGCAGCCTTTGGCTGTGCAAATTCGTTCCCGACGAATTTGTCGCTCACTTGCCGCCTTCCTGCAACGCGAATCATTTAGCAAAAGATCTAACGGGCTGCCCTACGGCGGCCCGTTTGCTAAT TAGTCTGGTTGGATGAAGCAGAGTAATTTTTGCGTCATGATCCTCGCCGCAGGTGCGTTGGCTACGTTCGCTCACCCCAGTCACATAGTTTGCTATGCTCCCGGGGATGATGAGGGACATCCTTGTCCCTCACCAGAGGCAGCCTTTGGCTGTGCAAATTCGTTCCCGACGAATTTGTCGCTCACTTGCCGCCTTCCTGCAACGCGAATCATTTAGCAAAAGATCTAACGGGCTGCCCTACGGCGGCCCGTTTGCTAATAAGGAAAATAACAATGACAGAAGCC ATTAGCAAACGGGCCGCCGTAGGGCAGCCCGTT 33 TTerm_0245 NC_003197.2 2685247 2685255 9 2685264 2685272 9 8 100 0 18 22 77 22 77 0 2685259 CGGCGGATG CATCCGCCG True AGTCTCTTC TGCCTTTTC False True + CGGCGGATG GGGCCACT CATCCGCCG TGCCTTTTC 68 STM2546 intergenic 2685239 2685372 + down GTCTCTTCGGCGGATGGGGCCACTCATCCGCCGTGCCTTTTCAGGCGTTTTTCCTAAACACAGCCTCATCGCTTTACTTGCCTGCATGTTTTTGTACGATCGCTCCCTGCTCCGCTATTGGCATAAAGCGGCA ACTGAGCGATGCGCTGAAGCGCTAAGTCTCTTCGGCGGATGGGGCCACTCATCCGCCGTGCCTTTTCAGGCGTTTTTCCTAAACACAGCCTCATCGCTTTACTTGCCTGCATGTTTTTGTACGATCGCTCCCTGCTCCGCTATTGGCATAAAGCGGCAAGGAAGCGAACATGACCCTTCAACA GTCTCTTCGGCGGATGGGGCCACTCATCCGCCG 33 TTerm_0246 NC_003197.2 2698321 2698330 10 2698335 2698344 10 4 90 0 15 80 20 88 11 0 2698332 ATTAAACGAT ATCCTTTAAT True TCTTTGTAA GATATTTTC False True + ATTAAACGAT GTTT ATCCTTTAAT GATATTTTC 46 STM2557 intergenic 2698176 2698371 + down ATTTAACGCTGAACCATGACAAATAAAAGCGAAAAGATATTAAATTTTTCGCTTTTATTTTGTGAAAAACATGTTGCCAAAAATAGCTTATGTTAATTTTGGCAACATATTCATTGCAAAGATATGTAAATATAACTCTTTGTAATTAAACGATGTTTATCCTTTAATGATATTTTCCATGATATTTATATGTTA GAATAGTTTTCTGGCAGAAGATTAAATTTAACGCTGAACCATGACAAATAAAAGCGAAAAGATATTAAATTTTTCGCTTTTATTTTGTGAAAAACATGTTGCCAAAAATAGCTTATGTTAATTTTGGCAACATATTCATTGCAAAGATATGTAAATATAACTCTTTGTAATTAAACGATGTTTATCCTTTAATGATATTTTCCATGATATTTATATGTTAATTCAAAAAAATCAATCTATCAGTT ATTTAACGCTGAACCATGACAAATAAAAGCGAAAAGATATTAAATTTTTCGCTTTTATTTTGTGAAAAACATGTTGCCAAAAATAGCTTATGTTAATTTTGGCAACATATTCATTGCAAAGATATGTAAATATAACTCTTTGTAATTAAACGATGTTTATCCTTTAAT 168 TTerm_0247 NC_003197.2 2765841 2765846 6 2765852 2765857 6 5 100 0 12 83 16 83 16 0 2765848 TATTCA TGAATA True AGAAAGAAT GCACTTTTT False True + TATTCA AGGGG TGAATA GCACTTTTT 32 STM2622 intergenic 2765791 2766077 - down GATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAG AAATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTA CTCTACATTCAACCACTGTATATAAACACAGTATACCTGTTAGAAAGAATATTCAAGGGGTGAATA 66 TTerm_0248 NC_003197.2 2768876 2768890 15 2768895 2768908 14 4 86 6 13 41 58 38 61 0 2768892 GAAAGCCGTTGGTGA TCACCGCGGCTTTC True TTGCACCAG GCCTTTTTA False True + GAAAGCCGTTGGTGA CCCC TCACCGCGGCTTTC GCCTTTTTA 58 STM2627 intergenic 2768852 2768931 - down AAAATGGCAGCAACTAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAAAACGGTAGGTAATT GGCCGGATGCGCTGGGGTGGGACTGAAAATGGCAGCAACTAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAAAACGGTAGGTAATTGCGGAGATGAGTATGTCAAATACCG AATTACCTACCGTTTTTGCACCAGAAAGCCGTTGGTGACCCCTCACCGCGGCTTTC 56 TTerm_0249 NC_003197.2 2770057 2770072 16 2770077 2770092 16 4 81 0 17 59 40 61 38 0 2770074 CATACAGGTAGCACCT AGGTGCTATTTTTATG True AACTCATCC CTCCAAGAT False True + CATACAGGTAGCACCT CTTT AGGTGCTATTTTTATG CTCCAAGAT 66 STM2628 intergenic 2770040 2770084 + down AACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCTA TCTAATTAACGACCTCAAAAAATAGAACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCTATTTTTATGCTCCAAGATAGAACTTT AACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCTATTTTTATG 52 TTerm_0250 NC_003197.2 2784245 2784255 11 2784260 2784270 11 4 100 0 22 45 54 45 54 0 2784257 AATGCCGGGTT AACCCGGCATT True GTGATGATA TTTTTATCT False True + AATGCCGGGTT CGTT AACCCGGCATT TTTTTATCT 76 STM2643 intergenic 2784240 2784258 + down TGATAATGCCGGGTTCGT GCAGGAGCAATCCAGCGAAGAGTGATGATAATGCCGGGTTCGTTAACCCGGCATTTTTTTATCTTCCA TGATAATGCCGGGTTCGTTAACCCGGCATT 30 TTerm_0251 NC_003197.2 2784245 2784255 11 2784260 2784270 11 4 100 0 22 45 54 45 54 0 2784257 AATGCCGGGTT AACCCGGCATT True GTGATGATA TTTTTATCT False True + AATGCCGGGTT CGTT AACCCGGCATT TTTTTATCT 76 STM2644 intergenic 2784240 2784258 - down ACGAACCCGGCATTATCA TGGAAGATAAAAAAATGCCGGGTTAACGAACCCGGCATTATCATCACTCTTCGCTGGATTGCTCCTGC TGATAATGCCGGGTTCGTTAACCCGGCATT 30 TTerm_0252 NC_003197.2 2794017 2794025 9 2794031 2794039 9 5 88 0 13 38 61 37 62 0 2794027 AAGCCCCGT ACGGGGTTT True TGTAATCGA TCTCTTAGG False True + AAGCCCCGT CCTGT ACGGGGTTT TCTCTTAGG 66 STM2652 intergenic 2794013 2794045 + down TCGAAGCCCCGTCCTGTACGGGGTTTTCTCTT CAGATTAATTAGCCGTATCCTGTAATCGAAGCCCCGTCCTGTACGGGGTTTTCTCTTAGGAGTGAACTGGTGCGCGTGTTGA TCGAAGCCCCGTCCTGTACGGGGTTT 26 TTerm_0253 NC_003197.2 2796400 2796417 18 2796422 2796439 18 4 88 0 26 50 50 50 50 0 2796419 AAAACAAAAGGCCCTGTC GACAGGGCCCTTCGTTTT True AACAGACAA ATTTGATGC True True + AAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTT ATTTGATGC 84 STM2656 intergenic 2796245 2796443 - down AAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGAATTATCCCGCCTACGAAGTTGGTGCTCTTGTAGAACTGATAAGAGCACAACCCACCCAATCATTAACGATGAACTATCCTTTACACGTGCTTATATAAGCAGTGAGG CGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGAATTATCCCGCCTACGAAGTTGGTGCTCTTGTAGAACTGATAAGAGCACAACCCACCCAATCATTAACGATGAACTATCCTTTACACGTGCTTATATAAGCAGTGAGGATTTTCATTGGCTATCAAACCTTTT CCTCACTGCTTATATAAGCACGTGTAAAGGATAGTTCATCGTTAATGATTGGGTGGGTTGTGCTCTTATCAGTTCTACAAGAGCACCAACTTCGTAGGCGGGATAATTCCTGTAGGCCGGATAAGGCGGAGCCGCCATCCGGCAGAAACAGACAAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTT 194 TTerm_0254 NC_003197.2 2799888 2799905 18 2799910 2799927 18 4 88 0 26 69 30 75 25 0 2799907 AATATCTCAAACGTGACT AGTCAGTTTTGAGATATT True AAAGAGCAA AGGGCAGGT False True + AATATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATATT AGGGCAGGT 76 STM2658 intergenic 2799767 2799961 - down ACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCCTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAGCACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGA GGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCCTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAGCACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGT TCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGCTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACGTGACTCGTAAGTCAGTTTTGAGATATT 160 TTerm_0255 NC_003197.2 2802078 2802088 11 2802093 2802103 11 4 90 0 17 40 59 40 60 0 2802090 AAAACGAGCCC GGGCCCGTTTT True TTTAAACAA ATTCAAATT True True + AAAACGAGCCC GTCA GGGCCCGTTTT ATTCAAATT 82 STM2660 intergenic 2801663 2802119 - down AGTCACAAATTTGAATAAAACGGGCCCTGACGGGCTCGTTTTTGTTTAAAAACCAGGCGAAAATAGGCTTTTGGTTCAAATGTTGTTTGAAAAGTGAACGGTTGAGCTTTTTTTTGCATTTAGGTCTTGTCAGGCTCTAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCATACAGGCCGCCGGGTCAGAAAAGCTTCGTTAAGAAGTCTGTGAGGAAAGCGAAAATAAAGGCTTGACTCAAAAAGAGGAAAGCGTAATATACGCCACCTCGCGACGGTGAGCTGCAAGCCGCGTCGCACCTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAATCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTT ATGATCGTATTGTGGCAGTGCAGTAAGTCACAAATTTGAATAAAACGGGCCCTGACGGGCTCGTTTTTGTTTAAAAACCAGGCGAAAATAGGCTTTTGGTTCAAATGTTGTTTGAAAAGTGAACGGTTGAGCTTTTTTTTGCATTTAGGTCTTGTCAGGCTCTAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCATACAGGCCGCCGGGTCAGAAAAGCTTCGTTAAGAAGTCTGTGAGGAAAGCGAAAATAAAGGCTTGACTCAAAAAGAGGAAAGCGTAATATACGCCACCTCGCGACGGTGAGCTGCAAGCCGCGTCGCACCTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAATCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTC AAAAGTTTGATGCTCAAAGAATTAAACTTCGTAATGAATTACGTGTTCACTCTTGAGATTTGGTATTCATTTTTCGTCCGAGGACGTTAAGAATCCGTATCTTCGAGTGCCCACACAGATTGTCTGATAAATTGTTAAAGAGCAGGTGCGACGCGGCTTGCAGCTCACCGTCGCGAGGTGGCGTATATTACGCTTTCCTCTTTTTGAGTCAAGCCTTTATTTTCGCTTTCCTCACAGACTTCTTAACGAAGCTTTTCTGACCCGGCGGCCTGTATGCCGTTGTTCCGTGTCAGTGGTGGCGCATTATAGGGAGTTATTAGAGCCTGACAAGACCTAAATGCAAAAAAAAGCTCAACCGTTCACTTTTCAAACAACATTTGAACCAAAAGCCTATTTTCGCCTGGTTTTTAAACAAAAACGAGCCCGTCAGGGCCCGTTTT 440 TTerm_0256 NC_003197.2 2807416 2807427 12 2807432 2807443 12 4 100 0 24 41 58 41 58 0 2807429 AAAACGGCAGCC GGCTGCCGTTTT True AAACAAGCA TTTATTCGG True True + AAAACGGCAGCC TTCC GGCTGCCGTTTT TTTATTCGG 88 STM2663 intergenic 2807399 2807435 + down AGCAATACAAACAAGCAAAACGGCAGCCTTCCGGCT TGCCGCTAACAGCAAAAACACCTGAAGCAATACAAACAAGCAAAACGGCAGCCTTCCGGCTGCCGTTTTTTTATTCGGTATCTGAT AGCAATACAAACAAGCAAAACGGCAGCCTTCCGGCTGCCGTTTT 44 TTerm_0257 NC_003197.2 2808033 2808040 8 2808045 2808052 8 4 100 0 16 25 75 25 75 0 2808042 AACGCGCC GGCGCGTT True GTATCGCCA TTTTGTTGA False True + AACGCGCC TTCG GGCGCGTT TTTTGTTGA 80 STM2665 intergenic 2808009 2808106 + down TCCCTTACATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGGATTAAAACAGTACGGGTACTGTACTTACGTACACAAAGGAA CTTCGTCGAAGCAGAAGAAGAGTAGTCCCTTACATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTTTTTTGTTGACAGGATTAAAACAGTACGGGTACTGTACTTACGTACACAAAGGAAACAGTTATGAAGCTCACCCGGTTTT TCCCTTACATTGAGTGTATCGCCAACGCGCCTTCGGGCGCGTT 43 TTerm_0258 NC_003197.2 2808204 2808216 13 2808222 2808234 13 5 92 0 21 42 57 41 58 0 2808218 AAGAAGGCCTCCC GGGAGGCCTTTTT True AGACGAACA TATTGATAA False True + AAGAAGGCCTCCC CCACC GGGAGGCCTTTTT TATTGATAA 82 STM2666 intergenic 2808160 2808249 + down CCGGGAGGCGTTTCGTCATGTGATAAAGAATGCGAAGACGAACAAGAAGGCCTCCCCCACCGGGAGGCCTTTTTTATTGATAACAAAAA CGCATTCTTTTTTATCTTCCCCTGACCGGGAGGCGTTTCGTCATGTGATAAAGAATGCGAAGACGAACAAGAAGGCCTCCCCCACCGGGAGGCCTTTTTTATTGATAACAAAAAAGGCAACACTATGACATCGGAAAAC CCGGGAGGCGTTTCGTCATGTGATAAAGAATGCGAAGACGAACAAGAAGGCCTCCCCCACCGGGAGGCCTTTTT 74 TTerm_0259 NC_003197.2 2820833 2820842 10 2820847 2820856 10 4 90 0 15 50 50 44 55 0 2820844 AATGGCGAAC GTTCGCCTTT True AGTAACACA TTTATCGCC False True + AATGGCGAAC TCCG GTTCGCCTTT TTTATCGCC 62 STM2679 intergenic 2820829 2820944 + down CACAATGGCGAACTCCGGTTCGCCTTTTTTATCGCCGTCTTTTAAGATTCCATCAATTCCTGCCATTTACTTAACAATGCAATAATGTCTTTTCAGGCATTCAGAAAGGATATTG GCTGCGCGAGAGTGTGGCGGAGTAACACAATGGCGAACTCCGGTTCGCCTTTTTTATCGCCGTCTTTTAAGATTCCATCAATTCCTGCCATTTACTTAACAATGCAATAATGTCTTTTCAGGCATTCAGAAAGGATATTGATGTTATGTCAGAAGATTATGTAAT CACAATGGCGAACTCCGGTTCGCCTTT 27 TTerm_0260 NC_003197.2 2821560 2821567 8 2821575 2821582 8 7 100 0 16 37 62 37 62 0 2821570 ATGGCCGA TCGGCCAT True CTAAAAAAA CAAACTTTT True True + ATGGCCGA CTTTACA TCGGCCAT CAAACTTTT 72 STM2680 intergenic 2821555 2821590 + down AAAAATGGCCGACTTTACATCGGCCATCAAACTTT GGAAGTGCAGGATTTTTTAAGCTAAAAAAATGGCCGACTTTACATCGGCCATCAAACTTTTACTTCGCCTTCGCTACAGTCACCA AAAAATGGCCGACTTTACATCGGCCAT 27 TTerm_0261 NC_003197.2 2821560 2821567 8 2821575 2821582 8 7 100 0 16 37 62 37 62 0 2821570 ATGGCCGA TCGGCCAT True CTAAAAAAA CAAACTTTT True True + ATGGCCGA CTTTACA TCGGCCAT CAAACTTTT 72 STM2681 intergenic 2821555 2821590 - down AAAGTTTGATGGCCGATGTAAAGTCGGCCATTTTT TGGTGACTGTAGCGAAGGCGAAGTAAAAGTTTGATGGCCGATGTAAAGTCGGCCATTTTTTTAGCTTAAAAAATCCTGCACTTCC AAAAATGGCCGACTTTACATCGGCCAT 27 TTerm_0262 NC_003197.2 2844319 2844333 15 2844338 2844352 15 4 86 0 20 53 46 53 46 0 2844335 AACAAGGGGTTACGT ACGTAGCCCCTTTTT True CCAAATAAA CTTTGGTAG True True + AACAAGGGGTTACGT GAAA ACGTAGCCCCTTTTT CTTTGGTAG 64 STM2693 intergenic 2844316 2844431 + down AAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTT TCAACTCCCGCCAGCTCCACCAAATAAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTTCAGAAACTCATGTGGCCTTGACCAC AAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTT 36 TTerm_0263 NC_003197.2 2844319 2844333 15 2844338 2844352 15 4 86 0 20 53 46 53 46 0 2844335 AACAAGGGGTTACGT ACGTAGCCCCTTTTT True CCAAATAAA CTTTGGTAG True True + AACAAGGGGTTACGT GAAA ACGTAGCCCCTTTTT CTTTGGTAG 64 STM2694 intergenic 2844316 2844431 - down AACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTT GTGGTCAAGGCCACATGAGTTTCTGAACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTTATTTGGTGGAGCTGGCGGGAGTTGA AAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTT 36 TTerm_0264 NC_003197.2 2878037 2878052 16 2878059 2878074 16 6 93 0 27 65 34 66 33 0 2878055 AAAAAAGCCTGTAACT AGTTGCAGGCTTTTTT True TGAACCTTA GTTGCATGT True True + AAAAAAGCCTGTAACT TCAATG AGTTGCAGGCTTTTTT GTTGCATGT 78 STM2739 intergenic 2877844 2878160 + down TTTATGGCGGCATTTTGGCGGCAGGGCACTAAAAACGCGTAAAACGGACGAACACTGAATAATATTAACCCGCTGTTTTTAAACGCAATACACTGTTTTTACTATACTAAAAATGGTATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAACATTCATTCATGATGCATCATGAACCTTAAAAAAGCCTGTAACTTCAATGAGTTGCAGGCTTTTTTGTTGCATGTGTGGTCATGATCTCTGTATGAATCTTGAGCTTTTGGCACCATGTTTAGCACCACGGTATCGTGGGGCTAAAAAAGCG TCACAACCTCAATTGGAAACGCTAATTTATGGCGGCATTTTGGCGGCAGGGCACTAAAAACGCGTAAAACGGACGAACACTGAATAATATTAACCCGCTGTTTTTAAACGCAATACACTGTTTTTACTATACTAAAAATGGTATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAACATTCATTCATGATGCATCATGAACCTTAAAAAAGCCTGTAACTTCAATGAGTTGCAGGCTTTTTTGTTGCATGTGTGGTCATGATCTCTGTATGAATCTTGAGCTTTTGGCACCATGTTTAGCACCACGGTATCGTGGGGCTAAAAAAGCGTGGTGCTAAAACATGCCTAACCAAC TTTATGGCGGCATTTTGGCGGCAGGGCACTAAAAACGCGTAAAACGGACGAACACTGAATAATATTAACCCGCTGTTTTTAAACGCAATACACTGTTTTTACTATACTAAAAATGGTATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAACATTCATTCATGATGCATCATGAACCTTAAAAAAGCCTGTAACTTCAATGAGTTGCAGGCTTTTTT 230 TTerm_0265 NC_003197.2 2888250 2888263 14 2888270 2888283 14 6 92 0 23 67 32 69 30 0 2888266 AAATACACCGTTTC GAAATGGTGTATTT True AAATAGCGA TTCAGAAAA False True + AAATACACCGTTTC AATACC GAAATGGTGTATTT TTCAGAAAA 62 STM2747 intergenic 2888223 2888377 + down TAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTTTTCAGAAAAAAAACCACCTTCATTAAAATTAAATATAACCCATTGTTTTATTAAATAAAAACACGAGTGGATGAACAATCAATGCAAATAACCT CTTAATAGATAGCCATAATATTTAATAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTTTTCAGAAAAAAAACCACCTTCATTAAAATTAAATATAACCCATTGTTTTATTAAATAAAAACACGAGTGGATGAACAATCAATGCAAATAACCTCATATATTACCAGACAATATCAATG TAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTT 60 TTerm_0266 NC_003197.2 2888250 2888263 14 2888270 2888283 14 6 92 0 23 67 32 69 30 0 2888266 AAATACACCGTTTC GAAATGGTGTATTT True AAATAGCGA TTCAGAAAA False True + AAATACACCGTTTC AATACC GAAATGGTGTATTT TTCAGAAAA 62 STM2748 intergenic 2888223 2888377 - down AGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAATTTTAATGAAGGTGGTTTTTTTTCTGAAAAATACACCATTTCGGTATTGAAACGGTGTATTTCGCTATTTTTTTTTGAATGTAATTTA CATTGATATTGTCTGGTAATATATGAGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAATTTTAATGAAGGTGGTTTTTTTTCTGAAAAATACACCATTTCGGTATTGAAACGGTGTATTTCGCTATTTTTTTTTGAATGTAATTTATTAAATATTATGGCTATCTATTAAG TAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTT 60 TTerm_0267 NC_003197.2 2955712 2955724 13 2955730 2955742 13 5 84 0 16 61 38 63 36 0 2955726 ATTCACCTGGATT AATTCAGGTGGAT True GTGACATTA TTTTGCTGG False True + ATTCACCTGGATT CCCCC AATTCAGGTGGAT TTTTGCTGG 40 STM2808 intergenic 2955600 2955884 + down CCTTACGGGCATGGGAAATAACGTTACATTTCCCATGCCTTTATTTCAAGCAATAGGGAGTCAAATCGCGCAAATATTACAACATGTCCTACACTCAATACGAGTGACATTATTCACCTGGATTCCCCCAATTCAGGTGGATTTTTGCTGGTTGTTCCAAAAAATATCTCTTCCTCCCCATTCGCGTTCAGCCCTTATATCATGGGAAATCACAGCCGATAGCACCTCGCAATATTCATGCCAGAAGCAAATTCAGGGTTGTCTCAGATTCTGAGTATGTTAGG CGAAGACGAAGACTGGAATTTTTAACCTTACGGGCATGGGAAATAACGTTACATTTCCCATGCCTTTATTTCAAGCAATAGGGAGTCAAATCGCGCAAATATTACAACATGTCCTACACTCAATACGAGTGACATTATTCACCTGGATTCCCCCAATTCAGGTGGATTTTTGCTGGTTGTTCCAAAAAATATCTCTTCCTCCCCATTCGCGTTCAGCCCTTATATCATGGGAAATCACAGCCGATAGCACCTCGCAATATTCATGCCAGAAGCAAATTCAGGGTTGTCTCAGATTCTGAGTATGTTAGGGTAGAAAAAGGTAACTATTTCTATC CCTTACGGGCATGGGAAATAACGTTACATTTCCCATGCCTTTATTTCAAGCAATAGGGAGTCAAATCGCGCAAATATTACAACATGTCCTACACTCAATACGAGTGACATTATTCACCTGGATTCCCCCAATTCAGGTGGAT 142 TTerm_0268 NC_003197.2 2964519 2964528 10 2964533 2964542 10 4 100 0 20 60 40 60 40 0 2964530 AAAAGGGATC GATCCCTTTT True TATCTGATA TTAGTAGAC True True + AAAAGGGATC TGCG GATCCCTTTT TTAGTAGAC 72 STM2815 intergenic 2964509 2964558 + down CTATCTGATAAAAGGGATCTGCGGATCCCTTTTTTAGTAGACCAACAAT CGGCGGCGGTGGCGGCGCGCACTAACTATCTGATAAAAGGGATCTGCGGATCCCTTTTTTAGTAGACCAACAATCAGAAGAAATATTTGAATCTCAGAC CTATCTGATAAAAGGGATCTGCGGATCCCTTTT 33 TTerm_0269 NC_003197.2 2964519 2964528 10 2964533 2964542 10 4 100 0 20 60 40 60 40 0 2964530 AAAAGGGATC GATCCCTTTT True TATCTGATA TTAGTAGAC True True + AAAAGGGATC TGCG GATCCCTTTT TTAGTAGAC 72 STM2816 intergenic 2964509 2964558 - down ATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAG GTCTGAGATTCAAATATTTCTTCTGATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAGTTAGTGCGCGCCGCCACCGCCGCCG CTATCTGATAAAAGGGATCTGCGGATCCCTTTT 33 TTerm_0270 NC_003197.2 2966879 2966887 9 2966892 2966900 9 4 88 0 13 44 55 50 50 0 2966889 TCATCCCTG CAGCGATGA True TGTTATCAT AATTTTGGC False True + TCATCCCTG TTTT CAGCGATGA AATTTTGGC 58 STM2818 intergenic 2966800 2966939 - down ACCCAAAAGAAAAAGGCCACTCACGGAGTGGCCAAAATTTCATCGCTGAAAACAGGGATGATGATAACAAATGCGCGTCTTTCATATACTCAGACTCGCCCCGGAACAAAGAGTTCAGTTTATTTTTAAAAAATTATCG CCGCGTGGCTTGCAAAACACGCCTGACCCAAAAGAAAAAGGCCACTCACGGAGTGGCCAAAATTTCATCGCTGAAAACAGGGATGATGATAACAAATGCGCGTCTTTCATATACTCAGACTCGCCCCGGAACAAAGAGTTCAGTTTATTTTTAAAAAATTATCGGAGGTGACTAAATGCCATTATTAGA CGATAATTTTTTAAAAATAAACTGAACTCTTTGTTCCGGGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGTTTTCAGCGATGA 100 TTerm_0271 NC_003197.2 3022027 3022050 24 3022055 3022078 24 4 83 0 28 75 25 80 20 0 3022052 ATACAGAAATAGCTTACTTTCAGA TCTAAAAGTAAGCTATGTTTTTAT True AAATAATTA CAGCTTGCC False True + ATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTAT CAGCTTGCC 64 STM2877 intergenic 3022024 3022078 + down TTATACAGAAATAGCTTACTTTCAGATAGTTCTAAAAGTAAGCTATGTTTTTAT ACTTTCTATCGCGGCAAACAAATAATTATACAGAAATAGCTTACTTTCAGATAGTTCTAAAAGTAAGCTATGTTTTTATCAGCTTGCCGTCGTCATAAGCAACT TTATACAGAAATAGCTTACTTTCAGATAGTTCTAAAAGTAAGCTATGTTTTTAT 54 TTerm_0272 NC_003197.2 3022027 3022050 24 3022055 3022078 24 4 83 0 28 75 25 80 20 0 3022052 ATACAGAAATAGCTTACTTTCAGA TCTAAAAGTAAGCTATGTTTTTAT True AAATAATTA CAGCTTGCC False True + ATACAGAAATAGCTTACTTTCAGA TAGT TCTAAAAGTAAGCTATGTTTTTAT CAGCTTGCC 64 STM2878 intergenic 3022024 3022078 - down ATAAAAACATAGCTTACTTTTAGAACTATCTGAAAGTAAGCTATTTCTGTATAA AGTTGCTTATGACGACGGCAAGCTGATAAAAACATAGCTTACTTTTAGAACTATCTGAAAGTAAGCTATTTCTGTATAATTATTTGTTTGCCGCGATAGAAAGT TTATACAGAAATAGCTTACTTTCAGATAGTTCTAAAAGTAAGCTATGTTTTTAT 54 TTerm_0273 NC_003197.2 3044991 3044997 7 3045003 3045009 7 5 100 0 14 28 71 28 71 0 3044999 CAGCAGC GCTGCTG True TTTTGATAC CTTTTTTTA False True + CAGCAGC ACCTC GCTGCTG CTTTTTTTA 60 STM2900 intergenic 3044839 3045264 + down GGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTGCTTTTTTTATTTGTGATAAAGAACGGCCTCCCAGACTTGGGAAATAGCCGAAACTTATACTGACAAACTATCGTCTCGTATATCGCGATAAACTGACATCCCCCTCCTGCCCCACATGTTGGCATTCTTACGATACCCCATCCACTTTTCGCGGATAACGCTCTTTTTACCCGTGACAGCGTATTGACGACCAGGCTAGTATAGCGGCAGAAACGTCCCGATGCCTGGAATGAATGGCAAACAGTCTATAAGGTG CCATGAAAGACTGCAAGCCTTATAAGGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTGCTTTTTTTATTTGTGATAAAGAACGGCCTCCCAGACTTGGGAAATAGCCGAAACTTATACTGACAAACTATCGTCTCGTATATCGCGATAAACTGACATCCCCCTCCTGCCCCACATGTTGGCATTCTTACGATACCCCATCCACTTTTCGCGGATAACGCTCTTTTTACCCGTGACAGCGTATTGACGACCAGGCTAGTATAGCGGCAGAAACGTCCCGATGCCTGGAATGAATGGCAAACAGTCTATAAGGTGATTGAATGGATACGACAGAAGAACT GGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTG 170 TTerm_0274 NC_003197.2 3044992 3044998 7 3045005 3045011 7 6 100 0 14 42 57 42 57 0 3045001 AGCAGCA TGCTGCT True TTTGATACA TTTTTTATT False True + AGCAGCA CCTCGC TGCTGCT TTTTTTATT 60 STM2900 intergenic 3044839 3045264 + down GGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTGCTTTTTTTATTTGTGATAAAGAACGGCCTCCCAGACTTGGGAAATAGCCGAAACTTATACTGACAAACTATCGTCTCGTATATCGCGATAAACTGACATCCCCCTCCTGCCCCACATGTTGGCATTCTTACGATACCCCATCCACTTTTCGCGGATAACGCTCTTTTTACCCGTGACAGCGTATTGACGACCAGGCTAGTATAGCGGCAGAAACGTCCCGATGCCTGGAATGAATGGCAAACAGTCTATAAGGTG CCATGAAAGACTGCAAGCCTTATAAGGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTGCTTTTTTTATTTGTGATAAAGAACGGCCTCCCAGACTTGGGAAATAGCCGAAACTTATACTGACAAACTATCGTCTCGTATATCGCGATAAACTGACATCCCCCTCCTGCCCCACATGTTGGCATTCTTACGATACCCCATCCACTTTTCGCGGATAACGCTCTTTTTACCCGTGACAGCGTATTGACGACCAGGCTAGTATAGCGGCAGAAACGTCCCGATGCCTGGAATGAATGGCAAACAGTCTATAAGGTGATTGAATGGATACGACAGAAGAACT GGCCATATCACCGTTGGCTGAACTCATCATGATATAATTAAGACCATATTTTGCATTGCCACTTAATATCAATATAATTATTATAGCTATGGTCACTTTTACGGTTGGCCATTTGTCTCTTACGTTGCATTTATCAATCTGCTTTTTGATACAGCAGCACCTCGCTGCTGCT 172 TTerm_0275 NC_003197.2 3065453 3065470 18 3065475 3065492 18 4 94 0 31 58 41 58 41 0 3065472 GTAAAAAAAAGGCCAGTC GACTGGCCTTTTTTTGAC True GACAAACGG AAGGGTACT True True + GTAAAAAAAAGGCCAGTC GACA GACTGGCCTTTTTTTGAC AAGGGTACT 94 STM2923 intergenic 3065456 3065501 + down AAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGACAAGGGTACT GCTGCTGGCAGAAGACAAACGGTAAAAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGACAAGGGTACTTACTCGCGGAACAGCGCTTCGATAT AAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGAC 36 TTerm_0276 NC_003197.2 3065453 3065470 18 3065475 3065492 18 4 94 0 31 58 41 58 41 0 3065472 GTAAAAAAAAGGCCAGTC GACTGGCCTTTTTTTGAC True GACAAACGG AAGGGTACT True True + GTAAAAAAAAGGCCAGTC GACA GACTGGCCTTTTTTTGAC AAGGGTACT 94 STM2924 intergenic 3065456 3065501 - down AGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTT ATATCGAAGCGCTGTTCCGCGAGTAAGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTTTTACCGTTTGTCTTCTGCCAGCAGC AAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGAC 36 TTerm_0277 NC_003197.2 3088134 3088143 10 3088149 3088158 10 5 100 0 20 50 50 50 50 0 3088145 AAAATCCGGC GCCGGATTTT True ACCAATTTA TCATAGCAG True True + AAAATCCGGC TGCCT GCCGGATTTT TCATAGCAG 80 STM2945 intergenic 3088108 3088196 + down AGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTTTCATAGCAGCAAGTATAATCATACCGCGTAAGGACAAT CAGTCGTAATATATTACTGACATAAAGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTTTCATAGCAGCAAGTATAATCATACCGCGTAAGGACAATTACCCTTCATGCAGCCCGCACTCGC AGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTT 50 TTerm_0278 NC_003197.2 3088134 3088143 10 3088149 3088158 10 5 100 0 20 50 50 50 50 0 3088145 AAAATCCGGC GCCGGATTTT True ACCAATTTA TCATAGCAG True True + AAAATCCGGC TGCCT GCCGGATTTT TCATAGCAG 80 STM2946 intergenic 3088108 3088196 - down ATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTTTAAATTGGTTATATTACTGACTATCT GCGAGTGCGGGCTGCATGAAGGGTAATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTTTAAATTGGTTATATTACTGACTATCTTTATGTCAGTAATATATTACGACTG AGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTT 50 TTerm_0279 NC_003197.2 3141261 3141267 7 3141272 3141278 7 4 100 0 14 42 57 42 57 0 3141269 AACACCC GGGTGTT True ACTTAATGA TTTTTGTAT False True + AACACCC TTAC GGGTGTT TTTTTGTAT 60 STM2990 intergenic 3141249 3141362 + down CCAACTTAATGAACACCCTTACGGGTGTTTTTTTGTATCTGTCGTCTGGTCCGCAACGACAGTGCGGGCAGCATCCTACTTACCCGCGCAATAAACTCGCCGTCATCTCAGGT GTCGGTTCAAATCCGGCCCCCGCAACCAACTTAATGAACACCCTTACGGGTGTTTTTTTGTATCTGTCGTCTGGTCCGCAACGACAGTGCGGGCAGCATCCTACTTACCCGCGCAATAAACTCGCCGTCATCTCAGGTTAACTTCTTCTCGCCAGCGTCGCCC CCAACTTAATGAACACCCTTACGGGTGTT 29 TTerm_0280 NC_003197.2 3141261 3141267 7 3141272 3141278 7 4 100 0 14 42 57 42 57 0 3141269 AACACCC GGGTGTT True ACTTAATGA TTTTTGTAT False True + AACACCC TTAC GGGTGTT TTTTTGTAT 60 STM2991 intergenic 3141249 3141362 - down ACCTGAGATGACGGCGAGTTTATTGCGCGGGTAAGTAGGATGCTGCCCGCACTGTCGTTGCGGACCAGACGACAGATACAAAAAAACACCCGTAAGGGTGTTCATTAAGTTGG GGGCGACGCTGGCGAGAAGAAGTTAACCTGAGATGACGGCGAGTTTATTGCGCGGGTAAGTAGGATGCTGCCCGCACTGTCGTTGCGGACCAGACGACAGATACAAAAAAACACCCGTAAGGGTGTTCATTAAGTTGGTTGCGGGGGCCGGATTTGAACCGAC CCAACTTAATGAACACCCTTACGGGTGTT 29 TTerm_0281 NC_003197.2 3177497 3177506 10 3177513 3177522 10 6 90 0 15 55 45 55 44 0 3177509 AAAACCCTGT ACAGGGCTTT True ATCATAAAA ATCAGTTTT True True + AAAACCCTGT ACGAGG ACAGGGCTTT ATCAGTTTT 62 STM3017 intergenic 3177396 3177580 - down ATCCGCTACTGACAAATGCGTTTCTGGGAAAATCGACGCTTTGGCCGAAAAAACTGATAAAGCCCTGTCCTCGTACAGGGTTTTTTTATGATCTCATTAGCATAGTCCATATTGTGGGTTTAACTTAATCCATATATTGTTAAATAATAGCTATGATCAATGCTTTAATTCATTGAAATATTGG TAGATGGCGGTTGGCTGGCGCGTTAATCCGCTACTGACAAATGCGTTTCTGGGAAAATCGACGCTTTGGCCGAAAAAACTGATAAAGCCCTGTCCTCGTACAGGGTTTTTTTATGATCTCATTAGCATAGTCCATATTGTGGGTTTAACTTAATCCATATATTGTTAAATAATAGCTATGATCAATGCTTTAATTCATTGAAATATTGGTGGTTTAAAAAAATACCCGGCAACG CCAATATTTCAATGAATTAAAGCATTGATCATAGCTATTATTTAACAATATATGGATTAAGTTAAACCCACAATATGGACTATGCTAATGAGATCATAAAAAAACCCTGTACGAGGACAGGGCTTT 126 TTerm_0282 NC_003197.2 3179599 3179604 6 3179611 3179616 6 6 100 0 12 16 83 16 83 0 3179607 GCCCTC GAGGGC True CTGGCTTTG TTTTTATGA False True + GCCCTC GTGATA GAGGGC TTTTTATGA 64 STM3019 intergenic 3179243 3179664 - down ATCCTGCGCCAGCCATCCTTTTCCTGTTTCAGTATTCCGTCATAAAAAGCCCTCTATCACGAGGGCAAAGCCAGTGACAGAACCCCCTTTTTCGTTATAGCGCGGAACGTCTTGCCGCGTCGGGCATTGCAGACGCATACCGCTTTTAATTCAATTCGCACATCAGACCTCGTTCTAAAACAAGCTCCAATTTTTATCTGGGTAACCGCATACAGCATCTGGCGCGCATGTCTGAAAATCAGACAAATGCGTAAGTTTTAGCGCCGATCGTGATCGCTACAGCAGTTTTAAAAATAACCAACCATATAAATGAAACGTTGTTTTATTTATTGTTGAAAACCTTTATCCAGGCGACTATGATGCCGTTAAATAAATCAAAACAGTGTTTTGATTTTGTGCCATTGCGATCGATTTATCATTG TTGCTTTAACCATTGAACGCGACTGATCCTGCGCCAGCCATCCTTTTCCTGTTTCAGTATTCCGTCATAAAAAGCCCTCTATCACGAGGGCAAAGCCAGTGACAGAACCCCCTTTTTCGTTATAGCGCGGAACGTCTTGCCGCGTCGGGCATTGCAGACGCATACCGCTTTTAATTCAATTCGCACATCAGACCTCGTTCTAAAACAAGCTCCAATTTTTATCTGGGTAACCGCATACAGCATCTGGCGCGCATGTCTGAAAATCAGACAAATGCGTAAGTTTTAGCGCCGATCGTGATCGCTACAGCAGTTTTAAAAATAACCAACCATATAAATGAAACGTTGTTTTATTTATTGTTGAAAACCTTTATCCAGGCGACTATGATGCCGTTAAATAAATCAAAACAGTGTTTTGATTTTGTGCCATTGCGATCGATTTATCATTGGAGGGAAAAGTGGACGTAAGGCAAA CAATGATAAATCGATCGCAATGGCACAAAATCAAAACACTGTTTTGATTTATTTAACGGCATCATAGTCGCCTGGATAAAGGTTTTCAACAATAAATAAAACAACGTTTCATTTATATGGTTGGTTATTTTTAAAACTGCTGTAGCGATCACGATCGGCGCTAAAACTTACGCATTTGTCTGATTTTCAGACATGCGCGCCAGATGCTGTATGCGGTTACCCAGATAAAAATTGGAGCTTGTTTTAGAACGAGGTCTGATGTGCGAATTGAATTAAAAGCGGTATGCGTCTGCAATGCCCGACGCGGCAAGACGTTCCGCGCTATAACGAAAAAGGGGGTTCTGTCACTGGCTTTGCCCTCGTGATAGAGGGC 373 TTerm_0283 NC_003197.2 3183761 3183776 16 3183783 3183798 16 6 87 0 22 59 40 57 42 0 3183779 TAAAAGATAGCCGGGA TCCCGGCTATTTTATA True GGCTAAAGT TAAGAATCC True True + TAAAAGATAGCCGGGA TATAAC TCCCGGCTATTTTATA TAAGAATCC 84 STM3022 intergenic 3183758 3183789 + down AGTAAAAGATAGCCGGGATATAACTCCCGGC CGTATCGGTGATGTTTTTCGGCTAAAGTAAAAGATAGCCGGGATATAACTCCCGGCTATTTTATATAAGAATCCAGCACCT AGTAAAAGATAGCCGGGATATAACTCCCGGCTATTTTATA 40 TTerm_0284 NC_003197.2 3183761 3183776 16 3183783 3183798 16 6 87 0 22 59 40 57 42 0 3183779 TAAAAGATAGCCGGGA TCCCGGCTATTTTATA True GGCTAAAGT TAAGAATCC True True + TAAAAGATAGCCGGGA TATAAC TCCCGGCTATTTTATA TAAGAATCC 84 STM3023 intergenic 3183758 3183789 - down GCCGGGAGTTATATCCCGGCTATCTTTTACT AGGTGCTGGATTCTTATATAAAATAGCCGGGAGTTATATCCCGGCTATCTTTTACTTTAGCCGAAAAACATCACCGATACG AGTAAAAGATAGCCGGGATATAACTCCCGGCTATTTTATA 40 TTerm_0285 NC_003197.2 3236356 3236367 12 3236372 3236383 12 4 100 0 24 41 58 41 58 0 3236369 AAAACGGGTCGC GCGACCCGTTTT True GAGAATAAA ATGCCGTAT True True + AAAACGGGTCGC CGAA GCGACCCGTTTT ATGCCGTAT 88 STM3075 intergenic 3236355 3236399 + down AAAACGGGTCGCCGAAGCGACCCGTTTTATGCCGTATTAAGGAT CGGCAGGTTGTCAAAGGGAGAATAAAAAACGGGTCGCCGAAGCGACCCGTTTTATGCCGTATTAAGGATTACAGCAGTGCTTTCGCTTTGGCGA AAAACGGGTCGCCGAAGCGACCCGTTTT 28 TTerm_0286 NC_003197.2 3236356 3236367 12 3236372 3236383 12 4 100 0 24 41 58 41 58 0 3236369 AAAACGGGTCGC GCGACCCGTTTT True GAGAATAAA ATGCCGTAT True True + AAAACGGGTCGC CGAA GCGACCCGTTTT ATGCCGTAT 88 STM3076 intergenic 3236355 3236399 - down ATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTTT TCGCCAAAGCGAAAGCACTGCTGTAATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTTTTTATTCTCCCTTTGACAACCTGCCG AAAACGGGTCGCCGAAGCGACCCGTTTT 28 TTerm_0287 NC_003197.2 3284795 3284800 6 3284808 3284813 6 7 100 0 12 16 83 16 83 0 3284803 ACCCGC GCGGGT True GCTTTTTAA CTTTTCCCC False True + ACCCGC GTCAATT GCGGGT CTTTTCCCC 64 STM3124 intergenic 3284780 3284884 + down AAGCGTGCTTTTTAACCCGCGTCAATTGCGGGTCTTTTCCCCATTGTCATATATGCCTGAATTAATACCACTCTCTGATCTGATGCCTCAATAAAATGTCATAT GGTACAACATGCACAGCATATGTGAAAGCGTGCTTTTTAACCCGCGTCAATTGCGGGTCTTTTCCCCATTGTCATATATGCCTGAATTAATACCACTCTCTGATCTGATGCCTCAATAAAATGTCATATTATCTGGCGTCGGTATCCTGTTGCA AAGCGTGCTTTTTAACCCGCGTCAATTGCGGGT 33 TTerm_0288 NC_003197.2 3284795 3284800 6 3284808 3284813 6 7 100 0 12 16 83 16 83 0 3284803 ACCCGC GCGGGT True GCTTTTTAA CTTTTCCCC False True + ACCCGC GTCAATT GCGGGT CTTTTCCCC 64 STM3125 intergenic 3284780 3284884 - down ATATGACATTTTATTGAGGCATCAGATCAGAGAGTGGTATTAATTCAGGCATATATGACAATGGGGAAAAGACCCGCAATTGACGCGGGTTAAAAAGCACGCTT TGCAACAGGATACCGACGCCAGATAATATGACATTTTATTGAGGCATCAGATCAGAGAGTGGTATTAATTCAGGCATATATGACAATGGGGAAAAGACCCGCAATTGACGCGGGTTAAAAAGCACGCTTTCACATATGCTGTGCATGTTGTACC AAGCGTGCTTTTTAACCCGCGTCAATTGCGGGT 33 TTerm_0289 NC_003197.2 3294305 3294314 10 3294320 3294329 10 5 90 0 15 35 65 33 66 0 3294316 ACGCGCTGGT ACCAACGCGT True AAATGATAA ATTTTTACC False True + ACGCGCTGGT ATAAA ACCAACGCGT ATTTTTACC 54 STM3134 intergenic 3294035 3294426 - down AAGCTGTCTCGGTTTCACAGGCCTGATAAGCGAAGCGCTACCGGGTTCTAACGGCCACCTTCGGGTGGCCGTCTTCATTACCCTTATCGGTAAAAATACGCGTTGGTTTTATACCAGCGCGTTATCATTTAGTTTGCCTGATTATTTTCAGATGCTGAAAATAATATTGTGGTAAGGGTTATTGTTTTTCGCCTGGATTTTTATCGACTCTCTGTCTCGCTGCGATCATCGATAAAGTCCCCTTTATGTAAATAAAGGTTCAATGCTTCTACTCTTTTCTCCATATATTTTGCGCAGCTTCACAAAAAATAACCTGATGTCGTAATGTCCACTCCCTAATATTCTCCATGCGCTATACGTTAATTTAAGTTTAAATTTCATGCCGGGGATA AACAGCCGCTGGCGTCTCACCGCTAAAGCTGTCTCGGTTTCACAGGCCTGATAAGCGAAGCGCTACCGGGTTCTAACGGCCACCTTCGGGTGGCCGTCTTCATTACCCTTATCGGTAAAAATACGCGTTGGTTTTATACCAGCGCGTTATCATTTAGTTTGCCTGATTATTTTCAGATGCTGAAAATAATATTGTGGTAAGGGTTATTGTTTTTCGCCTGGATTTTTATCGACTCTCTGTCTCGCTGCGATCATCGATAAAGTCCCCTTTATGTAAATAAAGGTTCAATGCTTCTACTCTTTTCTCCATATATTTTGCGCAGCTTCACAAAAAATAACCTGATGTCGTAATGTCCACTCCCTAATATTCTCCATGCGCTATACGTTAATTTAAGTTTAAATTTCATGCCGGGGATATCACGATGCCACGTAATTTTACTGT TATCCCCGGCATGAAATTTAAACTTAAATTAACGTATAGCGCATGGAGAATATTAGGGAGTGGACATTACGACATCAGGTTATTTTTTGTGAAGCTGCGCAAAATATATGGAGAAAAGAGTAGAAGCATTGAACCTTTATTTACATAAAGGGGACTTTATCGATGATCGCAGCGAGACAGAGAGTCGATAAAAATCCAGGCGAAAAACAATAACCCTTACCACAATATTATTTTCAGCATCTGAAAATAATCAGGCAAACTAAATGATAACGCGCTGGTATAAAACCAACGCGT 294 TTerm_0290 NC_003197.2 3316045 3316051 7 3316061 3316067 7 9 100 0 14 57 42 57 42 0 3316055 GGAGAAT ATTCTCC True CAAGGCGCG ATTTTTTTA False True + GGAGAAT ATATAATGC ATTCTCC ATTTTTTTA 44 STM3153 intergenic 3315981 3316281 - down AGCCGCCGTCAACGGCGGGGCAGTCGGGCAAAGGATGCTGAGCCCGGCTGTAAAACAGCGCTTCTTTAACGGTGGATAACCGTCTCCCTGCAGCCTTACGCAATATTTTTACTACATCTATTCATTTACTCAGTAATAACACTGAAAGATTTTCTCTGCGTTCACAGATATATAACATCTGCGGGTACGTAAACGGCGGTAACTGTAAAAAAATGGAGAATGCATTATATATTCTCCGCGCCTTGCCGATAACGAGAGTGCGTCATCGTCTGATGACTAATCTCTTATATTCAGCAAGGA ACAGATTGACGCGGCATAACCATTGAGCCGCCGTCAACGGCGGGGCAGTCGGGCAAAGGATGCTGAGCCCGGCTGTAAAACAGCGCTTCTTTAACGGTGGATAACCGTCTCCCTGCAGCCTTACGCAATATTTTTACTACATCTATTCATTTACTCAGTAATAACACTGAAAGATTTTCTCTGCGTTCACAGATATATAACATCTGCGGGTACGTAAACGGCGGTAACTGTAAAAAAATGGAGAATGCATTATATATTCTCCGCGCCTTGCCGATAACGAGAGTGCGTCATCGTCTGATGACTAATCTCTTATATTCAGCAAGGAAATTCATATGCGTTTGCTGCAAAAC TCCTTGCTGAATATAAGAGATTAGTCATCAGACGATGACGCACTCTCGTTATCGGCAAGGCGCGGAGAATATATAATGCATTCTCC 86 TTerm_0291 NC_003197.2 3328481 3328505 25 3328511 3328535 25 5 68 0 10 74 26 82 17 0 3328507 CAGGCATTATACCTTAGATTATATA TATCTATTTTAATATATCAACCCTG True AGCGCCGTC GTAGGTTAA False True + CAGGCATTATACCTTAGATTATATA CTTCT TATCTATTTTAATATATCAACCCTG GTAGGTTAA 28 STM3167 intergenic 3328390 3328945 + down ATACGGAGCACTTCTGCCGGATGGCGGTGTAAGCACCTTATCCGGCCTACAAAACTGTGCTATTCATAGACCTGATAAGCGCAGCGCCGTCAGGCATTATACCTTAGATTATATACTTCTTATCTATTTTAATATATCAACCCTGGTAGGTTAAATATTACGGCGCGTGGCTAAATATTTCGTACAAAAACCATCCAGGAATAGCGGCAATAACACCCATTAAAATTATCCCTGCAAGAGTCATTTGCCTGTCTTCACGTTTTTCCATATTACATGCTTTAATAGCCATTATGAATATAACAACAGCTATTATAGCAATTACGATAAAACAGGGAATAATAATCATACCCATGATATCCCCTCCTCTGGGGCTGTATACAAGCATCATGCCTTAATCATTAAGGTAATATATAATTAATTTATACAATCAATAATATTTAAATAAAATATAAAGCTCCCCGTAATTTAGCAATTACTAAAGATCGACACAATATATTTAGATGTCTGTTACTTCCAGAAACATTAGCTTCCAGAAGCAACAGATTCAAAGGTAAT ATACGGAGCACTTCTGCCGGATGGCGGTGTAAGCACCTTATCCGGCCTACAAAACTGTGCTATTCATAGACCTGATAAGCGCAGCGCCGTCAGGCATTATACCTTAGATTATATACTTCTTATCTATTTTAATATATCAACCCTG 145 TTerm_0292 NC_003197.2 3328481 3328505 25 3328511 3328535 25 5 68 0 10 74 26 82 17 0 3328507 CAGGCATTATACCTTAGATTATATA TATCTATTTTAATATATCAACCCTG True AGCGCCGTC GTAGGTTAA False True + CAGGCATTATACCTTAGATTATATA CTTCT TATCTATTTTAATATATCAACCCTG GTAGGTTAA 28 STM3168 intergenic 3328390 3328945 - down ATTACCTTTGAATCTGTTGCTTCTGGAAGCTAATGTTTCTGGAAGTAACAGACATCTAAATATATTGTGTCGATCTTTAGTAATTGCTAAATTACGGGGAGCTTTATATTTTATTTAAATATTATTGATTGTATAAATTAATTATATATTACCTTAATGATTAAGGCATGATGCTTGTATACAGCCCCAGAGGAGGGGATATCATGGGTATGATTATTATTCCCTGTTTTATCGTAATTGCTATAATAGCTGTTGTTATATTCATAATGGCTATTAAAGCATGTAATATGGAAAAACGTGAAGACAGGCAAATGACTCTTGCAGGGATAATTTTAATGGGTGTTATTGCCGCTATTCCTGGATGGTTTTTGTACGAAATATTTAGCCACGCGCCGTAATATTTAACCTACCAGGGTTGATATATTAAAATAGATAAGAAGTATATAATCTAAGGTATAATGCCTGACGGCGCTGCGCTTATCAGGTCTATGAATAGCACAGTTTTGTAGGCCGGATAAGGTGCTTACACCGCCATCCGGCAGAAGTGCTCCGTAT ATACGGAGCACTTCTGCCGGATGGCGGTGTAAGCACCTTATCCGGCCTACAAAACTGTGCTATTCATAGACCTGATAAGCGCAGCGCCGTCAGGCATTATACCTTAGATTATATACTTCTTATCTATTTTAATATATCAACCCTG 145 TTerm_0293 NC_003197.2 3342811 3342823 13 3342831 3342843 13 7 84 0 16 57 42 54 45 0 3342826 CAGAGACTTTTGC GCAAAAGACTTTG True GTTGGTAAC CACATTTTG False True + CAGAGACTTTTGC CAAAAAC GCAAAAGACTTTG CACATTTTG 48 STM3178 intergenic 3342810 3342906 + down CAGAGACTTTTGCCAAAAACGCAAAAGACTTTGCACATTTTGCTAATTTCACCGCACCGCCCGTCAGCGTAGAATCAGCAGCAAACGCATTTCTTG ATTTGAGGCCGTAGTAAGTTGGTAACAGAGACTTTTGCCAAAAACGCAAAAGACTTTGCACATTTTGCTAATTTCACCGCACCGCCCGTCAGCGTAGAATCAGCAGCAAACGCATTTCTTGAGGACACAAAATGAGTAACATCCTG CAGAGACTTTTGCCAAAAACGCAAAAGACTTTG 33 TTerm_0294 NC_003197.2 3357704 3357717 14 3357722 3357735 14 4 92 0 23 46 53 46 53 0 3357719 AAAGCAGAGGTCTG CAGGCCTCTGCTTT True GATAAACCA TCTCACAAT False True + AAAGCAGAGGTCTG CATT CAGGCCTCTGCTTT TCTCACAAT 86 STM3194 intergenic 3357687 3357858 + down CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGAT ATTGAAACTGGCCAGAGGCAAATAACCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGATCAGCTGGCTTTGCGCTCATGCGCCT CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTT 48 TTerm_0295 NC_003197.2 3357704 3357717 14 3357722 3357735 14 4 92 0 23 46 53 46 53 0 3357719 AAAGCAGAGGTCTG CAGGCCTCTGCTTT True GATAAACCA TCTCACAAT False True + AAAGCAGAGGTCTG CATT CAGGCCTCTGCTTT TCTCACAAT 86 STM3195 intergenic 3357687 3357858 - down ATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGG AGGCGCATGAGCGCAAAGCCAGCTGATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGGTTATTTGCCTCTGGCCAGTTTCAAT CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTT 48 TTerm_0296 NC_003197.2 3357808 3357821 14 3357826 3357839 14 4 100 0 28 64 35 64 35 0 3357823 AAAAAAGCCGATGA TCATCGGCTTTTTT True AGGAATACA CAACCATGA True True + AAAAAAGCCGATGA CATC TCATCGGCTTTTTT CAACCATGA 80 STM3194 intergenic 3357687 3357858 + down CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGAT ATTGAAACTGGCCAGAGGCAAATAACCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGATCAGCTGGCTTTGCGCTCATGCGCCT CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTT 152 TTerm_0297 NC_003197.2 3357808 3357821 14 3357826 3357839 14 4 100 0 28 64 35 64 35 0 3357823 AAAAAAGCCGATGA TCATCGGCTTTTTT True AGGAATACA CAACCATGA True True + AAAAAAGCCGATGA CATC TCATCGGCTTTTTT CAACCATGA 80 STM3195 intergenic 3357687 3357858 - down ATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGG AGGCGCATGAGCGCAAAGCCAGCTGATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGGTTATTTGCCTCTGGCCAGTTTCAAT CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTT 152 TTerm_0298 NC_003197.2 3362126 3362134 9 3362139 3362147 9 4 88 0 13 27 72 25 75 0 3362136 TCCCTGGTC GACCGGGGA True ATCTCCTGT TTTTTTTAT False True + TCCCTGGTC ATAA GACCGGGGA TTTTTTTAT 66 STM3199 intergenic 3362106 3362566 + down CCCCCCGCCATATCTCCTGTCCCTGGTCATAAGACCGGGGATTTTTTTATCTTTTTTCCACCTTGTCTGTACAAAGCGTTATGACCAGCAGGCCATTTTGCGTGGGCGATCCAGTAACGCAAAATCGGCGGGAGAAAGCCCTTGCGCCAGACAGGCCACTCACCAACAATCGCGATGTCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAGGAAGGGGCTTTAATAAGGAAAGGGTTATGATGCACCAGGTCATCATACTGATTGTTCTGTTACTGATAAGTTTCGCAGCTTACTAACAGACAATCAGAGGGGGGGAGAGATCCCCTCTCACCCTTATTCCTTTACTTTAGGTCGAAAAAAAAGCAGCGTCAACCGCGAGATACGCGTCGAAACAAAATGTCCGACGCGCCTTCAAAATCAGCGCCCGCCGCGTCTGTAACGCCTGATGACGCGGTTT CGAAGCAACGATAAAAGAGCAATAACCCCCCGCCATATCTCCTGTCCCTGGTCATAAGACCGGGGATTTTTTTATCTTTTTTCCACCTTGTCTGTACAAAGCGTTATGACCAGCAGGCCATTTTGCGTGGGCGATCCAGTAACGCAAAATCGGCGGGAGAAAGCCCTTGCGCCAGACAGGCCACTCACCAACAATCGCGATGTCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAGGAAGGGGCTTTAATAAGGAAAGGGTTATGATGCACCAGGTCATCATACTGATTGTTCTGTTACTGATAAGTTTCGCAGCTTACTAACAGACAATCAGAGGGGGGGAGAGATCCCCTCTCACCCTTATTCCTTTACTTTAGGTCGAAAAAAAAGCAGCGTCAACCGCGAGATACGCGTCGAAACAAAATGTCCGACGCGCCTTCAAAATCAGCGCCCGCCGCGTCTGTAACGCCTGATGACGCGGTTTTACTTCTCGCTCTCGGTCTGGATCT CCCCCCGCCATATCTCCTGTCCCTGGTCATAAGACCGGGGA 41 TTerm_0299 NC_003197.2 3362126 3362134 9 3362139 3362147 9 4 88 0 13 27 72 25 75 0 3362136 TCCCTGGTC GACCGGGGA True ATCTCCTGT TTTTTTTAT False True + TCCCTGGTC ATAA GACCGGGGA TTTTTTTAT 66 STM3200 intergenic 3362106 3362566 - down AAACCGCGTCATCAGGCGTTACAGACGCGGCGGGCGCTGATTTTGAAGGCGCGTCGGACATTTTGTTTCGACGCGTATCTCGCGGTTGACGCTGCTTTTTTTTCGACCTAAAGTAAAGGAATAAGGGTGAGAGGGGATCTCTCCCCCCCTCTGATTGTCTGTTAGTAAGCTGCGAAACTTATCAGTAACAGAACAATCAGTATGATGACCTGGTGCATCATAACCCTTTCCTTATTAAAGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCCCCTTGCTGACATCGCGATTGTTGGTGAGTGGCCTGTCTGGCGCAAGGGCTTTCTCCCGCCGATTTTGCGTTACTGGATCGCCCACGCAAAATGGCCTGCTGGTCATAACGCTTTGTACAGACAAGGTGGAAAAAAGATAAAAAAATCCCCGGTCTTATGACCAGGGACAGGAGATATGGCGGGGGG AGATCCAGACCGAGAGCGAGAAGTAAAACCGCGTCATCAGGCGTTACAGACGCGGCGGGCGCTGATTTTGAAGGCGCGTCGGACATTTTGTTTCGACGCGTATCTCGCGGTTGACGCTGCTTTTTTTTCGACCTAAAGTAAAGGAATAAGGGTGAGAGGGGATCTCTCCCCCCCTCTGATTGTCTGTTAGTAAGCTGCGAAACTTATCAGTAACAGAACAATCAGTATGATGACCTGGTGCATCATAACCCTTTCCTTATTAAAGCCCCTTCCTCGGGAGGGGCTTTCCCGTTTCAGCCCCTTGCTGACATCGCGATTGTTGGTGAGTGGCCTGTCTGGCGCAAGGGCTTTCTCCCGCCGATTTTGCGTTACTGGATCGCCCACGCAAAATGGCCTGCTGGTCATAACGCTTTGTACAGACAAGGTGGAAAAAAGATAAAAAAATCCCCGGTCTTATGACCAGGGACAGGAGATATGGCGGGGGGTTATTGCTCTTTTATCGTTGCTTCG CCCCCCGCCATATCTCCTGTCCCTGGTCATAAGACCGGGGA 41 TTerm_0300 NC_003197.2 3371470 3371477 8 3371484 3371491 8 6 87 0 11 100 0 100 0 0 3371480 AAAAAATA TATTTATT True TTTGGTTTA TTTATTTCA False True + AAAAAATA TAAAAT TATTTATT TTTATTTCA 22 STM3206 intergenic 3371408 3371493 - down AAAATAAATAATTTTATATTTTTTAAACCAAACGGTTATATATGGGGTCTTAACGCGAGATCCATTTTTGCAGTGTTTTTCATTT TTGAGCGTGGCAATAATCTGAAATAAAAATAAATAATTTTATATTTTTTAAACCAAACGGTTATATATGGGGTCTTAACGCGAGATCCATTTTTGCAGTGTTTTTCATTTTAGGGGTTTATTGATGAGCGATATG AAATGAAAAACACTGCAAAAATGGATCTCGCGTTAAGACCCCATATATAACCGTTTGGTTTAAAAAATATAAAATTATTTATT 83 TTerm_0301 NC_003197.2 3378272 3378281 10 3378286 3378295 10 4 100 0 20 30 70 30 70 0 3378283 AAACGCCGCC GGCGGCGTTT True ACACGTATA TTTTATCAG False True + AAACGCCGCC GCAA GGCGGCGTTT TTTTATCAG 88 STM3211 intergenic 3378255 3378379 + down TTCGCCGCACACGTATAAACGCCGCCGCAAGGCGGCGTTTTTTTATCAGGCCATGCGCAAGCGCCCTATTTGGCCTGCAGAATTTCTACACAGCGCGAGTATTCGCGCCCTCATTCCCCATTGC GCTGCGCAGCTTCCTCGACGATTAATTCGCCGCACACGTATAAACGCCGCCGCAAGGCGGCGTTTTTTTATCAGGCCATGCGCAAGCGCCCTATTTGGCCTGCAGAATTTCTACACAGCGCGAGTATTCGCGCCCTCATTCCCCATTGCTATAGCCCACGCATAATGAGCGCTT TTCGCCGCACACGTATAAACGCCGCCGCAAGGCGGCGTTT 40 TTerm_0302 NC_003197.2 3378272 3378281 10 3378286 3378295 10 4 100 0 20 30 70 30 70 0 3378283 AAACGCCGCC GGCGGCGTTT True ACACGTATA TTTTATCAG False True + AAACGCCGCC GCAA GGCGGCGTTT TTTTATCAG 88 STM3212 intergenic 3378255 3378379 - down GCAATGGGGAATGAGGGCGCGAATACTCGCGCTGTGTAGAAATTCTGCAGGCCAAATAGGGCGCTTGCGCATGGCCTGATAAAAAAACGCCGCCTTGCGGCGGCGTTTATACGTGTGCGGCGAA AAGCGCTCATTATGCGTGGGCTATAGCAATGGGGAATGAGGGCGCGAATACTCGCGCTGTGTAGAAATTCTGCAGGCCAAATAGGGCGCTTGCGCATGGCCTGATAAAAAAACGCCGCCTTGCGGCGGCGTTTATACGTGTGCGGCGAATTAATCGTCGAGGAAGCTGCGCAGC TTCGCCGCACACGTATAAACGCCGCCGCAAGGCGGCGTTT 40 TTerm_0303 NC_003197.2 3392223 3392241 19 3392246 3392264 19 4 84 0 23 55 44 56 43 0 3392243 AAAAGCAACGGCTAATGCC GGCGTTAGCCGTTTTTTTT True CTATGCATA TTTTGCATA True True + AAAAGCAACGGCTAATGCC ATTC GGCGTTAGCCGTTTTTTTT TTTTGCATA 78 STM3223 intergenic 3392011 3392272 + down AATTATGTAAATCATATGTTACAGGTCATTGACTCTACGCGTGGCCTGTCATACTTTGTTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCAAGGTCTATGCATAAAAGCAACGGCTAATGCCATTCGGCGTTAGCCGTTTTTTTTTTTTGCAT TCTGACCCATCCCCTTACTGCGTAAAATTATGTAAATCATATGTTACAGGTCATTGACTCTACGCGTGGCCTGTCATACTTTGTTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCAAGGTCTATGCATAAAAGCAACGGCTAATGCCATTCGGCGTTAGCCGTTTTTTTTTTTTGCATAGGGAGAAATAATGAATACTGTTGG AATTATGTAAATCATATGTTACAGGTCATTGACTCTACGCGTGGCCTGTCATACTTTGTTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCAAGGTCTATGCATAAAAGCAACGGCTAATGCCATTCGGCGTTAGCCGTTTTTTTT 253 TTerm_0304 NC_003197.2 3393280 3393295 16 3393303 3393318 16 7 100 0 32 43 56 43 56 0 3393298 CAAAAACGCCCGACAG CTGTCGGGCGTTTTTG True TGCCCCGTC TTTAACATG True True + CAAAAACGCCCGACAG CGCACAC CTGTCGGGCGTTTTTG TTTAACATG 96 STM3224 intergenic 3393252 3393495 + down TCTTTTATCGGGGTAAACCTGCCCCGTCAAAAACGCCCGACAGCGCACACCTGTCGGGCGTTTTTGTTTAACATGTCACAATACTGTTAATATAAAGTTATAAAACATGATCACAGCAAAAAATCCAGGATATTTCGCTTCCCGAACCTTCAACTTTCCTTATACTCAACCAGGCAAACACTTTGTTACATCCTGAAAGATGCGCCGTAAGAGCGTGCAGGGGATGACCAGCAACACAATACA CGATAAGAAACTACGAGCGCAATAATCTTTTATCGGGGTAAACCTGCCCCGTCAAAAACGCCCGACAGCGCACACCTGTCGGGCGTTTTTGTTTAACATGTCACAATACTGTTAATATAAAGTTATAAAACATGATCACAGCAAAAAATCCAGGATATTTCGCTTCCCGAACCTTCAACTTTCCTTATACTCAACCAGGCAAACACTTTGTTACATCCTGAAAGATGCGCCGTAAGAGCGTGCAGGGGATGACCAGCAACACAATACAAGGAATATGAAATGGCTACGCAACG TCTTTTATCGGGGTAAACCTGCCCCGTCAAAAACGCCCGACAGCGCACACCTGTCGGGCGTTTTTG 66 TTerm_0305 NC_003197.2 3397823 3397840 18 3397845 3397862 18 4 88 0 26 38 61 37 62 0 3397842 AGCATCGCGCCATCAGGT ACCTGGTGGCGCGATACT True TCTTTTATA TTTATGCAT False True + AGCATCGCGCCATCAGGT TATC ACCTGGTGGCGCGATACT TTTATGCAT 84 STM3231 intergenic 3397807 3397952 + down TATCTTTTCTTTTATAGCATCGCGCCATCAGGTTATCACCTGGTGGCGCGATACTTTTATGCATATCGTCTCTTTAGCAATCACTCAAATTTTTTGAAAAAATTTGGCAATTTTCCTTGCTAACAATTCCTGCACGCCACGTTTA CCGTCAACAACAGCTCCGCGGTTAATATCTTTTCTTTTATAGCATCGCGCCATCAGGTTATCACCTGGTGGCGCGATACTTTTATGCATATCGTCTCTTTAGCAATCACTCAAATTTTTTGAAAAAATTTGGCAATTTTCCTTGCTAACAATTCCTGCACGCCACGTTTATGATTCTCTCCAGCGATAACAATGA TATCTTTTCTTTTATAGCATCGCGCCATCAGGTTATCACCTGGTGGCGCGATACT 55 TTerm_0306 NC_003197.2 3398457 3398466 10 3398475 3398484 10 8 100 0 20 50 50 50 50 0 3398470 AAAAGCGAGG CCTCGCTTTT True TCAATTAAA GTCATCTGA True True + AAAAGCGAGG GAATAGCG CCTCGCTTTT GTCATCTGA 80 STM3232 intergenic 3398437 3398493 + down GCAATCTATACTCAATTAAAAAAGCGAGGGAATAGCGCCTCGCTTTTGTCATCTGA CCGTCTGCTGAATAAAAAGTGGTAAGCAATCTATACTCAATTAAAAAAGCGAGGGAATAGCGCCTCGCTTTTGTCATCTGAAGGAGAGAGACATGGGACAACTGAT GCAATCTATACTCAATTAAAAAAGCGAGGGAATAGCGCCTCGCTTTT 47 TTerm_0307 NC_003197.2 3404921 3404932 12 3404937 3404948 12 4 100 0 24 41 58 41 58 0 3404934 AAAAGGGCGCAC GTGCGCCCTTTT True CACAACAAA CTCAACTTC True True + AAAAGGGCGCAC TTTG GTGCGCCCTTTT CTCAACTTC 88 STM3240 intergenic 3404698 3405005 - down GACCCGACAGGCGCAGAGTGAGCAGGCTATGGGATAACGTAGAAGACAGAAGTTGAGAAAAGGGCGCACCAAAGTGCGCCCTTTTTTGTTGTGATACGCGTCAAATAGAGAAAATAACAACATTAAACCAATAGTAAATAGAAAAGAATTCTTAACCCACAAGAAATGCAGGCGTTTTATTGGTAAGTTTTTCTCTTATCGTGCGCGTATGATTTTCTTATTACAAGAAAGTACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAACCTCTACCTACACATTGAGC TGGCGATTAAAGTCGTTTGTGGATAGACCCGACAGGCGCAGAGTGAGCAGGCTATGGGATAACGTAGAAGACAGAAGTTGAGAAAAGGGCGCACCAAAGTGCGCCCTTTTTTGTTGTGATACGCGTCAAATAGAGAAAATAACAACATTAAACCAATAGTAAATAGAAAAGAATTCTTAACCCACAAGAAATGCAGGCGTTTTATTGGTAAGTTTTTCTCTTATCGTGCGCGTATGATTTTCTTATTACAAGAAAGTACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAACCTCTACCTACACATTGAGCGAGAATTTTATGGAATCGGCAAGTA GCTCAATGTGTAGGTAGAGGTTTTTTTTATTTTTCGTGCCGCAGCAAGGCGATATGCAGAACGTGAGGTGCAGGTACTTTCTTGTAATAAGAAAATCATACGCGCACGATAAGAGAAAAACTTACCAATAAAACGCCTGCATTTCTTGTGGGTTAAGAATTCTTTTCTATTTACTATTGGTTTAATGTTGTTATTTTCTCTATTTGACGCGTATCACAACAAAAAAGGGCGCACTTTGGTGCGCCCTTTT 250 TTerm_0308 NC_003197.2 3420270 3420279 10 3420286 3420295 10 6 100 0 20 60 40 60 40 0 3420282 AAAACATGGC GCCATGTTTT True CGCCTCGCA CATATGTTT True True + AAAACATGGC TTAAGG GCCATGTTTT CATATGTTT 72 STM3250 intergenic 3420247 3420487 + down TCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACT GTTTAACCCCGCACCTGTGACCTGATCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACTTAATTCTGCTGCCTCATCAATTCTT TCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTT 48 TTerm_0309 NC_003197.2 3420270 3420279 10 3420286 3420295 10 6 100 0 20 60 40 60 40 0 3420282 AAAACATGGC GCCATGTTTT True CGCCTCGCA CATATGTTT True True + AAAACATGGC TTAAGG GCCATGTTTT CATATGTTT 72 STM3251 intergenic 3420247 3420487 - down AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGA AAGAATTGATGAGGCAGCAGAATTAAGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGATCAGGTCACAGGTGCGGGGTTAAAC TCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTT 48 TTerm_0310 NC_003197.2 3426654 3426663 10 3426668 3426677 10 4 90 0 15 15 85 11 88 0 3426665 CCGTGCCCGC GCGGGTACGG True TTGTTCCTC TTTTTCATG False True + CCGTGCCCGC TCCG GCGGGTACGG TTTTTCATG 70 STM3256 intergenic 3426638 3426824 + down CCTTCATTTGTTCCTCCGTGCCCGCTCCGGCGGGTACGGTTTTTCATGACAAAGTGAAGTTACAGACATTACACACCATTTCGTTACCTTACATTTCCTTTCGCAACTTTCATTTATCAGATCAAAATCACAAAACAACATTACGAAAGCCTATAAATTCTTTCGAAGAAGAAAAACGAAAGAACT TTGGCTATCTCGATTGTTTAATTAGCCTTCATTTGTTCCTCCGTGCCCGCTCCGGCGGGTACGGTTTTTCATGACAAAGTGAAGTTACAGACATTACACACCATTTCGTTACCTTACATTTCCTTTCGCAACTTTCATTTATCAGATCAAAATCACAAAACAACATTACGAAAGCCTATAAATTCTTTCGAAGAAGAAAAACGAAAGAACTCGGAGATAAAAGTGAAAGAAATAAT CCTTCATTTGTTCCTCCGTGCCCGCTCCGGCGGGTACGG 39 TTerm_0311 NC_003197.2 3453421 3453430 10 3453436 3453445 10 5 100 0 20 50 50 50 50 0 3453432 AAAAAGGGGC GCCCCTTTTT True TAAAGACAA AAATTTCTT True True + AAAAAGGGGC CATAA GCCCCTTTTT AAATTTCTT 80 STM3286 intergenic 3453410 3453617 - down ATCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGTTATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAGATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTTATGGCCCCTTTTTTGTCTTTATT TCGAGATCCAACGTACCATCGCTTAATCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGTTATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAGATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTTATGGCCCCTTTTTTGTCTTTATTCTGGAGAATTTATTATGGCGAAAGA AATAAAGACAAAAAAGGGGCCATAAGCCCCTTTTT 35 TTerm_0312 NC_003197.2 3460291 3460300 10 3460305 3460314 10 4 90 0 15 35 65 33 66 0 3460302 AACAGGCCGC GCGGCCTTTT True GTTGATGCA TTGTGAATA False True + AACAGGCCGC GAAA GCGGCCTTTT TTGTGAATA 78 STM3290 intergenic 3460273 3460359 + down GCCCGCGTCGTTGATGCAACAGGCCGCGAAAGCGGCCTTTTTTGTGAATATCACCCCAGGTTGATGCAAATGGCGGATTTGCCGGT GAATCTGGAAAACAAAGGCAAATAAGCCCGCGTCGTTGATGCAACAGGCCGCGAAAGCGGCCTTTTTTGTGAATATCACCCCAGGTTGATGCAAATGGCGGATTTGCCGGTTAATCTAACTGGACAACATTTCGCA GCCCGCGTCGTTGATGCAACAGGCCGCGAAAGCGGCCTTTT 41 TTerm_0313 NC_003197.2 3460291 3460300 10 3460305 3460314 10 4 90 0 15 35 65 33 66 0 3460302 AACAGGCCGC GCGGCCTTTT True GTTGATGCA TTGTGAATA False True + AACAGGCCGC GAAA GCGGCCTTTT TTGTGAATA 78 STM3291 intergenic 3460273 3460359 - down ACCGGCAAATCCGCCATTTGCATCAACCTGGGGTGATATTCACAAAAAAGGCCGCTTTCGCGGCCTGTTGCATCAACGACGCGGGC TGCGAAATGTTGTCCAGTTAGATTAACCGGCAAATCCGCCATTTGCATCAACCTGGGGTGATATTCACAAAAAAGGCCGCTTTCGCGGCCTGTTGCATCAACGACGCGGGCTTATTTGCCTTTGTTTTCCAGATTC GCCCGCGTCGTTGATGCAACAGGCCGCGAAAGCGGCCTTTT 41 TTerm_0314 NC_003197.2 3462377 3462384 8 3462389 3462396 8 4 100 0 16 25 75 25 75 0 3462386 AAGGCGGC GCCGCCTT True CGGGCCGTA TTTAGTCAC False True + AAGGCGGC AACC GCCGCCTT TTTAGTCAC 80 STM3294 intergenic 3462207 3462414 - down AGCGTTTAAGTGACTAAAAAGGCGGCGGTTGCCGCCTTACGGCCCGCAAAAAACAACGCTTTTGCTGTTTTTTTCCGCAGTTGATACAATGCGCTTAAATTGCCCTTGCGAAGGTCATTCGCTTTGGTTAGTATTCACACCCGCTTCAGTGGGAAACAGTAAAAATCCCGCTTTATTGGTAGAAGCATTGGTACGCGGCAACTCCGC TCGCGGATGCGGTAAAAGCCGTTTAAGCGTTTAAGTGACTAAAAAGGCGGCGGTTGCCGCCTTACGGCCCGCAAAAAACAACGCTTTTGCTGTTTTTTTCCGCAGTTGATACAATGCGCTTAAATTGCCCTTGCGAAGGTCATTCGCTTTGGTTAGTATTCACACCCGCTTCAGTGGGAAACAGTAAAAATCCCGCTTTATTGGTAGAAGCATTGGTACGCGGCAACTCCGCAAGGAACAGGTTGATTATGTACGAA GCGGAGTTGCCGCGTACCAATGCTTCTACCAATAAAGCGGGATTTTTACTGTTTCCCACTGAAGCGGGTGTGAATACTAACCAAAGCGAATGACCTTCGCAAGGGCAATTTAAGCGCATTGTATCAACTGCGGAAAAAAACAGCAAAAGCGTTGTTTTTTGCGGGCCGTAAGGCGGCAACCGCCGCCTT 189 TTerm_0315 NC_003197.2 3488090 3488111 22 3488121 3488142 22 9 77 0 19 79 20 82 17 0 3488115 AAAAACATTAAGAAAACCTTAA TTTAGGTTTTGTTTAAGTTCTT True CTATGCATA TGTCCATAC True True + AAAAACATTAAGAAAACCTTAA AAAATTTCG TTTAGGTTTTGTTTAAGTTCTT TGTCCATAC 54 STM3324 intergenic 3487938 3488176 + down ACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCC CAATTCCGGCTTTGACGAAGACTAAACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCCAGGACTTGCCATGATCCTCTTATCG ACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTT 204 TTerm_0316 NC_003197.2 3488153 3488160 8 3488165 3488172 8 4 100 0 16 100 0 100 0 0 3488162 AAATTTAT ATAAATTT True TCCATACTA TTCCAGGAC False True + AAATTTAT GTGA ATAAATTT TTCCAGGAC 32 STM3324 intergenic 3487938 3488176 + down ACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCC CAATTCCGGCTTTGACGAAGACTAAACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCCAGGACTTGCCATGATCCTCTTATCG ACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTT 234 TTerm_0317 NC_003197.2 3512355 3512365 11 3512370 3512380 11 4 100 0 22 54 45 54 45 0 3512367 AAAAAACCCGC GCGGGTTTTTT True TAGCCATAA CGCTAACAG True True + AAAAAACCCGC CGAA GCGGGTTTTTT CGCTAACAG 84 STM3344 intergenic 3512217 3512413 - down ATGGGGTTCTGCTTCGGCAGACAACTGTTAGCGAAAAAACCCGCTTCGGCGGGTTTTTTTATGGCTAAAGTCCGAATCCAGTCTCTTTTCCTCCCTATCTTTAGCATTATTCTCATCTTATTCATTTTTCATGCACGCTCAGAGAAAAGGAAGTCACAGTGGGATTTTTTAACTCATTGTTTACTAAGAAAGAGTC GTCGTCCGCAGTTCTCCAAACGTTAATGGGGTTCTGCTTCGGCAGACAACTGTTAGCGAAAAAACCCGCTTCGGCGGGTTTTTTTATGGCTAAAGTCCGAATCCAGTCTCTTTTCCTCCCTATCTTTAGCATTATTCTCATCTTATTCATTTTTCATGCACGCTCAGAGAAAAGGAAGTCACAGTGGGATTTTTTAACTCATTGTTTACTAAGAAAGAGTCGTTAATGCTGTCGAATAAATGGGAA GACTCTTTCTTAGTAAACAATGAGTTAAAAAATCCCACTGTGACTTCCTTTTCTCTGAGCGTGCATGAAAAATGAATAAGATGAGAATAATGCTAAAGATAGGGAGGAAAAGAGACTGGATTCGGACTTTAGCCATAAAAAAACCCGCCGAAGCGGGTTTTTT 163 TTerm_0318 NC_003197.2 3528776 3528788 13 3528793 3528805 13 4 76 0 11 76 23 80 20 0 3528790 GTATTAATTAATC GATTAGTGTATAC True TTAGCGTGG TTAATTTTG False True + GTATTAATTAATC GCGT GATTAGTGTATAC TTAATTTTG 38 STM3360 intergenic 3528505 3528858 + down TCCCACTTCCTCCGTCGTCGTACGGCGGAGGCACCTTTTTGTCCTCTCCCCTCGCCGCTTTCCTGTACGCCTATCATTTGGCAAATCATGCCCTTAAACATTCACCACATGAATGATAAATCAAAAAAACGCACAAAATGTCAAATTTATTAAGCAATTGATTTTCTTTTATTTTTTAAACGACAGCGGCGAAAAACAGCAATTTTAATTCCATAACGTTATAAAAAATAAAATTTTTAATGTTTTTAAAAAGCAGAAACAATTAGCGTGGTATTAATTAATCGCGTGATTAGTGTATACTTAATTTTGTGATGAGGGTCACGAAACAAAGTCCCCAGTAAAGGAATTCGACG GGAACTTTTTGAACAAGAGCTTTAGTCCCACTTCCTCCGTCGTCGTACGGCGGAGGCACCTTTTTGTCCTCTCCCCTCGCCGCTTTCCTGTACGCCTATCATTTGGCAAATCATGCCCTTAAACATTCACCACATGAATGATAAATCAAAAAAACGCACAAAATGTCAAATTTATTAAGCAATTGATTTTCTTTTATTTTTTAAACGACAGCGGCGAAAAACAGCAATTTTAATTCCATAACGTTATAAAAAATAAAATTTTTAATGTTTTTAAAAAGCAGAAACAATTAGCGTGGTATTAATTAATCGCGTGATTAGTGTATACTTAATTTTGTGATGAGGGTCACGAAACAAAGTCCCCAGTAAAGGAATTCGACGAGGTAAAAATCATGAAAATCAAAAC TCCCACTTCCTCCGTCGTCGTACGGCGGAGGCACCTTTTTGTCCTCTCCCCTCGCCGCTTTCCTGTACGCCTATCATTTGGCAAATCATGCCCTTAAACATTCACCACATGAATGATAAATCAAAAAAACGCACAAAATGTCAAATTTATTAAGCAATTGATTTTCTTTTATTTTTTAAACGACAGCGGCGAAAAACAGCAATTTTAATTCCATAACGTTATAAAAAATAAAATTTTTAATGTTTTTAAAAAGCAGAAACAATTAGCGTGGTATTAATTAATCGCGTGATTAGTGTATAC 300 TTerm_0319 NC_003197.2 3529530 3529536 7 3529542 3529548 7 5 100 0 14 0 100 0 100 0 3529538 GCCCCCG CGGGGGC True GACGACTTG TTTTTTATG False True + GCCCCCG CCTGC CGGGGGC TTTTTTATG 76 STM3362 intergenic 3529503 3529563 + down ACCCTCGTCGTCTAACCCGACGACTTGCCCCCGCCTGCCGGGGGCTTTTTTATGCTTTTT CGCCACCGCCGAGTTGTATAAGTAAACCCTCGTCGTCTAACCCGACGACTTGCCCCCGCCTGCCGGGGGCTTTTTTATGCTTTTTCAATGCCGGACATTAAACCGTAGCC ACCCTCGTCGTCTAACCCGACGACTTGCCCCCGCCTGCCGGGGGC 45 TTerm_0320 NC_003197.2 3529530 3529536 7 3529542 3529548 7 5 100 0 14 0 100 0 100 0 3529538 GCCCCCG CGGGGGC True GACGACTTG TTTTTTATG False True + GCCCCCG CCTGC CGGGGGC TTTTTTATG 76 STM3363 intergenic 3529503 3529563 - down AAAAAGCATAAAAAAGCCCCCGGCAGGCGGGGGCAAGTCGTCGGGTTAGACGACGAGGGT GGCTACGGTTTAATGTCCGGCATTGAAAAAGCATAAAAAAGCCCCCGGCAGGCGGGGGCAAGTCGTCGGGTTAGACGACGAGGGTTTACTTATACAACTCGGCGGTGGCG ACCCTCGTCGTCTAACCCGACGACTTGCCCCCGCCTGCCGGGGGC 45 TTerm_0321 NC_003197.2 3551948 3551957 10 3551963 3551972 10 5 100 0 20 40 60 40 60 0 3551959 AAAAGGCCGG CCGGCCTTTT True TTAATCTCA TTATTTCTG True True + AAAAGGCCGG TGAAT CCGGCCTTTT TTATTTCTG 88 STM3380 intergenic 3551932 3552029 + down TCGCACGTTAATCTCAAAAGGCCGGTGAATCCGGCCTTTTTTATTTCTGGGGATAGCGATGCCCCATCATGTACAATTCCCGCTTTCTTCACCCATA AAAACTCGGTCTTCAGGAAAAGTAATCGCACGTTAATCTCAAAAGGCCGGTGAATCCGGCCTTTTTTATTTCTGGGGATAGCGATGCCCCATCATGTACAATTCCCGCTTTCTTCACCCATAAGGGACAAAAAATGGACGCTCGTTT TCGCACGTTAATCTCAAAAGGCCGGTGAATCCGGCCTTTT 40 TTerm_0322 NC_003197.2 3565405 3565411 7 3565416 3565422 7 4 100 0 14 28 71 28 71 0 3565413 AGGCGTC GACGCCT True GTAAACAGA TTTTAAACG False True + AGGCGTC TTCG GACGCCT TTTTAAACG 68 STM3391 intergenic 3565393 3565618 + down CCGGTAAACAGAGGCGTCTTCGGACGCCTTTTTAAACGGTACGTCTTTATCTCCGCTATTCCCCCTCTCCGCTTACCTCTGCATTCTCCATAGTTTTTACAATTCACATGAATTGAGATGATTCCTCATGTCGGCCATTTTTTCTGTGGTGGTAAAATAACTCTCGTTTTCGCAGCGGTTAGAGCCAGCATTACGTTGCTGTACTTCGCGAAACGCTGATTAATG CCGATTTAATCGCCATCATGATTAACCGGTAAACAGAGGCGTCTTCGGACGCCTTTTTAAACGGTACGTCTTTATCTCCGCTATTCCCCCTCTCCGCTTACCTCTGCATTCTCCATAGTTTTTACAATTCACATGAATTGAGATGATTCCTCATGTCGGCCATTTTTTCTGTGGTGGTAAAATAACTCTCGTTTTCGCAGCGGTTAGAGCCAGCATTACGTTGCTGTACTTCGCGAAACGCTGATTAATGAGGTAACACCATGAAAAGACTAATT CCGGTAAACAGAGGCGTCTTCGGACGCCT 29 TTerm_0323 NC_003197.2 3570200 3570217 18 3570222 3570239 18 4 88 0 26 69 30 75 25 0 3570219 AATATCTCAAACGTGACT AGTCAGTTTTGAGATATT True AAAGAGCAA AAGGCAGGT False True + AATATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATATT AAGGCAGGT 76 STM3397 intergenic 3570078 3570314 - down CCAGCGTTCAAACTGATGAGGTCAAACCTCCAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG AGGGGTTCGAATCCCCTAGGGGACGCCAGCGTTCAAACTGATGAGGTCAAACCTCCAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACGTGACTCGTAAGTCAGTTTTGAGATATT 161 TTerm_0324 NC_003197.2 3570399 3570407 9 3570412 3570420 9 4 88 0 13 61 38 62 37 0 3570409 AATCGCAAG CTTGCTATT True GAAGTCTCA CACTTTTCA False True + AATCGCAAG ACGC CTTGCTATT CACTTTTCA 50 STM3398 intergenic 3570386 3570470 - down TTAAAGAAGCGTACTTTGAAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAGGCGTCTTGCGATTGAGACTTCAGTG CCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGAAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAGGCGTCTTGCGATTGAGACTTCAGTGTCCCCTTCGTCTAGAGGCCCAGGAC CACTGAAGTCTCAATCGCAAGACGCCTTGCTATT 34 TTerm_0325 NC_003197.2 3581158 3581167 10 3581173 3581182 10 5 90 0 15 35 65 33 66 0 3581169 AAGGGGCGCT AGCGCCCTTT True TCTAATTTA TTAATTCCC False True + AAGGGGCGCT CATTC AGCGCCCTTT TTAATTCCC 70 STM3409 intergenic 3581154 3581282 + down TTTAAGGGGCGCTCATTCAGCGCCCTTTTTAATTCCCTTTATTTATCAAGGTTTAATTTATTTCGCTAAACAGAAGCCGTAAATGGAAAATGCCTTAGCATTTGTTAAACTTATAACGTCAGCTGCAT CCAGCCAAGTCCTTTCTTCCTCTAATTTAAGGGGCGCTCATTCAGCGCCCTTTTTAATTCCCTTTATTTATCAAGGTTTAATTTATTTCGCTAAACAGAAGCCGTAAATGGAAAATGCCTTAGCATTTGTTAAACTTATAACGTCAGCTGCATAGGGAGAATAAAAATGAGTTTTATT TTTAAGGGGCGCTCATTCAGCGCCCTTT 28 TTerm_0326 NC_003197.2 3582842 3582854 13 3582859 3582871 13 4 100 0 26 61 38 61 38 0 3582856 TAAAAAAACCCGC GCGGGTTTTTTTA True GGAGGGTAT CGTTACTAC True True + TAAAAAAACCCGC CGAA GCGGGTTTTTTTA CGTTACTAC 92 STM3414 intergenic 3582788 3582884 - down ATCTGTAGTAACGTAAAAAAACCCGCTTCGGCGGGTTTTTTTATACCCTCCTGAACCCCACATATCTACAATAATTGTATTCTTTTCGTTCAATCC AGAAAACAGAAGCTGCTGCAGAGTAATCTGTAGTAACGTAAAAAAACCCGCTTCGGCGGGTTTTTTTATACCCTCCTGAACCCCACATATCTACAATAATTGTATTCTTTTCGTTCAATCCCTGGAGCGACGTATGTGGTTACTTG GGATTGAACGAAAAGAATACAATTATTGTAGATATGTGGGGTTCAGGAGGGTATAAAAAAACCCGCCGAAGCGGGTTTTTTTA 83 TTerm_0327 NC_003197.2 3602764 3602771 8 3602779 3602786 8 7 87 0 11 31 68 28 71 0 3602774 CGCCCTCA TGAGGACG True TAATAAAAC CCGAATTTT True True + CGCCCTCA CACAATA TGAGGACG CCGAATTTT 46 STM3449 intergenic 3602729 3602842 - down ATGGCGGGATCGTTGTATATTTCTTGACACCTTTTCGACACCGCCCTAAAATTCGGCGTCCTCATATTGTGTGAGGGCGTTTTATTACGTGTTTACGAAGCAAAAGCTAAAAC AGTATGCCAACCAGATGGCCTGGTGATGGCGGGATCGTTGTATATTTCTTGACACCTTTTCGACACCGCCCTAAAATTCGGCGTCCTCATATTGTGTGAGGGCGTTTTATTACGTGTTTACGAAGCAAAAGCTAAAACCAGGAGCTATTTAATGGCAACAGTT GTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGCCCTCACACAATATGAGGACG 57 TTerm_0328 NC_003197.2 3606139 3606150 12 3606156 3606167 12 5 100 0 24 58 41 58 41 0 3606152 AAAAAAAGCGGG CCCGCTTTTTTT True TTGAGACGA GTGCCCGAT True True + AAAAAAAGCGGG GTTAA CCCGCTTTTTTT GTGCCCGAT 88 STM3454 intergenic 3606134 3606322 + down GACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGAT AGAAACGCCGCCGCCGCATTATTGAGACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGATTAATGGCAGCCGCAGCCGCCTTTAC GACGAAAAAAAGCGGGGTTAACCCGCTTTTTTT 33 TTerm_0329 NC_003197.2 3606139 3606150 12 3606156 3606167 12 5 100 0 24 58 41 58 41 0 3606152 AAAAAAAGCGGG CCCGCTTTTTTT True TTGAGACGA GTGCCCGAT True True + AAAAAAAGCGGG GTTAA CCCGCTTTTTTT GTGCCCGAT 88 STM3455 intergenic 3606134 3606322 - down ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTC GTAAAGGCGGCTGCGGCTGCCATTAATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTCTCAATAATGCGGCGGCGGCGTTTCT GACGAAAAAAAGCGGGGTTAACCCGCTTTTTTT 33 TTerm_0330 NC_003197.2 3611746 3611754 9 3611761 3611769 9 6 88 0 13 61 38 62 37 0 3611757 AAGAGCCTA TAGGCTATT True GAACGACTA TTATTCGCC False True + AAGAGCCTA TCCCAT TAGGCTATT TTATTCGCC 50 STM3459 intergenic 3611747 3611815 + down GAGCCTATCCCATTAGGCTATTTTATTCGCCATTTTAGGGCCGGGCAGTGCTCGAAATCCTCACGTAC TGAGCAGATGATGCAGAACGACTAAGAGCCTATCCCATTAGGCTATTTTATTCGCCATTTTAGGGCCGGGCAGTGCTCGAAATCCTCACGTACTATGTGTACGCTCCGGTTTCTGCGC GAGCCTATCCCATTAGGCTATT 22 TTerm_0331 NC_003197.2 3611746 3611754 9 3611761 3611769 9 6 88 0 13 61 38 62 37 0 3611757 AAGAGCCTA TAGGCTATT True GAACGACTA TTATTCGCC False True + AAGAGCCTA TCCCAT TAGGCTATT TTATTCGCC 50 STM3460 intergenic 3611747 3611815 - down GTACGTGAGGATTTCGAGCACTGCCCGGCCCTAAAATGGCGAATAAAATAGCCTAATGGGATAGGCTC GCGCAGAAACCGGAGCGTACACATAGTACGTGAGGATTTCGAGCACTGCCCGGCCCTAAAATGGCGAATAAAATAGCCTAATGGGATAGGCTCTTAGTCGTTCTGCATCATCTGCTCA GAGCCTATCCCATTAGGCTATT 22 TTerm_0332 NC_003197.2 3628851 3628865 15 3628871 3628885 15 5 93 0 25 63 36 64 35 0 3628867 TAAAATAACGCCCTG CAGGGCTTTATTTTA True TCATTAATT CAACTACTC True True + TAAAATAACGCCCTG TTATT CAGGGCTTTATTTTA CAACTACTC 90 STM3477 intergenic 3628849 3629155 + down TTAAAATAACGCCCTGTTATTCAGGGCTTTATTTTACAACTACTCGTAATCTCAAATTATTTTTACTTAAAAGTGAATTAAGAAACTAACTTTAAATACACCGGACAAATTTAAATAATAATTCTGCCTAAAAACCCTTTTACTCGTCAAATTCACCTCTTATTCATTCATACAATAAATAACACCGTTAAGCACTCAATTTGACCTGACCTGGTTATCGGGTGATAAAATAAACACTAAAGCATAATTTTTCTTCTGGCCATTTCATCATTGCCTGTACCGCTCTCTGCATATGTTTAGTACGCA ATTAAATTGGTTCTCTAATCATTAATTAAAATAACGCCCTGTTATTCAGGGCTTTATTTTACAACTACTCGTAATCTCAAATTATTTTTACTTAAAAGTGAATTAAGAAACTAACTTTAAATACACCGGACAAATTTAAATAATAATTCTGCCTAAAAACCCTTTTACTCGTCAAATTCACCTCTTATTCATTCATACAATAAATAACACCGTTAAGCACTCAATTTGACCTGACCTGGTTATCGGGTGATAAAATAAACACTAAAGCATAATTTTTCTTCTGGCCATTTCATCATTGCCTGTACCGCTCTCTGCATATGTTTAGTACGCAAGGAAAATATTAATTAAGGATGAAC TTAAAATAACGCCCTGTTATTCAGGGCTTTATTTTA 36 TTerm_0333 NC_003197.2 3649216 3649226 11 3649231 3649241 11 4 100 0 22 54 45 54 45 0 3649228 AAAAAAGGCGC GCGCCTTTTTT True TTCTGATCA ATTGTGTTT True True + AAAAAAGGCGC TCCG GCGCCTTTTTT ATTGTGTTT 84 STM3493 intergenic 3649213 3649309 + down TCAAAAAAGGCGCTCCGGCGCCTTTTTTATTGTGTTTAGCGGATGACGGCGAACGGGGAGACAAACTTTCCGTTGGCTTGATCAACGCCGCGCCAT TGGTGAAACACACGAACTGTTCTGATCAAAAAAGGCGCTCCGGCGCCTTTTTTATTGTGTTTAGCGGATGACGGCGAACGGGGAGACAAACTTTCCGTTGGCTTGATCAACGCCGCGCCATCAGGCAATTCGGCCCTGCGCTTTCA TCAAAAAAGGCGCTCCGGCGCCTTTTTT 28 TTerm_0334 NC_003197.2 3649216 3649226 11 3649231 3649241 11 4 100 0 22 54 45 54 45 0 3649228 AAAAAAGGCGC GCGCCTTTTTT True TTCTGATCA ATTGTGTTT True True + AAAAAAGGCGC TCCG GCGCCTTTTTT ATTGTGTTT 84 STM3494 intergenic 3649213 3649309 - down ATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTTTGA TGAAAGCGCAGGGCCGAATTGCCTGATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTTTGATCAGAACAGTTCGTGTGTTTCACCA TCAAAAAAGGCGCTCCGGCGCCTTTTTT 28 TTerm_0335 NC_003197.2 3690260 3690266 7 3690271 3690277 7 4 100 0 14 14 85 14 85 0 3690268 GGGCGGT ACCGCCC True AAAATCCGG TTTTCGCCA True True + GGGCGGT TTAT ACCGCCC TTTTCGCCA 68 STM3526 intergenic 3690250 3690297 + down TAAAATCCGGGGCGGTTTATACCGCCCTTTTCGCCACATACCGCATT ACACCAACTTTCAATGGCGTCGTAATAAAATCCGGGGCGGTTTATACCGCCCTTTTCGCCACATACCGCATTCACTCGCCGGGTTTTGTACAGCCGG TAAAATCCGGGGCGGTTTATACCGCCC 27 TTerm_0336 NC_003197.2 3690260 3690266 7 3690271 3690277 7 4 100 0 14 14 85 14 85 0 3690268 GGGCGGT ACCGCCC True AAAATCCGG TTTTCGCCA True True + GGGCGGT TTAT ACCGCCC TTTTCGCCA 68 STM3527 intergenic 3690250 3690297 - down AATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCCCCGGATTTTA CCGGCTGTACAAAACCCGGCGAGTGAATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCCCCGGATTTTATTACGACGCCATTGAAAGTTGGTGT TAAAATCCGGGGCGGTTTATACCGCCC 27 TTerm_0337 NC_003197.2 3697959 3697965 7 3697971 3697977 7 5 100 0 14 14 85 14 85 0 3697967 AGCGGGC GCCCGCT True ATGACGAAA ATGTCTTTT False True + AGCGGGC TTCTT GCCCGCT ATGTCTTTT 76 STM3532 intergenic 3697947 3697991 + down GCGATGACGAAAGCGGGCTTCTTGCCCGCTATGTCTTTTTATTT GATCTTACAGCGTGCGGGACTTTAAGCGATGACGAAAGCGGGCTTCTTGCCCGCTATGTCTTTTTATTTCAGCACATCAGACGCGTCAGGCTAC GCGATGACGAAAGCGGGCTTCTTGCCCGCT 30 TTerm_0338 NC_003197.2 3697959 3697965 7 3697971 3697977 7 5 100 0 14 14 85 14 85 0 3697967 AGCGGGC GCCCGCT True ATGACGAAA ATGTCTTTT False True + AGCGGGC TTCTT GCCCGCT ATGTCTTTT 76 STM3533 intergenic 3697947 3697991 - down AAATAAAAAGACATAGCGGGCAAGAAGCCCGCTTTCGTCATCGC GTAGCCTGACGCGTCTGATGTGCTGAAATAAAAAGACATAGCGGGCAAGAAGCCCGCTTTCGTCATCGCTTAAAGTCCCGCACGCTGTAAGATC GCGATGACGAAAGCGGGCTTCTTGCCCGCT 30 TTerm_0339 NC_003197.2 3716262 3716270 9 3716278 3716286 9 7 88 0 13 88 11 87 12 0 3716273 GTAATTTTA TAATATTAC True TTTTTTCCG ATTTTTGTT False True + GTAATTTTA GCAATAT TAATATTAC ATTTTTGTT 26 STM3546 intergenic 3716117 3716376 + down CGCTTCCCCGCCCCACCCTGTGGGGCGAAACGTCACAAACCTTCACAACATTCCAGTTATTGCAACCTACTTCCCCTATATCAAAACAATAACCATCTGAATTTCATGGTTATTACCACTTTAAGCTTTATCACCGTTTTTTCCGTAATTTTAGCAATATTAATATTACATTTTTGTTTTTTTTTGGTTTCTGCCATCACTTTATGGTGACAATCACAACAATATACTCCTCCCGGGACTAATTTAACCACGGTGAGGT GTACTTTATGGCGCGCGTGAAATAACGCTTCCCCGCCCCACCCTGTGGGGCGAAACGTCACAAACCTTCACAACATTCCAGTTATTGCAACCTACTTCCCCTATATCAAAACAATAACCATCTGAATTTCATGGTTATTACCACTTTAAGCTTTATCACCGTTTTTTCCGTAATTTTAGCAATATTAATATTACATTTTTGTTTTTTTTTGGTTTCTGCCATCACTTTATGGTGACAATCACAACAATATACTCCTCCCGGGACTAATTTAACCACGGTGAGGTAAAAAATGAAATTTGAACGCCATCA CGCTTCCCCGCCCCACCCTGTGGGGCGAAACGTCACAAACCTTCACAACATTCCAGTTATTGCAACCTACTTCCCCTATATCAAAACAATAACCATCTGAATTTCATGGTTATTACCACTTTAAGCTTTATCACCGTTTTTTCCGTAATTTTAGCAATATTAATATTAC 169 TTerm_0340 NC_003197.2 3718379 3718389 11 3718394 3718404 11 4 90 0 17 63 36 60 40 0 3718391 AATGGAGTAAC GTTACTCCTTT True TAAAAAACA TATAAAATA True True + AATGGAGTAAC GAAA GTTACTCCTTT TATAAAATA 50 STM3548 intergenic 3718373 3718421 + down AAAACAATGGAGTAACGAAAGTTACTCCTTTTATAAAATATAAGGATT GCTTCAATTCATCGCCAGAAAATAAAAAACAATGGAGTAACGAAAGTTACTCCTTTTATAAAATATAAGGATTGATGTATGAACAAGAATAAGTACTC AAAACAATGGAGTAACGAAAGTTACTCCTTT 31 TTerm_0341 NC_003197.2 3760112 3760121 10 3760126 3760135 10 4 90 0 15 25 75 22 77 0 3760123 AGCGGGTCAG CTGGCCCGCT True CTAATACGA TTTTTTATT False True + AGCGGGTCAG GAAA CTGGCCCGCT TTTTTTATT 70 STM3589 intergenic 3760004 3760144 + down GCCAAATGGGCCGGATAGCGCTGTCGCTAATCCGGCCTGTCAGGATGAAACGACACAGGCCTGATAGGCCGCTATAAGCGGCGTCATCCGGAGGCTTATCTAATACGAGCGGGTCAGGAAACTGGCCCGCTTTTTTTATT CTGGCTTTCCCTGAAGATTATTTAAGCCAAATGGGCCGGATAGCGCTGTCGCTAATCCGGCCTGTCAGGATGAAACGACACAGGCCTGATAGGCCGCTATAAGCGGCGTCATCCGGAGGCTTATCTAATACGAGCGGGTCAGGAAACTGGCCCGCTTTTTTTATTCAGTGCCAAATCATGAGCGCAATCA GCCAAATGGGCCGGATAGCGCTGTCGCTAATCCGGCCTGTCAGGATGAAACGACACAGGCCTGATAGGCCGCTATAAGCGGCGTCATCCGGAGGCTTATCTAATACGAGCGGGTCAGGAAACTGGCCCGCT 131 TTerm_0342 NC_003197.2 3760112 3760121 10 3760126 3760135 10 4 90 0 15 25 75 22 77 0 3760123 AGCGGGTCAG CTGGCCCGCT True CTAATACGA TTTTTTATT False True + AGCGGGTCAG GAAA CTGGCCCGCT TTTTTTATT 70 STM3590 intergenic 3760004 3760144 - down AATAAAAAAAGCGGGCCAGTTTCCTGACCCGCTCGTATTAGATAAGCCTCCGGATGACGCCGCTTATAGCGGCCTATCAGGCCTGTGTCGTTTCATCCTGACAGGCCGGATTAGCGACAGCGCTATCCGGCCCATTTGGC TGATTGCGCTCATGATTTGGCACTGAATAAAAAAAGCGGGCCAGTTTCCTGACCCGCTCGTATTAGATAAGCCTCCGGATGACGCCGCTTATAGCGGCCTATCAGGCCTGTGTCGTTTCATCCTGACAGGCCGGATTAGCGACAGCGCTATCCGGCCCATTTGGCTTAAATAATCTTCAGGGAAAGCCAG GCCAAATGGGCCGGATAGCGCTGTCGCTAATCCGGCCTGTCAGGATGAAACGACACAGGCCTGATAGGCCGCTATAAGCGGCGTCATCCGGAGGCTTATCTAATACGAGCGGGTCAGGAAACTGGCCCGCT 131 TTerm_0343 NC_003197.2 3761386 3761401 16 3761410 3761424 15 8 87 6 15 54 45 57 42 0 3761405 ATCAACAACAACGCCC GGGCGTTTTGTTTAT True TTCCGGCTA CCCCCCTTC False True + ATCAACAACAACGCCC GCTTATGT GGGCGTTTTGTTTAT CCCCCCTTC 70 STM3591 intergenic 3761301 3761619 + down TACTTGCCGTGCCGGCTGGCGGCTAAGACCGCGTCTGGTCTATAGTCAATCAGGTTGGCCTGAACCATCAGGCAAATTCCGGCTATCAACAACAACGCCCGCTTATGTGGGCGTTTTGTTTATCCCCCCTTCTTCGCAGTACTCAGTACATCATTCCATCACACCAAACATAATTAGTGTGATCCACTAATTAGTTTGCGTATCATTTGTATAATAACCTATTGATCAGGCTAATAACCGCAGTCTATATCAGGGTAAGTCTTTTCGGCGCGTTTTGATATACGCGCTCATACGTTTCGGGATGGCATTAAAAGGCGA GCCGCTGCGCGACGAAGAAGAGTAATACTTGCCGTGCCGGCTGGCGGCTAAGACCGCGTCTGGTCTATAGTCAATCAGGTTGGCCTGAACCATCAGGCAAATTCCGGCTATCAACAACAACGCCCGCTTATGTGGGCGTTTTGTTTATCCCCCCTTCTTCGCAGTACTCAGTACATCATTCCATCACACCAAACATAATTAGTGTGATCCACTAATTAGTTTGCGTATCATTTGTATAATAACCTATTGATCAGGCTAATAACCGCAGTCTATATCAGGGTAAGTCTTTTCGGCGCGTTTTGATATACGCGCTCATACGTTTCGGGATGGCATTAAAAGGCGAAGGAATATGAATACAACTGCACCTA TACTTGCCGTGCCGGCTGGCGGCTAAGACCGCGTCTGGTCTATAGTCAATCAGGTTGGCCTGAACCATCAGGCAAATTCCGGCTATCAACAACAACGCCCGCTTATGTGGGCGTTTTGTTTAT 123 TTerm_0344 NC_003197.2 3808366 3808384 19 3808389 3808407 19 4 73 0 13 31 68 28 71 0 3808386 CCCCGTCAGGTTGCCAGGT ACCAGTCAACGTGCGGGGG True AAGTTAGCC TTTTCTCTA False True + CCCCGTCAGGTTGCCAGGT TTAT ACCAGTCAACGTGCGGGGG TTTTCTCTA 50 STM3624 intergenic 3808111 3808685 + down ACCGAAAAAGGCCGCAAGGTTTCCCCTGCGGCCTGGTTCGGGCGCATGTTGCCATTACGGCGGACAGACGCTCAAAACGCGTTACTTCCTGTCACGTAGCCAGTTGACGATCACACTGGCGATAATGCCAGCAATGATCGGCGCTGCCAGATCGTGCCAGAAGACCACGCCCAACTGCGTAAGCGTCATATAGCCGCCTTGTTGCAATGGCAACCGTTCGCGGCTATCCTTAAAGTGTTTGGGTTCAAGTTAGCCCCCGTCAGGTTGCCAGGTTTATACCAGTCAACGTGCGGGGGTTTTCTCTATCCAGCAACCTATGCCGCCGGGGATCAAACCCCCGCAACATTGCGCCTCACCGGGTAAACCCGGCTTGCTGCTGATATTACGGCAAAATCCCCGTCCCGGCACGGCGCTAACGTGCAATCTGCGTGACGCTTCGCAGACGATTACTTTTATTTGCCAGAATACATTCAGCATTTCTGAGGCTGGCAGTCAGCCGCTCAATTCTGTAAATTATGCCTCCTCGCGGCCAGTCCCGGTGATACCGAAACCCTCGTTCAGCATCCTGCGTCTA ACCGAAAAAGGCCGCAAGGTTTCCCCTGCGGCCTGGTTCGGGCGCATGTTGCCATTACGGCGGACAGACGCTCAAAACGCGTTACTTCCTGTCACGTAGCCAGTTGACGATCACACTGGCGATAATGCCAGCAATGATCGGCGCTGCCAGATCGTGCCAGAAGACCACGCCCAACTGCGTAAGCGTCATATAGCCGCCTTGTTGCAATGGCAACCGTTCGCGGCTATCCTTAAAGTGTTTGGGTTCAAGTTAGCCCCCGTCAGGTTGCCAGGTTTATACCAGTCAACGTGCGGGGG 296 TTerm_0345 NC_003197.2 3836184 3836192 9 3836198 3836206 9 5 100 0 18 44 55 44 55 0 3836194 AACGGTCCT AGGACCGTT True CTGTTTTTA TTCCCCGCC False True + AACGGTCCT GCGTA AGGACCGTT TTCCCCGCC 68 STM3648 intergenic 3836162 3836438 + down TTTTTACCCCTTTCTGTTTTTAACGGTCCTGCGTAAGGACCGTTTTCCCCGCCCGATTACTGGCCTGGAGAAATAAAGTAAAATAAAAGTTGCATCGCCCGCCATTACATGAGTTAATGTGCTCAACGGTTTGACGTACAGACCATTAAAGCAGTTTAGTAAGGCAAGTCCCTTCAAGAGTTATCCATTAGATACCCCTCGTAGTGCGCATTTCCTTAACGCTTAAAAAATCTGTAAAGCACGCCATAACGCCGAAAGGCACACTTATTTTTTAAA CTTAAGTAAGCAATTGATGGAGTAATTTTTACCCCTTTCTGTTTTTAACGGTCCTGCGTAAGGACCGTTTTCCCCGCCCGATTACTGGCCTGGAGAAATAAAGTAAAATAAAAGTTGCATCGCCCGCCATTACATGAGTTAATGTGCTCAACGGTTTGACGTACAGACCATTAAAGCAGTTTAGTAAGGCAAGTCCCTTCAAGAGTTATCCATTAGATACCCCTCGTAGTGCGCATTTCCTTAACGCTTAAAAAATCTGTAAAGCACGCCATAACGCCGAAAGGCACACTTATTTTTTAAAAGGTAATACACTATGTCCGGTAAAA TTTTTACCCCTTTCTGTTTTTAACGGTCCTGCGTAAGGACCGTT 44 TTerm_0346 NC_003197.2 3836686 3836695 10 3836700 3836709 10 4 90 0 15 35 65 33 66 0 3836697 AATCCCTGCC GGCGGGGATT True GCATTTTGA TTTTTTATT False True + AATCCCTGCC TGAT GGCGGGGATT TTTTTTATT 78 STM3649 intergenic 3836663 3836830 + down GCTTAAAAAGCTCAGCATTTTGAATCCCTGCCTGATGGCGGGGATTTTTTTTATTCCAATTCCCCCCTCTCCCCCAGCATAACTTTGCATTACTTTACCCTGCGTCCCTTTGACCTTTCCCTTAGGGGAACCCCTATAGTAGGCAGGGAGATTGTTCACAAGGAATT AGCTGGCAACGTAACCAGCCTGTAAGCTTAAAAAGCTCAGCATTTTGAATCCCTGCCTGATGGCGGGGATTTTTTTTATTCCAATTCCCCCCTCTCCCCCAGCATAACTTTGCATTACTTTACCCTGCGTCCCTTTGACCTTTCCCTTAGGGGAACCCCTATAGTAGGCAGGGAGATTGTTCACAAGGAATTGAAGTTATGTCGAAATCATCATGGT GCTTAAAAAGCTCAGCATTTTGAATCCCTGCCTGATGGCGGGGATT 46 TTerm_0347 NC_003197.2 3839738 3839747 10 3839754 3839763 10 6 100 0 20 60 40 60 40 0 3839750 AAAAACCTGC GCAGGTTTTT True TGTTATAAA GTTTATTTA True True + AAAAACCTGC CCGAGA GCAGGTTTTT GTTTATTTA 72 STM3655 intergenic 3839630 3839782 - down AGCGTTCAGTTAAATAAACAAAAACCTGCTCTCGGGCAGGTTTTTTTATAACATAAATAGTATTAGTTGATTCGCTAATAATTCTGTAACTCATAGACGCGGTTATCTCTATTGATTGGCAAGAATTATTTCAGGAATACATTAACGCTGGC TTGCGGATATTTCGTTACTTCAATAAGCGTTCAGTTAAATAAACAAAAACCTGCTCTCGGGCAGGTTTTTTTATAACATAAATAGTATTAGTTGATTCGCTAATAATTCTGTAACTCATAGACGCGGTTATCTCTATTGATTGGCAAGAATTATTTCAGGAATACATTAACGCTGGCGGTACTGCCAGACTTGATGCGGGTA GCCAGCGTTAATGTATTCCTGAAATAATTCTTGCCAATCAATAGAGATAACCGCGTCTATGAGTTACAGAATTATTAGCGAATCAACTAATACTATTTATGTTATAAAAAAACCTGCCCGAGAGCAGGTTTTT 133 TTerm_0348 NC_003197.2 3870767 3870783 17 3870791 3870807 17 7 94 0 29 64 35 62 37 0 3870786 ATAAAAAGCACATCTGG CCTGATGTGCTTTTTAT True CCAGAAAAA AAAGCAACG True True + ATAAAAAGCACATCTGG TTCATTT CCTGATGTGCTTTTTAT AAAGCAACG 82 STM3681 intergenic 3870573 3870858 + down CGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTATAAAGCAACGCAATAATTGTATTGCTTCATTTGTTATTTAATTTAACCATTT GCAGCAAAAGCTCGACCGAGGCTAACGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTATAAAGCAACGCAATAATTGTATTGCTTCATTTGTTATTTAATTTAACCATTTCATTCTTTTTGCGGAAATAATAACG CGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTAT 234 TTerm_0349 NC_003197.2 3870767 3870783 17 3870791 3870807 17 7 94 0 29 64 35 62 37 0 3870786 ATAAAAAGCACATCTGG CCTGATGTGCTTTTTAT True CCAGAAAAA AAAGCAACG True True + ATAAAAAGCACATCTGG TTCATTT CCTGATGTGCTTTTTAT AAAGCAACG 82 STM3682 intergenic 3870573 3870858 - down AAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTATTTTTCTGGCTTCTTAAAATAGCCAGCGTGAACCTGTTATCAGGATAATTTCACCCGTATTCTTTGCGCCTTATTCAGGCGACTCACGATGAGATTGTGGAACTTTATCGCACGGCGATGTAACGCCTTTGCCCGGTGGCGCGGACGCTTACCGGGCCTGCGTAGACAATGCAGGCCGGATAAGGCGTAACACG CGTTATTATTTCCGCAAAAAGAATGAAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTATTTTTCTGGCTTCTTAAAATAGCCAGCGTGAACCTGTTATCAGGATAATTTCACCCGTATTCTTTGCGCCTTATTCAGGCGACTCACGATGAGATTGTGGAACTTTATCGCACGGCGATGTAACGCCTTTGCCCGGTGGCGCGGACGCTTACCGGGCCTGCGTAGACAATGCAGGCCGGATAAGGCGTAACACGTTAGCCTCGGTCGAGCTTTTGCTGC CGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTAT 234 TTerm_0350 NC_003197.2 3902614 3902623 10 3902633 3902642 10 9 100 0 20 60 40 60 40 0 3902627 AAAAGGTTGG CCAACCTTTT True CCTAACAAA ACGATGAAA True True + AAAAGGTTGG CGAATGACA CCAACCTTTT ACGATGAAA 72 STM3708 intergenic 3902412 3902894 - down ATATGTATATACCCAAAATAATTCGAGTTGCTTAAAGGCGGCAAGGGAGTGAGTCCCCAGGAGCATAGATAACTATATGACTGGGGTGAACGACAAATCTGCCGGGAGCAGATTTGAACGTCGCTTGCGACGGCCCGTCAGGGCGAGGCCCATGGATGGGCCGAGTAATCCGTAGCCAACACATAAGCAACTTGAAGTATGAAGGGTATAGAGACCCGATAATTTTATCGGGTCTGATATACGTTTCATCGTAAAAGGTTGGTGTCATTCGCCAACCTTTTTTGTTAGGGAAAATCTGGAAAGCCGTAAAGAATTGTCATAGACATCAAGCATTCGTAATTGCGCTTTACTCTTATTTTACTCGCTAACGTCACGCTCTACTCTGAGTTTTGTGCTTGCTTTTTACTGTAAAAATTAATTATGGCGGCTTAATAGTTTCTTAATAGAGCCACAGTATAAAGGCAGGGTAAATTAAGGTTTTT GAAAAGTTATTCTGAGCTGGGATTAATATGTATATACCCAAAATAATTCGAGTTGCTTAAAGGCGGCAAGGGAGTGAGTCCCCAGGAGCATAGATAACTATATGACTGGGGTGAACGACAAATCTGCCGGGAGCAGATTTGAACGTCGCTTGCGACGGCCCGTCAGGGCGAGGCCCATGGATGGGCCGAGTAATCCGTAGCCAACACATAAGCAACTTGAAGTATGAAGGGTATAGAGACCCGATAATTTTATCGGGTCTGATATACGTTTCATCGTAAAAGGTTGGTGTCATTCGCCAACCTTTTTTGTTAGGGAAAATCTGGAAAGCCGTAAAGAATTGTCATAGACATCAAGCATTCGTAATTGCGCTTTACTCTTATTTTACTCGCTAACGTCACGCTCTACTCTGAGTTTTGTGCTTGCTTTTTACTGTAAAAATTAATTATGGCGGCTTAATAGTTTCTTAATAGAGCCACAGTATAAAGGCAGGGTAAATTAAGGTTTTTCTGGTAATCGTTATGAAAAATAGTA AAAAACCTTAATTTACCCTGCCTTTATACTGTGGCTCTATTAAGAAACTATTAAGCCGCCATAATTAATTTTTACAGTAAAAAGCAAGCACAAAACTCAGAGTAGAGCGTGACGTTAGCGAGTAAAATAAGAGTAAAGCGCAATTACGAATGCTTGATGTCTATGACAATTCTTTACGGCTTTCCAGATTTTCCCTAACAAAAAAGGTTGGCGAATGACACCAACCTTTT 230 TTerm_0351 NC_003197.2 3909518 3909532 15 3909541 3909555 15 8 100 0 30 53 46 53 46 0 3909536 AAAACGCGCTGATAC GTATCAGCGCGTTTT True TAGATAAAA CCATCATCA True True + AAAACGCGCTGATAC TTATTACG GTATCAGCGCGTTTT CCATCATCA 76 STM3713 intergenic 3909516 3909573 + down AAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTTCCATCATCAGGACTCAAT TCTGCTGGCGCTAAGAAATAGATAAAAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTTCCATCATCAGGACTCAATCACTTATCAAACCAGTTTTTCATTT AAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTT 39 TTerm_0352 NC_003197.2 3909518 3909532 15 3909541 3909555 15 8 100 0 30 53 46 53 46 0 3909536 AAAACGCGCTGATAC GTATCAGCGCGTTTT True TAGATAAAA CCATCATCA True True + AAAACGCGCTGATAC TTATTACG GTATCAGCGCGTTTT CCATCATCA 76 STM3714 intergenic 3909516 3909573 - down ATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTTTT AAATGAAAAACTGGTTTGATAAGTGATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTTTTTTATCTATTTCTTAGCGCCAGCAGA AAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTT 39 TTerm_0353 NC_003197.2 3922006 3922016 11 3922021 3922031 11 4 90 0 17 50 50 50 50 0 3922018 AAAAACCCCGC GCGAGGTTTTT True AGAAAACAA GTTACATCA True True + AAAAACCCCGC CGAA GCGAGGTTTTT GTTACATCA 74 STM3727 intergenic 3921963 3922050 - down ATTCTCGCTTTGATGTAACAAAAACCTCGCTTCGGCGGGGTTTTTTGTTTTCTGGCCGTCCCCATATTAATGAGACCTGCCACACAG TCTACAAAGAAGCGAAAATCAAATAATTCTCGCTTTGATGTAACAAAAACCTCGCTTCGGCGGGGTTTTTTGTTTTCTGGCCGTCCCCATATTAATGAGACCTGCCACACAGCCGGAGACGTTATGCCTGAATTACC CTGTGTGGCAGGTCTCATTAATATGGGGACGGCCAGAAAACAAAAAACCCCGCCGAAGCGAGGTTTTT 68 TTerm_0354 NC_003197.2 3930320 3930325 6 3930333 3930338 6 7 100 0 12 0 100 0 100 0 3930328 CGGCGC GCGCCG True CTCACCGGC TTCTTTTAA False True + CGGCGC GTCCAGG GCGCCG TTCTTTTAA 72 STM3737 intergenic 3930303 3930542 + down TGAAATAACTCACCGGCGGCGCGTCCAGGGCGCCGTTCTTTTAAATTATCTAAGTCAAAATAGAAAAACCTCGCATACAATAAACCACAAAAATGATGTTCAATTTATTGATATTTATAATAAATAATTATTAATTATAAATTTAAAATCATTACTAAAATTTATTAATCGTGTAATGCCTTAGAAAATCTCAATCGTGATACAGCGCACAAATCGTTAATCTTCGCCCCCAGTAAATT ACAACTTACCGCACAGCAGCCATAATGAAATAACTCACCGGCGGCGCGTCCAGGGCGCCGTTCTTTTAAATTATCTAAGTCAAAATAGAAAAACCTCGCATACAATAAACCACAAAAATGATGTTCAATTTATTGATATTTATAATAAATAATTATTAATTATAAATTTAAAATCATTACTAAAATTTATTAATCGTGTAATGCCTTAGAAAATCTCAATCGTGATACAGCGCACAAATCGTTAATCTTCGCCCCCAGTAAATTAGGGGGAAATCATGCTGTTGCACGT TGAAATAACTCACCGGCGGCGCGTCCAGGGCGCCG 35 TTerm_0355 NC_003197.2 3961380 3961386 7 3961391 3961397 7 4 100 0 14 57 42 57 42 0 3961388 TATCAGG CCTGATA True ATGATTGCT AAAAATTTT False True + TATCAGG ACAA CCTGATA AAAAATTTT 52 STM3763 intergenic 3961244 3961554 - down ATAATGTTTGAGGATCGCCCAGATGAATCGCTCACCCGATAAAATCATCGCGCTGATATTTTTACTGATTAGCCTGTTGGTGTTGTGTTTAGCCCTCTGGCAAATCGTTTTCTAACGAGGTGACGCCATGCAAAAAAGAGGGTTGGACAAAATTTTTTATCAGGTTGTCCTGATAGCAATCATCCTGATTTTACTGACTATCTGGATACGATAAGCTGCTGTTGGCGAGCCCCGCTTAAAATAAGAATCGATGTAGTTGTTCTTTTTATGGCGGGGCGCTATTTTCATGGTATCCCACATCAGAAGGGCA TCAAACGCTTTGGCCAGTGGTTTTAATAATGTTTGAGGATCGCCCAGATGAATCGCTCACCCGATAAAATCATCGCGCTGATATTTTTACTGATTAGCCTGTTGGTGTTGTGTTTAGCCCTCTGGCAAATCGTTTTCTAACGAGGTGACGCCATGCAAAAAAGAGGGTTGGACAAAATTTTTTATCAGGTTGTCCTGATAGCAATCATCCTGATTTTACTGACTATCTGGATACGATAAGCTGCTGTTGGCGAGCCCCGCTTAAAATAAGAATCGATGTAGTTGTTCTTTTTATGGCGGGGCGCTATTTTCATGGTATCCCACATCAGAAGGGCAATATCATGAATAATCGTCGTGGTTT TGCCCTTCTGATGTGGGATACCATGAAAATAGCGCCCCGCCATAAAAAGAACAACTACATCGATTCTTATTTTAAGCGGGGCTCGCCAACAGCAGCTTATCGTATCCAGATAGTCAGTAAAATCAGGATGATTGCTATCAGGACAACCTGATA 153 TTerm_0356 NC_003197.2 4049624 4049636 13 4049642 4049654 13 5 92 0 21 50 50 50 50 0 4049638 AACCCGCATTAAC GTTAACGCGGGTT True CGTTCACTA TTTACTTTC False True + AACCCGCATTAAC TGCCT GTTAACGCGGGTT TTTACTTTC 58 STM3843 intergenic 4049590 4049846 + down GTTTTAGTCCACCCTCGTCAGTGAACGTTCACTAACCCGCATTAACTGCCTGTTAACGCGGGTTTTTACTTTCCATACTCGTCCATAGTCGTGCGGGTTCATCCGCGATTTTTGTGTCCTGAATTGTCCCCATCTTTAAATCCCTCGTGTACCATTGTTTACTTTTTGATCTAAAAATTACATCAAATGAACACAAAAAACGGTATAAAAAACGCTCAAATATCCCTTCTCATGGACACACTATAGAGGTGAGATA CTCCAGCTTCTGTATCGGTAAGTAAGTTTTAGTCCACCCTCGTCAGTGAACGTTCACTAACCCGCATTAACTGCCTGTTAACGCGGGTTTTTACTTTCCATACTCGTCCATAGTCGTGCGGGTTCATCCGCGATTTTTGTGTCCTGAATTGTCCCCATCTTTAAATCCCTCGTGTACCATTGTTTACTTTTTGATCTAAAAATTACATCAAATGAACACAAAAAACGGTATAAAAAACGCTCAAATATCCCTTCTCATGGACACACTATAGAGGTGAGATATGGCACTTTCAGATACCAAATTACG GTTTTAGTCCACCCTCGTCAGTGAACGTTCACTAACCCGCATTAACTGCCTGTTAACGCGGGTT 64 TTerm_0357 NC_003197.2 4051316 4051328 13 4051335 4051347 13 6 100 0 26 69 30 69 30 0 4051331 AAAAAACGAGCAA TTGCTCGTTTTTT True TAAAGAGTA TCATCAACG True True + AAAAAACGAGCAA AAAACA TTGCTCGTTTTTT TCATCAACG 76 STM3844 intergenic 4051066 4051391 + down ATAATATGGAAAATATAACAATAATAGTTTCTGATTAGAATATACTATCTAACCGGTTGAAAAAGATGCACTTCTCAACCATAATAACATCACTCTTTAGCGTTAGGCTTTGATTTATAGCCTTGTCGAGCGTTTCGCCAGACACTAACTTATTGAGTACTTTTAGGGTTGCGCTAGAAAGTTTTCTACCGATCCTAGAAGTCTCTAGGATCGGTAGAAAACTTTCTAGCGCCTCCTCTAGTAAAGAGTAAAAAACGAGCAAAAAACATTGCTCGTTTTTTTCATCAACGGAAGACAAATCAAAAATACATAACGTTTAAATCAA GAAGTCTTACAATGTAACCGTATGAATAATATGGAAAATATAACAATAATAGTTTCTGATTAGAATATACTATCTAACCGGTTGAAAAAGATGCACTTCTCAACCATAATAACATCACTCTTTAGCGTTAGGCTTTGATTTATAGCCTTGTCGAGCGTTTCGCCAGACACTAACTTATTGAGTACTTTTAGGGTTGCGCTAGAAAGTTTTCTACCGATCCTAGAAGTCTCTAGGATCGGTAGAAAACTTTCTAGCGCCTCCTCTAGTAAAGAGTAAAAAACGAGCAAAAAACATTGCTCGTTTTTTTCATCAACGGAAGACAAATCAAAAATACATAACGTTTAAATCAATGTTTGAAGAAACTATTAAAAAACA ATAATATGGAAAATATAACAATAATAGTTTCTGATTAGAATATACTATCTAACCGGTTGAAAAAGATGCACTTCTCAACCATAATAACATCACTCTTTAGCGTTAGGCTTTGATTTATAGCCTTGTCGAGCGTTTCGCCAGACACTAACTTATTGAGTACTTTTAGGGTTGCGCTAGAAAGTTTTCTACCGATCCTAGAAGTCTCTAGGATCGGTAGAAAACTTTCTAGCGCCTCCTCTAGTAAAGAGTAAAAAACGAGCAAAAAACATTGCTCGTTTTTT 281 TTerm_0358 NC_003197.2 4072708 4072717 10 4072726 4072735 10 8 100 0 20 50 50 50 50 0 4072721 AAAACCAGCG CGCTGGTTTT True GAAAAGCAA CCGTTGCGC True True + AAAACCAGCG ACAGAGGC CGCTGGTTTT CCGTTGCGC 80 STM3863 intergenic 4072513 4072756 - down AGTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTTTTGCTTTTCTGACTCCCCTGCGCTTTATTACGTTATCTTCTTTATTTATGGAGTAAAAAAACAGCAAAAACATCGGACTACGTTGCCAATACGCGGGTGTTTTTACTTTTCAGGAGACAAGAGGCGCGGTAATGAACGAAAATGATTCATTAGCAGGCGGGGATTTTATCCCGGTGAGCGTTTTATCCTTCTTCC TGCGGATTTTTATGTCGCGTAATTAAGTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTTTTGCTTTTCTGACTCCCCTGCGCTTTATTACGTTATCTTCTTTATTTATGGAGTAAAAAAACAGCAAAAACATCGGACTACGTTGCCAATACGCGGGTGTTTTTACTTTTCAGGAGACAAGAGGCGCGGTAATGAACGAAAATGATTCATTAGCAGGCGGGGATTTTATCCCGGTGAGCGTTTTATCCTTCTTCCATTTTACGATGAAAAAAATGTAGTA GGAAGAAGGATAAAACGCTCACCGGGATAAAATCCCCGCCTGCTAATGAATCATTTTCGTTCATTACCGCGCCTCTTGTCTCCTGAAAAGTAAAAACACCCGCGTATTGGCAACGTAGTCCGATGTTTTTGCTGTTTTTTTACTCCATAAATAAAGAAGATAACGTAATAAAGCGCAGGGGAGTCAGAAAAGCAAAAACCAGCGACAGAGGCCGCTGGTTTT 222 TTerm_0359 NC_003197.2 4073639 4073648 10 4073657 4073666 10 8 100 0 20 60 40 60 40 0 4073652 AAAACCAGTC GACTGGTTTT True GATAAAAAA ATGCTTTCA True True + AAAACCAGTC CGCAATCA GACTGGTTTT ATGCTTTCA 72 STM3864 intergenic 4073460 4073684 - down ACACCGGCTTGAAAGCATAAAACCAGTCTGATTGCGGACTGGTTTTTTTTTATCCTCTCAATTTTTATTCGATAAACTAGCAACGACAAAAACAAGCGGCTGAAGGCGACGCGTTTTCAGCGACAGCGCTGTTTTCATTAAATCCTTCTTTCTGTCATTGGCATCTGCACATTGTGCGAAGAAGGGAGGAATGGATGCGTTTTTATTGCATAAAATGAGGGATT TCGAGTTGACCAAAAAAGCGATGTAACACCGGCTTGAAAGCATAAAACCAGTCTGATTGCGGACTGGTTTTTTTTTATCCTCTCAATTTTTATTCGATAAACTAGCAACGACAAAAACAAGCGGCTGAAGGCGACGCGTTTTCAGCGACAGCGCTGTTTTCATTAAATCCTTCTTTCTGTCATTGGCATCTGCACATTGTGCGAAGAAGGGAGGAATGGATGCGTTTTTATTGCATAAAATGAGGGATTATTACTATGTCATTTCAGCCATCCT AATCCCTCATTTTATGCAATAAAAACGCATCCATTCCTCCCTTCTTCGCACAATGTGCAGATGCCAATGACAGAAAGAAGGATTTAATGAAAACAGCGCTGTCGCTGAAAACGCGTCGCCTTCAGCCGCTTGTTTTTGTCGTTGCTAGTTTATCGAATAAAAATTGAGAGGATAAAAAAAAACCAGTCCGCAATCAGACTGGTTTT 206 TTerm_0360 NC_003197.2 4106853 4106861 9 4106867 4106875 9 5 100 0 18 55 44 55 44 0 4106863 AAAAAGGGC GCCCTTTTT True TGATTAATA TTACGCCAA True True + AAAAAGGGC GTAAT GCCCTTTTT TTACGCCAA 68 STM3898 intergenic 4106851 4106876 + down TAAAAAGGGCGTAATGCCCTTTTTT AGACTACACCGAAGCTGATGATTAATAAAAAGGGCGTAATGCCCTTTTTTTACGCCAACAGCTTTTGCAAATGAA TAAAAAGGGCGTAATGCCCTTTTT 24 TTerm_0361 NC_003197.2 4106853 4106861 9 4106867 4106875 9 5 100 0 18 55 44 55 44 0 4106863 AAAAAGGGC GCCCTTTTT True TGATTAATA TTACGCCAA True True + AAAAAGGGC GTAAT GCCCTTTTT TTACGCCAA 68 STM3899 intergenic 4106851 4106876 - down AAAAAAGGGCATTACGCCCTTTTTA TTCATTTGCAAAAGCTGTTGGCGTAAAAAAAGGGCATTACGCCCTTTTTATTAATCATCAGCTTCGGTGTAGTCT TAAAAAGGGCGTAATGCCCTTTTT 24 TTerm_0362 NC_003197.2 4108867 4108880 14 4108885 4108898 14 4 85 0 18 32 67 33 66 0 4108882 AAGACCCCCGCACC GGTCCGGGGGTTTT True AACGAACTA TTTTGGCCT False True + AAGACCCCCGCACC GAAA GGTCCGGGGGTTTT TTTTGGCCT 76 STM3900 intergenic 4108846 4108972 + down AAATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGGCCTGAAAAACTTAAGCGAGGAGCAGAGCGTGAATAACAGCATAAAATTCTGTTTCTCAAGATTTACGA TGCACTTGGACGAGGAAAGGCTTAGAAATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTTTTTTGGCCTGAAAAACTTAAGCGAGGAGCAGAGCGTGAATAACAGCATAAAATTCTGTTTCTCAAGATTTACGACGGGGATGTAACTATGAACGGGGCA AAATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGGGTTTT 52 TTerm_0363 NC_003197.2 4126872 4126883 12 4126888 4126899 12 4 100 0 24 50 50 50 50 0 4126885 AAAACGCCACGT ACGTGGCGTTTT True TTTACCTGA TGTTTTGCG True True + AAAACGCCACGT TTTT ACGTGGCGTTTT TGTTTTGCG 80 STM3917 intergenic 4126856 4127086 + down CCTGGTCTTTACCTGAAAACGCCACGTTTTTACGTGGCGTTTTTGTTTTGCGATTCATCCTGGCGTCATGTCATATAAACTGGTCATCGGGATATGCGCTACAGAGTAACACCATGCACAATACACATTGTTTGCGGTAAAAAGTGTAATGTTCTAACAGGTCTCTTCTAGGAGCTGGCGTAACGCATTATACTTTAAGGAAATGATATATGCTGAGAGCACATACACTG TTTCGAGATGATGAAGCGCTCATAACCTGGTCTTTACCTGAAAACGCCACGTTTTTACGTGGCGTTTTTGTTTTGCGATTCATCCTGGCGTCATGTCATATAAACTGGTCATCGGGATATGCGCTACAGAGTAACACCATGCACAATACACATTGTTTGCGGTAAAAAGTGTAATGTTCTAACAGGTCTCTTCTAGGAGCTGGCGTAACGCATTATACTTTAAGGAAATGATATATGCTGAGAGCACATACACTGTGAAGTTACTCACCGCTTTATCTGA CCTGGTCTTTACCTGAAAACGCCACGTTTTTACGTGGCGTTTT 43 TTerm_0364 NC_003197.2 4141360 4141367 8 4141372 4141379 8 4 100 0 16 25 75 25 75 0 4141369 AACCCCGC GCGGGGTT True CAATTTTGA TTTTGTTTT False True + AACCCCGC TTCG GCGGGGTT TTTTGTTTT 80 STM3934 intergenic 4141350 4141935 + down CCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTTCCTTTTCAACCCCTTATCCCGCACGTGTTGCCATTATGATTTGTTGGCGATATCCCAGGCTTCATTTGTCGCTATTCGGTGACGAGTAATCTATTGATTTATAATCACTTTGTAAAAAGCATCCTGTTCTGTCTCCACCGGGCGACACGCTAAAACCTCGCCAGCGGCGGGGGGATGACAATCGCGTGAATTCTCTACGTTTTTTTAATGCCTGCGCCTGTTTTTTAGCGGTGCAAAGATGGCACGTTATGTGCAATAATGTACGGGTAGATGCTCATTCCATCTCTTATGTTCGCCTTCTGGCCTCATAAACTCAGGAATGATGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTACGCCTCATCAAACACCCTGGACACAACGTTGAGTGAAGCACCCCTTTATGTTGTCATACAGACCTGTTTTGACGCCTGCCCCTTAACCGGGCAGGCGTTTTTTTATGCATCTCGAATGATTTTGTGTAGGCGGTAGGCCCGGTAAGCGAAGCGCCACCGGGCAAGAGGGAAT CCAATTTTGAACCCCGCTTCGGCGGGGTT 29 TTerm_0365 NC_003197.2 4141360 4141367 8 4141372 4141379 8 4 100 0 16 25 75 25 75 0 4141369 AACCCCGC GCGGGGTT True CAATTTTGA TTTTGTTTT False True + AACCCCGC TTCG GCGGGGTT TTTTGTTTT 80 STM3935 intergenic 4141350 4141935 - down ATTCCCTCTTGCCCGGTGGCGCTTCGCTTACCGGGCCTACCGCCTACACAAAATCATTCGAGATGCATAAAAAAACGCCTGCCCGGTTAAGGGGCAGGCGTCAAAACAGGTCTGTATGACAACATAAAGGGGTGCTTCACTCAACGTTGTGTCCAGGGTGTTTGATGAGGCGTAAGCGACATCTGTCAGTGGACGATAAGCACCGTAAACGGCTCTGCATCATTCCTGAGTTTATGAGGCCAGAAGGCGAACATAAGAGATGGAATGAGCATCTACCCGTACATTATTGCACATAACGTGCCATCTTTGCACCGCTAAAAAACAGGCGCAGGCATTAAAAAAACGTAGAGAATTCACGCGATTGTCATCCCCCCGCCGCTGGCGAGGTTTTAGCGTGTCGCCCGGTGGAGACAGAACAGGATGCTTTTTACAAAGTGATTATAAATCAATAGATTACTCGTCACCGAATAGCGACAAATGAAGCCTGGGATATCGCCAACAAATCATAATGGCAACACGTGCGGGATAAGGGGTTGAAAAGGAACAGAAAACAAAAAACCCCGCCGAAGCGGGGTTCAAAATTGG CCAATTTTGAACCCCGCTTCGGCGGGGTT 29 TTerm_0366 NC_003197.2 4141835 4141844 10 4141852 4141861 10 7 100 0 20 20 80 20 80 0 4141847 ACGCCTGCCC GGGCAGGCGT True CTGTTTTGA TTTTTTATG False True + ACGCCTGCCC CTTAACC GGGCAGGCGT TTTTTTATG 80 STM3934 intergenic 4141350 4141935 + down CCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTTCCTTTTCAACCCCTTATCCCGCACGTGTTGCCATTATGATTTGTTGGCGATATCCCAGGCTTCATTTGTCGCTATTCGGTGACGAGTAATCTATTGATTTATAATCACTTTGTAAAAAGCATCCTGTTCTGTCTCCACCGGGCGACACGCTAAAACCTCGCCAGCGGCGGGGGGATGACAATCGCGTGAATTCTCTACGTTTTTTTAATGCCTGCGCCTGTTTTTTAGCGGTGCAAAGATGGCACGTTATGTGCAATAATGTACGGGTAGATGCTCATTCCATCTCTTATGTTCGCCTTCTGGCCTCATAAACTCAGGAATGATGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTACGCCTCATCAAACACCCTGGACACAACGTTGAGTGAAGCACCCCTTTATGTTGTCATACAGACCTGTTTTGACGCCTGCCCCTTAACCGGGCAGGCGTTTTTTTATGCATCTCGAATGATTTTGTGTAGGCGGTAGGCCCGGTAAGCGAAGCGCCACCGGGCAAGAGGGAAT CCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTTCCTTTTCAACCCCTTATCCCGCACGTGTTGCCATTATGATTTGTTGGCGATATCCCAGGCTTCATTTGTCGCTATTCGGTGACGAGTAATCTATTGATTTATAATCACTTTGTAAAAAGCATCCTGTTCTGTCTCCACCGGGCGACACGCTAAAACCTCGCCAGCGGCGGGGGGATGACAATCGCGTGAATTCTCTACGTTTTTTTAATGCCTGCGCCTGTTTTTTAGCGGTGCAAAGATGGCACGTTATGTGCAATAATGTACGGGTAGATGCTCATTCCATCTCTTATGTTCGCCTTCTGGCCTCATAAACTCAGGAATGATGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTACGCCTCATCAAACACCCTGGACACAACGTTGAGTGAAGCACCCCTTTATGTTGTCATACAGACCTGTTTTGACGCCTGCCCCTTAACCGGGCAGGCGT 511 TTerm_0367 NC_003197.2 4141835 4141844 10 4141852 4141861 10 7 100 0 20 20 80 20 80 0 4141847 ACGCCTGCCC GGGCAGGCGT True CTGTTTTGA TTTTTTATG False True + ACGCCTGCCC CTTAACC GGGCAGGCGT TTTTTTATG 80 STM3935 intergenic 4141350 4141935 - down ATTCCCTCTTGCCCGGTGGCGCTTCGCTTACCGGGCCTACCGCCTACACAAAATCATTCGAGATGCATAAAAAAACGCCTGCCCGGTTAAGGGGCAGGCGTCAAAACAGGTCTGTATGACAACATAAAGGGGTGCTTCACTCAACGTTGTGTCCAGGGTGTTTGATGAGGCGTAAGCGACATCTGTCAGTGGACGATAAGCACCGTAAACGGCTCTGCATCATTCCTGAGTTTATGAGGCCAGAAGGCGAACATAAGAGATGGAATGAGCATCTACCCGTACATTATTGCACATAACGTGCCATCTTTGCACCGCTAAAAAACAGGCGCAGGCATTAAAAAAACGTAGAGAATTCACGCGATTGTCATCCCCCCGCCGCTGGCGAGGTTTTAGCGTGTCGCCCGGTGGAGACAGAACAGGATGCTTTTTACAAAGTGATTATAAATCAATAGATTACTCGTCACCGAATAGCGACAAATGAAGCCTGGGATATCGCCAACAAATCATAATGGCAACACGTGCGGGATAAGGGGTTGAAAAGGAACAGAAAACAAAAAACCCCGCCGAAGCGGGGTTCAAAATTGG CCAATTTTGAACCCCGCTTCGGCGGGGTTTTTTGTTTTCTGTTCCTTTTCAACCCCTTATCCCGCACGTGTTGCCATTATGATTTGTTGGCGATATCCCAGGCTTCATTTGTCGCTATTCGGTGACGAGTAATCTATTGATTTATAATCACTTTGTAAAAAGCATCCTGTTCTGTCTCCACCGGGCGACACGCTAAAACCTCGCCAGCGGCGGGGGGATGACAATCGCGTGAATTCTCTACGTTTTTTTAATGCCTGCGCCTGTTTTTTAGCGGTGCAAAGATGGCACGTTATGTGCAATAATGTACGGGTAGATGCTCATTCCATCTCTTATGTTCGCCTTCTGGCCTCATAAACTCAGGAATGATGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTACGCCTCATCAAACACCCTGGACACAACGTTGAGTGAAGCACCCCTTTATGTTGTCATACAGACCTGTTTTGACGCCTGCCCCTTAACCGGGCAGGCGT 511 TTerm_0368 NC_003197.2 4162540 4162547 8 4162554 4162561 8 6 100 0 16 25 75 25 75 0 4162550 CAGGCGCT AGCGCCTG True TTCTCTCGC TTTTGATTT False True + CAGGCGCT GAAAAT AGCGCCTG TTTTGATTT 72 STM3957 intergenic 4162505 4162571 + down TTGGATTGTGTTTTAAACATTGCAGTTTCTCTCGCAGGCGCTGAAAATAGCGCCTGTTTTGATTTA CGTGATGCTTAACGATATCTTCTGATTGGATTGTGTTTTAAACATTGCAGTTTCTCTCGCAGGCGCTGAAAATAGCGCCTGTTTTGATTTATGGTGAACGGGGTTAATGTGGCGCA TTGGATTGTGTTTTAAACATTGCAGTTTCTCTCGCAGGCGCTGAAAATAGCGCCTG 56 TTerm_0369 NC_003197.2 4175655 4175663 9 4175669 4175677 9 5 100 0 18 44 55 44 55 0 4175665 AAAGGCCGA TCGGCCTTT True TCTTTTGCA TCTTTTTGC False True + AAAGGCCGA CGCGT TCGGCCTTT TCTTTTTGC 76 STM3968 intergenic 4175638 4175765 + down TTCTCCTCTCTTTTGCAAAGGCCGACGCGTTCGGCCTTTTCTTTTTGCGTGGCGCCTCGCAGGAAATCCCTTTTAAACTGGACGTTTATACAGCACAATTCTATTTTGTGCAGGACAGTGTGGTTCC GGAAGCGGCCCGTCGTCTGCTGTAATTCTCCTCTCTTTTGCAAAGGCCGACGCGTTCGGCCTTTTCTTTTTGCGTGGCGCCTCGCAGGAAATCCCTTTTAAACTGGACGTTTATACAGCACAATTCTATTTTGTGCAGGACAGTGTGGTTCCAGGAGAGGTGTTGTGGATATTACTC TTCTCCTCTCTTTTGCAAAGGCCGACGCGTTCGGCCTTT 39 TTerm_0370 NC_003197.2 4185886 4185892 7 4185897 4185903 7 4 100 0 14 14 85 14 85 0 4185894 GGGACGC GCGTCCC True TATTTTATG TTTTTACGT False True + GGGACGC AGTA GCGTCCC TTTTTACGT 68 STM3979 intergenic 4185876 4186124 + down CTATTTTATGGGACGCAGTAGCGTCCCTTTTTACGTTAGCCTACCTAAAAGTCCTCTTAAATATTAATTAATCGTCAACTATAAAACCTTATGATATTGAATATCTACAGGCTTTGTATTGCGTGTAATAAATTAAGTAATATTATGTCCTGAGGCTATCAATAAAAATAGTTAATTATATATGCTTCATTTATTTTTATAAAAGAAACATAAAATGGAAAGTTAGTTATTTATTTATAAGATGGAGA TGGCGATGCGTTCGCATTTATTTAACTATTTTATGGGACGCAGTAGCGTCCCTTTTTACGTTAGCCTACCTAAAAGTCCTCTTAAATATTAATTAATCGTCAACTATAAAACCTTATGATATTGAATATCTACAGGCTTTGTATTGCGTGTAATAAATTAAGTAATATTATGTCCTGAGGCTATCAATAAAAATAGTTAATTATATATGCTTCATTTATTTTTATAAAAGAAACATAAAATGGAAAGTTAGTTATTTATTTATAAGATGGAGAGTGTTATGAAATTTAAATATGCTTT CTATTTTATGGGACGCAGTAGCGTCCC 27 TTerm_0371 NC_003197.2 4196043 4196051 9 4196061 4196069 9 9 88 0 13 83 16 87 12 0 4196055 AAGTTTAAT ATCAAACTT True TCATTACGA TTAAATTGA False True + AAGTTTAAT TCATTGAGC ATCAAACTT TTAAATTGA 34 STM3987 intergenic 4195694 4196072 + down ACGCAAAGAATAAAAAGTGCGCACTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCAAAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCAGCGGGGTTCGGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTA AACCAACAAATCGTCGGCAAAATAAACGCAAAGAATAAAAAGTGCGCACTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCAAAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCAGCGGGGTTCGGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCA ACGCAAAGAATAAAAAGTGCGCACTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCAAAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCAGCGGGGTTCGGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTT 375 TTerm_0372 NC_003197.2 4197968 4197985 18 4197992 4198009 18 6 77 0 16 58 41 57 42 0 4197988 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True + AATACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTTTT GCTCTTTAA 56 STM3990 intergenic 4197943 4198129 + down CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG TGCGGTTCGATCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTT 66 TTerm_0373 NC_003197.2 4201435 4201457 23 4201462 4201484 23 4 86 0 31 54 45 55 45 0 4201459 CAAATAAAACGAAGGGCCCTGTC GACAGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True + CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTC 94 STM3992 intergenic 4201436 4201697 + down AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCC GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAAGGAACGTGCTTTCTCTAACC AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTG 48 TTerm_0374 NC_003197.2 4201435 4201457 23 4201462 4201484 23 4 86 0 31 54 45 55 45 0 4201459 CAAATAAAACGAAGGGCCCTGTC GACAGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True + CAAATAAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTTATCTG TGGTCTGTC 94 STM3993 intergenic 4201436 4201697 - down GGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATT GGTTAGAGAAAGCACGTTCCTTGTAGGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTC AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTG 48 TTerm_0375 NC_003197.2 4201575 4201587 13 4201592 4201604 13 4 84 0 16 46 53 45 54 0 4201589 AAGAAGCCCATCC GGACGGGCTTTTT True GTTTAGTGA TGCGTGTGC False True + AAGAAGCCCATCC TGAC GGACGGGCTTTTT TGCGTGTGC 72 STM3992 intergenic 4201436 4201697 + down AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCC GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAAGGAACGTGCTTTCTCTAACC AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTT 168 TTerm_0376 NC_003197.2 4201575 4201587 13 4201592 4201604 13 4 84 0 16 46 53 45 54 0 4201589 AAGAAGCCCATCC GGACGGGCTTTTT True GTTTAGTGA TGCGTGTGC False True + AAGAAGCCCATCC TGAC GGACGGGCTTTTT TGCGTGTGC 72 STM3993 intergenic 4201436 4201697 - down GGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATT GGTTAGAGAAAGCACGTTCCTTGTAGGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTC AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTT 168 TTerm_0377 NC_003197.2 4209155 4209165 11 4209171 4209181 11 5 100 0 22 27 72 27 72 0 4209167 CGCCCCAGTCA TGACTGGGGCG True ATTTTAGCC TTTTTTATT False True + CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATT 68 STM4000 intergenic 4209144 4209265 + down ATATTTTAGCCGCCCCAGTCAGTTTATGACTGGGGCGTTTTTTATTGTGCGCAAGAAAAGTTTCGCTCACACCGTAGGCCGGATAAGACGCGCAGCGGCGCCATCCGGCATAGCGGGTGAT ACTTCACGTAATCGGATTTGGCTGAATATTTTAGCCGCCCCAGTCAGTTTATGACTGGGGCGTTTTTTATTGTGCGCAAGAAAAGTTTCGCTCACACCGTAGGCCGGATAAGACGCGCAGCGGCGCCATCCGGCATAGCGGGTGATTATTCCCCGTCCTGAATCTCTTCGA ATATTTTAGCCGCCCCAGTCAGTTTATGACTGGGGCG 37 TTerm_0378 NC_003197.2 4209155 4209165 11 4209171 4209181 11 5 100 0 22 27 72 27 72 0 4209167 CGCCCCAGTCA TGACTGGGGCG True ATTTTAGCC TTTTTTATT False True + CGCCCCAGTCA GTTTA TGACTGGGGCG TTTTTTATT 68 STM4001 intergenic 4209144 4209265 - down ATCACCCGCTATGCCGGATGGCGCCGCTGCGCGTCTTATCCGGCCTACGGTGTGAGCGAAACTTTTCTTGCGCACAATAAAAAACGCCCCAGTCATAAACTGACTGGGGCGGCTAAAATAT TCGAAGAGATTCAGGACGGGGAATAATCACCCGCTATGCCGGATGGCGCCGCTGCGCGTCTTATCCGGCCTACGGTGTGAGCGAAACTTTTCTTGCGCACAATAAAAAACGCCCCAGTCATAAACTGACTGGGGCGGCTAAAATATTCAGCCAAATCCGATTACGTGAAGT ATATTTTAGCCGCCCCAGTCAGTTTATGACTGGGGCG 37 TTerm_0379 NC_003197.2 4210374 4210391 18 4210396 4210413 18 4 94 0 31 58 41 58 41 0 4210393 AAGAAAAAAGGCGGCAGA TCTGTCGCCTTTTTTCTT True CGTGAGTCA TGCTTGCTT True True + AAGAAAAAAGGCGGCAGA TTAC TCTGTCGCCTTTTTTCTT TGCTTGCTT 86 STM4002 intergenic 4210361 4210480 + down GGGTCGTGAGTCAAGAAAAAAGGCGGCAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGCTAGATTCCGCCTCAATTCTATACTGAATAAAACGGCTTAAAGATCTGACATCA CAACAGGGATGGTGGAACCCGTTAAGGGTCGTGAGTCAAGAAAAAAGGCGGCAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGCTAGATTCCGCCTCAATTCTATACTGAATAAAACGGCTTAAAGATCTGACATCATGAAAAAACCAACCTCTGCACCGCG GGGTCGTGAGTCAAGAAAAAAGGCGGCAGATTACTCTGTCGCCTTTTTTCTT 52 TTerm_0380 NC_003197.2 4219238 4219251 14 4219261 4219274 14 9 92 0 23 46 53 46 53 0 4219255 AAAAACCCTGCCGA TCGGCGGGGTTTTT True TTACGGATA TTATTCACG True True + AAAAACCCTGCCGA AATGAAAGC TCGGCGGGGTTTTT TTATTCACG 86 STM4009 intergenic 4219220 4219275 + down TTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTTT GAACCGTGGTCAGAAAGAAGAGTAATTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTTTTATTCACGTTGAGAAAGGGATAAGG TTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTT 54 TTerm_0381 NC_003197.2 4219238 4219251 14 4219261 4219274 14 9 92 0 23 46 53 46 53 0 4219255 AAAAACCCTGCCGA TCGGCGGGGTTTTT True TTACGGATA TTATTCACG True True + AAAAACCCTGCCGA AATGAAAGC TCGGCGGGGTTTTT TTATTCACG 86 STM4010 intergenic 4219220 4219275 - down AAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTTTATCCGTAAGAGCGTTAA CCTTATCCCTTTCTCAACGTGAATAAAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTTTATCCGTAAGAGCGTTAATTACTCTTCTTTCTGACCACGGTTC TTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTT 54 TTerm_0382 NC_003197.2 4227218 4227224 7 4227229 4227235 7 4 100 0 14 28 71 28 71 0 4227226 AACGCCC GGGCGTT True CCTCTCAAA ATATTTTAT True True + AACGCCC CGCA GGGCGTT ATATTTTAT 68 STM4018 intergenic 4227213 4227250 - down ACAACAATAAAATATAACGCCCTGCGGGGCGTTTTGA TTGAGGCCCGGAAACATACGGTTTAACAACAATAAAATATAACGCCCTGCGGGGCGTTTTGAGAGGCGATTATGTCTAATCATGATC TCAAAACGCCCCGCAGGGCGTT 22 TTerm_0383 NC_003197.2 4240477 4240484 8 4240492 4240499 8 7 87 0 11 81 18 85 14 0 4240487 TTCAAGTT AAATTGAA True ATCCAGTTT TTTTAGGTC False True + TTCAAGTT GAAAACA AAATTGAA TTTTAGGTC 30 STM4032 intergenic 4240429 4240502 - down AAATTCAATTTTGTTTTCAACTTGAAAACTGGATAACGTTGCGCTAAATTGTTTTCAGGTTGAAAACTTTGTA GTCCATCAACAGGCAAAATGACCTAAAATTCAATTTTGTTTTCAACTTGAAAACTGGATAACGTTGCGCTAAATTGTTTTCAGGTTGAAAACTTTGTAATGGAACTACATTGTGCATGTTATC TACAAAGTTTTCAACCTGAAAACAATTTAGCGCAACGTTATCCAGTTTTCAAGTTGAAAACAAAATTGAA 70 TTerm_0384 NC_003197.2 4251500 4251509 10 4251515 4251524 10 5 100 0 20 50 50 50 50 0 4251511 AAAAAGCGCC GGCGCTTTTT True ACGCCAATA TCGTTCATG True True + AAAAAGCGCC GATCA GGCGCTTTTT TCGTTCATG 80 STM4040 intergenic 4251434 4251789 + down GTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTTTCGTTCATGTATTCTTCATCAGGCAATATCCGTAAAAATAGCTGACGTAAACATTAACTAAAGAGAGTTATTAGAAAAACCAGTAATCTGAAGCTATCACAAGATGTTGACGTCACGCTGGAAGGTACTGGTAGTGTCATTGAGGATCGGCATTTATATGGAAAGCATTTATCCCCCTGATGCGAAAATTCTGAGCTACTTCAGCATAGGGCGGCCCAGCCTTCATCACTTATAGGGTGTCACGTCCAACTGTTCTGTAAGACGT GGATGATTATAACCGCCTGCGTTGAGTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTTTCGTTCATGTATTCTTCATCAGGCAATATCCGTAAAAATAGCTGACGTAAACATTAACTAAAGAGAGTTATTAGAAAAACCAGTAATCTGAAGCTATCACAAGATGTTGACGTCACGCTGGAAGGTACTGGTAGTGTCATTGAGGATCGGCATTTATATGGAAAGCATTTATCCCCCTGATGCGAAAATTCTGAGCTACTTCAGCATAGGGCGGCCCAGCCTTCATCACTTATAGGGTGTCACGTCCAACTGTTCTGTAAGACGTTAATTAATACCTGCCAGCCGCAACA GTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTT 90 TTerm_0385 NC_003197.2 4251500 4251509 10 4251515 4251524 10 5 100 0 20 50 50 50 50 0 4251511 AAAAAGCGCC GGCGCTTTTT True ACGCCAATA TCGTTCATG True True + AAAAAGCGCC GATCA GGCGCTTTTT TCGTTCATG 80 STM4041 intergenic 4251434 4251789 - down ACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTTTATTGGCGTTATCGCGTAATTTTATAGGCACTTGCGCCAGCCTGTGCGCAGTTAATGTGCCGTCAC TGTTGCGGCTGGCAGGTATTAATTAACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTTTATTGGCGTTATCGCGTAATTTTATAGGCACTTGCGCCAGCCTGTGCGCAGTTAATGTGCCGTCACTCAACGCAGGCGGTTATAATCATCC GTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTT 90 TTerm_0386 NC_003197.2 4263281 4263288 8 4263296 4263303 8 7 100 0 16 25 75 25 75 0 4263291 CCGGCTAC GTAGCCGG True TCCCTTTTC TTTTTTTTA False True + CCGGCTAC TTTATAG GTAGCCGG TTTTTTTTA 64 STM4051 intergenic 4263248 4263406 + down TCATTATCCCTGTTTATTATTTATTCCCTTTTCCGGCTACTTTATAGGTAGCCGGTTTTTTTTACCTGGTGATGACCTGCGGATAATTATTATCGCGCGTTGGCCGGATAAGACGCGAATCGCCATCCGGCAACGAGATGTGCAGGAAACTATGCGCT CGTGGGTATAGGCTACACATTCTAATCATTATCCCTGTTTATTATTTATTCCCTTTTCCGGCTACTTTATAGGTAGCCGGTTTTTTTTACCTGGTGATGACCTGCGGATAATTATTATCGCGCGTTGGCCGGATAAGACGCGAATCGCCATCCGGCAACGAGATGTGCAGGAAACTATGCGCTTACATGATGCCCAGTAGACGGGGTA TCATTATCCCTGTTTATTATTTATTCCCTTTTCCGGCTACTTTATAGGTAGCCGG 55 TTerm_0387 NC_003197.2 4263281 4263288 8 4263296 4263303 8 7 100 0 16 25 75 25 75 0 4263291 CCGGCTAC GTAGCCGG True TCCCTTTTC TTTTTTTTA False True + CCGGCTAC TTTATAG GTAGCCGG TTTTTTTTA 64 STM4052 intergenic 4263248 4263406 - down AGCGCATAGTTTCCTGCACATCTCGTTGCCGGATGGCGATTCGCGTCTTATCCGGCCAACGCGCGATAATAATTATCCGCAGGTCATCACCAGGTAAAAAAAACCGGCTACCTATAAAGTAGCCGGAAAAGGGAATAAATAATAAACAGGGATAATGA TACCCCGTCTACTGGGCATCATGTAAGCGCATAGTTTCCTGCACATCTCGTTGCCGGATGGCGATTCGCGTCTTATCCGGCCAACGCGCGATAATAATTATCCGCAGGTCATCACCAGGTAAAAAAAACCGGCTACCTATAAAGTAGCCGGAAAAGGGAATAAATAATAAACAGGGATAATGATTAGAATGTGTAGCCTATACCCACG TCATTATCCCTGTTTATTATTTATTCCCTTTTCCGGCTACTTTATAGGTAGCCGG 55 TTerm_0388 NC_003197.2 4268360 4268369 10 4268374 4268383 10 4 100 0 20 30 70 30 70 0 4268371 ATCGGCCTGC GCAGGCCGAT True GATAAAAAA GGTTTTTAG True True + ATCGGCCTGC ATTC GCAGGCCGAT GGTTTTTAG 80 STM4057 intergenic 4268338 4268389 + down ATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGATGGTTTT TCTGGTGCCGGAAATCTCCCGGTAAATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGATGGTTTTTAGGTTCGCTTGTACAGCGGTAGCC ATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGAT 45 TTerm_0389 NC_003197.2 4268360 4268369 10 4268374 4268383 10 4 100 0 20 30 70 30 70 0 4268371 ATCGGCCTGC GCAGGCCGAT True GATAAAAAA GGTTTTTAG True True + ATCGGCCTGC ATTC GCAGGCCGAT GGTTTTTAG 80 STM4058 intergenic 4268338 4268389 - down AAAACCATCGGCCTGCGAATGCAGGCCGATTTTTTATCTCGCCGTCGAGAT GGCTACCGCTGTACAAGCGAACCTAAAAACCATCGGCCTGCGAATGCAGGCCGATTTTTTATCTCGCCGTCGAGATTTACCGGGAGATTTCCGGCACCAGA ATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGAT 45 TTerm_0390 NC_003197.2 4275450 4275458 9 4275463 4275471 9 4 88 0 13 83 16 87 12 0 4275460 AAAGATATA TATACCTTT True ATCGATCAA ATATCTTTT True True + AAAGATATA AAGG TATACCTTT ATATCTTTT 42 STM4064 intergenic 4275354 4275610 + down TTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAAT TTGCGCCATTTTGTCTTCCCGCTGATTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAATATCAACATGAAACTTTCTATCGTGG TTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTT 117 TTerm_0391 NC_003197.2 4275458 4275466 9 4275471 4275479 9 4 88 0 13 83 16 87 12 0 4275468 AAAGGTATA TATATCTTT True AAAGATATA TGATGGTTA False True + AAAGGTATA CCTT TATATCTTT TGATGGTTA 34 STM4064 intergenic 4275354 4275610 + down TTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAAT TTGCGCCATTTTGTCTTCCCGCTGATTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAATATCAACATGAAACTTTCTATCGTGG TTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTT 125 TTerm_0392 NC_003197.2 4294311 4294319 9 4294324 4294332 9 4 100 0 18 33 66 33 66 0 4294321 TGTGCGGAG CTCCGCACA True TTGATGTGT AAGATTTTG False True + TGTGCGGAG TTGC CTCCGCACA AAGATTTTG 76 STM4086 intergenic 4294243 4294355 - down AGGTCGCCATCCGGCAAAATCTTTGTGCGGAGGCAACTCCGCACACACATCAATTATTCCCTCCTTCCCCTGTGCTACACTGCGCGCCACTCCTTTTTGCTACGAGTTTGTT TGGCGTGGGAAGAGCACGACAAGTAAGGTCGCCATCCGGCAAAATCTTTGTGCGGAGGCAACTCCGCACACACATCAATTATTCCCTCCTTCCCCTGTGCTACACTGCGCGCCACTCCTTTTTGCTACGAGTTTGTTATGAGACGAGAACTTGCCATCGAAT AACAAACTCGTAGCAAAAAGGAGTGGCGCGCAGTGTAGCACAGGGGAAGGAGGGAATAATTGATGTGTGTGCGGAGTTGCCTCCGCACA 89 TTerm_0393 NC_003197.2 4297559 4297570 12 4297575 4297586 12 4 100 0 24 50 50 50 50 0 4297572 AAAAAAGGCGCC GGCGCCTTTTTT True CAACGCATA GATCACTCG True True + AAAAAAGGCGCC TTAC GGCGCCTTTTTT GATCACTCG 96 STM4088 intergenic 4297367 4297589 + down TCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTTGAT GCTTGGTCGTATGGAAGAAGTCTAATCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTTGATCACTCGATATCAAGCGGGTCTTCGG TCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTT 219 TTerm_0394 NC_003197.2 4297559 4297570 12 4297575 4297586 12 4 100 0 24 50 50 50 50 0 4297572 AAAAAAGGCGCC GGCGCCTTTTTT True CAACGCATA GATCACTCG True True + AAAAAAGGCGCC TTAC GGCGCCTTTTTT GATCACTCG 96 STM4089 intergenic 4297367 4297589 - down ATCAAAAAAGGCGCCGTAAGGCGCCTTTTTTATGCGTTGTCGCTGATTGCCGGATGGCAGCTTACGCCTTATCCGGCCCACCGGTATCCGCATTCTAAATCCTCTATAGATTTCGCGTCAGGGCAAGGCGGCAAGTAAGTGAATCCCCAGGAGCATAGGCCACTATGTGACTGGGGTGAACGCACGCAGCCAACGCCGCCATAACGTGAAATATGACGAGGA CCGAAGACCCGCTTGATATCGAGTGATCAAAAAAGGCGCCGTAAGGCGCCTTTTTTATGCGTTGTCGCTGATTGCCGGATGGCAGCTTACGCCTTATCCGGCCCACCGGTATCCGCATTCTAAATCCTCTATAGATTTCGCGTCAGGGCAAGGCGGCAAGTAAGTGAATCCCCAGGAGCATAGGCCACTATGTGACTGGGGTGAACGCACGCAGCCAACGCCGCCATAACGTGAAATATGACGAGGATTAGACTTCTTCCATACGACCAAGC TCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTT 219 TTerm_0395 NC_003197.2 4306001 4306012 12 4306017 4306028 12 4 100 0 24 58 41 58 41 0 4306014 AAAAAAAGCGCC GGCGCTTTTTTT True CCGCCAGAA GTTTTCTAG True True + AAAAAAAGCGCC GCAG GGCGCTTTTTTT GTTTTCTAG 88 STM4096 intergenic 4305988 4306034 + down GTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTTGTTTTC CTTCAGCATCCCTGGCAGCAAATAAGTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTTGTTTTCTAGGGATAACAGTATTTGTTCAGAC GTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTT 40 TTerm_0396 NC_003197.2 4306001 4306012 12 4306017 4306028 12 4 100 0 24 58 41 58 41 0 4306014 AAAAAAAGCGCC GGCGCTTTTTTT True CCGCCAGAA GTTTTCTAG True True + AAAAAAAGCGCC GCAG GGCGCTTTTTTT GTTTTCTAG 88 STM4097 intergenic 4305988 4306034 - down GAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTTTTCTGGCGGTAAC GTCTGAACAAATACTGTTATCCCTAGAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTTTTCTGGCGGTAACTTATTTGCTGCCAGGGATGCTGAAG GTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTT 40 TTerm_0397 NC_003197.2 4306852 4306861 10 4306866 4306875 10 4 100 0 20 30 70 30 70 0 4306863 CAGGCGGAAG CTTCCGCCTG True TAACCATTC TTTTACTTT False True + CAGGCGGAAG TTAG CTTCCGCCTG TTTTACTTT 72 STM4098 intergenic 4306702 4306897 - down AAGCGAGATAGTAAAAGTAAAACAGGCGGAAGCTAACTTCCGCCTGAATGGTTAAAACGTATTGTAGTTATGACATTCGCCTTATTGCCCTCGAAGAGGAATGCAAAAATATCAATGAATTACCAATCCGGCACCGACCCGATAAGCGCAGCGTCATTAGACAAACGCCACAATATACCGCGCCTTTGCTGGTGA ATCCAGAGCAGATGTTTAAAAAATAAAGCGAGATAGTAAAAGTAAAACAGGCGGAAGCTAACTTCCGCCTGAATGGTTAAAACGTATTGTAGTTATGACATTCGCCTTATTGCCCTCGAAGAGGAATGCAAAAATATCAATGAATTACCAATCCGGCACCGACCCGATAAGCGCAGCGTCATTAGACAAACGCCACAATATACCGCGCCTTTGCTGGTGATATGTCATGAAAAATCTCTTTATCG TCACCAGCAAAGGCGCGGTATATTGTGGCGTTTGTCTAATGACGCTGCGCTTATCGGGTCGGTGCCGGATTGGTAATTCATTGATATTTTTGCATTCCTCTTCGAGGGCAATAAGGCGAATGTCATAACTACAATACGTTTTAACCATTCAGGCGGAAGTTAGCTTCCGCCTG 173 TTerm_0398 NC_003197.2 4335224 4335234 11 4335243 4335253 11 8 81 0 12 18 81 11 88 0 4335238 GCCGCCCCCAC GTGAGAGCGGC True TATTTCATG TCTCTTTTG False True + GCCGCCCCCAC ATAACTGC GTGAGAGCGGC TCTCTTTTG 48 STM4119 intergenic 4335067 4335266 - down ACGCCAAAAGAGAGCCGCTCTCACGCAGTTATGTGGGGGCGGCATGAAATACTGCTGTCATCCTCGTCATTTTTTCAATATATTTCTGTCTGCATTTTATGCATTTGTAAATCTTTCTTAGCAAAACGTGCGGCATAAAGCAGGTTTGCTTCAGATTCTTTTAAGGTTCAGGCGTTACGTTTGGCGCTACGATTAAAGA CTGCCGGTATGCGCAACACCGGCTAACGCCAAAAGAGAGCCGCTCTCACGCAGTTATGTGGGGGCGGCATGAAATACTGCTGTCATCCTCGTCATTTTTTCAATATATTTCTGTCTGCATTTTATGCATTTGTAAATCTTTCTTAGCAAAACGTGCGGCATAAAGCAGGTTTGCTTCAGATTCTTTTAAGGTTCAGGCGTTACGTTTGGCGCTACGATTAAAGACAGGCTCTCATTATGCAATCCACAT TCTTTAATCGTAGCGCCAAACGTAACGCCTGAACCTTAAAAGAATCTGAAGCAAACCTGCTTTATGCCGCACGTTTTGCTAAGAAAGATTTACAAATGCATAAAATGCAGACAGAAATATATTGAAAAAATGACGAGGATGACAGCAGTATTTCATGCCGCCCCCACATAACTGCGTGAGAGCGGC 186 TTerm_0399 NC_003197.2 4351114 4351122 9 4351132 4351140 9 9 88 0 13 83 16 87 12 0 4351126 AAGTTTAAT ATCAAACTT True TCATTACGA TTAAATTGA False True + AAGTTTAAT TCATTGAGC ATCAAACTT TTAAATTGA 34 STM4131 intergenic 4350763 4351143 + down TGGCGTTTTGGGTAAATACCAGGCACTTGAGAAATTATTTTAAATTTCCTCTTGTCAGGCAGAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCACCGGGGTTCAGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTA AACGCTCGAAAAACTGCCGGTTTAATGGCGTTTTGGGTAAATACCAGGCACTTGAGAAATTATTTTAAATTTCCTCTTGTCAGGCAGAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCACCGGGGTTCAGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTCA TGGCGTTTTGGGTAAATACCAGGCACTTGAGAAATTATTTTAAATTTCCTCTTGTCAGGCAGAAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCACACAGGCCGCCGGGTCACCGGGGTTCAGACCAGAACCTCACGGAGAAAAGCGAAAATAAACGCTTGACTCTGAAGCGGGAAAGCGTAATATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTAGGACGAAAAATGAATACCAAGTCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCATTGAGCATCAAACTT 377 TTerm_0400 NC_003197.2 4353039 4353056 18 4353063 4353080 18 6 77 0 16 58 41 57 42 0 4353059 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True + AATACTTCAGAGTGTACC TGAAAG GGTTCACTGCGAAGTTTT GCTCTTTAA 56 STM4134 intergenic 4353014 4353200 + down CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG TGCGGTTCGATCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTT 66 TTerm_0401 NC_003197.2 4356511 4356528 18 4356533 4356550 18 4 94 0 31 52 47 52 47 0 4356530 AAAACGAAAGGCCCTGTC GACAGGGCCTTTTGTTTT True CATCAAATA TGTCTGTTT True True + AAAACGAAAGGCCCTGTC GGAA GACAGGGCCTTTTGTTTT TGTCTGTTT 94 STM4136 intergenic 4356506 4356672 + down AAATAAAACGAAAGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGGACGCGCCGATCTACCCTCATTATAACCACAAGCCTTCCCAACACAGATACGGTAAACTATTGCCGATTGAGTATC CGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGGACGCGCCGATCTACCCTCATTATAACCACAAGCCTTCCCAACACAGATACGGTAAACTATTGCCGATTGAGTATCAGGAAAGCAGCCATGACCCACTCCC AAATAAAACGAAAGGCCCTGTCGGAAGACAGGGCCTTTTGTTTT 44 TTerm_0402 NC_003197.2 4358674 4358686 13 4358691 4358703 13 4 92 0 21 57 42 58 41 0 4358688 AAAAAGGGGGAGT ACTCCCCTTTTTT True CGAATAGTA CTGTTATTT True True + AAAAAGGGGGAGT CGGT ACTCCCCTTTTTT CTGTTATTT 74 STM4138 intergenic 4358672 4358707 + down TAAAAAGGGGGAGTCGGTACTCCCCTTTTTTCTGT AATATCGCTGCGAAGCGCCGAATAGTAAAAAGGGGGAGTCGGTACTCCCCTTTTTTCTGTTATTTCCGCAATCTTACCTGTTCCA TAAAAAGGGGGAGTCGGTACTCCCCTTTTTT 31 TTerm_0403 NC_003197.2 4358674 4358686 13 4358691 4358703 13 4 92 0 21 57 42 58 41 0 4358688 AAAAAGGGGGAGT ACTCCCCTTTTTT True CGAATAGTA CTGTTATTT True True + AAAAAGGGGGAGT CGGT ACTCCCCTTTTTT CTGTTATTT 74 STM4139 intergenic 4358672 4358707 - down ACAGAAAAAAGGGGAGTACCGACTCCCCCTTTTTA TGGAACAGGTAAGATTGCGGAAATAACAGAAAAAAGGGGAGTACCGACTCCCCCTTTTTACTATTCGGCGCTTCGCAGCGATATT TAAAAAGGGGGAGTCGGTACTCCCCTTTTTT 31 TTerm_0404 NC_003197.2 4363000 4363011 12 4363017 4363028 12 5 100 0 24 41 58 41 58 0 4363013 GGCGCGAAATTG CAATTTCGCGCC True TTGCATAGG TTTTGTTTT False True + GGCGCGAAATTG ACATA CAATTTCGCGCC TTTTGTTTT 56 STM4148 intergenic 4362960 4363106 + down GGCTGCGATCAAAAAAGCAGCGATCTAATCGTTGCATAGGGCGCGAAATTGACATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTATGCCCATAAAGCGATATTTATCACGGGGAGCTTCTTTGAAGCGATACTACCCAATTCG CTTCAGTCAGGTTGAGAAAGCGTAAGGCTGCGATCAAAAAAGCAGCGATCTAATCGTTGCATAGGGCGCGAAATTGACATACAATTTCGCGCCTTTTGTTTTTATGGGCCTTATGCCCATAAAGCGATATTTATCACGGGGAGCTTCTTTGAAGCGATACTACCCAATTCGAGGAATTTAGAATGGCTAAGAAAGT GGCTGCGATCAAAAAAGCAGCGATCTAATCGTTGCATAGGGCGCGAAATTGACATACAATTTCGCGCC 68 TTerm_0405 NC_003197.2 4365643 4365653 11 4365658 4365668 11 4 100 0 22 36 63 36 63 0 4365655 GGCTGGTGACT AGTCACCAGCC True AGGCTGATG TTTTTGCGC False True + GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGC 68 STM4152 intergenic 4365603 4365911 + down GCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGAGCGTACGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTATCCATTTTCCGGTCAACAAAATAGTGTTGCACAAACTGTCCCCCGCAGGACAGATGGGTCGACTTGTCAGCGAGCTG TGGCGCTGAAGTTGAAGTTAAATAAGCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCCTTTTTGCGCTGTAAGGCGCCAGTAGCGTTTCACACTGTTTGACTACTGCTGTGCCTTTCAATGCTTGTTTCTATCGACGACTTAATATACTGCGACAGAGCGTACGTTCTGTGTAAATCGCAATGAAATGGTTTAAGCGTGATAGCAACAGGCATTGCGGAAAGTATCCATTTTCCGGTCAACAAAATAGTGTTGCACAAACTGTCCCCCGCAGGACAGATGGGTCGACTTGTCAGCGAGCTGAGGAACCCTATGGTTTACTCCTATA GCCAACCCTTCCGGTTGCAGCCTGAGAAATCAGGCTGATGGCTGGTGACTTTTTAGTCACCAGCC 65 TTerm_0406 NC_003197.2 4376556 4376562 7 4376568 4376574 7 5 100 0 14 100 0 100 0 0 4376564 ATTTAAT ATTAAAT True CTTAAATAA AACAATTTT False True + ATTTAAT TGGTT ATTAAAT AACAATTTT 28 STM4157 intergenic 4376373 4376696 + down CGGAAATGGCAATAATCATGCTATTGAATACATAAAATATTGGCATAAACTATCAAGTTTCGGCGAAAAATATTTGTTGCTCAGTTTTCTCTACTACAACGCCACTTTAAAATCGCAGTGCTGTTCAGAACGGAGATATACGGCATTCCTTGTGAAATATGGGAGTAAGAAGAGCTTAAATAATTTAATTGGTTATTAAATAACAATTTTATTTATACAGATATCTGTCAGATTACATCTGGCTTAAATTTTTGTCAGCCCAGATGCGTTTTCCATCAAGTAACGTTACCATCGGCGTCCGGCCGCAACACATTTTTCCCTGA TTCATGGGCGAGGCATGTGCAGTAGCGGAAATGGCAATAATCATGCTATTGAATACATAAAATATTGGCATAAACTATCAAGTTTCGGCGAAAAATATTTGTTGCTCAGTTTTCTCTACTACAACGCCACTTTAAAATCGCAGTGCTGTTCAGAACGGAGATATACGGCATTCCTTGTGAAATATGGGAGTAAGAAGAGCTTAAATAATTTAATTGGTTATTAAATAACAATTTTATTTATACAGATATCTGTCAGATTACATCTGGCTTAAATTTTTGTCAGCCCAGATGCGTTTTCCATCAAGTAACGTTACCATCGGCGTCCGGCCGCAACACATTTTTCCCTGATGGGTTCGCCCCTGATTCCCGTTGT CGGAAATGGCAATAATCATGCTATTGAATACATAAAATATTGGCATAAACTATCAAGTTTCGGCGAAAAATATTTGTTGCTCAGTTTTCTCTACTACAACGCCACTTTAAAATCGCAGTGCTGTTCAGAACGGAGATATACGGCATTCCTTGTGAAATATGGGAGTAAGAAGAGCTTAAATAATTTAATTGGTTATTAAAT 201 TTerm_0407 NC_003197.2 4399930 4399952 23 4399957 4399979 23 4 82 0 26 58 41 57 42 0 4399954 CAAATTAAGCAAAAGGCTCAGTC GACTGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True + CAAATTAAGCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TGGTCTGTC 84 STM4180 intergenic 4399931 4400260 + down AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACT GAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACTCACGGATAAATTAAATTCAATAATG AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTG 48 TTerm_0408 NC_003197.2 4399930 4399952 23 4399957 4399979 23 4 82 0 26 58 41 57 42 0 4399954 CAAATTAAGCAAAAGGCTCAGTC GACTGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True + CAAATTAAGCAAAAGGCTCAGTC GAAA GACTGGGCCTTTTGTTTTATCTG TGGTCTGTC 84 STM4181 intergenic 4399931 4400260 - down AGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATT CATTATTGAATTTAATTTATCCGTGAGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATTTGATGCCTGGCAGTTCCCTACTCTC AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTG 48 TTerm_0409 NC_003197.2 4400108 4400120 13 4400125 4400137 13 4 92 0 21 42 57 41 58 0 4400122 AAGAAGCCCGTCC GGACGGGCTTTTT True AACAAGTGA TGCGTGTGC False True + AAGAAGCCCGTCC GTCA GGACGGGCTTTTT TGCGTGTGC 82 STM4180 intergenic 4399931 4400260 + down AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACT GAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACTCACGGATAAATTAAATTCAATAATG AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTT 206 TTerm_0410 NC_003197.2 4400108 4400120 13 4400125 4400137 13 4 92 0 21 42 57 41 58 0 4400122 AAGAAGCCCGTCC GGACGGGCTTTTT True AACAAGTGA TGCGTGTGC False True + AAGAAGCCCGTCC GTCA GGACGGGCTTTTT TGCGTGTGC 82 STM4181 intergenic 4399931 4400260 - down AGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATT CATTATTGAATTTAATTTATCCGTGAGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATTTGATGCCTGGCAGTTCCCTACTCTC AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTT 206 TTerm_0411 NC_003197.2 4401828 4401834 7 4401839 4401845 7 4 100 0 14 28 71 28 71 0 4401836 AGGCACC GGTGCCT True GTTGAATCA TTTTTATTT False True + AGGCACC TTCG GGTGCCT TTTTTATTT 68 STM4182 intergenic 4401783 4401864 + down TCTTCTGCTTCTGACGATCCTAAAGCGTTTCAGCATGTTGAATCAGGCACCTTCGGGTGCCTTTTTTATTTCCGAAACGCA TCACATGAATCCAACCCTGGATTAATCTTCTGCTTCTGACGATCCTAAAGCGTTTCAGCATGTTGAATCAGGCACCTTCGGGTGCCTTTTTTATTTCCGAAACGCACCTCATCATGTAATTAAATTTAATT TCTTCTGCTTCTGACGATCCTAAAGCGTTTCAGCATGTTGAATCAGGCACCTTCGGGTGCCT 62 TTerm_0412 NC_003197.2 4441920 4441931 12 4441938 4441949 12 6 91 0 19 62 37 63 36 0 4441934 AAAAAGGCCGAT ATCGGCTTTTTT True AAGATAATA TATAAGATA True True + AAAAAGGCCGAT ATTCAC ATCGGCTTTTTT TATAAGATA 70 STM4221 intergenic 4441826 4442257 + down TGGCACTGCGCTTATCCGGTCTACGTAATGCATAGCGTCTGTAGGCCGGGTAAGGCGTTTCGCCGCCATCCGGCAAAAAGAGAATAAGATAATAAAAAGGCCGATATTCACATCGGCTTTTTTTATAAGATAATTCCGCTTGTCCGTCTTTATCCCCACAGTTTTATATTGAGCTTAATCCTAAAATAAGCAATAACCAGAAAATCACTCTGCGTTATTTTCAGATTATACGGATGCTGATGTCTTTTAGTTTAATTTTAACTTATTGATTTTATTTGTTTGTTAATTAAATAATGTAGGCGTTACTTCTTTAAAGTTTAATTATCCTAAAACTTCGATGTTATTTCTCCCGGACATAATCCGCCTGCTTTGGTTGTGTATACTCGGTAGCGCCCGAAATTCTTTTGGGTAAATCTCCATTCATTCAATGA CCGTTATAAAGCCTGGCGCGCCTGATGGCACTGCGCTTATCCGGTCTACGTAATGCATAGCGTCTGTAGGCCGGGTAAGGCGTTTCGCCGCCATCCGGCAAAAAGAGAATAAGATAATAAAAAGGCCGATATTCACATCGGCTTTTTTTATAAGATAATTCCGCTTGTCCGTCTTTATCCCCACAGTTTTATATTGAGCTTAATCCTAAAATAAGCAATAACCAGAAAATCACTCTGCGTTATTTTCAGATTATACGGATGCTGATGTCTTTTAGTTTAATTTTAACTTATTGATTTTATTTGTTTGTTAATTAAATAATGTAGGCGTTACTTCTTTAAAGTTTAATTATCCTAAAACTTCGATGTTATTTCTCCCGGACATAATCCGCCTGCTTTGGTTGTGTATACTCGGTAGCGCCCGAAATTCTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAGTTATGATGAAAAAAGTAC TGGCACTGCGCTTATCCGGTCTACGTAATGCATAGCGTCTGTAGGCCGGGTAAGGCGTTTCGCCGCCATCCGGCAAAAAGAGAATAAGATAATAAAAAGGCCGATATTCACATCGGCTTTTTT 123 TTerm_0413 NC_003197.2 4442530 4442539 10 4442544 4442553 10 4 100 0 20 60 40 60 40 0 4442541 ATAACCACAC GTGTGGTTAT True GTTTAACCA TTTGCCCCT False True + ATAACCACAC TCCG GTGTGGTTAT TTTGCCCCT 72 STM4222 intergenic 4442512 4442546 + down TATCGGTACGTTTAACCATAACCACACTCCGGTG CACCACGACCACCAGTACCCAGTAGTATCGGTACGTTTAACCATAACCACACTCCGGTGTGGTTATTTTGCCCCTCTGGAGAAG TATCGGTACGTTTAACCATAACCACACTCCGGTGTGGTTAT 41 TTerm_0414 NC_003197.2 4454567 4454572 6 4454581 4454586 6 8 100 0 12 16 83 16 83 0 4454576 GGTGCG CGCACC True CAGCAACTG TTTTTTTAT False True + GGTGCG TCTCCTGG CGCACC TTTTTTTAT 64 STM4232 intergenic 4454533 4454700 + down TTATTTCCCCACAGTGCTGATTTTGCAGCAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATCATTTCATGCGAATTGTTATTTTTTTGTTGCGCAACAGATCACTTAATTGTGATTGCGCCCCCCGTAATGTCTTTTCTGAGATACAATGACTTTAGGTTATGAAT CAGCAGTGTAAAAGGCAAGGGGTAATTATTTCCCCACAGTGCTGATTTTGCAGCAACTGGTGCGTCTCCTGGCGCACCTTTTTTTATCATTTCATGCGAATTGTTATTTTTTTGTTGCGCAACAGATCACTTAATTGTGATTGCGCCCCCCGTAATGTCTTTTCTGAGATACAATGACTTTAGGTTATGAATCGGAGAGTAAGGCATGTCACACCCT TTATTTCCCCACAGTGCTGATTTTGCAGCAACTGGTGCGTCTCCTGGCGCACC 53 TTerm_0415 NC_003197.2 4463924 4463929 6 4463938 4463943 6 8 100 0 12 50 50 50 50 0 4463933 GCGTTA TAACGC True CCGGTTTAG CCCTTTTTT False True + GCGTTA TGCTATAG TAACGC CCCTTTTTT 48 STM4242 intergenic 4463888 4463976 + down GGTGCTTTCACCGGAGGCGCTACGCCTCCGGTTTAGCGTTATGCTATAGTAACGCCCCTTTTTTAACCGGATGCTTATTTATTCGCCA CGCGCAGCTTACAATGACATTCTGAGGTGCTTTCACCGGAGGCGCTACGCCTCCGGTTTAGCGTTATGCTATAGTAACGCCCCTTTTTTAACCGGATGCTTATTTATTCGCCATGCAGCCTGAAACCCAGTCCTCCGC GGTGCTTTCACCGGAGGCGCTACGCCTCCGGTTTAGCGTTATGCTATAGTAACGC 55 TTerm_0416 NC_003197.2 4471418 4471425 8 4471431 4471438 8 5 100 0 16 37 62 37 62 0 4471427 AGGAGAGC GCTCTCCT True TAAAAATCA TTTTTGCAT True True + AGGAGAGC GACAG GCTCTCCT TTTTTGCAT 64 STM4249 intergenic 4471412 4471529 + down AAATCAGGAGAGCGACAGGCTCTCCTTTTTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTGTTTTTAGGA AGTCATTGTCAACTCGGAGTACTAAAAATCAGGAGAGCGACAGGCTCTCCTTTTTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTGTTTTTAGGAAGGAGCAGCCTATGTGGTATCAGCG AAATCAGGAGAGCGACAGGCTCTCCT 26 TTerm_0417 NC_003197.2 4501319 4501332 14 4501338 4501351 14 5 100 0 28 64 35 64 35 0 4501334 AAAAAAGACCCGTT AACGGGTCTTTTTT True TGCTTAATA GTCATTTAA True True + AAAAAAGACCCGTT GCACA AACGGGTCTTTTTT GTCATTTAA 88 STM4262 intergenic 4501275 4501553 + down AATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTTGTCATTTAACGAGTCGGCAACGTCTTCAATAAGTTTAGCTCGATTCTGTTAGGGCTATTCCACTTGCCATTTTTGGATAACCACACCTGGCGGCCCTCATCAACGGCAATGCGAGGGACGTGATGGTGCGCAAGGCTACCCCTGGCGCGCGATTCCGCGTTGAGATAACCGGTGGGCGGCTTCAGCGGCAGCGATAGCGTAT TTCTCCGGATAAATTATTAATGTAAAATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTTGTCATTTAACGAGTCGGCAACGTCTTCAATAAGTTTAGCTCGATTCTGTTAGGGCTATTCCACTTGCCATTTTTGGATAACCACACCTGGCGGCCCTCATCAACGGCAATGCGAGGGACGTGATGGTGCGCAAGGCTACCCCTGGCGCGCGATTCCGCGTTGAGATAACCGGTGGGCGGCTTCAGCGGCAGCGATAGCGTATCAGGTCAGCACCATCGGCCATTCTG AATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTT 76 TTerm_0418 NC_003197.2 4501319 4501332 14 4501338 4501351 14 5 100 0 28 64 35 64 35 0 4501334 AAAAAAGACCCGTT AACGGGTCTTTTTT True TGCTTAATA GTCATTTAA True True + AAAAAAGACCCGTT GCACA AACGGGTCTTTTTT GTCATTTAA 88 STM4263 intergenic 4501275 4501553 - down ATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTTTATTAAGCAGTACCACCTGATAACAGCGACAAGCGCTGCTTATT CAGAATGGCCGATGGTGCTGACCTGATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTTTATTAAGCAGTACCACCTGATAACAGCGACAAGCGCTGCTTATTTTACATTAATAATTTATCCGGAGAA AATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTT 76 TTerm_0419 NC_003197.2 4507529 4507540 12 4507545 4507556 12 4 100 0 24 33 66 33 66 0 4507542 AAAACGGGCGGC GCCGCCCGTTTT True CATTCTGAA CATTTTCAG True True + AAAACGGGCGGC GTTG GCCGCCCGTTTT CATTTTCAG 96 STM4268 intergenic 4507511 4507651 + down CTCTGCCTTCATTCTGAAAAACGGGCGGCGTTGGCCGCCCGTTTTCATTTTCAGGACACATCACGTTACCTTTTGCGTTAATCTGAAGAAGGTGAAACCGAGGCATGATGCCTCTCTCCATCATAAAAAACATCGCAAAC TTATGCCGGCGGCTGGGCTATCTAGCTCTGCCTTCATTCTGAAAAACGGGCGGCGTTGGCCGCCCGTTTTCATTTTCAGGACACATCACGTTACCTTTTGCGTTAATCTGAAGAAGGTGAAACCGAGGCATGATGCCTCTCTCCATCATAAAAAACATCGCAAACAGGGAACGCATGGAAATTTTCTTCA CTCTGCCTTCATTCTGAAAAACGGGCGGCGTTGGCCGCCCGTTTT 45 TTerm_0420 NC_003197.2 4541155 4541165 11 4541171 4541181 11 5 90 0 17 40 59 40 60 0 4541167 TTCACCTGCCG CGACAGGTGAA True TGAGCGATT TTATTTTTT False True + TTCACCTGCCG TTTAT CGACAGGTGAA TTATTTTTT 66 STM4297 intergenic 4540994 4541213 - down AAGCCGGATACCACTATCAGCCAAAAAAATAATTCACCTGTCGATAAACGGCAGGTGAAATCGCTCAATATCAATAATTAACCCATTGTTTATTAAACAATAATATCAATAACCGACCATTATTCCATCACTTTACACCCCCTATTTGACGGGGTAATACTTGCCCACGTCACATTCATACGGCGGGTCGGCAAGGCGTAAATTGCACGGCCTCCACAA AACGACGCCAGACGATGCCCGGCTAAAGCCGGATACCACTATCAGCCAAAAAAATAATTCACCTGTCGATAAACGGCAGGTGAAATCGCTCAATATCAATAATTAACCCATTGTTTATTAAACAATAATATCAATAACCGACCATTATTCCATCACTTTACACCCCCTATTTGACGGGGTAATACTTGCCCACGTCACATTCATACGGCGGGTCGGCAAGGCGTAAATTGCACGGCCTCCACAACCGGGTAAAAGATGATGAAAGTATT TTGTGGAGGCCGTGCAATTTACGCCTTGCCGACCCGCCGTATGAATGTGACGTGGGCAAGTATTACCCCGTCAAATAGGGGGTGTAAAGTGATGGAATAATGGTCGGTTATTGATATTATTGTTTAATAAACAATGGGTTAATTATTGATATTGAGCGATTTCACCTGCCGTTTATCGACAGGTGAA 187 TTerm_0421 NC_003197.2 4559262 4559268 7 4559275 4559281 7 6 100 0 14 14 85 14 85 0 4559271 GCGGCAG CTGCCGC True TCATATTTG TTTTTTTGT False True + GCGGCAG CGTAGT CTGCCGC TTTTTTTGT 68 STM4310 intergenic 4559093 4559289 + down AATCTATTTTTACTGTCACAGTATGCTAAAACAGAACAAGGTTATTAATACCATGATTTGACGACTGTTTGATTCGTTGATTCATTGTTGGGGATATTTATGTTTTACTTACCTCAGTAACGGATTACTTTGTGGTGTAGCGTAACGGTAATTGTCCTCCTCATATTTGCGGCAGCGTAGTCTGCCGCTTTTTTTG TTCGTGTGATATACAGAATGACTAAAATCTATTTTTACTGTCACAGTATGCTAAAACAGAACAAGGTTATTAATACCATGATTTGACGACTGTTTGATTCGTTGATTCATTGTTGGGGATATTTATGTTTTACTTACCTCAGTAACGGATTACTTTGTGGTGTAGCGTAACGGTAATTGTCCTCCTCATATTTGCGGCAGCGTAGTCTGCCGCTTTTTTTGTCTATGGAAAACCCCCAGCTAGGCT AATCTATTTTTACTGTCACAGTATGCTAAAACAGAACAAGGTTATTAATACCATGATTTGACGACTGTTTGATTCGTTGATTCATTGTTGGGGATATTTATGTTTTACTTACCTCAGTAACGGATTACTTTGTGGTGTAGCGTAACGGTAATTGTCCTCCTCATATTTGCGGCAGCGTAGTCTGCCGC 188 TTerm_0422 NC_003197.2 4561896 4561902 7 4561907 4561913 7 4 100 0 14 71 28 71 28 0 4561904 CATTTTC GAAAATG True GATCTTTTC CTATTTTAT False True + CATTTTC TATG GAAAATG CTATTTTAT 36 STM4316 intergenic 4561780 4562038 - down ATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGA AAAGATTAAAGGCAATTATTACTTAATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGAAATTATCATGCTAAAAGTATTTAAT TCCTTTTATTAAATGTGCGTGTAAATCAAAATTATTCTGAAAAATATTTCAAAAGAAAACTAATATATAGCTATATAATTATTTGCGAACTTAAGGTATCAGGTGGCGATCTTTTCATTTTCTATGGAAAATG 133 TTerm_0423 NC_003197.2 4576910 4576925 16 4576930 4576945 16 4 87 0 22 37 62 35 64 0 4576927 GAGAAACCCCCGGGCA TGACCGGGGGTTTTTC True CCAGAATTG TTTTAGTCA False True + GAGAAACCCCCGGGCA GAAA TGACCGGGGGTTTTTC TTTTAGTCA 76 STM4330 intergenic 4576773 4576999 + down TTGCCCACCCCCTGCATCCTTCAGGCTGCAGATGCGTTGGCTAACCCCAGTCACTTACTTGAGTAAGTGACTGGGGATTAACAAACTGGCCGCCTTCCTGCAACCAGAATGATTTGGGTGCTTATCTCCCAGAATTGAGAAACCCCCGGGCAGAAATGACCGGGGGTTTTTCTTTTAGTCATCTTTTTAGTATAAGATTCAGATACGGACAAAACGTCCAGCTCAT GGGTGGTATGGGCGGCATGATGTAATTGCCCACCCCCTGCATCCTTCAGGCTGCAGATGCGTTGGCTAACCCCAGTCACTTACTTGAGTAAGTGACTGGGGATTAACAAACTGGCCGCCTTCCTGCAACCAGAATGATTTGGGTGCTTATCTCCCAGAATTGAGAAACCCCCGGGCAGAAATGACCGGGGGTTTTTCTTTTAGTCATCTTTTTAGTATAAGATTCAGATACGGACAAAACGTCCAGCTCATTGATTATGGGGAATAACATGCACGT TTGCCCACCCCCTGCATCCTTCAGGCTGCAGATGCGTTGGCTAACCCCAGTCACTTACTTGAGTAAGTGACTGGGGATTAACAAACTGGCCGCCTTCCTGCAACCAGAATGATTTGGGTGCTTATCTCCCAGAATTGAGAAACCCCCGGGCAGAAATGACCGGGGGTTTTTC 172 TTerm_0424 NC_003197.2 4580644 4580655 12 4580665 4580676 12 9 91 0 19 54 45 54 45 0 4580659 ATCAACGGTACG CGTACCGTTAAT True CAGTAATCA CGATTTTCT False True + ATCAACGGTACG GCATGGCGT CGTACCGTTAAT CGATTTTCT 70 STM4336 intergenic 4580641 4580672 + down TCATCAACGGTACGGCATGGCGTCGTACCGT CGCTGCAACCAGAGCTCAGCAGTAATCATCAACGGTACGGCATGGCGTCGTACCGTTAATCGATTTTCTCCGGAAGCATAA TCATCAACGGTACGGCATGGCGTCGTACCGTTAAT 35 TTerm_0425 NC_003197.2 4580644 4580655 12 4580665 4580676 12 9 91 0 19 54 45 54 45 0 4580659 ATCAACGGTACG CGTACCGTTAAT True CAGTAATCA CGATTTTCT False True + ATCAACGGTACG GCATGGCGT CGTACCGTTAAT CGATTTTCT 70 STM4337 intergenic 4580641 4580672 - down ACGGTACGACGCCATGCCGTACCGTTGATGA TTATGCTTCCGGAGAAAATCGATTAACGGTACGACGCCATGCCGTACCGTTGATGATTACTGCTGAGCTCTGGTTGCAGCG TCATCAACGGTACGGCATGGCGTCGTACCGTTAAT 35 TTerm_0426 NC_003197.2 4587115 4587124 10 4587130 4587139 10 5 100 0 20 50 50 50 50 0 4587126 AAAATGGCGC GCGCCATTTT True CGCGAGATA GTAGCATAT True True + AAAATGGCGC AATAA GCGCCATTTT GTAGCATAT 80 STM4344 intergenic 4587088 4587301 + down ATCTGAAATTCACTCTTTCGCGAGATAAAATGGCGCAATAAGCGCCATTTTGTAGCATATTTTTTCAATTATCCTCTGTTTGCCACAACATAAGGCTGGAACTTTGATGCCATTTAGGTATCAATCCTGTGTTGATTTTTTTATCGCTGACCTTCGTAAAAAAGAAGGCGGCGTCAATCGGTGAGCGGCGTCTGGCAAACGCGCTCGAGCGTA TGCTTTTACGGTCGATCGGGCGTAAATCTGAAATTCACTCTTTCGCGAGATAAAATGGCGCAATAAGCGCCATTTTGTAGCATATTTTTTCAATTATCCTCTGTTTGCCACAACATAAGGCTGGAACTTTGATGCCATTTAGGTATCAATCCTGTGTTGATTTTTTTATCGCTGACCTTCGTAAAAAAGAAGGCGGCGTCAATCGGTGAGCGGCGTCTGGCAAACGCGCTCGAGCGTAAGGGATGGTTGAATGACCCACACGA ATCTGAAATTCACTCTTTCGCGAGATAAAATGGCGCAATAAGCGCCATTTT 51 TTerm_0427 NC_003197.2 4596999 4597006 8 4597014 4597021 8 7 87 0 11 31 68 28 71 0 4597009 CCACAACG CGTTGGGG True AAAATTATC CACGTTTTG True True + CCACAACG AATATCG CGTTGGGG CACGTTTTG 54 STM4354 intergenic 4596964 4597245 + down TTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATT TCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATTCAGGCATCGCGCACCAGCCCTTTTT TTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGG 57 TTerm_0428 NC_003197.2 4596999 4597006 8 4597014 4597021 8 7 87 0 11 31 68 28 71 0 4597009 CCACAACG CGTTGGGG True AAAATTATC CACGTTTTG True True + CCACAACG AATATCG CGTTGGGG CACGTTTTG 54 STM4355 intergenic 4596964 4597245 - down AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAA AAAAAGGGCTGGTGCGCGATGCCTGAATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGA TTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGG 57 TTerm_0429 NC_003197.2 4614356 4614371 16 4614378 4614393 16 6 93 0 27 71 28 73 26 0 4614374 TAAGAAAAAACCATCC GGATGGTTTTTTTTTA True GTATTTTTT TCTTTGACT True True + TAAGAAAAAACCATCC ATAATC GGATGGTTTTTTTTTA TCTTTGACT 86 STM4369 intergenic 4614339 4614460 + down TGCTGATAGTATTTTTTAAGAAAAAACCATCCATAATCGGATGGTTTTTTTTTATCTTTGACTGGTAATATAAAAAACAAAACCTACCCTGTAATTTCTTTTATTTATAAAAATGAGATAG TGAAGCCGTTCGCCAGCGCACCTGATGCTGATAGTATTTTTTAAGAAAAAACCATCCATAATCGGATGGTTTTTTTTTATCTTTGACTGGTAATATAAAAAACAAAACCTACCCTGTAATTTCTTTTATTTATAAAAATGAGATAGAGATAAAAATATGGCATGGACTCCA TGCTGATAGTATTTTTTAAGAAAAAACCATCCATAATCGGATGGTTTTTTTTTA 54 TTerm_0430 NC_003197.2 4631997 4632006 10 4632012 4632021 10 5 100 0 20 40 60 40 60 0 4632008 AAACGTCGGC GCCGACGTTT True TAGCAACGA TGCTTTTTT False True + AAACGTCGGC CCAGC GCCGACGTTT TGCTTTTTT 80 STM4394 intergenic 4631968 4632105 + down TCAGGCATTCTCGTTTTTGCTAGCAACGAAACGTCGGCCCAGCGCCGACGTTTTGCTTTTTTAACCCCATCGCTTTTCGACTGGCTATCTCCCCCTCTTTTCGCGATAATCAAAAATAAAACATTATTTTAATTTCT TATCATCAACGTGGTTGCTGAGTAATCAGGCATTCTCGTTTTTGCTAGCAACGAAACGTCGGCCCAGCGCCGACGTTTTGCTTTTTTAACCCCATCGCTTTTCGACTGGCTATCTCCCCCTCTTTTCGCGATAATCAAAAATAAAACATTATTTTAATTTCTTGGTGAAAGAATGGATACCCAACGC TCAGGCATTCTCGTTTTTGCTAGCAACGAAACGTCGGCCCAGCGCCGACGTTT 53 TTerm_0431 NC_003197.2 4658079 4658087 9 4658092 4658100 9 4 100 0 18 22 77 22 77 0 4658089 CAGCCAGCC GGCTGGCTG True TATGCGGTC TTTTATATG False True + CAGCCAGCC TTGT GGCTGGCTG TTTTATATG 76 STM4416 intergenic 4658065 4658556 + down ATGACTATGCGGTCAGCCAGCCTTGTGGCTGGCTGTTTTATATGGGGCATCTTGCCATCGAAAGCGCATTCCGCTCGCCGGGAGACGTTAAAGCAATACTGAAAAATCATTTGCCGCTCAGTATTGAAAAAGAGTAGACGCATATCCTTAAAGTAATCAGTGTAATACACTAAGAGTGTTCCGCCGGTTGCCGTATGCGGGACGAAAAGAGCCAGTTCGCAATAACAGATGAAGGTTTCGTGATTTATAAACGTCATCTTCTGCCTTTCAACGTTTGCGATGCCGCCTGGCTGCGGGCATCGTCCAGTCATAACAATGCTGATCCTGTCGCATTTATGCGGTCAGATTCAGATTGCTCAGAACCCAGCCCGCCAGCAAATTCTGTACTGAAGGTAACCACAGCGCAATTTGAATGTTGTTAACTGTATGTTCAGTTCATTTGTGCTAATATGGTTATTTACGAAATTTTCGTTCTATTAGAGTATCATGCA AGCTCAGAACGTAACAGCGTATTAAATGACTATGCGGTCAGCCAGCCTTGTGGCTGGCTGTTTTATATGGGGCATCTTGCCATCGAAAGCGCATTCCGCTCGCCGGGAGACGTTAAAGCAATACTGAAAAATCATTTGCCGCTCAGTATTGAAAAAGAGTAGACGCATATCCTTAAAGTAATCAGTGTAATACACTAAGAGTGTTCCGCCGGTTGCCGTATGCGGGACGAAAAGAGCCAGTTCGCAATAACAGATGAAGGTTTCGTGATTTATAAACGTCATCTTCTGCCTTTCAACGTTTGCGATGCCGCCTGGCTGCGGGCATCGTCCAGTCATAACAATGCTGATCCTGTCGCATTTATGCGGTCAGATTCAGATTGCTCAGAACCCAGCCCGCCAGCAAATTCTGTACTGAAGGTAACCACAGCGCAATTTGAATGTTGTTAACTGTATGTTCAGTTCATTTGTGCTAATATGGTTATTTACGAAATTTTCGTTCTATTAGAGTATCATGCATGTCTAAACATCAAACTCAACTTTC ATGACTATGCGGTCAGCCAGCCTTGTGGCTGGCTG 35 TTerm_0432 NC_003197.2 4666753 4666762 10 4666767 4666776 10 4 90 0 15 45 55 44 55 0 4666764 AATGGTCGCA TGCGGCCATT True GTCATGAGA TTTTATTTG False True + AATGGTCGCA ATAC TGCGGCCATT TTTTATTTG 70 STM4423 intergenic 4666725 4666985 + down TGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATTTTTTATTTGTCGGTATATTTTATGCGTTTATCTATAGCGCGAAAAGTCTGGCAATATCATTAAAGAGTGATGATTTTTTTGTGATACCTGACGCATTTATCCCACTTCTTCAACCAGGATAGATAAAGTTTTTCAGGCTACAAAAAGTAATATGTTGTCCATCAAAGGTTAATTTGCATCGCGGTATGCAGTAAAAGCGTTTCATTAAG TAATTATTTATTATTTGAATATTAATGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATTTTTTATTTGTCGGTATATTTTATGCGTTTATCTATAGCGCGAAAAGTCTGGCAATATCATTAAAGAGTGATGATTTTTTTGTGATACCTGACGCATTTATCCCACTTCTTCAACCAGGATAGATAAAGTTTTTCAGGCTACAAAAAGTAATATGTTGTCCATCAAAGGTTAATTTGCATCGCGGTATGCAGTAAAAGCGTTTCATTAAGTGGGAGCCAGCAATATGTACAATGT TGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATT 51 TTerm_0433 NC_003197.2 4666829 4666836 8 4666846 4666853 8 9 87 0 11 87 12 85 14 0 4666840 AATATCAT ATGATTTT True AGTCTGGCA TTTGTGATA False True + AATATCAT TAAAGAGTG ATGATTTT TTTGTGATA 30 STM4423 intergenic 4666725 4666985 + down TGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATTTTTTATTTGTCGGTATATTTTATGCGTTTATCTATAGCGCGAAAAGTCTGGCAATATCATTAAAGAGTGATGATTTTTTTGTGATACCTGACGCATTTATCCCACTTCTTCAACCAGGATAGATAAAGTTTTTCAGGCTACAAAAAGTAATATGTTGTCCATCAAAGGTTAATTTGCATCGCGGTATGCAGTAAAAGCGTTTCATTAAG TAATTATTTATTATTTGAATATTAATGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATTTTTTATTTGTCGGTATATTTTATGCGTTTATCTATAGCGCGAAAAGTCTGGCAATATCATTAAAGAGTGATGATTTTTTTGTGATACCTGACGCATTTATCCCACTTCTTCAACCAGGATAGATAAAGTTTTTCAGGCTACAAAAAGTAATATGTTGTCCATCAAAGGTTAATTTGCATCGCGGTATGCAGTAAAAGCGTTTCATTAAGTGGGAGCCAGCAATATGTACAATGT TGCTTGCTAAAATTTAATCGTCATGAGAATGGTCGCAATACTGCGGCCATTTTTTATTTGTCGGTATATTTTATGCGTTTATCTATAGCGCGAAAAGTCTGGCAATATCATTAAAGAGTGATGATTTT 128 TTerm_0434 NC_003197.2 4676793 4676810 18 4676820 4676837 18 9 77 0 16 69 30 78 21 0 4676814 AACGCATTGTTTGCTTTT AAAATAAAACGATCCGTT True ACAGCGTCA TTTCGCAGA False True + AACGCATTGTTTGCTTTT CAGAACGGC AAAATAAAACGATCCGTT TTTCGCAGA 32 STM4432 intergenic 4676726 4676901 + down TTAATTTGCCGTCGTTCAGGTTGCAGAAGTGTGGTTATTGTTCTGCAACCTGAACGATACAGCGTCAACGCATTGTTTGCTTTTCAGAACGGCAAAATAAAACGATCCGTTTTTCGCAGAACTACGGATGCTTTTCTTTTGCGGTTTTAAATTTACTATTCATGAGATTAAGAGG TATCGGACAGGCCCGGCAGTACTGATTAATTTGCCGTCGTTCAGGTTGCAGAAGTGTGGTTATTGTTCTGCAACCTGAACGATACAGCGTCAACGCATTGTTTGCTTTTCAGAACGGCAAAATAAAACGATCCGTTTTTCGCAGAACTACGGATGCTTTTCTTTTGCGGTTTTAAATTTACTATTCATGAGATTAAGAGGTACGAATGAAAAAGCTTCGATGTGG TTAATTTGCCGTCGTTCAGGTTGCAGAAGTGTGGTTATTGTTCTGCAACCTGAACGATACAGCGTCAACGCATTGTTTGCTTTTCAGAACGGCAAAATAAAACGATCCGTT 111 TTerm_0435 NC_003197.2 4677951 4677963 13 4677968 4677980 13 4 84 0 16 53 46 54 45 0 4677965 AAACTCTCGCACT AGTGTGAGAGCTT True TAATGAAGA TTCTATACC False True + AAACTCTCGCACT GAAA AGTGTGAGAGCTT TTCTATACC 56 STM4433 intergenic 4677929 4677995 + down CTGCATCTATTAATAATGAAGAAACTCTCGCACTGAAAAGTGTGAGAGCTTTTCTATACCGAGGAT AATAACAAGCGATATTTATCTTTAACTGCATCTATTAATAATGAAGAAACTCTCGCACTGAAAAGTGTGAGAGCTTTTCTATACCGAGGATAATAAAATGAAAGAAATGCAGGCAA CTGCATCTATTAATAATGAAGAAACTCTCGCACTGAAAAGTGTGAGAGCTT 51 TTerm_0436 NC_003197.2 4705702 4705707 6 4705713 4705718 6 5 100 0 12 50 50 50 50 0 4705709 CGATTG CAATCG True TGTCACATC GGCGGTTTT False True + CGATTG CGGAT CAATCG GGCGGTTTT 48 STM4464 intergenic 4705644 4705825 - down ACGAGCCAGATGGCGACGCGTCTTATCTGACAGGACTGATAAGCACAGCGCCATCAGGCACGCCGTCACCTTTTTTGATCGGCTTCTCATTTTCCTGCAAAACCGCCCGATTGATCCGCAATCGATGTGACAAATGTGATGAATTTCGCCAGTCCGTTGATATCAATAATAAAGATAAGGT TACTGAGCATCGGAGCGATGATGTAACGAGCCAGATGGCGACGCGTCTTATCTGACAGGACTGATAAGCACAGCGCCATCAGGCACGCCGTCACCTTTTTTGATCGGCTTCTCATTTTCCTGCAAAACCGCCCGATTGATCCGCAATCGATGTGACAAATGTGATGAATTTCGCCAGTCCGTTGATATCAATAATAAAGATAAGGTGCATTTATGAAGGAATACGATGATT ACCTTATCTTTATTATTGATATCAACGGACTGGCGAAATTCATCACATTTGTCACATCGATTGCGGATCAATCG 74 TTerm_0437 NC_003197.2 4731207 4731214 8 4731220 4731227 8 5 87 0 11 87 12 85 14 0 4731216 ATTTTTCT AGAAATAT True GATAATTTA TTATTTTGT False True + ATTTTTCT GTAAT AGAAATAT TTATTTTGT 30 STM4487 intergenic 4731095 4731324 + down GTCCGGCCTTCGGCACCAAGTGATGCAATAATTAGCTGCCTAATGGTGGCTTTTTTTGTGTCCATTTCCGTCCAAATTCGTCCATATCCATCTGTAATTCAAAGATAATTTATTTTTCTGTAATAGAAATATTTATTTTGTGGTCTTTCCGTGTTGGTCGTTTTTCATCCATTAACATCCACGCGATCTGGGGGCAAAAAGGGGCAAACCCGGTTCGATAGAGGAGTGC ACCGTAGAAATACGTGCCGGTTCGAGTCCGGCCTTCGGCACCAAGTGATGCAATAATTAGCTGCCTAATGGTGGCTTTTTTTGTGTCCATTTCCGTCCAAATTCGTCCATATCCATCTGTAATTCAAAGATAATTTATTTTTCTGTAATAGAAATATTTATTTTGTGGTCTTTCCGTGTTGGTCGTTTTTCATCCATTAACATCCACGCGATCTGGGGGCAAAAAGGGGCAAACCCGGTTCGATAGAGGAGTGCCCCCCAAATGGCGCTTACAGATCTC GTCCGGCCTTCGGCACCAAGTGATGCAATAATTAGCTGCCTAATGGTGGCTTTTTTTGTGTCCATTTCCGTCCAAATTCGTCCATATCCATCTGTAATTCAAAGATAATTTATTTTTCTGTAATAGAAATAT 132 TTerm_0438 NC_003197.2 4759437 4759448 12 4759456 4759467 12 7 83 0 14 41 58 40 60 0 4759451 CAGACGTCGGAA TTCTGCCGTCTG True AATTTGTTC TTTTTTTAG False True + CAGACGTCGGAA TTTTTTG TTCTGCCGTCTG TTTTTTTAG 52 STM4504 intergenic 4759383 4759582 + down TAATGATCGCGCTGTCGCTCAGTCAGACTGGATCATCGTTATTTAAATTTGTTCAGACGTCGGAATTTTTTGTTCTGCCGTCTGTTTTTTTAGTGATGAGCTGTTCAGTGCAATAATAAGGGGTACAGTACGATGACTGATTTTTAAACTGCATATCATCTGTGTCGCATTTACTCATGGGTATTGGGTCAGGGAGAGA TGAAGAAGACAGTGTCGCGCCATAATAATGATCGCGCTGTCGCTCAGTCAGACTGGATCATCGTTATTTAAATTTGTTCAGACGTCGGAATTTTTTGTTCTGCCGTCTGTTTTTTTAGTGATGAGCTGTTCAGTGCAATAATAAGGGGTACAGTACGATGACTGATTTTTAAACTGCATATCATCTGTGTCGCATTTACTCATGGGTATTGGGTCAGGGAGAGAGAAGAATGAGCACTATTTTAAAGCC TAATGATCGCGCTGTCGCTCAGTCAGACTGGATCATCGTTATTTAAATTTGTTCAGACGTCGGAATTTTTTGTTCTGCCGTCTG 84 TTerm_0439 NC_003197.2 4764220 4764229 10 4764237 4764246 10 7 90 0 15 50 50 55 44 0 4764232 ATAACGCGTG CACCCGTTAT True AAAAGGCGA GATTTTTAC True True + ATAACGCGTG GCCCTTA CACCCGTTAT GATTTTTAC 70 STM4509 intergenic 4764105 4764340 + down GGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAGCGCTCATGTAACCAATCGATTGCCTGAAAAGGCGATAACGCGTGGCCCTTACACCCGTTATGATTTTTACGCATAGCCGCTAATAAAACGGCATTTTTTATATACACATCAAGTTGATAGTGTGTTTCTGACCTTGACGTAAATAAGCGGGAAAA TCACCGACAGGCGCTGTGGCGATGAGGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAGCGCTCATGTAACCAATCGATTGCCTGAAAAGGCGATAACGCGTGGCCCTTACACCCGTTATGATTTTTACGCATAGCCGCTAATAAAACGGCATTTTTTATATACACATCAAGTTGATAGTGTGTTTCTGACCTTGACGTAAATAAGCGGGAAAAGCGATGAAACACACCATTGGGATAC GGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAGCGCTCATGTAACCAATCGATTGCCTGAAAAGGCGATAACGCGTGGCCCTTACACCCGTTAT 141 TTerm_0440 NC_003197.2 4775855 4775861 7 4775871 4775877 7 9 100 0 14 14 85 14 85 0 4775865 GCCCCTC GAGGGGC True TCCCTGTTG CTGGCTTTT False True + GCCCCTC TGAAATCGG GAGGGGC CTGGCTTTT 68 STM4519 intergenic 4775846 4775941 + down TCCCTGTTGCCCCTCTGAAATCGGGAGGGGCCTGGCTTTTTGCAGCGAAGGACGCGGATCTTAAATCAGAACGAAATAAGCGAACAAAACCCCCT GAAGCTGGTAGTGGTGCGCCGCTAATCCCTGTTGCCCCTCTGAAATCGGGAGGGGCCTGGCTTTTTGCAGCGAAGGACGCGGATCTTAAATCAGAACGAAATAAGCGAACAAAACCCCCTCAATTGCCCTCCTTATTTATCCACG TCCCTGTTGCCCCTCTGAAATCGGGAGGGGC 31 TTerm_0441 NC_003197.2 4775855 4775861 7 4775871 4775877 7 9 100 0 14 14 85 14 85 0 4775865 GCCCCTC GAGGGGC True TCCCTGTTG CTGGCTTTT False True + GCCCCTC TGAAATCGG GAGGGGC CTGGCTTTT 68 STM4520 intergenic 4775846 4775941 - down AGGGGGTTTTGTTCGCTTATTTCGTTCTGATTTAAGATCCGCGTCCTTCGCTGCAAAAAGCCAGGCCCCTCCCGATTTCAGAGGGGCAACAGGGA CGTGGATAAATAAGGAGGGCAATTGAGGGGGTTTTGTTCGCTTATTTCGTTCTGATTTAAGATCCGCGTCCTTCGCTGCAAAAAGCCAGGCCCCTCCCGATTTCAGAGGGGCAACAGGGATTAGCGGCGCACCACTACCAGCTTC TCCCTGTTGCCCCTCTGAAATCGGGAGGGGC 31 TTerm_0442 NC_003197.2 4777027 4777036 10 4777044 4777053 10 7 100 0 20 50 50 50 50 0 4777039 AAGCTGGCAA TTGCCAGCTT True TATAATTAA ATTTTATGC False True + AAGCTGGCAA GGGTTCT TTGCCAGCTT ATTTTATGC 64 STM4523 intergenic 4776998 4777065 - down AACGCATAAAATAAGCTGGCAAAGAACCCTTGCCAGCTTTAATTATAATTCATATCAATGAGTGAAG TCGACGTGATGGCAGGTTCTAAGTAAACGCATAAAATAAGCTGGCAAAGAACCCTTGCCAGCTTTAATTATAATTCATATCAATGAGTGAAGGAAAATCATGCGGCTAAAAGTAAAA CTTCACTCATTGATATGAATTATAATTAAAGCTGGCAAGGGTTCTTTGCCAGCTT 55 TTerm_0443 NC_003197.2 4825059 4825065 7 4825071 4825077 7 5 100 0 14 71 28 71 28 0 4825067 GAAATAC GTATTTC True TACAACGCG ACTGTTTTG False True + GAAATAC TTAGG GTATTTC ACTGTTTTG 36 STM4569 intergenic 4824949 4825146 + down TACCTGTTGTCTTTCGCGCTGTAGATGCGTTGACTTCATTCGCTCACCCCGGTCACATAGTTAATCTATGCTCCCGGGGATTCACGAATTCGTCGCCTTCCTACAACGCGAAATACTTAGGGTATTTCACTGTTTTGACACACGTTTTGTAGGCCTGATAAGGCGTAGCCGCCATCAGGCAATAACAACAAATTTAA GGACTACGGTAAAAACATGCTGTGATACCTGTTGTCTTTCGCGCTGTAGATGCGTTGACTTCATTCGCTCACCCCGGTCACATAGTTAATCTATGCTCCCGGGGATTCACGAATTCGTCGCCTTCCTACAACGCGAAATACTTAGGGTATTTCACTGTTTTGACACACGTTTTGTAGGCCTGATAAGGCGTAGCCGCCATCAGGCAATAACAACAAATTTAAAGGGAACTGAAGATGGCAACTCCAC TACCTGTTGTCTTTCGCGCTGTAGATGCGTTGACTTCATTCGCTCACCCCGGTCACATAGTTAATCTATGCTCCCGGGGATTCACGAATTCGTCGCCTTCCTACAACGCGAAATACTTAGGGTATTTC 128 TTerm_0444 NC_003197.2 4829634 4829647 14 4829656 4829669 14 8 92 0 23 53 46 53 46 0 4829651 TTAATCTGTCTCCC GGGAGACAGATCAA True CTTTAATTT TAACCTTTT False True + TTAATCTGTCTCCC CATAATAA GGGAGACAGATCAA TAACCTTTT 78 STM4574 intergenic 4829628 4829692 - down ATCCAGACCGTGTAAAAAGGTTATTGATCTGTCTCCCTTATTATGGGGAGACAGATTAAAATTA CAACCATCACGCTTAAATATCTCTGATCCAGACCGTGTAAAAAGGTTATTGATCTGTCTCCCTTATTATGGGGAGACAGATTAAAATTAAAGGACTAATTCTGATGCCAGCAGT TAATTTTAATCTGTCTCCCCATAATAAGGGAGACAGATCAA 41 TTerm_0445 NC_003197.2 4855331 4855344 14 4855350 4855363 14 5 92 0 23 53 46 53 46 0 4855346 AAACAGCCAGTAAG CTTACCGGCTGTTT True GACATAAGA TTACAGTTT False True + AAACAGCCAGTAAG AATAA CTTACCGGCTGTTT TTACAGTTT 70 STM4598 intergenic 4855127 4855388 - down ATTCGGCCCAGGCGCCAAACTGTAAAAACAGCCGGTAAGTTATTCTTACTGGCTGTTTCTTATGTCCCCCTTCCGCTAAGCGGCCTCGCTTTCCCTCCTGACCTGCCGTTATGACGTACTCTTTTACATAAAAATTGTCGTATAGCGCTGTTTATCTCAGCTTGCGAAAGTTAAGGTAGTTTGTGTATTTACATTAAAGAGTAATACACGGGATTTGTTAGTCCCCAAAAAATAAGGGGATGCTCACAGGACGTGAGGTTT GCTTCTGCGGCGACCTGCAGGATTAATTCGGCCCAGGCGCCAAACTGTAAAAACAGCCGGTAAGTTATTCTTACTGGCTGTTTCTTATGTCCCCCTTCCGCTAAGCGGCCTCGCTTTCCCTCCTGACCTGCCGTTATGACGTACTCTTTTACATAAAAATTGTCGTATAGCGCTGTTTATCTCAGCTTGCGAAAGTTAAGGTAGTTTGTGTATTTACATTAAAGAGTAATACACGGGATTTGTTAGTCCCCAAAAAATAAGGGGATGCTCACAGGACGTGAGGTTTCAAAGGATGAAAAAATCACCATTAT AAACCTCACGTCCTGTGAGCATCCCCTTATTTTTTGGGGACTAACAAATCCCGTGTATTACTCTTTAATGTAAATACACAAACTACCTTAACTTTCGCAAGCTGAGATAAACAGCGCTATACGACAATTTTTATGTAAAAGAGTACGTCATAACGGCAGGTCAGGAGGGAAAGCGAGGCCGCTTAGCGGAAGGGGGACATAAGAAACAGCCAGTAAGAATAACTTACCGGCTGTTT 236 TTerm_0446 NC_003277.2 26949 26957 9 26962 26970 9 4 88 0 13 94 5 100 0 0 26959 AAAACATTA TAATATTTT True CATATTACA TCAAAAAAC True True + AAAACATTA AATA TAATATTTT TCAAAAAAC 26 PSLT038 intergenic 26917 27178 - down AGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACT CGTTTTATCGTTTGATGACAGAGTAAGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACTATGAGAGTTTCTGGTAGTGCGTCAT AGTTACACTACCTCAATAAAATGCATATTACAAAACATTAAATATAATATTTT 53 TTerm_0447 NC_003277.2 29977 29985 9 29990 29998 9 4 88 0 13 27 72 25 75 0 29987 CTGGCCGTC GATGGCCAG True TCCTGAAAC GTATATTTT False True + CTGGCCGTC TGAC GATGGCCAG GTATATTTT 58 PSLT040 intergenic 29960 30142 - down GCTTCCCGCGCTACCAGAGTAGTGAGCAGCAGACCATTCTGCAGAATCTGAGCGACGTCATTGTTCAGGTGCATTCTACCGCGCTGTACGGCGGCAGCACTTTTGAACAGGCCGTAGAGCAGACGCTGTAAGCAGAAAATATACCTGGCCATCGTCAGACGGCCAGTTTCAGGAGATAGTGT ACTCTGCGTGCCAGCCGGCAGTTTAGCTTCCCGCGCTACCAGAGTAGTGAGCAGCAGACCATTCTGCAGAATCTGAGCGACGTCATTGTTCAGGTGCATTCTACCGCGCTGTACGGCGGCAGCACTTTTGAACAGGCCGTAGAGCAGACGCTGTAAGCAGAAAATATACCTGGCCATCGTCAGACGGCCAGTTTCAGGAGATAGTGTATGTTGATACTAAATGGTTTTTCAT ACACTATCTCCTGAAACTGGCCGTCTGACGATGGCCAG 38 TTerm_0448 NC_003277.2 54169 54183 15 54192 54206 15 8 93 0 25 60 40 64 35 0 54187 CAAAACTTTTTGCCG CGGCAAAAACTTTTG True ACAGCCCAC CGTTCTGCC True True + CAAAACTTTTTGCCG TAAAAGGC CGGCAAAAACTTTTG CGTTCTGCC 82 PSLT065 intergenic 54186 54395 + down AAGGCCGGCAAAAACTTTTGCGTTCTGCCCCGGACAGGTGCGTCGGGCCGTGGCAGTGATGCCCCTTGCGGCGAAGGTTCTCAAACGGGTGATGGCAGTACCAGAGGGAACAGAACAGCAGGTCCCCGCAAAACGTCAAAACCGCGGCTCCCGAAACTCAACGGGTGATGGTTTTTAAAGTCAAAACAACGCATTAAGGAGATTTATCA CAGCCCACAAAACTTTTTGCCGTAAAAGGCCGGCAAAAACTTTTGCGTTCTGCCCCGGACAGGTGCGTCGGGCCGTGGCAGTGATGCCCCTTGCGGCGAAGGTTCTCAAACGGGTGATGGCAGTACCAGAGGGAACAGAACAGCAGGTCCCCGCAAAACGTCAAAACCGCGGCTCCCGAAACTCAACGGGTGATGGTTTTTAAAGTCAAAACAACGCATTAAGGAGATTTATCATGGCAGCACGTGGCGTAAACAAAGT AAGGCCGGCAAAAACTTTTG 20 TTerm_0449 NC_003197.2 274 287 14 295 308 14 7 100 0 28 50 50 50 50 0 290 AAAAAAGCCCGCAC GTGCGGGCTTTTTT True AAACACAGA TTCGACCAG True True - AAAAAAGCCCGCAC TGTTCAG GTGCGGGCTTTTTT TCTGTGTTT 96 STM0001 intergenic 255 325 + down CGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGGGCTTTTTTTTCGACCAGAGATCACG TACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAACACAGAAAAAAGCCCGCACCTGAACAGTGCGGGCTTTTTTTTCGACCAGAGATCACGAGGTAACAACCATGCGAGTGTTGAA CGTGATCTCTGGTCGAAAAAAAAGCCCGCACTGTTCAGGTGCGGGCTTTTT 51 TTerm_0450 NC_003197.2 24387 24396 10 24401 24410 10 4 90 0 15 75 25 77 22 0 24398 TGATATTGCT AGAAATATCA True AAAAGTCGT GCAGCCGTT True False - TGATATTTCT TCAC AGCAATATCA ACGACTTTT 38 STM0020 intergenic 24039 24462 + down TGCACTATCCGCAACGATATATTTACATATCTCGACTGAATTTGCCTGGTATCGTTAATAGAATGTTTTACTGAAGGTTGTTATGAAAGCTATTTTTAAAAAGTCAATATGGCTAAAGGAGATAGGCCGAACGACTGGTGTAAAGTTAATATAAAACAACAGGTTATGCCTGGTCCTATAAAACCAAATGTCGATGATTGCAACTTGCCGTTGGCTTGCTAATAATTAATAACATCGTTATCTCATTATAACGTAAAGATAAACTCACGACGTTGAGTGGCTGTTTTATTGCTTCTGACATTTATATCAGAACAAGAAGACACTTTTTTTCGCATAAGAAAAAGTCGTGATATTGCTGTGAAGAAATATCAGCAGCCGTTTCGTTAAAAAATCTGATTACCCTTATTTTTATATTTAAAAGGA CGGAAAACTGCCAGTGGCGTATTAATGCACTATCCGCAACGATATATTTACATATCTCGACTGAATTTGCCTGGTATCGTTAATAGAATGTTTTACTGAAGGTTGTTATGAAAGCTATTTTTAAAAAGTCAATATGGCTAAAGGAGATAGGCCGAACGACTGGTGTAAAGTTAATATAAAACAACAGGTTATGCCTGGTCCTATAAAACCAAATGTCGATGATTGCAACTTGCCGTTGGCTTGCTAATAATTAATAACATCGTTATCTCATTATAACGTAAAGATAAACTCACGACGTTGAGTGGCTGTTTTATTGCTTCTGACATTTATATCAGAACAAGAAGACACTTTTTTTCGCATAAGAAAAAGTCGTGATATTGCTGTGAAGAAATATCAGCAGCCGTTTCGTTAAAAAATCTGATTACCCTTATTTTTATATTTAAAAGGAGCTTGAATGAAAAAGCCTGTACTAG TCCTTTTAAATATAAAAATAAGGGTAATCAGATTTTTTAACGAAACGGCTGCTGATATTTCTTCACAGCAATATC 75 TTerm_0451 NC_003197.2 46060 46066 7 46075 46081 7 8 100 0 14 42 57 42 57 0 46070 AAGTCCG CGGACTT True CACTAAAAA CATTTCGTA True False - AAGTCCG ACTTACGC CGGACTT TTTTTAGTG 60 STM0038 intergenic 46027 46083 + down CGGTCTATCATCAATGACTGACTGCACTAAAAAAGTCCGGCGTAAGTCGGACTTCA GTATAAAATGGATCTGTACGCGTAGCGGTCTATCATCAATGACTGACTGCACTAAAAAAGTCCGGCGTAAGTCGGACTTCATTTCGTAAAAAACGAGCTATTCATC TGAAGTCCGACTTACGCCGGACT 23 TTerm_0452 NC_003197.2 52096 52101 6 52109 52114 6 7 100 0 12 66 33 66 33 0 52104 TGAAAG CTTTCA True GAAAACAGT AGTATTACG True False - TGAAAG TTATTTT CTTTCA ACTGTTTTC 40 STM0043 intergenic 51829 52280 - down ATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTA CTGCACAGATCAACAAACTGGCTTAATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTATCATTATGAGTTCTGTCATTGAGGA ATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTC 184 TTerm_0453 NC_003197.2 52226 52238 13 52244 52256 13 5 92 0 21 57 42 58 41 0 52240 TAAAAAAACCCGC GCGGGTTTTTCTA True AGCAGGCAT CAAAGCTGA True True - TAGAAAAACCCGC GTAAA GCGGGTTTTTTTA ATGCCTGCT 82 STM0043 intergenic 51829 52280 - down ATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTA CTGCACAGATCAACAAACTGGCTTAATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTTATGCCTGCTATCTGCCGTTTTGCTCGACAACCGCTGGCTCTGACCTCACTCGTTCACGCTCTTCCTGACCAGCCTATTTTTTCAGCTACCCCTCCCTTAGTCACGTAATACTTGAAAGTTATTTTCTTTCACTGTTTTCCTTTTCTTATTTCATTACTGAAAAAACTGTGACCACCTTAGCAAATAAAAACATCGCTCATTCAAAAACTAATAAACGCAATCCTGATGTAAGATTTAATAATTGATTGATGCCGTCGGGTTAACTACTTTTCATGTACACCTTACTTACTCATTTTAATCTGAGGTTAAATTCAGAAACGACATAAAAATAATATTCAAAACTTGCTTAGAAAGTAGAGGTTGTTTTTCTGGGCGTATCGTACCAATATCGGAGTTATCATTATGAGTTCTGTCATTGAGGA ATCGCCTGCTTGTTATCAGCTTTGTAGAAAAACCCGCGTAAAGCGGGTTTTTTT 54 TTerm_0454 NC_003197.2 58888 58898 11 58906 58916 11 7 100 0 22 63 36 63 36 0 58901 AAAAACCAGCA TGCTGGTTTTT True TTCATCTGA TGGTTGTAA True True - AAAAACCAGCA ACGATTG TGCTGGTTTTT TCAGATGAA 76 STM0049 intergenic 58746 58940 + down GATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGACAGGAAGAATAAGGCGTAGTCGTCATCCGTTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTTGGTTGTAATGCCTACAGGGATAA TGTGGATGTTCGTGAGGTCGAATAAGATTTCACAATTCAGAAATCTGCCTGATGACGCTACGTTGACCAGATCTTAAGAATTTCTTTTGATATTCAATGTGCGACAGGAAGAATAAGGCGTAGTCGTCATCCGTTGCTAATGCCCCACCTTTTTGCTATTCATCTGAAAAACCAGCACAATCGTTGCTGGTTTTTTGGTTGTAATGCCTACAGGGATAAGGGAAATGGGCAAAATAAAATATGG TTATCCCTGTAGGCATTACAACCAAAAAACCAGCAACGATTGTGCTGGTTTT 52 TTerm_0455 NC_003197.2 63517 63526 10 63532 63541 10 5 100 0 20 50 50 50 50 0 63528 ATGGGATACG CGTATCCCAT True GGATGAAAA CCACTATTA True False - ATGGGATACG CATGT CGTATCCCAT TTTTCATCC 64 STM0054 intergenic 63413 63548 - down ATAGTGGATGGGATACGCATGTCGTATCCCATTTTCATCCAAATTTTTTCTGAAAGAAAAGTAAGTATGAACTGGTTCAGGTTCCGGTGATGCCGAATGCAAGAAAATACCGTAATTAAATATTTAAATACCAAT TGCTGAAATACGTGCTGGCGATGTAATAGTGGATGGGATACGCATGTCGTATCCCATTTTCATCCAAATTTTTTCTGAAAGAAAAGTAAGTATGAACTGGTTCAGGTTCCGGTGATGCCGAATGCAAGAAAATACCGTAATTAAATATTTAAATACCAATATGTTTATACGGGAAATTACACGCT ATAGTGGATGGGATACGCATGTCGTATCCCA 31 TTerm_0456 NC_003197.2 128923 128929 7 128937 128943 7 7 100 0 14 28 71 28 71 0 128932 ATGCCGG CCGGCAT True TATAAAAAA GAGCGACTG True False - ATGCCGG GGATATT CCGGCAT TTTTTTATA 68 STM0110 intergenic 128522 129057 - down ACCCTTGACGCCTTACCGGGCCTACAGGTTATGCAATATCACCCGGTTGCCATTATATTCTGTAGGCCTGATAAGCGTAGCGCCATCAAGCTCCGGGTTACTCATCAGTCGCTCATGCCGGGGATATTCCGGCATTTTTTATACGATTTTTACTCGCCCGGTCACCACCTGCGTGACCACAGAAACCGCCGTATAAATCCCGTTGAAACGCCGTCCCATCATCGTCATCCAGAAACAGCCGAAATAAAAAAAGCCAGCAGATATTATCTGCTGGCGGGTGATTTTAGGCTATCGCCTACACCAATACTCAGTCACACATGATGTCTGCAATTGGCTTCAATCGGTCGCCTCCCACTGCATCAGTTCCGCGAGCATTTTTAAGCGCTGCGGTGCGCTCAGGCAAGCCAGCCAGGACGTTTTTTCCGTCGCGGCAAAATATCTCAACCAGAACTGGCGCATAGTGACCTCTTCCTCTTGCTTCATCGAAAGATATTATTGGCCTAATATAGGGATAATAAAATTGCTGAGTTTTTCA ATAAACAACCGGCATTTATGCGGTAACCCTTGACGCCTTACCGGGCCTACAGGTTATGCAATATCACCCGGTTGCCATTATATTCTGTAGGCCTGATAAGCGTAGCGCCATCAAGCTCCGGGTTACTCATCAGTCGCTCATGCCGGGGATATTCCGGCATTTTTTATACGATTTTTACTCGCCCGGTCACCACCTGCGTGACCACAGAAACCGCCGTATAAATCCCGTTGAAACGCCGTCCCATCATCGTCATCCAGAAACAGCCGAAATAAAAAAAGCCAGCAGATATTATCTGCTGGCGGGTGATTTTAGGCTATCGCCTACACCAATACTCAGTCACACATGATGTCTGCAATTGGCTTCAATCGGTCGCCTCCCACTGCATCAGTTCCGCGAGCATTTTTAAGCGCTGCGGTGCGCTCAGGCAAGCCAGCCAGGACGTTTTTTCCGTCGCGGCAAAATATCTCAACCAGAACTGGCGCATAGTGACCTCTTCCTCTTGCTTCATCGAAAGATATTATTGGCCTAATATAGGGATAATAAAATTGCTGAGTTTTTCATCGGAGTTCCCCTTTTATGCCCTCA ACCCTTGACGCCTTACCGGGCCTACAGGTTATGCAATATCACCCGGTTGCCATTATATTCTGTAGGCCTGATAAGCGTAGCGCCATCAAGCTCCGGGTTACTCATCAGTCGCTCATGCCGGGGATATTCCGGCA 134 TTerm_0457 NC_003197.2 133779 133792 14 133797 133810 14 4 92 0 23 46 53 46 53 0 133794 AAAAAAACCCGCGC GCGCGGGTTTTGTT True TCAGGCATA TGACTTCGA True True - AACAAAACCCGCGC CGTT GCGCGGGTTTTTTT TATGCCTGA 94 STM0114 intergenic 133758 133826 - down AGTCAGCTCGAAGTCAAACAAAACCCGCGCCGTTGCGCGGGTTTTTTTATGCCTGACGCAAGGCGCCC GACCGGTGGGCGGCATTCAACATTAAGTCAGCTCGAAGTCAAACAAAACCCGCGCCGTTGCGCGGGTTTTTTTATGCCTGACGCAAGGCGCCCCTGGAGACAAGGACCACATCATGAG AGTCAGCTCGAAGTCAAACAAAACCCGCGCCGTTGCGCGGGTTTTTT 47 TTerm_0458 NC_003197.2 135520 135535 16 135541 135556 16 5 93 0 27 65 34 66 33 0 135537 GCAGAATAAATCAGAA TTCTGGTTTATTCTGC True AAAACCGGG TTTTTAGCG True True - GCAGAATAAACCAGAA TTTGT TTCTGATTTATTCTGC CCCGGTTTT 78 STM0115 intergenic 135513 135770 + down AACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGCTTTTTAGCGTATATCAAAAATTTTATGCTGAATTAACGGTGAGCGATGCTTTTCGTCGCTGTGAAAAATAGATGAATTGCTGTAAGTCTGCATTTATAAGCGATTATTTATTACCAGGTGTGATTCAGACGGAGTATTTCTCCATTTCTTCTCTTCTTGCCTCCTGATTATTCTAACCTTCCCCATCTTTACGTCATTCCACCCAATTGCCAGG ATTAGTCTCTGTTTGTAAGCGATAAAACCGGGCAGAATAAATCAGAAACAAATTCTGGTTTATTCTGCTTTTTAGCGTATATCAAAAATTTTATGCTGAATTAACGGTGAGCGATGCTTTTCGTCGCTGTGAAAAATAGATGAATTGCTGTAAGTCTGCATTTATAAGCGATTATTTATTACCAGGTGTGATTCAGACGGAGTATTTCTCCATTTCTTCTCTTCTTGCCTCCTGATTATTCTAACCTTCCCCATCTTTACGTCATTCCACCCAATTGCCAGGCGTGATAGCGAGCGGTTAAGGTGTC CCTGGCAATTGGGTGGAATGACGTAAAGATGGGGAAGGTTAGAATAATCAGGAGGCAAGAAGAGAAGAAATGGAGAAATACTCCGTCTGAATCACACCTGGTAATAAATAATCGCTTATAAATGCAGACTTACAGCAATTCATCTATTTTTCACAGCGACGAAAAGCATCGCTCACCGTTAATTCAGCATAAAATTTTTGATATACGCTAAAAAGCAGAATAAACCAGAATTTGTTTCTGATTTATTCTG 250 TTerm_0459 NC_003197.2 161503 161514 12 161519 161530 12 4 100 0 24 50 50 50 50 0 161516 AAAAAGGCGCAG CTGCGCCTTTTT True ACACAGATA TATGGATGC True True - AAAAAGGCGCAG TCGC CTGCGCCTTTTT TATCTGTGT 88 STM0136 intergenic 161394 161532 + down TGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCAGTACTGGCATTATTGCCGAAGGGCGCTACGCTTATTCGGCCTGGCATTGAACACAGATAAAAAGGCGCAGGCGACTGCGCCTTTTTTA ACAGTGTCACGGTCGCCTGAGCTAATGCGATAAACTTACCGGCCTGATAAGACATAATGTGTTGCCATCAGGTCAGTACTGGCATTATTGCCGAAGGGCGCTACGCTTATTCGGCCTGGCATTGAACACAGATAAAAAGGCGCAGGCGACTGCGCCTTTTTTATGGATGCAACAAGATGAAAAAACTG TAAAAAAGGCGCAGTCGCCTGCGCCTTTT 29 TTerm_0460 NC_003197.2 180811 180821 11 180826 180836 11 4 100 0 22 36 63 36 63 0 180823 AAAAGCCGGCC GGCCGGCTTTT True TGTAAGCGA TTTGATAAT True True - AAAAGCCGGCC GTCG GGCCGGCTTTT TCGCTTACA 92 STM0153 intergenic 180807 180898 + down GCGAAAAGCCGGCCCGACGGCCGGCTTTTTTTGATAATCTCATGGAGTTTGTGAGGTTATTAGCGAAAGCGATAATTCGTGATCCGTTTGT TGACATTCGCCGTCTGGTGATGTAAGCGAAAAGCCGGCCCGACGGCCGGCTTTTTTTGATAATCTCATGGAGTTTGTGAGGTTATTAGCGAAAGCGATAATTCGTGATCCGTTTGTTGTTTCAAAATTGTTAACAATTTTG ACAAACGGATCACGAATTATCGCTTTCGCTAATAACCTCACAAACTCCATGAGATTATCAAAAAAAGCCGGCCGTCGGGCCGGCTTT 87 TTerm_0461 NC_003197.2 182464 182475 12 182480 182491 12 4 100 0 24 58 41 58 41 0 182477 AAAAAAGCGGCT AGCCGCTTTTTT True CCCGATACA TATGCATGG True True - AAAAAAGCGGCT GTAA AGCCGCTTTTTT TGTATCGGG 88 STM0154 intergenic 182431 182714 + down TCTTCTGTAGGTGGCAATGCGCCACCCGATACAAAAAAGCGGCTTTACAGCCGCTTTTTTTATGCATGGCAAATCAGATGTGTCAAATGATGGCGAAGGATAACGAAACCGCAAAATTTATCGTTTCCGCAGCAGTACGTTTTTCAAAGCTTATGCCGTCGGTAGTGCCTTTGTCTGTCATTTTCGACCAACTAATTGTTTCATAAGAAATACCTCTCCTTACTTTGTCATCATCCTGAAATTGGTAACGCTATAAAATAATAGCGAGCTAATTATGAGGTTT GAACCCGAAAGCGAAGAAGAAATAATCTTCTGTAGGTGGCAATGCGCCACCCGATACAAAAAAGCGGCTTTACAGCCGCTTTTTTTATGCATGGCAAATCAGATGTGTCAAATGATGGCGAAGGATAACGAAACCGCAAAATTTATCGTTTCCGCAGCAGTACGTTTTTCAAAGCTTATGCCGTCGGTAGTGCCTTTGTCTGTCATTTTCGACCAACTAATTGTTTCATAAGAAATACCTCTCCTTACTTTGTCATCATCCTGAAATTGGTAACGCTATAAAATAATAGCGAGCTAATTATGAGGTTTGATATATGAAACTTTTTCTGACAAC AAACCTCATAATTAGCTCGCTATTATTTTATAGCGTTACCAATTTCAGGATGATGACAAAGTAAGGAGAGGTATTTCTTATGAAACAATTAGTTGGTCGAAAATGACAGACAAAGGCACTACCGACGGCATAAGCTTTGAAAAACGTACTGCTGCGGAAACGATAAATTTTGCGGTTTCGTTATCCTTCGCCATCATTTGACACATCTGATTTGCCATGCATAAAAAAAGCGGCTGTAAAGCCGCTTTTT 250 TTerm_0462 NC_003197.2 220823 220845 23 220852 220874 23 6 73 0 16 52 47 52 47 0 220848 CGCCATCCGGCAAAAGAGTAAAT ATTTCTTCTTCTGTCGTCTGGCG True GCGTTAATC GAAGAATAG True False - CGCCAGACGACAGAAGAAGAAAT CTCTCA ATTTACTCTTTTGCCGGATGGCG GATTAACGC 40 STM0189 intergenic 220783 220911 + down CGTGTTATACGTTGCCTCCAGGCCAGATAAGGCGTTAATCGCCATCCGGCAAAAGAGTAAATTGAGAGATTTCTTCTTCTGTCGTCTGGCGGAAGAATAGAGAATCGGGCCTTTGCGCCTGTATGTTG GCGGCGCACGAAGAAGTATTCGTGACGTGTTATACGTTGCCTCCAGGCCAGATAAGGCGTTAATCGCCATCCGGCAAAAGAGTAAATTGAGAGATTTCTTCTTCTGTCGTCTGGCGGAAGAATAGAGAATCGGGCCTTTGCGCCTGTATGTTGCGGAGAAAAAGCATGGCGGGGAATG CAACATACAGGCGCAAAGGCCCGATTCTCTATTCTTCCGCCAGACGACAGAAGAAGAAATCTCTCAATTTACTCTTTTGCCGGATGGC 88 TTerm_0463 NC_003197.2 291074 291091 18 291098 291115 18 6 77 0 16 58 41 57 42 0 291094 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True - AAAACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTATT TTTTTCGTA 56 STM0251 intergenic 291059 291245 + down AGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAC TCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGG GTCGCTTAACCTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCCTTTCAGGTACACTCTGAAGTAT 171 TTerm_0464 NC_003197.2 299875 299885 11 299893 299903 11 7 100 0 22 36 63 36 63 0 299888 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True - AAAAGGCGCCG CTTCCCC CGGCGCCTTTT TAAATTGCT 92 STM0259 intergenic 299868 299924 + down CAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATAT GCTGGAAGCGCATAAAGCGGTATAGCAATTTAAAAGGCGCCGGGGGAAGCGGCGCCTTTTGGCTTTTTCGTCGGACAATATCAGGAGTCTGGCGTGCTATTGTCCT ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTT 49 TTerm_0465 NC_003197.2 299875 299885 11 299893 299903 11 7 100 0 22 36 63 36 63 0 299888 AAAAGGCGCCG CGGCGCCTTTT True AGCAATTTA GGCTTTTTC True True - AAAAGGCGCCG CTTCCCC CGGCGCCTTTT TAAATTGCT 92 STM0260 intergenic 299868 299924 - down ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTG AGGACAATAGCACGCCAGACTCCTGATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTTTAAATTGCTATACCGCTTTATGCGCTTCCAGC ATATTGTCCGACGAAAAAGCCAAAAGGCGCCGCTTCCCCCGGCGCCTTT 49 TTerm_0466 NC_003197.2 304384 304401 18 304407 304424 18 5 94 0 31 69 30 70 29 0 304403 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True - AAAAAAAACCGTATCCCT TTTAC AGTGATACGGTTTTTTTT TACTTCACA 86 STM0265 intergenic 304351 304666 + down ATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCAT GTCCCGTCCGTTCCGCCAGATACAAATCTCAGGGTGTTTTTATACATCCTGTGAAGTAAAAAAAACCGTATCACTGTAAAAGGGATACGGTTTTTTTTCGTCTTCAAGAAGTTCCACCGTCTATCGTGGAATCTGGCGCAAATGGGCCTACGCCTGGATGACGAACAGGATATTACCGCCACTTCTTTCACTGTCATGGCTATTTTGATCCCACTGACATTTAAGGCGCGGCCTCATGGCGGTGCTTAACCGGGATCGGGACATGTTCAGCGCAGAAGCAGACTGCGTAATGTTGATATCACTCAGATAATTACGGAGAACCGCCAGACATGCGCATCATCACTCCAGGGCATCCCACTTCTCCA ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTT 282 TTerm_0467 NC_003197.2 304384 304401 18 304407 304424 18 5 94 0 31 69 30 70 29 0 304403 AAAAAAAACCGTATCACT AGGGATACGGTTTTTTTT True TGTGAAGTA CGTCTTCAA True True - AAAAAAAACCGTATCCCT TTTAC AGTGATACGGTTTTTTTT TACTTCACA 86 STM0266 intergenic 304351 304666 - down ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGAT TGGAGAAGTGGGATGCCCTGGAGTGATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTTTACTTCACAGGATGTATAAAAACACCCTGAGATTTGTATCTGGCGGAACGGACGGGAC ATGATGCGCATGTCTGGCGGTTCTCCGTAATTATCTGAGTGATATCAACATTACGCAGTCTGCTTCTGCGCTGAACATGTCCCGATCCCGGTTAAGCACCGCCATGAGGCCGCGCCTTAAATGTCAGTGGGATCAAAATAGCCATGACAGTGAAAGAAGTGGCGGTAATATCCTGTTCGTCATCCAGGCGTAGGCCCATTTGCGCCAGATTCCACGATAGACGGTGGAACTTCTTGAAGACGAAAAAAAACCGTATCCCTTTTACAGTGATACGGTTTTTTT 282 TTerm_0468 NC_003197.2 338557 338565 9 338570 338578 9 4 88 0 13 61 38 62 37 0 338567 AAATGGAAG CTGCCATTT True TCAAAAGAA GATGAAAAT True False - AAATGGCAG CATC CTTCCATTT TTCTTTTGA 58 STM0293 intergenic 338276 338835 + down AGCGCGAGTGCTCTTTAGCGATATAGTTGCCCATATTTAGGCGTTACTAGCCGAAGATGGCGCGATTGTCTGGCAGGGGAAACAGCAATTCTGAGGTCAGGAAGATAGCATAACCCATTAACCGGGATAGATCCGCTAGACCTGAATCCAGTTGATGCGACAGGTTATAGGGTTTATGGTTATTTGCTCCTGGAGCAAATAAACCTTATTACATTGGTATTACTAATGATATGGTTTGACGAAGGGCCGAGCATTAAAGCACTGGCAGGTTATCAAAAGAAAATGGAAGGATGCTGCCATTTGATGAAAATGTAATCTAATGGAAAGTCAGAGGTTACGAGAAATATTATATAGAGAAATATAAAACCAGAACCGGAACCATAGGTGAAAAAATTCCCTCAACAAATAGAGAGAATAAATATAATTCATTTGATCATGGGCGAACAGATCCCAGCGCACAAGCATTTAAAGACTCTTAAAATAGTAAGGGAGTTGGTTCCGGTGGAGGAAAATGCGGATGAGTGATTAAGAATTTTGGGGCTGTGATAAGAAGTCGAGA TCTCGACTTCTTATCACAGCCCCAAAATTCTTAATCACTCATCCGCATTTTCCTCCACCGGAACCAACTCCCTTACTATTTTAAGAGTCTTTAAATGCTTGTGCGCTGGGATCTGTTCGCCCATGATCAAATGAATTATATTTATTCTCTCTATTTGTTGAGGGAATTTTTTCACCTATGGTTCCGGTTCTGGTTTTATATTTCTCTATATAATATTTCTCGTAACCTCTGACTTTCCATTAGATTACATTTTCATCAAATGGCAGCATCCTTCCATT 278 TTerm_0469 NC_003197.2 346687 346695 9 346701 346709 9 5 100 0 18 88 11 88 11 0 346697 AAAATCAAT ATTGATTTT True ATTGCAGAA AAAATCTGA True False - AAAATCAAT CAGCA ATTGATTTT TTCTGCAAT 44 STM0302 intergenic 346569 346968 + down CCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATA TGCATTGGCGCAGGAGGATACGTAGCCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATAAAGCATATGTCTTATGCACGACATT TATTCCTTTATGTAAAAAATAAATTATTTTTACGCCTGAGGGGACAAGAAAAAGCCCCCTAAACATAAAATCTTAAATATCACATATGAATACCTGACAGATAAACAAACCTTATACCAGGGGCTTATAAAGCCCCGCTCACAAAAGAGTGAATCAAACAAATCCACAAAACAGAAATAATAAAGGCATCAGTGTCCGTTAAATTATTTTACGAAACATAATATTCCTCTCCCTACAAAAAAGATGAATTTCAGATTTTAAAATCAATCAGCAATTGATTT 281 TTerm_0470 NC_003197.2 346686 346703 18 346712 346729 18 8 77 0 16 77 22 85 14 0 346707 AAAAATCAATTGCTGATT AATCTGAAATTCATCTTT True CATTGCAGA TTTGTAGGG True True - AAAGATGAATTTCAGATT TTAAAATC AATCAGCAATTGATTTTT TCTGCAATG 48 STM0302 intergenic 346569 346968 + down CCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATA TGCATTGGCGCAGGAGGATACGTAGCCGTCTGTTCCACTCATACTTCCTGTATCAGTGAATAAGGCGAATACTGTATATCAGGTTCGAGGATGTATTGAAAATTTACTCAAGGCAAATATGGTTAGCAATCTTCATTGCAGAAAAATCAATTGCTGATTGATTTTAAAATCTGAAATTCATCTTTTTTGTAGGGAGAGGAATATTATGTTTCGTAAAATAATTTAACGGACACTGATGCCTTTATTATTTCTGTTTTGTGGATTTGTTTGATTCACTCTTTTGTGAGCGGGGCTTTATAAGCCCCTGGTATAAGGTTTGTTTATCTGTCAGGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTTTACATAAAGGAATAAAGCATATGTCTTATGCACGACATT TATTCCTTTATGTAAAAAATAAATTATTTTTACGCCTGAGGGGACAAGAAAAAGCCCCCTAAACATAAAATCTTAAATATCACATATGAATACCTGACAGATAAACAAACCTTATACCAGGGGCTTATAAAGCCCCGCTCACAAAAGAGTGAATCAAACAAATCCACAAAACAGAAATAATAAAGGCATCAGTGTCCGTTAAATTATTTTACGAAACATAATATTCCTCTCCCTACAAAAAAGATGAATTTCAGATTTTAAAATCAATCAGCAATTGATTTT 282 TTerm_0471 NC_003197.2 352561 352567 7 352572 352578 7 4 100 0 14 0 100 0 100 0 352569 GCCCCGC GCGGGGC True AAGAAAAAG AGGAAAGAC True False - GCCCCGC TTTC GCGGGGC CTTTTTCTT 76 STM0309 intergenic 352503 352598 - down ATCAGTCTCGTGTCTTTCCTGCCCCGCTTTCGCGGGGCTTTTTCTTGCCGCTTTTTTATTATTGCTCATGCTACAGTGTAAAGACGCTGTTCAAT AAGTGCGTAAAGTCGAAGCCGCATAATCAGTCTCGTGTCTTTCCTGCCCCGCTTTCGCGGGGCTTTTTCTTGCCGCTTTTTTATTATTGCTCATGCTACAGTGTAAAGACGCTGTTCAATGAGGAGCTCCGATCGTGTCTGGTTT ATCAGTCTCGTGTCTTTCCTGCCCCGCTTTCGCGGGG 37 TTerm_0472 NC_003197.2 356037 356043 7 356051 356057 7 7 100 0 14 42 57 42 57 0 356046 ACGCCTT AAGGCGT True TAAAAATTA TTGTGGAGG True False - ACGCCTT AAGCGGG AAGGCGT TAATTTTTA 60 STM0310 intergenic 355860 356063 + down CTATACCCGTCATACTTCAAGCTGCAGGTGCGTTGGTTGCGCTCAGAAACCCCAGTCACAGAGTTATCTATGTTCCTGGGGATTTCCTCCCTTACCGCCTTCCTGCAACTCGAATTATTTAGGGTATAGCATATTGTTTTCTTGGATATTTTGAGATTTGATTGGCTGTAAAAATTACGCCTTCCCGCTTAAGGCGTTTGTGG GATCGAAAAAGAGATGGTTAAATAACTATACCCGTCATACTTCAAGCTGCAGGTGCGTTGGTTGCGCTCAGAAACCCCAGTCACAGAGTTATCTATGTTCCTGGGGATTTCCTCCCTTACCGCCTTCCTGCAACTCGAATTATTTAGGGTATAGCATATTGTTTTCTTGGATATTTTGAGATTTGATTGGCTGTAAAAATTACGCCTTCCCGCTTAAGGCGTTTGTGGAGGTGATATATGTGCGAACTGCTTG CCACAAACGCCTTAAGCGGGAAGGCG 26 TTerm_0473 NC_003197.2 415965 415979 15 415989 416003 15 9 93 0 25 60 40 57 42 0 415983 ATAAAAATACCCGCC GGCGGGTATATTTAT True ATTGCATCA TCCTGGCAA True False - ATAAATATACCCGCC GGAAACCCA GGCGGGTATTTTTAT TGATGCAAT 98 STM0366 intergenic 415952 416088 + down AAGCATTGCATCATAAAAATACCCGCCTGGGTTTCCGGCGGGTATATTTATTCCTGGCAACCGGCATCCGTTTTGCCGGATGACGGCCTGCAGTAAACGTAGCGCCATCAGGCATTCAGGACGCTGTCATTTGTCT GGCTGATATTTATAAAAAGAAATAAAAGCATTGCATCATAAAAATACCCGCCTGGGTTTCCGGCGGGTATATTTATTCCTGGCAACCGGCATCCGTTTTGCCGGATGACGGCCTGCAGTAAACGTAGCGCCATCAGGCATTCAGGACGCTGTCATTTGTCTTAATTATCCGACTGGTCTTTGGCAC AGACAAATGACAGCGTCCTGAATGCCTGATGGCGCTACGTTTACTGCAGGCCGTCATCCGGCAAAACGGATGCCGGTTGCCAGGAATAAATATACCCGCCGGAAACCCAGGCGGGTATTTTTA 123 TTerm_0474 NC_003197.2 415965 415979 15 415989 416003 15 9 93 0 25 60 40 57 42 0 415983 ATAAAAATACCCGCC GGCGGGTATATTTAT True ATTGCATCA TCCTGGCAA True False - ATAAATATACCCGCC GGAAACCCA GGCGGGTATTTTTAT TGATGCAAT 98 STM0367 intergenic 415952 416088 - down AGACAAATGACAGCGTCCTGAATGCCTGATGGCGCTACGTTTACTGCAGGCCGTCATCCGGCAAAACGGATGCCGGTTGCCAGGAATAAATATACCCGCCGGAAACCCAGGCGGGTATTTTTATGATGCAATGCTT GTGCCAAAGACCAGTCGGATAATTAAGACAAATGACAGCGTCCTGAATGCCTGATGGCGCTACGTTTACTGCAGGCCGTCATCCGGCAAAACGGATGCCGGTTGCCAGGAATAAATATACCCGCCGGAAACCCAGGCGGGTATTTTTATGATGCAATGCTTTTATTTCTTTTTATAAATATCAGCC AGACAAATGACAGCGTCCTGAATGCCTGATGGCGCTACGTTTACTGCAGGCCGTCATCCGGCAAAACGGATGCCGGTTGCCAGGAATAAATATACCCGCCGGAAACCCAGGCGGGTATTTTTA 123 TTerm_0475 NC_003197.2 458034 458044 11 458049 458059 11 4 100 0 22 45 54 45 54 0 458046 AAAAGGCTCGC GCGAGCCTTTT True ACGCATAAA ATCAATGCA True True - AAAAGGCTCGC GAAT GCGAGCCTTTT TTTATGCGT 84 STM0401 intergenic 458002 458074 + down GGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTTATCAATGCACTGACT CGCGACGGTATGGATGAATCGTTGAGGCGAGGTGGTTCGTAACACCTTACGCATAAAAAAGGCTCGCATTCGCGAGCCTTTTATCAATGCACTGACTTACAGGCTGGAAATGTTCTCAGCCA AGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTT 40 TTerm_0476 NC_003197.2 458034 458044 11 458049 458059 11 4 100 0 22 45 54 45 54 0 458046 AAAAGGCTCGC GCGAGCCTTTT True ACGCATAAA ATCAATGCA True True - AAAAGGCTCGC GAAT GCGAGCCTTTT TTTATGCGT 84 STM0402 intergenic 458002 458074 - down AGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTTTTTATGCGTAAGGTGTTACGAACCACCTCGCC TGGCTGAGAACATTTCCAGCCTGTAAGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTTTTTATGCGTAAGGTGTTACGAACCACCTCGCCTCAACGATTCATCCATACCGTCGCG AGTCAGTGCATTGATAAAAGGCTCGCGAATGCGAGCCTTT 40 TTerm_0477 NC_003197.2 468682 468689 8 468695 468702 8 5 87 0 11 56 43 57 42 0 468691 AAACGCTC GAACGTTT True AACGCACAA ATTGATTAA True False - AAACGTTC TGGCG GAGCGTTT TTGTGCGTT 46 STM0414 intergenic 468539 468701 - down AACGTTCTGGCGGAGCGTTTTGTGCGTTCCGCAACATCCCCCGCGCGACTTTTGTTGCCCTACTGACATTTCCGTCATTTATGACATGGATTGGTAATATTCATGAAAGATAGTACTGTCGCCGCGTCTAAAATGCGCAAACGTGAACGCAATCGATTACGT ATGATATTCAGCCTGTTAATCAATAAACGTTCTGGCGGAGCGTTTTGTGCGTTCCGCAACATCCCCCGCGCGACTTTTGTTGCCCTACTGACATTTCCGTCATTTATGACATGGATTGGTAATATTCATGAAAGATAGTACTGTCGCCGCGTCTAAAATGCGCAAACGTGAACGCAATCGATTACGTAAATGATAGATATGTGAAACAAGAC AACGTTCTGGCGGAGCGTT 19 TTerm_0478 NC_003197.2 493307 493319 13 493327 493339 13 7 100 0 26 53 46 53 46 0 493322 AAAAAACCGCCGT ACGGCGGTTTTTT True AATGGATAA CAATAGCAA True True - AAAAAACCGCCGT GTCACAA ACGGCGGTTTTTT TTATCCATT 92 STM0438 intergenic 493273 493355 + down CTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTTCAATAGCAACGCTTGT TTTACATATTATTCAGAATCGATAACTCGTGGGGCGTTACTGCCTGATGAAATGGATAAAAAAACCGCCGTTTGTGACACGGCGGTTTTTTCAATAGCAACGCTTGTTACCAGACGTAAGTCAGCAGATTCT ACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTT 48 TTerm_0479 NC_003197.2 493307 493319 13 493327 493339 13 7 100 0 26 53 46 53 46 0 493322 AAAAAACCGCCGT ACGGCGGTTTTTT True AATGGATAA CAATAGCAA True True - AAAAAACCGCCGT GTCACAA ACGGCGGTTTTTT TTATCCATT 92 STM0439 intergenic 493273 493355 - down ACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTTTTATCCATTTCATCAGGCAGTAACGCCCCACGAG AGAATCTGCTGACTTACGTCTGGTAACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTTTTATCCATTTCATCAGGCAGTAACGCCCCACGAGTTATCGATTCTGAATAATATGTAAA ACAAGCGTTGCTATTGAAAAAACCGCCGTGTCACAAACGGCGGTTTTT 48 TTerm_0480 NC_003197.2 501376 501384 9 501389 501397 9 4 100 0 18 44 55 44 55 0 501386 AAAACGGCC GGCCGTTTT True ATTATGTGA GTTTTGTCT True True - AAAACGGCC CGCA GGCCGTTTT TCACATAAT 76 STM0446 intergenic 501319 501655 + down CAAAACGGATTTGCAACTACCTCCGCTTTTCCAGTATGTTGCTACAGAATTATGTGAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGAATTTTGAGCGTGTCGTACAGTATTCAGACAAAAATTAGCCGAGAATTGTGAAAACCGCCGCAGCATCGCACAATCACCGTTCTCGACTCACAAAAGTGATGCCGCTATAATGCGCCGTCTTATATATGAACGTCTTCGGGATGATTCTGACGACAGGGAATGTGATTGATTACGAGAACATCCCGGTTCCGCGAAGCAAATAGCACGTGCTTGCGGAGTAGAGTTGACCGAGCACTGTGATTTTTTG TCGCGGCGCGGGAAGCATCGCGTAGCAAAACGGATTTGCAACTACCTCCGCTTTTCCAGTATGTTGCTACAGAATTATGTGAAAACGGCCTGCGGGCCGTTTTGTTTTGTCTGAATTTTGAGCGTGTCGTACAGTATTCAGACAAAAATTAGCCGAGAATTGTGAAAACCGCCGCAGCATCGCACAATCACCGTTCTCGACTCACAAAAGTGATGCCGCTATAATGCGCCGTCTTATATATGAACGTCTTCGGGATGATTCTGACGACAGGGAATGTGATTGATTACGAGAACATCCCGGTTCCGCGAAGCAAATAGCACGTGCTTGCGGAGTAGAGTTGACCGAGCACTGTGATTTTTTGAGGTAACAAGATGCAAGTTTCAGTT CAAAAAATCACAGTGCTCGGTCAACTCTACTCCGCAAGCACGTGCTATTTGCTTCGCGGAACCGGGATGTTCTCGTAATCAATCACATTCCCTGTCGTCAGAATCATCCCGAAGACGTTCATATATAAGACGGCGCATTATAGCGGCATCACTTTTGTGAGTCGAGAACGGTGATTGTGCGATGCTGCGGCGGTTTTCACAATTCTCGGCTAATTTTTGTCTGAATACTGTACGACACGCTCAAAATTCAGACAAAACAAAACGGCCCGCAGGCCGTTT 279 TTerm_0481 NC_003197.2 502995 503007 13 503014 503026 13 6 100 0 26 53 46 53 46 0 503010 AAAAACCCGTCAC GTGACGGGTTTTT True ATTTGCACA TTTGTCACG True True - AAAAACCCGTCAC TGAAAG GTGACGGGTTTTT TGTGCAAAT 84 STM0447 intergenic 502964 503199 + down TTTTTCGCGTTAAAAGCACGAAATTTGCACAAAAACCCGTCACCTTTCAGTGACGGGTTTTTTTTGTCACGTATTTTGCATGGTAAGGGTGCGAAAACCGCGTTTCAGTGTTAGCGTTAGAGCAAAAGATTGTTATGCTTGAATTATGGCGATGCCGTACCCATTACAGAGGGACTGGCTGATAATCCGTCCATCAGGTTACAATCAGTACAGCAGATTTTTTCAATTTTTATCC TGAGCTGATGAACCAGCAGGCGTAATTTTTCGCGTTAAAAGCACGAAATTTGCACAAAAACCCGTCACCTTTCAGTGACGGGTTTTTTTTGTCACGTATTTTGCATGGTAAGGGTGCGAAAACCGCGTTTCAGTGTTAGCGTTAGAGCAAAAGATTGTTATGCTTGAATTATGGCGATGCCGTACCCATTACAGAGGGACTGGCTGATAATCCGTCCATCAGGTTACAATCAGTACAGCAGATTTTTTCAATTTTTATCCAGGAGACGGAAATGTCATACAGCGG GGATAAAAATTGAAAAAATCTGCTGTACTGATTGTAACCTGATGGACGGATTATCAGCCAGTCCCTCTGTAATGGGTACGGCATCGCCATAATTCAAGCATAACAATCTTTTGCTCTAACGCTAACACTGAAACGCGGTTTTCGCACCCTTACCATGCAAAATACGTGACAAAAAAAACCCGTCACTGAAAGGTGACGGGTTTT 204 TTerm_0482 NC_003197.2 529214 529221 8 529226 529233 8 4 100 0 16 25 75 25 75 0 529223 AAGGCCGC GCGGCCTT True GCGTAAAAA ATCAACAGT True False - AAGGCCGC GCAA GCGGCCTT TTTTTACGC 80 STM0475 intergenic 528767 529250 - down ATTTGCTCACTGTTGATAAGGCCGCGCAAGCGGCCTTTTTTACGCAAAAATCATAAAATACGCTTATTGTTAGATTGATTATTTTTTGCCATATTAATAAAAGGTATAATCCTTACTGCGTTAAAGGCTTTTCTTAGGAAAGTTGGCCATTTCTTAATTCAGCCATTAATTAAGAAATATTAAGAATATTCCTGGCTATTTTCTCCTGTCAGAGTCTATTGTTTTAGCCTGAAAAGCTAAAAAACGTTAACCCAATGATTACACAAACAATAAAACTGGTTCCTTTTTAGGCGACCGACGATCACTGTTAAAATTCGAAAAAGTATGGCAACACGCGGCTTTCACGCAATTGTAATTTTTAGTAATATGACGATGAAAAGTTTTTTAGAGTAGATTATAGTTAAATCATAAGGTGACGTGGGAAGTACCAGGTTAGTTAGTTGTATCCATCCCGAAGGTGTTCGGTTAGTTTAAGCCACTAAA ATAGTCATTCGACAGAACATCGCTGATTTGCTCACTGTTGATAAGGCCGCGCAAGCGGCCTTTTTTACGCAAAAATCATAAAATACGCTTATTGTTAGATTGATTATTTTTTGCCATATTAATAAAAGGTATAATCCTTACTGCGTTAAAGGCTTTTCTTAGGAAAGTTGGCCATTTCTTAATTCAGCCATTAATTAAGAAATATTAAGAATATTCCTGGCTATTTTCTCCTGTCAGAGTCTATTGTTTTAGCCTGAAAAGCTAAAAAACGTTAACCCAATGATTACACAAACAATAAAACTGGTTCCTTTTTAGGCGACCGACGATCACTGTTAAAATTCGAAAAAGTATGGCAACACGCGGCTTTCACGCAATTGTAATTTTTAGTAATATGACGATGAAAAGTTTTTTAGAGTAGATTATAGTTAAATCATAAGGTGACGTGGGAAGTACCAGGTTAGTTAGTTGTATCCATCCCGAAGGTGTTCGGTTAGTTTAAGCCACTAAAAAGGGGATGCATTATGGACGAATAC ATTTGCTCACTGTTGATAAGGCCGCGCAAGCGGCCT 36 TTerm_0483 NC_003197.2 557817 557827 11 557832 557842 11 4 90 0 17 86 13 90 10 0 557829 AAAAAAACATT AATGTTGTTTT True TATGATTCA TTATTTTTC True True - AAAACAACATT TTAT AATGTTTTTTT TGAATCATA 42 STM0498 intergenic 557800 557948 - down AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTG TATTGCGTTTTAAACCGAAAGCGTAAAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTGTTATTTATGTTTAGAAAAGCAGTTA AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTT 131 TTerm_0484 NC_003197.2 557828 557833 6 557841 557846 6 7 100 0 12 100 0 100 0 0 557836 ATAAAA TTTTAT True AAAACATTA TTTTCTACA True True - ATAAAA AACAACA TTTTAT TAATGTTTT 24 STM0498 intergenic 557800 557948 - down AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTG TATTGCGTTTTAAACCGAAAGCGTAAAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTATAATGTTTTTTTGAATCATAAGGATGTGTTATTTATGTTTAGAAAAGCAGTTA AAAACGCTATATCAGGCAGCATCAGCTGCCTGATATATTATTAAGCCATCAGTAATTTACCGTATCAATATATAAAAATTTAACCGCACATCCTGTAGAAAAATAAAAAACAACATTTTA 120 TTerm_0485 NC_003197.2 582333 582341 9 582349 582357 9 7 88 0 13 94 5 100 0 0 582344 AAATAATTA TAATTCTTT True CAGCTTAAA ATTTTATAT True True - AAAGAATTA GTAGATA TAATTATTT TTTAAGCTG 34 STM0520 intergenic 582332 582408 + down AAATAATTATATCTACTAATTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGA AACGCAACGTATTGCTTCAGCTTAAAAATAATTATATCTACTAATTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGATGCGTGAAAAGAGGGATTTATGGAA TCGGATAACGTTGTTATGGGTTTAGCTATGAGGAACAAATAAATATAAAATAAAGAATTAGTAGATATAATTATT 75 TTerm_0486 NC_003197.2 583895 583900 6 583907 583912 6 6 100 0 12 83 16 83 16 0 583903 CATTAA TTAATG True TGAAAAAGC AAGTGTGCG True False - CATTAA ATACGC TTAATG GCTTTTTCA 32 STM0522 intergenic 583882 583949 + down ATATTGAAAAAGCATTAAGCGTATTTAATGAAGTGTGCGCTATTTAAAAACTATCTGTATCCATACA AGGAGAGAAAAAACTCGCAGGTTAAATATTGAAAAAGCATTAAGCGTATTTAATGAAGTGTGCGCTATTTAAAAACTATCTGTATCCATACAAGGAGTTTGTTATGTCTTTTGATTT TGTATGGATACAGATAGTTTTTAAATAGCGCACACTTCATTAAATACGCTTAAT 54 TTerm_0487 NC_003197.2 587862 587869 8 587874 587881 8 4 100 0 16 25 75 25 75 0 587871 GCCACGGT ACCGTGGC True TAAAAAAAG AAAATCCAA True False - GCCACGGT GAGA ACCGTGGC CTTTTTTTA 64 STM0525 intergenic 587850 587930 + down GCATAAAAAAAGCCACGGTTCTCACCGTGGCAAAATCCAACATAGCTAAATTAAAAATAATCAGGAGGGCTGCCCGCCGT TGGCCAGGACATCGGGACTCGTTAAGCATAAAAAAAGCCACGGTTCTCACCGTGGCAAAATCCAACATAGCTAAATTAAAAATAATCAGGAGGGCTGCCCGCCGTTAAATCATAACGTCGCGGTTACAGT ACGGCGGGCAGCCCTCCTGATTATTTTTAATTTAGCTATGTTGGATTTTGCCACGGTGAGAACCGTGG 68 TTerm_0488 NC_003197.2 587862 587869 8 587874 587881 8 4 100 0 16 25 75 25 75 0 587871 GCCACGGT ACCGTGGC True TAAAAAAAG AAAATCCAA True False - GCCACGGT GAGA ACCGTGGC CTTTTTTTA 64 STM0526 intergenic 587850 587930 - down ACGGCGGGCAGCCCTCCTGATTATTTTTAATTTAGCTATGTTGGATTTTGCCACGGTGAGAACCGTGGCTTTTTTTATGC ACTGTAACCGCGACGTTATGATTTAACGGCGGGCAGCCCTCCTGATTATTTTTAATTTAGCTATGTTGGATTTTGCCACGGTGAGAACCGTGGCTTTTTTTATGCTTAACGAGTCCCGATGTCCTGGCCA ACGGCGGGCAGCCCTCCTGATTATTTTTAATTTAGCTATGTTGGATTTTGCCACGGTGAGAACCGTGG 68 TTerm_0489 NC_003197.2 650745 650755 11 650760 650770 11 4 100 0 22 54 45 54 45 0 650757 AAAGCCGGATA TATCCGGCTTT True TTACCCGAA GTCATCAGT True False - AAAGCCGGATA TCGC TATCCGGCTTT TTCGGGTAA 68 STM0589 intergenic 650735 650788 + down TTTACCCGAAAAGCCGGATAGCGATATCCGGCTTTGTCATCAGTGTGGGCGAC GGCGATAGATGAACGGTTAGTCTGATTTACCCGAAAAGCCGGATAGCGATATCCGGCTTTGTCATCAGTGTGGGCGACTATCGCCGCCCCAGCGGTACCACCA GTCGCCCACACTGATGACAAAGCCGGATATCGCTATCCGGCTT 43 TTerm_0490 NC_003197.2 650745 650755 11 650760 650770 11 4 100 0 22 54 45 54 45 0 650757 AAAGCCGGATA TATCCGGCTTT True TTACCCGAA GTCATCAGT True False - AAAGCCGGATA TCGC TATCCGGCTTT TTCGGGTAA 68 STM0590 intergenic 650735 650788 - down GTCGCCCACACTGATGACAAAGCCGGATATCGCTATCCGGCTTTTCGGGTAAA TGGTGGTACCGCTGGGGCGGCGATAGTCGCCCACACTGATGACAAAGCCGGATATCGCTATCCGGCTTTTCGGGTAAATCAGACTAACCGTTCATCTATCGCC GTCGCCCACACTGATGACAAAGCCGGATATCGCTATCCGGCTT 43 TTerm_0491 NC_003197.2 677325 677335 11 677341 677351 11 5 100 0 22 18 81 18 81 0 677337 GCCCTGCCAGG CCTGGCAGGGC True AGTAAAAAG GTGTAAGTT True False - GCCCTGCCAGG TCACG CCTGGCAGGGC CTTTTTACT 84 STM0613 intergenic 677307 677375 + down CGATGATGCAGTAAAAAGCCCTGCCAGGCGTGACCTGGCAGGGCGTGTAAGTTTTTAGCCACCAGAGT TGTGAATATCGGGCATTTGTACTAACGATGATGCAGTAAAAAGCCCTGCCAGGCGTGACCTGGCAGGGCGTGTAAGTTTTTAGCCACCAGAGTTAACGCACAACCAATACGGGCAGCG ACTCTGGTGGCTAAAAACTTACACGCCCTGCCAGGTCACGCCTGGCAGGG 50 TTerm_0492 NC_003197.2 677325 677335 11 677341 677351 11 5 100 0 22 18 81 18 81 0 677337 GCCCTGCCAGG CCTGGCAGGGC True AGTAAAAAG GTGTAAGTT True False - GCCCTGCCAGG TCACG CCTGGCAGGGC CTTTTTACT 84 STM0614 intergenic 677307 677375 - down ACTCTGGTGGCTAAAAACTTACACGCCCTGCCAGGTCACGCCTGGCAGGGCTTTTTACTGCATCATCG CGCTGCCCGTATTGGTTGTGCGTTAACTCTGGTGGCTAAAAACTTACACGCCCTGCCAGGTCACGCCTGGCAGGGCTTTTTACTGCATCATCGTTAGTACAAATGCCCGATATTCACA ACTCTGGTGGCTAAAAACTTACACGCCCTGCCAGGTCACGCCTGGCAGGG 50 TTerm_0493 NC_003197.2 679813 679824 12 679830 679841 12 5 91 0 19 37 62 36 63 0 679826 AAACCCTCACCG CGGCGAGGGTTT True CCAAAAGAA AACTCTCAT True False - AAACCCTCGCCG CCAGA CGGTGAGGGTTT TTCTTTTGG 78 STM0617 intergenic 679769 679992 - down ACGAAGCAGAGGTTTAAAACCGTAGCCACATTTGAGAACACGCCCGAATGTAGACTAAAATTCACTCAGGGCTATGACGTTTGAGGATTTACCCGAATGTGAACTAAATCACTTCAAAGACGGGGTAAGTCTCAGTATCATCATGAGAGTTAAACCCTCGCCGCCAGACGGTGAGGGTTTTCTTTTGGGACCATTTACCTGCACTACTCGCAGTATCGATGAC TTATTATCGATAAAGCCGGTTATTGACGAAGCAGAGGTTTAAAACCGTAGCCACATTTGAGAACACGCCCGAATGTAGACTAAAATTCACTCAGGGCTATGACGTTTGAGGATTTACCCGAATGTGAACTAAATCACTTCAAAGACGGGGTAAGTCTCAGTATCATCATGAGAGTTAAACCCTCGCCGCCAGACGGTGAGGGTTTTCTTTTGGGACCATTTACCTGCACTACTCGCAGTATCGATGACATGGAGTAAGAAATGTCCAGACCCA ACGAAGCAGAGGTTTAAAACCGTAGCCACATTTGAGAACACGCCCGAATGTAGACTAAAATTCACTCAGGGCTATGACGTTTGAGGATTTACCCGAATGTGAACTAAATCACTTCAAAGACGGGGTAAGTCTCAGTATCATCATGAGAGTTAAACCCTCGCCGCCAGACGGTGAGGGTT 179 TTerm_0494 NC_003197.2 693152 693161 10 693167 693176 10 5 100 0 20 40 60 40 60 0 693163 AAAACCCGCC GGCGGGTTTT True AAGATTTCA TTTTGCGCT True True - AAAACCCGCC GAAAG GGCGGGTTTT TGAAATCTT 88 STM0629 intergenic 693127 693185 + down GCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTTTTTTGCGCT CGCTGCAAACGTAACTGCTCTGTAAGCATACGTCCGACAGCAAGATTTCAAAACCCGCCCTTTCGGCGGGTTTTTTTTGCGCTTAACGCGCCGCTGCGGCGGAAAATA AGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTT 33 TTerm_0495 NC_003197.2 693152 693161 10 693167 693176 10 5 100 0 20 40 60 40 60 0 693163 AAAACCCGCC GGCGGGTTTT True AAGATTTCA TTTTGCGCT True True - AAAACCCGCC GAAAG GGCGGGTTTT TGAAATCTT 88 STM0630 intergenic 693127 693185 - down AGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTTTGAAATCTTGCTGTCGGACGTATGC TATTTTCCGCCGCAGCGGCGCGTTAAGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTTTGAAATCTTGCTGTCGGACGTATGCTTACAGAGCAGTTACGTTTGCAGCG AGCGCAAAAAAAACCCGCCGAAAGGGCGGGTTT 33 TTerm_0496 NC_003197.2 694807 694818 12 694824 694835 12 5 100 0 24 58 41 58 41 0 694820 AAAAAAACCGGC GCCGGTTTTTTT True CGCAGAGTA TGCCTGAAA True True - AAAAAAACCGGC AACTC GCCGGTTTTTTT TACTCTGCG 88 STM0632 intergenic 694779 694865 + down TTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTTTGCCTGAAATGTAAGCGTCTATTACACGAT TGAAAAACTCTCGCACAAAGAGTAATTGCGCGATGCGCTTGCTCCGCAGAGTAAAAAAACCGGCGAGTTGCCGGTTTTTTTTGCCTGAAATGTAAGCGTCTATTACACGATCATTTCACTTCCATGCCTTTGGCCT ATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTT 58 TTerm_0497 NC_003197.2 694807 694818 12 694824 694835 12 5 100 0 24 58 41 58 41 0 694820 AAAAAAACCGGC GCCGGTTTTTTT True CGCAGAGTA TGCCTGAAA True True - AAAAAAACCGGC AACTC GCCGGTTTTTTT TACTCTGCG 88 STM0633 intergenic 694779 694865 - down ATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTTTACTCTGCGGAGCAAGCGCATCGCGCAA AGGCCAAAGGCATGGAAGTGAAATGATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTTTACTCTGCGGAGCAAGCGCATCGCGCAATTACTCTTTGTGCGAGAGTTTTTCA ATCGTGTAATAGACGCTTACATTTCAGGCAAAAAAAACCGGCAACTCGCCGGTTTTTT 58 TTerm_0498 NC_003197.2 698327 698336 10 698341 698350 10 4 100 0 20 30 70 30 70 0 698338 AACTCCCGCC GGCGGGAGTT True AAAATAACA TTACTGATG True True - AACTCCCGCC CTGT GGCGGGAGTT TGTTATTTT 88 STM0637 intergenic 698306 698404 - down AAAATTGAACGCTTGAAAGTGTGATTTTCGTCCCCATATACTATGCATCAGTAAAACTCCCGCCCTGTGGCGGGAGTTGTTATTTTTTTTACGTAATG TAATGTTCCATCACTGGTTTGGATAAAAATTGAACGCTTGAAAGTGTGATTTTCGTCCCCATATACTATGCATCAGTAAAACTCCCGCCCTGTGGCGGGAGTTGTTATTTTTTTTACGTAATGCCGGAGCTGACATGAAAACCAAACT AAAATTGAACGCTTGAAAGTGTGATTTTCGTCCCCATATACTATGCATCAGTAAAACTCCCGCCCTGTGGCGGGAGT 77 TTerm_0499 NC_003197.2 737980 737990 11 737995 738005 11 4 100 0 22 54 45 54 45 0 737992 AAAAAGCTCGC GCGAGCTTTTT True AGAAAAGCA AAAGGTGGC True True - AAAAAGCTCGC TTCG GCGAGCTTTTT TGCTTTTCT 84 STM0673 intergenic 737878 738014 - down GCCACCTTTAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTTATAAATTCCGAAAGAGGTTTCCCCCTTAATGCCCTGCTATCAGTAAAACGCTATGATAAAGCCTTACAGGGATCGTTCGGTAACCTC CCGAGGTTCGAATCCTCGTACCCCAGCCACCTTTAAAAAGCTCGCTTCGGCGAGCTTTTTGCTTTTCTGCGTTTATAAATTCCGAAAGAGGTTTCCCCCTTAATGCCCTGCTATCAGTAAAACGCTATGATAAAGCCTTACAGGGATCGTTCGGTAACCTCACAATGAATTACCAGTTTTGTTGGT GCCACCTTTAAAAAGCTCGCTTCGGCGAGCTTTT 34 TTerm_0500 NC_003197.2 738907 738915 9 738920 738928 9 4 100 0 18 44 55 44 55 0 738917 AAAGAGCCC GGGCTCTTT True CTATAAAAA CGTCATCGT True False - AAAGAGCCC TTAG GGGCTCTTT TTTTTATAG 76 STM0680 intergenic 738719 738942 - down AATTAACGATGACGAAAGAGCCCTTAGGGGCTCTTTTTTTATAGCAAACTACTTTCGGAAAAACGATTAATAACCAATAATTGCCGAATATTGCGCCACGCTGTTCGCAACCTAACCAAACAGACACTTTCCGACGTTTTTCGATGAAAAAGAGGTTGACGCTTCAAGGCTCAATACGCATAATGCGCCCCGCAACGCCGATAAGGTAACGCGAAAAAAAGAT GCGTGCATCAGTCGGCGTACCAGTAAATTAACGATGACGAAAGAGCCCTTAGGGGCTCTTTTTTTATAGCAAACTACTTTCGGAAAAACGATTAATAACCAATAATTGCCGAATATTGCGCCACGCTGTTCGCAACCTAACCAAACAGACACTTTCCGACGTTTTTCGATGAAAAAGAGGTTGACGCTTCAAGGCTCAATACGCATAATGCGCCCCGCAACGCCGATAAGGTAACGCGAAAAAAAGATGGCTACGTAGCTCAGTTGGTTAGAG AATTAACGATGACGAAAGAGCCCTTAGGGGCTCTT 35 TTerm_0501 NC_003197.2 744100 744108 9 744117 744125 9 8 100 0 18 0 100 0 100 0 744112 CCGCCCCGC GCGGGGCGG True AAAATTTAC AGACAACAT True False - CCGCCCCGC CAGTCAAT GCGGGGCGG GTAAATTTT 84 STM0684 intergenic 744086 744134 - down ATGTTGTCTCCGCCCCGCCAGTCAATGCGGGGCGGTAAATTTTTGATA AAGCAGAAAATATTAAAGGTCTGTAATGTTGTCTCCGCCCCGCCAGTCAATGCGGGGCGGTAAATTTTTGATATCGGGGGTCGGAATGTATGCTTTAA ATGTTGTCTCCGCCCCGCCAGTCAATGCGGGGCG 34 TTerm_0502 NC_003197.2 761417 761427 11 761432 761442 11 4 100 0 22 54 45 54 45 0 761429 AAAAAGGAGCC GGCTCCTTTTT True TATGGAAGA TGTATTAAC True True - AAAAAGGAGCC GTAA GGCTCCTTTTT TCTTCCATA 84 STM0698 intergenic 761401 761516 + down TGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTTTGTATTAACGGCGCTGCGCTTATCAGGCCTGTAAACCGCCTCCAGGCCGGATAAGGCGCTTGTGATATCTGACT TAGCGAAGTATTGAAAAACGCCTGATGGGCGATATGGAAGAAAAAGGAGCCTTACGGCTCCTTTTTTGTATTAACGGCGCTGCGCTTATCAGGCCTGTAAACCGCCTCCAGGCCGGATAAGGCGCTTGTGATATCTGACTTATTCGCTCTGAGTCGCCAGATGTC AGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTT 99 TTerm_0503 NC_003197.2 761417 761427 11 761432 761442 11 4 100 0 22 54 45 54 45 0 761429 AAAAAGGAGCC GGCTCCTTTTT True TATGGAAGA TGTATTAAC True True - AAAAAGGAGCC GTAA GGCTCCTTTTT TCTTCCATA 84 STM0699 intergenic 761401 761516 - down AGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTTTCTTCCATATCGCCCA GACATCTGGCGACTCAGAGCGAATAAGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTTTCTTCCATATCGCCCATCAGGCGTTTTTCAATACTTCGCTA AGTCAGATATCACAAGCGCCTTATCCGGCCTGGAGGCGGTTTACAGGCCTGATAAGCGCAGCGCCGTTAATACAAAAAAGGAGCCGTAAGGCTCCTTTT 99 TTerm_0504 NC_003197.2 774685 774697 13 774704 774716 13 6 92 0 21 50 50 50 50 0 774700 AAAAACCGTCAGC GCTGGCGGTTTTT True CCAGCCTGA TTATGCGCC True True - AAAAACCGCCAGC GTGGCG GCTGACGGTTTTT TCAGGCTGG 82 STM0708 intergenic 774670 774771 + down TCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTTTTATGCGCCAGGGTCTACACTGTTTAACGCTATTCGCCGTGACGTTTCATCTTTC AAAAGCCACCTGCGACTTTTATTAATCGCGACCAGCCTGAAAAACCGTCAGCCGCCACGCTGGCGGTTTTTTTATGCGCCAGGGTCTACACTGTTTAACGCTATTCGCCGTGACGTTTCATCTTTCAGGAGTTGTATGCCCACCCATTTAG GAAAGATGAAACGTCACGGCGAATAGCGTTAAACAGTGTAGACCCTGGCGCATAAAAAAACCGCCAGCGTGGCGGCTGACGGTTTT 86 TTerm_0505 NC_003197.2 795919 795930 12 795939 795950 12 8 100 0 24 33 66 33 66 0 795934 ACCGGATGGCGA TCGCCATCCGGT True GAAAATGTA TGTCAATTA True False - ACCGGATGGCGA CGCAACCC TCGCCATCCGGT TACATTTTC 80 STM0730 intergenic 795833 795957 - down ATTGACAACCGGATGGCGACGCAACCCTCGCCATCCGGTACATTTTCCCTTTTTTCTTATCCTCATTATTTTATTCTTACCCCGTTACTCTCTATGATTAATTAAGGTTTCGCTAAATATCATT ATTTTAAATCGGCGCTGAAGCGTTAATTGACAACCGGATGGCGACGCAACCCTCGCCATCCGGTACATTTTCCCTTTTTTCTTATCCTCATTATTTTATTCTTACCCCGTTACTCTCTATGATTAATTAAGGTTTCGCTAAATATCATTCAGGGAGCATGGAATGCCGATTCTG ATTGACAACCGGATGGCGACGCAACCCTCGCCATCCGG 38 TTerm_0506 NC_003197.2 812816 812832 17 812837 812853 17 4 94 0 29 73 26 75 25 0 812834 TAAAAATATAGGGGCTT AAGCCCATATATTTTTA True AACCTCCTT CTCTCCCTT True True - TAAAAATATATGGGCTT ATGC AAGCCCCTATATTTTTA AAGGAGGTT 90 STM0743 intergenic 812801 813018 + down ATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTACTCTCCCTTAACTTCCCCCCATTCCCAAGCCTCATTCCCACGCGTATAGTAGCAACGTTTAAAAGCTCTACTTTTGTTGCATTACCGGGATGTAAAGTGAATACAAGGCGATATACAACGGCATTCTTGAGGCATTACGGCGGCAAGCGGATGACGCCAACAAAG CGGCCTGATTTTCTTCTTCTTGTGAATAAGAAACCTCCTTAAAAATATAGGGGCTTGCATAAGCCCATATATTTTTACTCTCCCTTAACTTCCCCCCATTCCCAAGCCTCATTCCCACGCGTATAGTAGCAACGTTTAAAAGCTCTACTTTTGTTGCATTACCGGGATGTAAAGTGAATACAAGGCGATATACAACGGCATTCTTGAGGCATTACGGCGGCAAGCGGATGACGCCAACAAAGAGGCTGCAGGGATGAATAAGTATAT CTTTGTTGGCGTCATCCGCTTGCCGCCGTAATGCCTCAAGAATGCCGTTGTATATCGCCTTGTATTCACTTTACATCCCGGTAATGCAACAAAAGTAGAGCTTTTAAACGTTGCTACTATACGCGTGGGAATGAGGCTTGGGAATGGGGGGAAGTTAAGGGAGAGTAAAAATATATGGGCTTATGCAAGCCCCTATATTTTT 202 TTerm_0507 NC_003197.2 823029 823035 7 823040 823046 7 4 100 0 14 28 71 28 71 0 823037 GGAGAGC GCTCTCC True AATAAAAAG CGTTATCAG True False - GGAGAGC TTTC GCTCTCC CTTTTTATT 60 STM0759 intergenic 822971 823069 - down ATGCAAAAAAAAGTCTGATAACGGGAGAGCTTTCGCTCTCCTTTTTATTTTATCAGCGAAAAATCAGTATGATGTCTACAGTATTGATGAGAATAACA CCAAAACCGACGGTACCACACAGTAATGCAAAAAAAAGTCTGATAACGGGAGAGCTTTCGCTCTCCTTTTTATTTTATCAGCGAAAAATCAGTATGATGTCTACAGTATTGATGAGAATAACAAAGGAATGACGTTATGGCGCACTCA ATGCAAAAAAAAGTCTGATAACGGGAGAGCTTTCGCTCTC 40 TTerm_0508 NC_003197.2 850267 850279 13 850285 850297 13 5 92 0 21 19 80 16 83 0 850281 ACGGGCCGCCACA TGCGGCGGCCCGT True GTAAAACCA TTATAAGCC True False - ACGGGCCGCCGCA GCAGA TGTGGCGGCCCGT TGGTTTTAC 82 STM0785 intergenic 850179 850323 + down AGCGCTGTGTGCCGGATGGAGGCGGGCTGGAGCTCATCAAGGCGGGATGCCTGATTAATTTCAATAAACATTGCTTGCAGTAAAACCACGGGCCGCCACATCTGCTGCGGCGGCCCGTTTATAAGCCTGAACCGGAACGGTGAT GTGGGTTGTGGTGAACGCGTACTAAAGCGCTGTGTGCCGGATGGAGGCGGGCTGGAGCTCATCAAGGCGGGATGCCTGATTAATTTCAATAAACATTGCTTGCAGTAAAACCACGGGCCGCCACATCTGCTGCGGCGGCCCGTTTATAAGCCTGAACCGGAACGGTGATTACTGCTTAGGTTCCGCCACTACTT ATCACCGTTCCGGTTCAGGCTTATAAACGGGCCGCCGCAGCAGATGTGGCGGCCCG 56 TTerm_0509 NC_003197.2 850267 850279 13 850285 850297 13 5 92 0 21 19 80 16 83 0 850281 ACGGGCCGCCACA TGCGGCGGCCCGT True GTAAAACCA TTATAAGCC True False - ACGGGCCGCCGCA GCAGA TGTGGCGGCCCGT TGGTTTTAC 82 STM0786 intergenic 850179 850323 - down ATCACCGTTCCGGTTCAGGCTTATAAACGGGCCGCCGCAGCAGATGTGGCGGCCCGTGGTTTTACTGCAAGCAATGTTTATTGAAATTAATCAGGCATCCCGCCTTGATGAGCTCCAGCCCGCCTCCATCCGGCACACAGCGCT AAGTAGTGGCGGAACCTAAGCAGTAATCACCGTTCCGGTTCAGGCTTATAAACGGGCCGCCGCAGCAGATGTGGCGGCCCGTGGTTTTACTGCAAGCAATGTTTATTGAAATTAATCAGGCATCCCGCCTTGATGAGCTCCAGCCCGCCTCCATCCGGCACACAGCGCTTTAGTACGCGTTCACCACAACCCAC ATCACCGTTCCGGTTCAGGCTTATAAACGGGCCGCCGCAGCAGATGTGGCGGCCCG 56 TTerm_0510 NC_003197.2 863937 863943 7 863951 863957 7 7 100 0 14 57 42 57 42 0 863946 GCGATAA TTATCGC True CAAAAATAG CCGGCGAAA True False - GCGATAA AAAAAAA TTATCGC CTATTTTTG 44 STM0797 intergenic 863785 864348 + down CTGCGCTTAAAAACTGCCTTCTTGCAGGATCAGACGATCCTGCTGTTTTTTCGCCAGACCTTCCTGACGTCGCCATGCTAAAAATGTGCAAAATGTGAGCGTCTACGCCTCAATTTTTCCCTTCTCGTTAGCCAATAATCTGCCAAAAATAGCGATAATTTTTTTTTATCGCCCGGCGAAAACGTCAGGAGCTGATTTTGCCAGGCGGCAGGGGATACGGGCTGGAAGCAGTTATCCACTATTCCTGTGGATAACCTTGTGTATTAGAGTTAGAAAACACAACGTAAGCGAGAGGCGACGCGGCCTGCGACTAAATTGGCGCGAAAGACGGCTTGAGAAAATATCCCTTTTCAGACAGCAAGTTATATAAAATCAATGGTTGTAAAGGAAGGGGGATACGTTGACATAAAACTTTCATCATCCGACTTGACAAATGTTAAAAAAGACTCTGGTCTGGGGATAACCAGCACACTGCTGGAATTTTACCCCGCGACTGTCTATGTTTTACCTCTAAATAGCGTGGGGTATCTGCCGATAGCCATTATACACTGGAGTGTTACTGT ACAGTAACACTCCAGTGTATAATGGCTATCGGCAGATACCCCACGCTATTTAGAGGTAAAACATAGACAGTCGCGGGGTAAAATTCCAGCAGTGTGCTGGTTATCCCCAGACCAGAGTCTTTTTTAACATTTGTCAAGTCGGATGATGAAAGTTTTATGTCAACGTATCCCCCTTCCTTTACAACCATTGATTTTATATAACTTGCTGTCTGAAAAGGGATATTTTCTCAAGCCGTCTTTCGCGCCAATTTAGTCGCAGGCCGCGTCGCCTCTCGCTTACGTTGTGTTTTCTAACTCTAATACACAAGGTTATCCACAGGAATAGTGGATAACTGCTTCCAGCCCGTATCCCCTGCCGCCTGGCAAAATCAGCTCCTGACGTTTTCGCCGGGCGATAAAAAAAAATTATCG 411 TTerm_0511 NC_003197.2 874112 874122 11 874128 874138 11 5 100 0 22 54 45 54 45 0 874124 AAAATCCTGGC GCCAGGATTTT True GATCTCTTA TTTTAGGAC True True - AAAATCCTGGC GCAGG GCCAGGATTTT TAAGAGATC 84 STM0807 intergenic 874096 874243 + down TTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTTTTTTAGGACTATATTTAGGGCGAAACAGCATAAATATCTTAGAAATGTTTTCCTACGCTTGCCATTCTTATCACCGTGATCATGTGAAGAGTGATAAATGACAAG GCGTATTTTTGGTAATCGCCGCTAATTATAGCGATCTCTTAAAATCCTGGCCCTGCGCCAGGATTTTTTTTAGGACTATATTTAGGGCGAAACAGCATAAATATCTTAGAAATGTTTTCCTACGCTTGCCATTCTTATCACCGTGATCATGTGAAGAGTGATAAATGACAAGTGGGACCTCTGGCTGCAATACGTAT CTTGTCATTTATCACTCTTCACATGATCACGGTGATAAGAATGGCAAGCGTAGGAAAACATTTCTAAGATATTTATGCTGTTTCGCCCTAAATATAGTCCTAAAAAAAATCCTGGCGCAGGGCCAGGATTT 131 TTerm_0512 NC_003197.2 890315 890322 8 890329 890336 8 6 100 0 16 12 87 12 87 0 890325 GCCCGTCC GGACGGGC True TAAAAAAAG AAATAAGGG True False - GCCCGTCC GTCACT GGACGGGC CTTTTTTTA 72 STM0822 intergenic 890309 890465 + down AAAAAGCCCGTCCAGTGACGGACGGGCAAATAAGGGTAACAAACAGGGTTAATGAGGGTTGGAGCAGTGGGTCTGTTGGCAAACAGACGAGGGTAATACCCGTCAGAATTCAAACAACAGCGATGTTACAGCCTGAAATCTGGCGGGCAGGTAAAT CGTCGAACAGGCTTTTAGCGAATAAAAAAAGCCCGTCCAGTGACGGACGGGCAAATAAGGGTAACAAACAGGGTTAATGAGGGTTGGAGCAGTGGGTCTGTTGGCAAACAGACGAGGGTAATACCCGTCAGAATTCAAACAACAGCGATGTTACAGCCTGAAATCTGGCGGGCAGGTAAATTATTTATAAATCACCGCAGTGCCGC ATTTACCTGCCCGCCAGATTTCAGGCTGTAACATCGCTGTTGTTTGAATTCTGACGGGTATTACCCTCGTCTGTTTGCCAACAGACCCACTGCTCCAACCCTCATTAACCCTGTTTGTTACCCTTATTTGCCCGTCCGTCACTGGACGGG 150 TTerm_0513 NC_003197.2 890315 890322 8 890329 890336 8 6 100 0 16 12 87 12 87 0 890325 GCCCGTCC GGACGGGC True TAAAAAAAG AAATAAGGG True False - GCCCGTCC GTCACT GGACGGGC CTTTTTTTA 72 STM0823 intergenic 890309 890465 - down ATTTACCTGCCCGCCAGATTTCAGGCTGTAACATCGCTGTTGTTTGAATTCTGACGGGTATTACCCTCGTCTGTTTGCCAACAGACCCACTGCTCCAACCCTCATTAACCCTGTTTGTTACCCTTATTTGCCCGTCCGTCACTGGACGGGCTTTTT GCGGCACTGCGGTGATTTATAAATAATTTACCTGCCCGCCAGATTTCAGGCTGTAACATCGCTGTTGTTTGAATTCTGACGGGTATTACCCTCGTCTGTTTGCCAACAGACCCACTGCTCCAACCCTCATTAACCCTGTTTGTTACCCTTATTTGCCCGTCCGTCACTGGACGGGCTTTTTTTATTCGCTAAAAGCCTGTTCGACG ATTTACCTGCCCGCCAGATTTCAGGCTGTAACATCGCTGTTGTTTGAATTCTGACGGGTATTACCCTCGTCTGTTTGCCAACAGACCCACTGCTCCAACCCTCATTAACCCTGTTTGTTACCCTTATTTGCCCGTCCGTCACTGGACGGG 150 TTerm_0514 NC_003197.2 897226 897238 13 897245 897258 14 6 85 7 11 81 18 83 16 0 897241 AATCGTTGTTAAA TTTAATTAACGATT True AGCGTAAAA GTGTGATGT True False - AATCGTTAATTAAA GATTGT TTTAACAACGATT TTTTACGCT 22 STM0831 intergenic 897024 897490 - down AATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGGTTTTGCACTTAAATAGTGCACACGTCTTGTACTCCCCTCCGACAAAAGTGAATTATTTGTAATAATTACATCACACAATCGTTAATTAAAGATTGTTTTAACAACGATTTTTACGCTAAATAGACCCTGTATCTCTACTTTGTTATTCATGCACTAAATCAGTGCCCCAAAACGGTGCGGCATACTGGTTTTGCCCGACTTATTGTGCACAGGAATGTTTCACGCTTCTGTTAAAACAATGAGTTACATAATTGGCATGATTTTTTCATTACGCTACATGTTCTCGCAGGGGATCGCCCCGTGGATAGAA GGTTTATCGAATCCAACATCGAATAAATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGGTTTTGCACTTAAATAGTGCACACGTCTTGTACTCCCCTCCGACAAAAGTGAATTATTTGTAATAATTACATCACACAATCGTTAATTAAAGATTGTTTTAACAACGATTTTTACGCTAAATAGACCCTGTATCTCTACTTTGTTATTCATGCACTAAATCAGTGCCCCAAAACGGTGCGGCATACTGGTTTTGCCCGACTTATTGTGCACAGGAATGTTTCACGCTTCTGTTAAAACAATGAGTTACATAATTGGCATGATTTTTTCATTACGCTACATGTTCTCGCAGGGGATCGCCCCGTGGATAGAAAAGGAAATGCTATGAAGTCTCTATT AATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGGTTTTGCACTTAAATAGTGCACACGTCTTGTACTCCCCTCCGACAAAAGTGAATTATTTGTAATAATTACATCACACAATCGTTAATTAAAGATTGTTTTAACAACGAT 264 TTerm_0515 NC_003197.2 897334 897340 7 897348 897354 7 7 100 0 14 28 71 28 71 0 897343 ACCCCTG CAGGGGT True AGTGCAAAA ATAGGGATG True False - ACCCCTG CCTGGCA CAGGGGT TTTTGCACT 68 STM0831 intergenic 897024 897490 - down AATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGGTTTTGCACTTAAATAGTGCACACGTCTTGTACTCCCCTCCGACAAAAGTGAATTATTTGTAATAATTACATCACACAATCGTTAATTAAAGATTGTTTTAACAACGATTTTTACGCTAAATAGACCCTGTATCTCTACTTTGTTATTCATGCACTAAATCAGTGCCCCAAAACGGTGCGGCATACTGGTTTTGCCCGACTTATTGTGCACAGGAATGTTTCACGCTTCTGTTAAAACAATGAGTTACATAATTGGCATGATTTTTTCATTACGCTACATGTTCTCGCAGGGGATCGCCCCGTGGATAGAA GGTTTATCGAATCCAACATCGAATAAATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGGTTTTGCACTTAAATAGTGCACACGTCTTGTACTCCCCTCCGACAAAAGTGAATTATTTGTAATAATTACATCACACAATCGTTAATTAAAGATTGTTTTAACAACGATTTTTACGCTAAATAGACCCTGTATCTCTACTTTGTTATTCATGCACTAAATCAGTGCCCCAAAACGGTGCGGCATACTGGTTTTGCCCGACTTATTGTGCACAGGAATGTTTCACGCTTCTGTTAAAACAATGAGTTACATAATTGGCATGATTTTTTCATTACGCTACATGTTCTCGCAGGGGATCGCCCCGTGGATAGAAAAGGAAATGCTATGAAGTCTCTATT AATCTATCTCTACCCTGAATACTTCGAGTTGCAGGAAGGTACAAACGCAGCGAATCCGCAGAAGCCTGACTTCCGTCGGTCACTGAAGCGAACGCACCTGCAACTTGATGTACACAGGTATATAAGTCATCCCTATACCCCTGCCTGGCACAGGGG 156 TTerm_0516 NC_003197.2 900070 900080 11 900087 900097 11 6 100 0 22 54 45 54 45 0 900083 AAAAATCCGCC GGCGGATTTTT True TGAAAATGA TTTGCCTGA True True - AAAAATCCGCC CCGAAA GGCGGATTTTT TCATTTTCA 84 STM0833 intergenic 900052 900115 + down TCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTTTTTGCCTGAAACGTGCAT TGCTGGCGTAGGTTACCGCTTCTAATCACGTCGGTGAAAATGAAAAATCCGCCTTTCGGGGCGGATTTTTTTTGCCTGAAACGTGCATTATTTTAGTGAAAAAATATCGCTGC ATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTT 45 TTerm_0517 NC_003197.2 900070 900080 11 900087 900097 11 6 100 0 22 54 45 54 45 0 900083 AAAAATCCGCC GGCGGATTTTT True TGAAAATGA TTTGCCTGA True True - AAAAATCCGCC CCGAAA GGCGGATTTTT TCATTTTCA 84 STM0834 intergenic 900052 900115 - down ATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTTTCATTTTCACCGACGTGA GCAGCGATATTTTTTCACTAAAATAATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTTTCATTTTCACCGACGTGATTAGAAGCGGTAACCTACGCCAGCA ATGCACGTTTCAGGCAAAAAAAATCCGCCCCGAAAGGCGGATTTT 45 TTerm_0518 NC_003197.2 954289 954299 11 954307 954317 11 7 90 0 17 95 4 100 0 0 954302 AAATAATAAAT ATTGATTATTT True TTTCATAAA AATTCAATT True False - AAATAATCAAT TGATTGT ATTTATTATTT TTTATGAAA 42 STM0882 intergenic 954246 954525 + down TCTATTCACAATATTTATTTTTATCCCTTAACTATTTCATAAAAATAATAAATACAATCAATTGATTATTTAATTCAATTGGTTGTATTTATATATTACCCTATTTTTGCAAATCAAATCACAAATAATCACTTTAAATCTTTTAATGACTACTTTTGATTATTACAGTGCGTGTAAGGCAAAATTAGACAAGGTGGTTTATCGGGTAACTTTCAATAGCATCAGCGAAGCAATACGTAACGTCAGTAAAGGGGTCAATCATGACAACGAATAGGCACG AGCGTTACTGCGCAGGTCAATATAATCTATTCACAATATTTATTTTTATCCCTTAACTATTTCATAAAAATAATAAATACAATCAATTGATTATTTAATTCAATTGGTTGTATTTATATATTACCCTATTTTTGCAAATCAAATCACAAATAATCACTTTAAATCTTTTAATGACTACTTTTGATTATTACAGTGCGTGTAAGGCAAAATTAGACAAGGTGGTTTATCGGGTAACTTTCAATAGCATCAGCGAAGCAATACGTAACGTCAGTAAAGGGGTCAATCATGACAACGAATAGGCACGCTTATGGAGGGCGTTCAGACGATGT CGTGCCTATTCGTTGTCATGATTGACCCCTTTACTGACGTTACGTATTGCTTCGCTGATGCTATTGAAAGTTACCCGATAAACCACCTTGTCTAATTTTGCCTTACACGCACTGTAATAATCAAAAGTAGTCATTAAAAGATTTAAAGTGATTATTTGTGATTTGATTTGCAAAAATAGGGTAATATATAAATACAACCAATTGAATTAAATAATCAATTGATTGTATTTATTATT 236 TTerm_0519 NC_003197.2 954294 954311 18 954321 954338 18 9 94 0 31 80 19 82 17 0 954315 ATAAATACAATCAATTGA TCAATTGGTTGTATTTAT True TAAAAATAA ATATTACCC True False - ATAAATACAACCAATTGA ATTAAATAA TCAATTGATTGTATTTAT TTATTTTTA 70 STM0882 intergenic 954246 954525 + down TCTATTCACAATATTTATTTTTATCCCTTAACTATTTCATAAAAATAATAAATACAATCAATTGATTATTTAATTCAATTGGTTGTATTTATATATTACCCTATTTTTGCAAATCAAATCACAAATAATCACTTTAAATCTTTTAATGACTACTTTTGATTATTACAGTGCGTGTAAGGCAAAATTAGACAAGGTGGTTTATCGGGTAACTTTCAATAGCATCAGCGAAGCAATACGTAACGTCAGTAAAGGGGTCAATCATGACAACGAATAGGCACG AGCGTTACTGCGCAGGTCAATATAATCTATTCACAATATTTATTTTTATCCCTTAACTATTTCATAAAAATAATAAATACAATCAATTGATTATTTAATTCAATTGGTTGTATTTATATATTACCCTATTTTTGCAAATCAAATCACAAATAATCACTTTAAATCTTTTAATGACTACTTTTGATTATTACAGTGCGTGTAAGGCAAAATTAGACAAGGTGGTTTATCGGGTAACTTTCAATAGCATCAGCGAAGCAATACGTAACGTCAGTAAAGGGGTCAATCATGACAACGAATAGGCACGCTTATGGAGGGCGTTCAGACGATGT CGTGCCTATTCGTTGTCATGATTGACCCCTTTACTGACGTTACGTATTGCTTCGCTGATGCTATTGAAAGTTACCCGATAAACCACCTTGTCTAATTTTGCCTTACACGCACTGTAATAATCAAAAGTAGTCATTAAAAGATTTAAAGTGATTATTTGTGATTTGATTTGCAAAAATAGGGTAATATATAAATACAACCAATTGAATTAAATAATCAATTGATTGTATTTA 231 TTerm_0520 NC_003197.2 958787 958797 11 958803 958813 11 5 90 0 17 40 59 40 60 0 958799 GACGGACAGGT ACTTGTCCGTC True TAAAAAAAG GGATTTATT True False - GACGGACAAGT GGTTA ACCTGTCCGTC CTTTTTTTA 50 STM0888 intergenic 958683 958906 - down ACCAGGCAGGATAAGGCATTCTCGCCGCCGTTCGACAATGGTCAGATGGCGCTGCGCTTATCAAACCTACGATGCATAATATTGAATAAATCCGACGGACAAGTGGTTAACCTGTCCGTCTTTTTTTATCCATTTTAAAATATTTAATCATTTTTATTGCATACAAATTCAATTGATGGCATTGTAAATCTATGCCGCAGACACGGCGCATAATCATAAGATT CTCTGGCGTTTGAGCGGCGCAATTAACCAGGCAGGATAAGGCATTCTCGCCGCCGTTCGACAATGGTCAGATGGCGCTGCGCTTATCAAACCTACGATGCATAATATTGAATAAATCCGACGGACAAGTGGTTAACCTGTCCGTCTTTTTTTATCCATTTTAAAATATTTAATCATTTTTATTGCATACAAATTCAATTGATGGCATTGTAAATCTATGCCGCAGACACGGCGCATAATCATAAGATTACGGGAGTGACATCATGAAAAAGTT ACCAGGCAGGATAAGGCATTCTCGCCGCCGTTCGACAATGGTCAGATGGCGCTGCGCTTATCAAACCTACGATGCATAATATTGAATAAATCCGACGGACAAGTGGTTAACCTGTCCGT 119 TTerm_0521 NC_003197.2 965199 965216 18 965224 965241 18 7 72 0 11 38 61 38 61 0 965219 AACTGAAAACGTACCGCG CGCCGGACGGCTGCAGTT True CCGGATCGA GCACGGGAA True False - AACTGCAGCCGTCCGGCG AACATGG CGCGGTACGTTTTCAGTT TCGATCCGG 70 STM0896 intergenic 964890 965344 - down ATCCCGAAAAAAGCGGATTTCAGCATCAATCCGGTTATCCAGGCGAAATATCTCAGTTATCCGGAGAAGATGTTTGGTCGCGAGCGGAAATTTATTCCCGTGCAACTGCAGCCGTCCGGCGAACATGGCGCGGTACGTTTTCAGTTCGATCCGGTTATTAACACGACTTACGGCAATCCTGAATTCGTTGTGATGCGCTGCCGTGATAATGCAATCAAAGTTATTGGGGAGCATCTGGGATGAAAATCGAATATCAGGACTACGGTGCCGTGGCGAACATCATCATCACCAGCACTGTGTTTGAGTTCCGGAAACATAACCGCGTGGTTGATGCTGCCCTGCTCTGCACACCAGGAATAGTTGCAAACCGTAGTGGAATGTTCTTCATGAAGACGGTTTTGTCCGGTAAATCCCGCGACATGCTGCGTGCGCACAAAACAGTATCGCGGGAGGC ACTTTTTCCGGATATGGAGCGAGTGATCCCGAAAAAAGCGGATTTCAGCATCAATCCGGTTATCCAGGCGAAATATCTCAGTTATCCGGAGAAGATGTTTGGTCGCGAGCGGAAATTTATTCCCGTGCAACTGCAGCCGTCCGGCGAACATGGCGCGGTACGTTTTCAGTTCGATCCGGTTATTAACACGACTTACGGCAATCCTGAATTCGTTGTGATGCGCTGCCGTGATAATGCAATCAAAGTTATTGGGGAGCATCTGGGATGAAAATCGAATATCAGGACTACGGTGCCGTGGCGAACATCATCATCACCAGCACTGTGTTTGAGTTCCGGAAACATAACCGCGTGGTTGATGCTGCCCTGCTCTGCACACCAGGAATAGTTGCAAACCGTAGTGGAATGTTCTTCATGAAGACGGTTTTGTCCGGTAAATCCCGCGACATGCTGCGTGCGCACAAAACAGTATCGCGGGAGGCGACACGATGAACGTGCTCAAACAAC ATCCCGAAAAAAGCGGATTTCAGCATCAATCCGGTTATCCAGGCGAAATATCTCAGTTATCCGGAGAAGATGTTTGGTCGCGAGCGGAAATTTATTCCCGTGCAACTGCAGCCGTCCGGCGAACATGGCGCGGTACGTTTTCAGT 145 TTerm_0522 NC_003197.2 976270 976275 6 976280 976285 6 4 100 0 12 100 0 100 0 0 976277 ATTTTT AAAAAT True TTTGCAAAA ACTGACCTT True False - ATTTTT TCAC AAAAAT TTTTGCAAA 24 STM0905 intergenic 976225 976808 + down TGTTTATAAAATGATATTTTGAATGGGCGCTGTTTTTTTGCAAAATTTTTGTGAAAAAATACTGACCTTTGGGCTCAACGCTCATTCAAAATTTACCTGATACTTCGTGTAGCTCCGCTGGTAACGCGGCGGTGGTCCATCGTTACAGGGCAAATTTCAGGCGAAAAAAAACGCCAAGGGAAGTGGCGGGCAGTAAATACTGAATTTGAAAAAAAGCTACTTCATCATCATTAGCAGGGGAGTCTGAACACTTGACCTGGTTATGCAGACATCAACACCTTGCCTGACTTCATCGGTTAAGTTAAACGGATAAATCTCAAATAAACCATGTAAACCACAGTGTTATTATGCAGGTGTTGCGGTGAATCCCGTTAGCACGGGGCAAATTGATCATCTACTTTTGTTAATCAACGTTGCAGCAGACATGAGCGCCGCGAGTCATGGCTGATCAACCAAAGGCTCACCGGGTAGCGATCGGCACTGCAGCACCTACTCTACCCATTACTTAAATCAAAGGCTACTTCGGTAGCCTTTTCTTTTTCCACTCACCCGATACCCGGGTAATTAGTCTCCCGGACAGGGG CCCCTGTCCGGGAGACTAATTACCCGGGTATCGGGTGAGTGGAAAAAGAAAAGGCTACCGAAGTAGCCTTTGATTTAAGTAATGGGTAGAGTAGGTGCTGCAGTGCCGATCGCTACCCGGTGAGCCTTTGGTTGATCAGCCATGACTCGCGGCGCTCATGTCTGCTGCAACGTTGATTAACAAAAGTAGATGATCAATTTGCCCCGTGCTAACGGGATTCACCGCAACACCTGCATAATAACACTGTGGTTTACATGGTTTATTTGAGATTTATCCGTTTAACTTAACCGATGAAGTCAGGCAAGGTGTTGATGTCTGCATAACCAGGTCAAGTGTTCAGACTCCCCTGCTAATGATGATGAAGTAGCTTTTTTTCAAATTCAGTATTTACTGCCCGCCACTTCCCTTGGCGTTTTTTTTCGCCTGAAATTTGCCCTGTAACGATGGACCACCGCCGCGTTACCAGCGGAGCTACACGAAGTATCAGGTAAATTTTGAATGAGCGTTGAGCCCAAAGGTCAGTATTTTTTCACAAAAA 538 TTerm_0523 NC_003197.2 992216 992223 8 992229 992236 8 5 100 0 16 87 12 87 12 0 992225 CTTTTTAA TTAAAAAG True AAAATGTGC GAGTTTTCA True True - CTTTTTAA AATAC TTAAAAAG GCACATTTT 32 STM0919 intergenic 992118 992238 + down GATATCAATATGTTAAGTATTCTCCGTTTAGTATCGGTTTAGTTTTATTGAGGAACCATAGGGCTGTAAAGGAATCTATCAGTCTGCACAAAATGTGCTTTTTAAGTATTTTAAAAAGGA CACGTTTGAACAGGTTGTCGTTTAGGATATCAATATGTTAAGTATTCTCCGTTTAGTATCGGTTTAGTTTTATTGAGGAACCATAGGGCTGTAAAGGAATCTATCAGTCTGCACAAAATGTGCTTTTTAAGTATTTTAAAAAGGAGTTTTCATGAAGCAGGTTCTCATTG TCCTTTTTAAAATACTTAAAAA 22 TTerm_0524 NC_003197.2 1021744 1021755 12 1021761 1021772 12 5 100 0 24 50 50 50 50 0 1021757 AAAATGCCAGCC GGCTGGCATTTT True GTTAAATAA GCCTCCTGG True True - AAAATGCCAGCC CGATC GGCTGGCATTTT TTATTTAAC 88 STM0942 intergenic 1021675 1021805 + down TCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTTGCCTCCTGGATGTACACAATGAGACAGAGGAGC GGTGGATGCGCTGGCAAGGGAGTAATCTTGCTGACGTCATTTGTCGGCCTGATAAGATGCAACAGTGTCGCCACCAGGCACTGGCGTTAAATAAAAATGCCAGCCGATCGGGCTGGCATTTTGCCTCCTGGATGTACACAATGAGACAGAGGAGCTATGCAACGGCCTCTGCTTCGATGG GCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTT 61 TTerm_0525 NC_003197.2 1021744 1021755 12 1021761 1021772 12 5 100 0 24 50 50 50 50 0 1021757 AAAATGCCAGCC GGCTGGCATTTT True GTTAAATAA GCCTCCTGG True True - AAAATGCCAGCC CGATC GGCTGGCATTTT TTATTTAAC 88 STM0943 intergenic 1021675 1021805 - down GCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTTTTATTTAACGCCAGTGCCTGGTGGCGACACTGTTGCATCTTATCAGGCCGACAAATGACGTCAGCAAGA CCATCGAAGCAGAGGCCGTTGCATAGCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTTTTATTTAACGCCAGTGCCTGGTGGCGACACTGTTGCATCTTATCAGGCCGACAAATGACGTCAGCAAGATTACTCCCTTGCCAGCGCATCCACC GCTCCTCTGTCTCATTGTGTACATCCAGGAGGCAAAATGCCAGCCCGATCGGCTGGCATTT 61 TTerm_0526 NC_003197.2 1025839 1025851 13 1025856 1025868 13 4 84 0 16 61 38 63 36 0 1025853 AAAAAGTCCGTAC GTACGAACTCTTT True AATGCGAAA CTTGAATAT True False - AAAGAGTTCGTAC GAAA GTACGGACTTTTT TTTCGCATT 56 STM0946 intergenic 1025627 1026090 + down CGAAGTTTGATGCAAATGTCAGATCGTATGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATCTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTACGCCGGATAATAGTTAGCCTGATAGCGTTGTGCTCGCGGTAGGCGGATAAGGCGCTTGTAAATTGCGTCATCATCCGGTAATCGACGGGTCAAATGCGAAAAAAAGTCCGTACTTTCGTACGAACTCTTTCTTGAATATGGCGGTGAGGGGGGATTGACTCGCTGCGCTCGCCCTTCGGGCAGTCTCCTCGCAGGCTCGTCGTTTGTCCAACTGGCTGCGCCGCTACTCAGCCCATCCCTGGGCCTCGCCCCTTCGGGGCCAGAGCAAGCTCTGTTCAAAAACGCTCCCGGCGTTTTTGTGTCGAACCCCGGTCGGGTGTTCTCATCCCCCCTGTAGGGTGGCTTTATTGAC CAGCCCGTTTACGGGCCGTAAGTAACGAAGTTTGATGCAAATGTCAGATCGTATGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTATAGGCGCATCTGAAAAACCTCCGGCTATGCCGGAGGATATTTATTTACGCCGGATAATAGTTAGCCTGATAGCGTTGTGCTCGCGGTAGGCGGATAAGGCGCTTGTAAATTGCGTCATCATCCGGTAATCGACGGGTCAAATGCGAAAAAAAGTCCGTACTTTCGTACGAACTCTTTCTTGAATATGGCGGTGAGGGGGGATTGACTCGCTGCGCTCGCCCTTCGGGCAGTCTCCTCGCAGGCTCGTCGTTTGTCCAACTGGCTGCGCCGCTACTCAGCCCATCCCTGGGCCTCGCCCCTTCGGGGCCAGAGCAAGCTCTGTTCAAAAACGCTCCCGGCGTTTTTGTGTCGAACCCCGGTCGGGTGTTCTCATCCCCCCTGTAGGGTGGCTTTATTGACTAGTCCTGATATAGGTTGACAGTTT GTCAATAAAGCCACCCTACAGGGGGGATGAGAACACCCGACCGGGGTTCGACACAAAAACGCCGGGAGCGTTTTTGAACAGAGCTTGCTCTGGCCCCGAAGGGGCGAGGCCCAGGGATGGGCTGAGTAGCGGCGCAGCCAGTTGGACAAACGACGAGCCTGCGAGGAGACTGCCCGAAGGGCGAGCGCAGCGAGTCAATCCCCCCTCACCGCCATATTCAAGAAAGAGTTCGTACGAAAGTACGGACTTTT 251 TTerm_0527 NC_003197.2 1025839 1025851 13 1025856 1025868 13 4 84 0 16 61 38 63 36 0 1025853 AAAAAGTCCGTAC GTACGAACTCTTT True AATGCGAAA CTTGAATAT True False - AAAGAGTTCGTAC GAAA GTACGGACTTTTT TTTCGCATT 56 STM0947 intergenic 1025627 1026090 - down GTCAATAAAGCCACCCTACAGGGGGGATGAGAACACCCGACCGGGGTTCGACACAAAAACGCCGGGAGCGTTTTTGAACAGAGCTTGCTCTGGCCCCGAAGGGGCGAGGCCCAGGGATGGGCTGAGTAGCGGCGCAGCCAGTTGGACAAACGACGAGCCTGCGAGGAGACTGCCCGAAGGGCGAGCGCAGCGAGTCAATCCCCCCTCACCGCCATATTCAAGAAAGAGTTCGTACGAAAGTACGGACTTTTTTTCGCATTTGACCCGTCGATTACCGGATGATGACGCAATTTACAAGCGCCTTATCCGCCTACCGCGAGCACAACGCTATCAGGCTAACTATTATCCGGCGTAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAGATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAGGCGCATACGATCTGACATTTGCATCAAACTTCG AAACTGTCAACCTATATCAGGACTAGTCAATAAAGCCACCCTACAGGGGGGATGAGAACACCCGACCGGGGTTCGACACAAAAACGCCGGGAGCGTTTTTGAACAGAGCTTGCTCTGGCCCCGAAGGGGCGAGGCCCAGGGATGGGCTGAGTAGCGGCGCAGCCAGTTGGACAAACGACGAGCCTGCGAGGAGACTGCCCGAAGGGCGAGCGCAGCGAGTCAATCCCCCCTCACCGCCATATTCAAGAAAGAGTTCGTACGAAAGTACGGACTTTTTTTCGCATTTGACCCGTCGATTACCGGATGATGACGCAATTTACAAGCGCCTTATCCGCCTACCGCGAGCACAACGCTATCAGGCTAACTATTATCCGGCGTAAATAAATATCCTCCGGCATAGCCGGAGGTTTTTCAGATGCGCCTATAAGGCTCTCTTACCAGCCGCGCCCTAACAGGCGCATACGATCTGACATTTGCATCAAACTTCGTTACTTACGGCCCGTAAACGGGCTG GTCAATAAAGCCACCCTACAGGGGGGATGAGAACACCCGACCGGGGTTCGACACAAAAACGCCGGGAGCGTTTTTGAACAGAGCTTGCTCTGGCCCCGAAGGGGCGAGGCCCAGGGATGGGCTGAGTAGCGGCGCAGCCAGTTGGACAAACGACGAGCCTGCGAGGAGACTGCCCGAAGGGCGAGCGCAGCGAGTCAATCCCCCCTCACCGCCATATTCAAGAAAGAGTTCGTACGAAAGTACGGACTTTT 251 TTerm_0528 NC_003197.2 1027405 1027420 16 1027425 1027440 16 4 81 0 17 59 40 61 38 0 1027422 AAAAAAAAGCCCGTAC GTACGAGCTCTTTCTT True CATATGTGA GAATATGGC True False - AAGAAAGAGCTCGTAC GAAA GTACGGGCTTTTTTTT TCACATATG 58 STM0949 intergenic 1027352 1027444 - down ATTCAAGAAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCACATATGACCCGTCCTGAATAGCGTTGACACGTTCCAGACTTAAATCCGGA GTTCGAATCCCCCCCTCACCGCCATATTCAAGAAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTCACATATGACCCGTCCTGAATAGCGTTGACACGTTCCAGACTTAAATCCGGAGAACGTGATGATGACTGAGTTCAAA ATTCAAGAAAGAGCTCGTACGAAAGTACGGGCTTTTTTT 39 TTerm_0529 NC_003197.2 1045108 1045117 10 1045122 1045131 10 4 100 0 20 50 50 50 50 0 1045119 AAAAAGCGCC GGCGCTTTTT True CCTCTTCTA TTATGCCAG True True - AAAAAGCGCC CGAA GGCGCTTTTT TAGAAGAGG 80 STM0963 intergenic 1045087 1045269 + down TCCTCGCTTTCTCCTCTTCTAAAAAGCGCCTTCGGGCGCTTTTTTTATGCCAGTTTGATACCGGACAATAATCCCTACCCTATTAGGGGTAATACTGATTTCGAATGAAGGTCAGTTTTTAACACTATTTTTCTACTTTTTCGATATATATCAGACTTTATAGCGATGCTATCGCTATATAA GAACGGACTGGAATATATCGGCTAATCCTCGCTTTCTCCTCTTCTAAAAAGCGCCTTCGGGCGCTTTTTTTATGCCAGTTTGATACCGGACAATAATCCCTACCCTATTAGGGGTAATACTGATTTCGAATGAAGGTCAGTTTTTAACACTATTTTTCTACTTTTTCGATATATATCAGACTTTATAGCGATGCTATCGCTATATAAAATTCTATACATCGTTTTATTGTTT TTATATAGCGATAGCATCGCTATAAAGTCTGATATATATCGAAAAAGTAGAAAAATAGTGTTAAAAACTGACCTTCATTCGAAATCAGTATTACCCCTAATAGGGTAGGGATTATTGTCCGGTATCAAACTGGCATAAAAAAAGCGCCCGAAGGCGCTTTT 161 TTerm_0530 NC_003197.2 1052639 1052649 11 1052656 1052666 11 6 100 0 22 45 54 45 54 0 1052652 AAACGGCTACC GGTAGCCGTTT True AGACAGCAA AAAAGCGGG True False - AAACGGCTACC CATGAC GGTAGCCGTTT TTGCTGTCT 76 STM0969 intergenic 1052398 1052691 + down CGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTTACAGGTGCCTGGGTTCCAGGCGGAGACCACGGTATTAACAGGCGCCGGGGGCAGCAATAGTTGTCAGACCTTCAACCCAGCAGCAGATAAGCGACTCTGTATTTAATACCTGGTTAGCGCAATATTGTTAACCATGCCTGTCTGATGGCGGGGTCGGGTATTTTAGCGGTAAGAGCGTTATCCAGACAGCAAAACGGCTACCGTCATGGGTAGCCGTTTAAAAGCGGGTAAGATAGCAGGCGAT ACTGCTGGCGCGTAGAAACACATAACGACGCTCTTTTCCACGGCGCTCCTGTCAGGCGAGCGCCTTTTAAGGTTACAGGTGCCTGGGTTCCAGGCGGAGACCACGGTATTAACAGGCGCCGGGGGCAGCAATAGTTGTCAGACCTTCAACCCAGCAGCAGATAAGCGACTCTGTATTTAATACCTGGTTAGCGCAATATTGTTAACCATGCCTGTCTGATGGCGGGGTCGGGTATTTTAGCGGTAAGAGCGTTATCCAGACAGCAAAACGGCTACCGTCATGGGTAGCCGTTTAAAAGCGGGTAAGATAGCAGGCGATTAATACATCACTTTATGACCATACT ATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTT 52 TTerm_0531 NC_003197.2 1052639 1052649 11 1052656 1052666 11 6 100 0 22 45 54 45 54 0 1052652 AAACGGCTACC GGTAGCCGTTT True AGACAGCAA AAAAGCGGG True False - AAACGGCTACC CATGAC GGTAGCCGTTT TTGCTGTCT 76 STM0970 intergenic 1052398 1052691 - down ATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTTTTGCTGTCTGGATAACGCTCTTACCGCTAAAATACCCGACCCCGCCATCAGACAGGCATGGTTAACAATATTGCGCTAACCAGGTATTAAATACAGAGTCGCTTATCTGCTGCTGGGTTGAAGGTCTGACAACTATTGCTGCCCCCGGCGCCTGTTAATACCGTGGTCTCCGCCTGGAACCCAGGCACCTGTAACCTTAAAAGGCGCTCGCCTGACAGGAGCGCCGTGGAAAAGAGCGTCG AGTATGGTCATAAAGTGATGTATTAATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTTTTGCTGTCTGGATAACGCTCTTACCGCTAAAATACCCGACCCCGCCATCAGACAGGCATGGTTAACAATATTGCGCTAACCAGGTATTAAATACAGAGTCGCTTATCTGCTGCTGGGTTGAAGGTCTGACAACTATTGCTGCCCCCGGCGCCTGTTAATACCGTGGTCTCCGCCTGGAACCCAGGCACCTGTAACCTTAAAAGGCGCTCGCCTGACAGGAGCGCCGTGGAAAAGAGCGTCGTTATGTGTTTCTACGCGCCAGCAGT ATCGCCTGCTATCTTACCCGCTTTTAAACGGCTACCCATGACGGTAGCCGTT 52 TTerm_0532 NC_003197.2 1055033 1055044 12 1055051 1055062 12 6 91 0 19 54 45 54 45 0 1055047 AAAAAGGCCCCA TGGAGCCTTTTT True AAGTCATTA TGTACGCTT True True - AAAAAGGCTCCA TATCAG TGGGGCCTTTTT TAATGACTT 70 STM0972 intergenic 1055023 1055099 + down AAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTTTGTACGCTTTTTATGGCGTAATTTCAGTCAAACCCAT GAGTTGTCGCAATATGCTTATATAAAAAGTCATTAAAAAGGCCCCACTGATATGGAGCCTTTTTTGTACGCTTTTTATGGCGTAATTTCAGTCAAACCCATTACATGGTCTGCGTGAAGGTACGAG ATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTT 66 TTerm_0533 NC_003197.2 1055033 1055044 12 1055051 1055062 12 6 91 0 19 54 45 54 45 0 1055047 AAAAAGGCCCCA TGGAGCCTTTTT True AAGTCATTA TGTACGCTT True True - AAAAAGGCTCCA TATCAG TGGGGCCTTTTT TAATGACTT 70 STM0973 intergenic 1055023 1055099 - down ATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTTTAATGACTTT CTCGTACCTTCACGCAGACCATGTAATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTTTAATGACTTTTTATATAAGCATATTGCGACAACTC ATGGGTTTGACTGAAATTACGCCATAAAAAGCGTACAAAAAAGGCTCCATATCAGTGGGGCCTTTT 66 TTerm_0534 NC_003197.2 1058630 1058636 7 1058646 1058652 7 9 100 0 14 14 85 14 85 0 1058640 ACGGGGC GCCCCGT True TAAATAAAA AATATAACG True False - ACGGGGC GCCTTTGCG GCCCCGT TTTTATTTA 76 STM0975 intergenic 1058474 1058703 - down AGGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCGTTTTATTTATTTTCGCTAAACGGCGAAAAATGTAATAACAAGGTTAAATATTGGTTGTTGATATTAAATTAATTGACATAGTGATGTTACTTTATTTGTTGATTACTCCATATTAATTAACCGTGCAGCAGGAGGAGTCAGGAAAAAATTCAACTC CGAAAGCGGCATACTGGTCAAAATAAGGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCGTTTTATTTATTTTCGCTAAACGGCGAAAAATGTAATAACAAGGTTAAATATTGGTTGTTGATATTAAATTAATTGACATAGTGATGTTACTTTATTTGTTGATTACTCCATATTAATTAACCGTGCAGCAGGAGGAGTCAGGAAAAAATTCAACTCTATTTATAATTTTTAAAATTTATTT AGGCCATATGAGTGACTTAGGGTAGGTTTACCCTCTCGGCTGCGTTATATTACGGGGCGCCTTTGCGGCCCCG 73 TTerm_0535 NC_003197.2 1061305 1061310 6 1061320 1061325 6 9 100 0 12 50 50 50 50 0 1061314 CGGATT AATCCG True GAAAATATC GAAGATTCT True False - CGGATT AACCGTATA AATCCG GATATTTTC 48 STM0976 intergenic 1061292 1061470 + down CAGCGAAAATATCGGATTTATACGGTTAATCCGGAAGATTCTGTTGTGTGACGCATGCCGCATTTTCTCCTCGCATTGTTTTACCCATTGCGGCGCGTGTCACTGAATGATAAAACCGATATTCACATGAATAACGTTTGCCTGATGTCTGTCAGGCAGGAAACAATGCAGCGTGGTG AAGCCGGGCTAAACGCGTTGTTTAACAGCGAAAATATCGGATTTATACGGTTAATCCGGAAGATTCTGTTGTGTGACGCATGCCGCATTTTCTCCTCGCATTGTTTTACCCATTGCGGCGCGTGTCACTGAATGATAAAACCGATATTCACATGAATAACGTTTGCCTGATGTCTGTCAGGCAGGAAACAATGCAGCGTGGTGAGGGGAAATGGCTCAGGTCTTTAAT CACCACGCTGCATTGTTTCCTGCCTGACAGACATCAGGCAAACGTTATTCATGTGAATATCGGTTTTATCATTCAGTGACACGCGCCGCAATGGGTAAAACAATGCGAGGAGAAAATGCGGCATGCGTCACACAACAGAATCTTCCGGATTAACCGTATAAATCC 165 TTerm_0536 NC_003197.2 1067931 1067942 12 1067948 1067959 12 5 100 0 24 58 41 58 41 0 1067944 GAAAAAAGCACC GGTGCTTTTTTC True TTGAACCCG ATTTATACG True True - GAAAAAAGCACC CTGAC GGTGCTTTTTTC CGGGTTCAA 80 STM0982 intergenic 1067907 1068128 + down GTTTTAACGCAAAACTTGAACCCGAAAAAAGCACCGTCAGGGTGCTTTTTTCATTTATACGCCGTCAGGCGCAAACGCTATTCGACCGAAAACTGGAAAACGTTTCGCATTTTTTGCTGCGTCTTACATTTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTTTCCCGCACAGGG CGATCGCGCCAATATTTACGGTTAAGTTTTAACGCAAAACTTGAACCCGAAAAAAGCACCGTCAGGGTGCTTTTTTCATTTATACGCCGTCAGGCGCAAACGCTATTCGACCGAAAACTGGAAAACGTTTCGCATTTTTTGCTGCGTCTTACATTTATCAGGTAAAAAACCTGGAATCCGCGCCGTATAGCACAAAATCCCCTCCAGACAATGGCGTCCTGAACCTGCACACTTTCCCGCACAGGGAGGTGTCTATGAAGATAACGACGGT CCCTGTGCGGGAAAGTGTGCAGGTTCAGGACGCCATTGTCTGGAGGGGATTTTGTGCTATACGGCGCGGATTCCAGGTTTTTTACCTGATAAATGTAAGACGCAGCAAAAAATGCGAAACGTTTTCCAGTTTTCGGTCGAATAGCGTTTGCGCCTGACGGCGTATAAATGAAAAAAGCACCCTGACGGTGCTTTTTT 197 TTerm_0537 NC_003197.2 1089731 1089741 11 1089746 1089756 11 4 100 0 22 63 36 63 36 0 1089743 AAAAACAGGAC GTCCTGTTTTT True AGAGATAAA GAGGCATAA True True - AAAAACAGGAC TTCG GTCCTGTTTTT TTTATCTCT 76 STM0999 intergenic 1089612 1089784 - down ATCAGCAGACCCCTTTGTTTTATGCCTCAAAAACAGGACTTCGGTCCTGTTTTTTTATCTCTCTTAGAGAAAATGTGCGTCTTTCAAAAACAGGCGGGCTTTTTAGCGCTAACGGTTGGCATTTTGTAAATCTGCCGTTAACCTGATAGCGGATTTCCCTTCTGTAACTATA CTGTCGGTATTACTTACCAGTTCTGATCAGCAGACCCCTTTGTTTTATGCCTCAAAAACAGGACTTCGGTCCTGTTTTTTTATCTCTCTTAGAGAAAATGTGCGTCTTTCAAAAACAGGCGGGCTTTTTAGCGCTAACGGTTGGCATTTTGTAAATCTGCCGTTAACCTGATAGCGGATTTCCCTTCTGTAACTATAATGGAACCTCGTCATGTTTGAGAAC ATCAGCAGACCCCTTTGTTTTATGCCTCAAAAACAGGACTTCGGTCCTGTTTT 53 TTerm_0538 NC_003197.2 1091065 1091073 9 1091082 1091090 9 8 88 0 13 94 5 100 0 0 1091077 AAATAATAT ATGTTATTT True TCAAAAGGA TTACGGAAC True True - AAATAACAT TTGTTTAC ATATTATTT TCCTTTTGA 34 STM1000 intergenic 1090975 1091482 - down ATTTTTACGTCACACTCAAGGCCAGCTATGCTGGCCTTTTTTTTCGCCTGAATGTCAGTTTTATTATCAATAAGTAAATAAAATTAATTACAACCCTCTGAATTACCACATCTTGTTACTGTATATTTCACGAAAATATTTACACATAAAAATTAATCCTTAATTTTATTGCGGATTAGATTTTTCTGCTCTAATAGCACAATTTTTCACCACAATTTCAGACATCCAGACTTCTAAATGGCTATTTTTATGAAATAGCTCGTCAGCTGCTTTTTCAGGCACAACGGTGTCGCGAACAAATAAATTCAATAAAATCATGGATATAAAAGAAAAACGATCAAATCAAAACGATAACTCAGGGGAAGTTTGACGTTGTTCACAAAGTTCCGTAAAAATAACATTTGTTTACATATTATTTCCTTTTGAAACCAAATCTTTATCTTTGTAGCACTTTCACGGTAGCGAAACGTTAGTTTGAATGGAAAGATGCCTGTCAGACACATAAAG GGACCCCACGCAACGCCAGCTTCTGATTTTTACGTCACACTCAAGGCCAGCTATGCTGGCCTTTTTTTTCGCCTGAATGTCAGTTTTATTATCAATAAGTAAATAAAATTAATTACAACCCTCTGAATTACCACATCTTGTTACTGTATATTTCACGAAAATATTTACACATAAAAATTAATCCTTAATTTTATTGCGGATTAGATTTTTCTGCTCTAATAGCACAATTTTTCACCACAATTTCAGACATCCAGACTTCTAAATGGCTATTTTTATGAAATAGCTCGTCAGCTGCTTTTTCAGGCACAACGGTGTCGCGAACAAATAAATTCAATAAAATCATGGATATAAAAGAAAAACGATCAAATCAAAACGATAACTCAGGGGAAGTTTGACGTTGTTCACAAAGTTCCGTAAAAATAACATTTGTTTACATATTATTTCCTTTTGAAACCAAATCTTTATCTTTGTAGCACTTTCACGGTAGCGAAACGTTAGTTTGAATGGAAAGATGCCTGTCAGACACATAAAGACACCAAACTCTCATCAATATTTCT ATTTTTACGTCACACTCAAGGCCAGCTATGCTGGCCTTTTTTTTCGCCTGAATGTCAGTTTTATTATCAATAAGTAAATAAAATTAATTACAACCCTCTGAATTACCACATCTTGTTACTGTATATTTCACGAAAATATTTACACATAAAAATTAATCCTTAATTTTATTGCGGATTAGATTTTTCTGCTCTAATAGCACAATTTTTCACCACAATTTCAGACATCCAGACTTCTAAATGGCTATTTTTATGAAATAGCTCGTCAGCTGCTTTTTCAGGCACAACGGTGTCGCGAACAAATAAATTCAATAAAATCATGGATATAAAAGAAAAACGATCAAATCAAAACGATAACTCAGGGGAAGTTTGACGTTGTTCACAAAGTTCCGTAAAAATAACATTTGTTTACATATTATT 417 TTerm_0539 NC_003197.2 1093024 1093029 6 1093038 1093043 6 8 100 0 12 33 66 33 66 0 1093033 GTTCGC GCGAAC True TGTAAAAAG CATTGAGAA True False - GTTCGC GAGCAGGT GCGAAC CTTTTTACA 56 STM1001 intergenic 1092891 1093083 - down ACGTGCGCAAAGCTTGCAAAACCAGCCTAAATTCTCAATGGTTCGCGAGCAGGTGCGAACTTTTTACAGGTTTCTTTCTGAAAACCTGCTTCCAGATGCGATTTCTGCTTGTCTGATTGCAGATGCCAGGTAACATAGGAATACCCCCATTTCGGGTGGACAAGTGTTTATTTTTTCCGACTATTAACTAGA AAGAGATGCGCGTCCTGATCGAGTAACGTGCGCAAAGCTTGCAAAACCAGCCTAAATTCTCAATGGTTCGCGAGCAGGTGCGAACTTTTTACAGGTTTCTTTCTGAAAACCTGCTTCCAGATGCGATTTCTGCTTGTCTGATTGCAGATGCCAGGTAACATAGGAATACCCCCATTTCGGGTGGACAAGTGTTTATTTTTTCCGACTATTAACTAGAGAGAATATTATGAGCGTTGTGCCTG ACGTGCGCAAAGCTTGCAAAACCAGCCTAAATTCTCAATGGTTCGCGAGCAGGTGCGAA 59 TTerm_0540 NC_003197.2 1095119 1095124 6 1095132 1095137 6 7 100 0 12 50 50 50 50 0 1095127 ATGCGT ACGCAT True ATGTAAAAA AATAAACCT True False - ATGCGT ATAAAAA ACGCAT TTTTTACAT 48 STM1002 intergenic 1095075 1095314 + down ACATTACGACTAAAAAATTAGATAATAAAGGTAGCATGTAAAAATGCGTTTTTTATACGCATAATAAACCTAATGCAGGAAGCAAGACTTTATAACAATATACCATTAAAACGGCATTTAGTGAGTAAGGGATGCTCCTACCCGCTGACTTTCCAGTTTAGTGTTGTTGGCAAAATTCAGGATTACGCTGAACTGGAAAGATTATTTCTGAGACTGAACGAATTAATTTAAATCCGAGG AGTCTGGAACGGACGCAGTGCTTAAACATTACGACTAAAAAATTAGATAATAAAGGTAGCATGTAAAAATGCGTTTTTTATACGCATAATAAACCTAATGCAGGAAGCAAGACTTTATAACAATATACCATTAAAACGGCATTTAGTGAGTAAGGGATGCTCCTACCCGCTGACTTTCCAGTTTAGTGTTGTTGGCAAAATTCAGGATTACGCTGAACTGGAAAGATTATTTCTGAGACTGAACGAATTAATTTAAATCCGAGGTCATTATGTTAGAGCAACTTTCACA CCTCGGATTTAAATTAATTCGTTCAGTCTCAGAAATAATCTTTCCAGTTCAGCGTAATCCTGAATTTTGCCAACAACACTAAACTGGAAAGTCAGCGGGTAGGAGCATCCCTTACTCACTAAATGCCGTTTTAATGGTATATTGTTATAAAGTCTTGCTTCCTGCATTAGGTTTATTATGCGTATAAAAAACGCA 195 TTerm_0541 NC_003197.2 1095123 1095131 9 1095136 1095144 9 4 88 0 13 88 11 87 12 0 1095133 GTTTTTTAT ATAATAAAC True AAAAATGCG CTAATGCAG True False - GTTTATTAT GCGT ATAAAAAAC CGCATTTTT 26 STM1002 intergenic 1095075 1095314 + down ACATTACGACTAAAAAATTAGATAATAAAGGTAGCATGTAAAAATGCGTTTTTTATACGCATAATAAACCTAATGCAGGAAGCAAGACTTTATAACAATATACCATTAAAACGGCATTTAGTGAGTAAGGGATGCTCCTACCCGCTGACTTTCCAGTTTAGTGTTGTTGGCAAAATTCAGGATTACGCTGAACTGGAAAGATTATTTCTGAGACTGAACGAATTAATTTAAATCCGAGG AGTCTGGAACGGACGCAGTGCTTAAACATTACGACTAAAAAATTAGATAATAAAGGTAGCATGTAAAAATGCGTTTTTTATACGCATAATAAACCTAATGCAGGAAGCAAGACTTTATAACAATATACCATTAAAACGGCATTTAGTGAGTAAGGGATGCTCCTACCCGCTGACTTTCCAGTTTAGTGTTGTTGGCAAAATTCAGGATTACGCTGAACTGGAAAGATTATTTCTGAGACTGAACGAATTAATTTAAATCCGAGGTCATTATGTTAGAGCAACTTTCACA CCTCGGATTTAAATTAATTCGTTCAGTCTCAGAAATAATCTTTCCAGTTCAGCGTAATCCTGAATTTTGCCAACAACACTAAACTGGAAAGTCAGCGGGTAGGAGCATCCCTTACTCACTAAATGCCGTTTTAATGGTATATTGTTATAAAGTCTTGCTTCCTGCATTAGGTTTATTATGCGTATAAAAAA 191 TTerm_0542 NC_003197.2 1105001 1105016 16 1105021 1105036 16 4 81 0 17 59 40 61 38 0 1105018 CATAAAAATAGCACCT AGGTGCTACCTGTATG True TCTTGGAGC GATGAGTTC True False - CATACAGGTAGCACCT CTTT AGGTGCTATTTTTATG GCTCCAAGA 66 STM1012 intergenic 1105009 1105053 - down GAACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCT ATCTAATTAACGACCTCAAAAAATAGAACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCTATTTTTATGCTCCAAGATAGAACTT GAACCAAAGAACTCATCCATACAGGTAGCACCTCTTTAGGTGCTATTTTTAT 52 TTerm_0543 NC_003197.2 1106185 1106198 14 1106203 1106217 15 4 86 6 13 41 58 38 61 0 1106200 GAAAGCCGCGGTGA TCACCAACGGCTTTC True AAAAAGGCG TGGTGCAAA True False - GAAAGCCGTTGGTGA CCCC TCACCGCGGCTTTC CGCCTTTTT 50 STM1013 intergenic 1106162 1106241 + down AAATGGCAGCAACTAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAAAACGGTAGGTAATTG GCCGGATGCGCTGGGGTGGGACTGAAAATGGCAGCAACTAAAAAGGCGAAAGCCGCGGTGAGGGGTCACCAACGGCTTTCTGGTGCAAAAACGGTAGGTAATTGCGGAGATGAGTATGTCAAATACCGC CAATTACCTACCGTTTTTGCACCAGAAAGCCGTTGGTGACCCCTCACCGCGGCTTT 56 TTerm_0544 NC_003197.2 1109236 1109241 6 1109247 1109252 6 5 100 0 12 83 16 83 16 0 1109243 TATTCA TGAATA True AAAAGTGCT TTCTTTCTA True False - TATTCA AGGGG TGAATA AGCACTTTT 32 STM1018 intergenic 1109016 1109302 + down ATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGG AATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTAT CCTCTACATTCAACCACTGTATATAAACACAGTATACCTGTTAGAAAGAATATTCAAGGGGTGAAT 66 TTerm_0545 NC_003197.2 1112316 1112324 9 1112329 1112337 9 4 88 0 13 77 22 75 25 0 1112326 TAATTTAGC GCAAAATTA True GACCAAAAT ACGGAAAAT True False - TAATTTTGC AATA GCTAAATTA ATTTTGGTC 42 STM1022 intergenic 1112309 1112372 + down CCAAAATAATTTAGCTATTGCAAAATTAACGGAAAATGGCTAATCTGATTCCAACGATGGGTT GGTTCTGGGAAACGTGACTCGATGACCAAAATAATTTAGCTATTGCAAAATTAACGGAAAATGGCTAATCTGATTCCAACGATGGGTTATTATGCCTGTGACGTTACAAGAAT AACCCATCGTTGGAATCAGATTAGCCATTTTCCGTTAATTTTGCAATAGCTAAATT 56 TTerm_0546 NC_003197.2 1170318 1170331 14 1170340 1170353 14 8 92 0 23 57 42 53 46 0 1170335 TTTAAATGGCCGGA TCCGGCCTTTTAAA True AATAAAAGT TACAATCAG True True - TTTAAAAGGCCGGA AAGCGATA TCCGGCCATTTAAA ACTTTTATT 86 STM1078 intergenic 1170314 1170359 + down AAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAATACAAT CCCTCGCCTGGGGCTGGCGAAATAAAAGTTTAAATGGCCGGATATCGCTTTCCGGCCTTTTAAATACAATCAGTTACGTAGTCGCGGCGCCTGAA ATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAA 41 TTerm_0547 NC_003197.2 1170318 1170331 14 1170340 1170353 14 8 92 0 23 57 42 53 46 0 1170335 TTTAAATGGCCGGA TCCGGCCTTTTAAA True AATAAAAGT TACAATCAG True True - TTTAAAAGGCCGGA AAGCGATA TCCGGCCATTTAAA ACTTTTATT 86 STM1079 intergenic 1170314 1170359 - down ATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAAACTT TTCAGGCGCCGCGACTACGTAACTGATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAAACTTTTATTTCGCCAGCCCCAGGCGAGGG ATTGTATTTAAAAGGCCGGAAAGCGATATCCGGCCATTTAA 41 TTerm_0548 NC_003197.2 1174218 1174225 8 1174230 1174237 8 4 100 0 16 25 75 25 75 0 1174227 AGCCCTGC GCAGGGCT True AAAAATAAA GGAAGAGGG True False - AGCCCTGC TTAT GCAGGGCT TTTATTTTT 72 STM1085 intergenic 1174179 1174256 - down ATCGACATTCCCCTCTTCCAGCCCTGCTTATGCAGGGCTTTATTTTTTGCTACACTGCCGTCCGTGTTGATTACGCA TTCTGGGCTTCGCCAGCCGCGACTAATCGACATTCCCCTCTTCCAGCCCTGCTTATGCAGGGCTTTATTTTTTGCTACACTGCCGTCCGTGTTGATTACGCAGTGAAACGTTATGTTGATCTTTGAA ATCGACATTCCCCTCTTCCAGCCCTGCTTATGCAGGGC 38 TTerm_0549 NC_003197.2 1207549 1207556 8 1207563 1207570 8 6 100 0 16 37 62 37 62 0 1207559 AAGGCTCC GGAGCCTT True CGAGTAAAA AATTAACCA True False - AAGGCTCC GTCAAT GGAGCCTT TTTTACTCG 72 STM1124 intergenic 1207533 1207585 - down ATACTGTGGTTAATTAAGGCTCCGTCAATGGAGCCTTTTTACTCGCGTCAGA ATGCCAGCCTGATGACAATTGGCTAATACTGTGGTTAATTAAGGCTCCGTCAATGGAGCCTTTTTACTCGCGTCAGAGGACCGTATGAAACGAATTTTCCTT ATACTGTGGTTAATTAAGGCTCCGTCAATGGAGCCT 36 TTerm_0550 NC_003197.2 1220609 1220614 6 1220622 1220627 6 7 100 0 12 100 0 100 0 0 1220617 ATTTTT AAAAAT True ATAAAATAA AAAGTTAAT True False - ATTTTT GTATTTA AAAAAT TTATTTTAT 24 STM1130 intergenic 1220609 1220643 + down TTTTTTAAATACAAAAATAAAGTTAATTGATGAG TGATGGTAATTTATTAATAAAATAATTTTTTAAATACAAAAATAAAGTTAATTGATGAGCGGAGTATTTTATGAAAATCAACAA CTCATCAATTAACTTTATTTTTGTATTTAAAAAA 34 TTerm_0551 NC_003197.2 1227977 1227987 11 1227993 1228003 11 5 100 0 22 36 63 36 63 0 1227989 AAAGCGTGGGG CCCCACGCTTT True AAAATAAAA GTCGTATTC True False - AAAGCGTGGGG AAGAA CCCCACGCTTT TTTTATTTT 84 STM1138 intergenic 1227975 1228014 + down AAAAGCGTGGGGTTCTTCCCCACGCTTTGTCGTATTCAT AGCGAATACGGCGGTCACAAAATAAAAAAGCGTGGGGTTCTTCCCCACGCTTTGTCGTATTCATCAGGATTCTGGCGGTACTGACAGCT ATGAATACGACAAAGCGTGGGGAAGAACCCCACGCTT 37 TTerm_0552 NC_003197.2 1227977 1227987 11 1227993 1228003 11 5 100 0 22 36 63 36 63 0 1227989 AAAGCGTGGGG CCCCACGCTTT True AAAATAAAA GTCGTATTC True False - AAAGCGTGGGG AAGAA CCCCACGCTTT TTTTATTTT 84 STM1139 intergenic 1227975 1228014 - down ATGAATACGACAAAGCGTGGGGAAGAACCCCACGCTTTT AGCTGTCAGTACCGCCAGAATCCTGATGAATACGACAAAGCGTGGGGAAGAACCCCACGCTTTTTTATTTTGTGACCGCCGTATTCGCT ATGAATACGACAAAGCGTGGGGAAGAACCCCACGCTT 37 TTerm_0553 NC_003197.2 1232093 1232105 13 1232110 1232122 13 4 100 0 26 61 38 61 38 0 1232107 AAAAAAACAGGGC GCCCTGTTTTTTT True GCGCTAATA TCGGGAGGA True True - AAAAAAACAGGGC TTAT GCCCTGTTTTTTT TATTAGCGC 92 STM1144 intergenic 1232074 1232127 + down TTTAGCGTCTGCGCTAATAAAAAAACAGGGCATAAGCCCTGTTTTTTTTCGGG CAACGCCACGGCTAACCAGTATTAATTTAGCGTCTGCGCTAATAAAAAAACAGGGCATAAGCCCTGTTTTTTTTCGGGAGGAAATTATGCATACTTTATTGCT CCCGAAAAAAAACAGGGCTTATGCCCTGTTTTTT 34 TTerm_0554 NC_003197.2 1240503 1240514 12 1240520 1240531 12 5 100 0 24 58 41 58 41 0 1240516 AAAAATACCGGC GCCGGTATTTTT True GTGAGGTGA ATAGTGAAA True True - AAAAATACCGGC ATCAC GCCGGTATTTTT TCACCTCAC 88 STM1151 intergenic 1240478 1240542 + down GGTCTTCAGGTCTGGAGTGAGGTGAAAAATACCGGCGTGATGCCGGTATTTTTATAGTGAAATG GGGACGAACATCGTCAGCGAGATAAGGTCTTCAGGTCTGGAGTGAGGTGAAAAATACCGGCGTGATGCCGGTATTTTTATAGTGAAATGAGGTATCAGGTGCGTATATTCGCGG CATTTCACTATAAAAATACCGGCATCACGCCGGTATTTT 39 TTerm_0555 NC_003197.2 1242579 1242587 9 1242592 1242600 9 4 100 0 18 44 55 44 55 0 1242589 ATTGCAGCC GGCTGCAAT True GGGGAAAAA CCTGTCAAT True False - ATTGCAGCC GTCA GGCTGCAAT TTTTTCCCC 76 STM1155 intergenic 1242460 1242605 - down ACAGGATTGCAGCCGTCAGGCTGCAATTTTTCCCCTCTTTTAGCTTTAAAAGCTCCCCACATTGCGAGGCTGGTAAGGTCGGCGCATAATTATAATTAGTACGCTCATAATTAAATTGATGATAGCGCAAACCGCGCATCATACT CTGAAGGCGTACCGTCGCGCTATTGACAGGATTGCAGCCGTCAGGCTGCAATTTTTCCCCTCTTTTAGCTTTAAAAGCTCCCCACATTGCGAGGCTGGTAAGGTCGGCGCATAATTATAATTAGTACGCTCATAATTAAATTGATGATAGCGCAAACCGCGCATCATACTGTGGAACGCTATGTCACCCTCTGAT ACAGGATTGCAGCCGTCAGGCTGCAA 26 TTerm_0556 NC_003197.2 1248143 1248148 6 1248153 1248158 6 4 100 0 12 0 100 0 100 0 1248150 GCCGGG CCCGGC True ATAAAAAAG AAACATACA True False - GCCGGG TCGC CCCGGC CTTTTTTAT 72 STM1162 intergenic 1247907 1248185 - down AAAAATGATATGCAGTGATGTATGTTTGCCGGGTCGCCCCGGCTTTTTTATTTGCGCAACTGATGAATATTTCACCTGACCCTCAAAATAATTGCACAACATCCTAAAAAAATATGAATGAACTGCCGCTTTATTGTTCATATAATTCTTAAAAAGAGAAATTTATCCTCCGGTCTCTTTAAAAACGCAGTGAATAGCCTTATTAATTGGTATACTGAAGTTGCTTCAGAAGAAAAACACGCATTGAACCTCGAGAACCGTTGTCTTATAACACGTAC CTGATGACTGGTTCATCAATGAATAAAAAATGATATGCAGTGATGTATGTTTGCCGGGTCGCCCCGGCTTTTTTATTTGCGCAACTGATGAATATTTCACCTGACCCTCAAAATAATTGCACAACATCCTAAAAAAATATGAATGAACTGCCGCTTTATTGTTCATATAATTCTTAAAAAGAGAAATTTATCCTCCGGTCTCTTTAAAAACGCAGTGAATAGCCTTATTAATTGGTATACTGAAGTTGCTTCAGAAGAAAAACACGCATTGAACCTCGAGAACCGTTGTCTTATAACACGTACCAGGGGGGCATGATGGAAAAGAATA AAAAATGATATGCAGTGATGTATGTTTGCCGGGTCGCCCCGG 42 TTerm_0557 NC_003197.2 1250307 1250315 9 1250323 1250331 9 7 100 0 18 33 66 33 66 0 1250318 AGGCGGCAA TTGCCGCCT True GCTGAAAAA GGCGGGAGT True False - AGGCGGCAA CCCTTTC TTGCCGCCT TTTTTCAGC 68 STM1165 intergenic 1250225 1250340 - down ACTCCCGCCAGGCGGCAACCCTTTCTTGCCGCCTTTTTCAGCTTTTTCTAGTGGCACCATGTCCGCTGGCGCGACATGCTGCTTTGTGTCAAGATTAGGGCACAGGCAACATGCT ATTTACTCTCCTCAATGGCTATCTAACTCCCGCCAGGCGGCAACCCTTTCTTGCCGCCTTTTTCAGCTTTTTCTAGTGGCACCATGTCCGCTGGCGCGACATGCTGCTTTGTGTCAAGATTAGGGCACAGGCAACATGCTAAGGAACGCCATGAAAAAGTTTTTT ACTCCCGCCAGGCGGCAACCCTTTCTTGCCGCC 33 TTerm_0558 NC_003197.2 1268305 1268314 10 1268319 1268328 10 4 100 0 20 40 60 40 60 0 1268316 AAAGCCGACC GGTCGGCTTT True GGCATAAAA GTATCAGCA True False - AAAGCCGACC GCCA GGTCGGCTTT TTTTATGCC 80 STM1184 intergenic 1268087 1268344 + down CACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACAT GTCGCTTTTCCAGTTGAACCGGTAACACCTCTTTTTGAAACATATCACGAAACTGGATATGTTTTGTCTGCCCGCGCCATCCACCCCGGCGCGGGCATTTTTTTAGTCGTCATTGAGTTAGTGGTCATATTGTCGCGCCCGTAGCGACGCCATCCGTACGTATTATCCCGCCCGATCTCATAAACGCCTGGAGTGACTAAAAGACGCCATGGGGTGAGGCATTGCCCTGTAAGGGGCATAAAAAAGCCGACCTGGCGGTCGGCTTTGTATCAGCATTTACATCATTCTACCGGCTGTGGGCGTGTCG ATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTT 39 TTerm_0559 NC_003197.2 1268305 1268314 10 1268319 1268328 10 4 100 0 20 40 60 40 60 0 1268316 AAAGCCGACC GGTCGGCTTT True GGCATAAAA GTATCAGCA True False - AAAGCCGACC GCCA GGTCGGCTTT TTTTATGCC 80 STM1185 intergenic 1268087 1268344 - down ATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTG CGACACGCCCACAGCCGGTAGAATGATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTTTTTTATGCCCCTTACAGGGCAATGCCTCACCCCATGGCGTCTTTTAGTCACTCCAGGCGTTTATGAGATCGGGCGGGATAATACGTACGGATGGCGTCGCTACGGGCGCGACAATATGACCACTAACTCAATGACGACTAAAAAAATGCCCGCGCCGGGGTGGATGGCGCGGGCAGACAAAACATATCCAGTTTCGTGATATGTTTCAAAAAGAGGTGTTACCGGTTCAACTGGAAAAGCGAC ATGTAAATGCTGATACAAAGCCGACCGCCAGGTCGGCTT 39 TTerm_0560 NC_003197.2 1281691 1281701 11 1281707 1281717 11 5 90 0 17 50 50 50 50 0 1281703 AAAAAGGTCCG CGGGCCTTTTT True ACATTAATA TATCAGGCA True True - AAAAAGGCCCG ACAAG CGGACCTTTTT TATTAATGT 82 STM1197 intergenic 1281666 1281779 + down GTTAAGCCAGAGACAGACATTAATAAAAAGGTCCGCTTGTCGGGCCTTTTTTATCAGGCATATCACCTCTTGTTCTGCGTTATTCATCCTGCCACACTAACAGGCGACGGATA TTCCTTGATCTTTAAAAAGATCTAAGTTAAGCCAGAGACAGACATTAATAAAAAGGTCCGCTTGTCGGGCCTTTTTTATCAGGCATATCACCTCTTGTTCTGCGTTATTCATCCTGCCACACTAACAGGCGACGGATAAGGAGCCACTATGTTTTTAATTAAT TATCCGTCGCCTGTTAGTGTGGCAGGATGAATAACGCAGAACAAGAGGTGATATGCCTGATAAAAAAGGCCCGACAAGCGGACCTTTT 88 TTerm_0561 NC_003197.2 1325639 1325657 19 1325663 1325681 19 5 89 0 28 65 34 64 35 0 1325659 TAAAAACAAAAACGGGGAC GTCCCCGTTTTTATTATTA True ATAATTGTT GTATTCGAA True True - TAATAATAAAAACGGGGAC GTTAA GTCCCCGTTTTTGTTTTTA AACAATTAT 96 STM1238 intergenic 1325625 1326065 + down TAACGATAATTGTTAAAAACAAAAACGGGGACTTAACGTCCCCGTTTTTATTATTAGTATTCGAACGGTTATCAAAACTTTATCAAAACTCCCTCAATTCAGACCGCAATAGTAGTTCATCCTTTACCCCGATCGTCATGATAACCTGAGACCCCCCTGAAAGCTGATAGTTACCGATTTTGATTGTAGTGGTTTTCTTAATAATGTGTGATTTGGCTATTTTTTGAAAGTGCCTTACCAGATTTATTGTTATTATCAGGAGAATTTTTTAATAAAAAGTGATGGTTTATTGACTACAATAGTGGGTAGGTTAAGTATTTTATAAAATTATTAGCATGCTTTATTTGCTCTTCTACAAGGCTGCTAAGAAGTGTTGAAATATCAGCCTGATAAAGAATACGTCAGCGAAAGTGAATGCTATATTAGTCATAAAAATTCAG TGACGCGATTATCGCGAATATGTAATAACGATAATTGTTAAAAACAAAAACGGGGACTTAACGTCCCCGTTTTTATTATTAGTATTCGAACGGTTATCAAAACTTTATCAAAACTCCCTCAATTCAGACCGCAATAGTAGTTCATCCTTTACCCCGATCGTCATGATAACCTGAGACCCCCCTGAAAGCTGATAGTTACCGATTTTGATTGTAGTGGTTTTCTTAATAATGTGTGATTTGGCTATTTTTTGAAAGTGCCTTACCAGATTTATTGTTATTATCAGGAGAATTTTTTAATAAAAAGTGATGGTTTATTGACTACAATAGTGGGTAGGTTAAGTATTTTATAAAATTATTAGCATGCTTTATTTGCTCTTCTACAAGGCTGCTAAGAAGTGTTGAAATATCAGCCTGATAAAGAATACGTCAGCGAAAGTGAATGCTATATTAGTCATAAAAATTCAGGAGACATATGCTCAAACCTATCTGC CTGAATTTTTATGACTAATATAGCATTCACTTTCGCTGACGTATTCTTTATCAGGCTGATATTTCAACACTTCTTAGCAGCCTTGTAGAAGAGCAAATAAAGCATGCTAATAATTTTATAAAATACTTAACCTACCCACTATTGTAGTCAATAAACCATCACTTTTTATTAAAAAATTCTCCTGATAATAACAATAAATCTGGTAAGGCACTTTCAAAAAATAGCCAAATCACACATTATTAAGAAAACCACTACAATCAAAATCGGTAACTATCAGCTTTCAGGGGGGTCTCAGGTTATCATGACGATCGGGGTAAAGGATGAACTACTATTGCGGTCTGAATTGAGGGAGTTTTGATAAAGTTTTGATAACCGTTCGAATACTAATAATAAAAACGGGGACGTTAAGTCCCCGTTTTTGTTTTT 426 TTerm_0562 NC_003197.2 1329196 1329204 9 1329211 1329219 9 6 88 0 13 61 38 62 37 0 1329207 AAGAGTCTA TAGGCTCTT True GCGAATAAA AATAAACAA True False - AAGAGCCTA TCCCAT TAGACTCTT TTTATTCGC 50 STM1241 intergenic 1328972 1329456 - down ACGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCTACCACTCAGAACATGTTGTTGTTGATACCTCAGACCGGTATGTGGAACCGACATTCATCGCTTCACTGGCCTGTCGGTATGAGTAGCCCTTATCAACAATCAGCTGTGCGCATTCCAGCCTGAAATCTGAAAGTACGTTTGGTTTTGTTGTTTATTAAGAGCCTATCCCATTAGACTCTTTTATTCGCCAAACTGGCTTTAACGATTACGCCTACTGGGATAGGTTCTAAACTTATCATCAATACGTAAAATACCTATTTACGAACAAAAAGTAACAGGTAAAAATCCGAAATAAAACCAGCATAACTAAAACTTACTGCAGATATGCACACGCATTATTACTATGTTTCCAGGATAGTCTCGACCAGTCAAGACTATCTATTTTATATAAAAAGGGAAATAC CTGATATGTGGCTGGTCGCCGAATAACGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCTACCACTCAGAACATGTTGTTGTTGATACCTCAGACCGGTATGTGGAACCGACATTCATCGCTTCACTGGCCTGTCGGTATGAGTAGCCCTTATCAACAATCAGCTGTGCGCATTCCAGCCTGAAATCTGAAAGTACGTTTGGTTTTGTTGTTTATTAAGAGCCTATCCCATTAGACTCTTTTATTCGCCAAACTGGCTTTAACGATTACGCCTACTGGGATAGGTTCTAAACTTATCATCAATACGTAAAATACCTATTTACGAACAAAAAGTAACAGGTAAAAATCCGAAATAAAACCAGCATAACTAAAACTTACTGCAGATATGCACACGCATTATTACTATGTTTCCAGGATAGTCTCGACCAGTCAAGACTATCTATTTTATATAAAAAGGGAAATACTTCACATGAATAAAATACATGTTAC ACGTCCCCTCCTGCGAAAGCGACATGTCCGATCGAAAACAGCGCCCTGAGGCGCTGTCTGTGACGATATAACGCAAACGCTACCACTCAGAACATGTTGTTGTTGATACCTCAGACCGGTATGTGGAACCGACATTCATCGCTTCACTGGCCTGTCGGTATGAGTAGCCCTTATCAACAATCAGCTGTGCGCATTCCAGCCTGAAATCTGAAAGTACGTTTGGTTTTGTTGTTTATTAAGAGCCTATCCCATTAGACTCT 260 TTerm_0563 NC_003197.2 1333014 1333022 9 1333028 1333036 9 5 88 0 13 50 50 50 50 0 1333024 ATCTGGTGT ACGCCAGAT True GAAGGAAAA CTCACAAGA True False - ATCTGGCGT TATTT ACACCAGAT TTTTCCTTC 58 STM1246 intergenic 1332798 1333199 + down AAAGCATAAGCTATGCGGAAGGTTCGCCTTCCGCACCGCCAGTCAATAAAACAGGGCTTCTTTACCAGTGACACGTACCTGCCTGTCTTTTCTCTCTTCGTCATACTCTCTTCGTCATAGTGACGCTGTACATAACATCTCACTAGCATAAGCACAGATAAAGGATTGTGGTAAGCAATCAAGGTTGCTCAGGTAGGTGATAAGCAGGAAGGAAAATCTGGTGTAAATAACGCCAGATCTCACAAGATTCACTCTGAAAAATTTTCCTGGAATTAATCACAATGTCATCAAGATTTTGTGACCGCCTTCGCATATTGTACCTGCCGCTGAACGACTACTGAAAAGTAGCAAGGTATGTATTTTATCCAGGAGAGCACCTTTTTTGCGCCTGGCAGAAGTCC CGTCGGGGTTGGATACCGTTTCTGAAAAGCATAAGCTATGCGGAAGGTTCGCCTTCCGCACCGCCAGTCAATAAAACAGGGCTTCTTTACCAGTGACACGTACCTGCCTGTCTTTTCTCTCTTCGTCATACTCTCTTCGTCATAGTGACGCTGTACATAACATCTCACTAGCATAAGCACAGATAAAGGATTGTGGTAAGCAATCAAGGTTGCTCAGGTAGGTGATAAGCAGGAAGGAAAATCTGGTGTAAATAACGCCAGATCTCACAAGATTCACTCTGAAAAATTTTCCTGGAATTAATCACAATGTCATCAAGATTTTGTGACCGCCTTCGCATATTGTACCTGCCGCTGAACGACTACTGAAAAGTAGCAAGGTATGTATTTTATCCAGGAGAGCACCTTTTTTGCGCCTGGCAGAAGTCCCCAGCCGCCACTAGCTCAGCTGGAT GGACTTCTGCCAGGCGCAAAAAAGGTGCTCTCCTGGATAAAATACATACCTTGCTACTTTTCAGTAGTCGTTCAGCGGCAGGTACAATATGCGAAGGCGGTCACAAAATCTTGATGACATTGTGATTAATTCCAGGAAAATTTTTCAGAGTGAATCTTGTGAGATCTGGCGTTATTTACACCAGA 185 TTerm_0564 NC_003197.2 1338088 1338096 9 1338101 1338109 9 4 100 0 18 22 77 22 77 0 1338098 AAGCCGGCG CGCCGGCTT True GGGATAAAA ACTGTTGTT True False - AAGCCGGCG ATGC CGCCGGCTT TTTTATCCC 84 STM1254 intergenic 1337981 1338117 - down ACAACAGTAAGCCGGCGATGCCGCCGGCTTTTTATCCCATTTTACGTGCCGCTATCTCTGTCTGTTCCTTGCGACTCAGCCCCCGCTTTAAGGTTCTGTTAAGATTTTACGCATACTCTACAAGCAGTTGTTAATA CCTGTGTTGTCGTAAGAGGACAATAACAACAGTAAGCCGGCGATGCCGCCGGCTTTTTATCCCATTTTACGTGCCGCTATCTCTGTCTGTTCCTTGCGACTCAGCCCCCGCTTTAAGGTTCTGTTAAGATTTTACGCATACTCTACAAGCAGTTGTTAATAAAGGATAATAATAATGGCACATTTC ACAACAGTAAGCCGGCGATGCCGCCGGCT 29 TTerm_0565 NC_003197.2 1345734 1345740 7 1345746 1345752 7 5 100 0 14 14 85 14 85 0 1345742 GGCCACC GGTGGCC True TCAAAAAAG GCTGAGTTT True False - GGCCACC GCGCA GGTGGCC CTTTTTTGA 68 STM1262 intergenic 1345710 1345815 + down GCGGACCAGTTGATATCAAAAAAGGCCACCTGCGCGGTGGCCGCTGAGTTTCTGTTGAAATAAATGCAATGTTATAATATAACAATCATCTTTCTAAGAAAGATG AGGTTCGGGGTTCAATTCCTCGATGGCGGACCAGTTGATATCAAAAAAGGCCACCTGCGCGGTGGCCGCTGAGTTTCTGTTGAAATAAATGCAATGTTATAATATAACAATCATCTTTCTAAGAAAGATGAGGGTAACGTTTTGGTGATTCATTT CATCTTTCTTAGAAAGATGATTGTTATATTATAACATTGCATTTATTTCAACAGAAACTCAGCGGCCACCGCGCAGGTGGC 81 TTerm_0566 NC_003197.2 1368639 1368647 9 1368652 1368660 9 4 100 0 18 44 55 44 55 0 1368649 AAGAGCGAC GTCGCTCTT True GCAAAAAAA ACCAATGAC True False - AAGAGCGAC TCAG GTCGCTCTT TTTTTTTGC 68 STM1290 intergenic 1368361 1368684 - down AGTTGAGATGACACAGTCATTGGTAAGAGCGACTCAGGTCGCTCTTTTTTTTGCTTAAAGATATACCCGTCATACTTCAAGTTGCAGGTGTGTTGGCTATGCTTTCTCACCCGAATCACTGACGGAAGTCGAACTTATCGGGATGAATCAGGGATGTCCATGTCCCTGGCCGGAGATTACCTACGGTTGTTCAAATTCGTTCCCGATGAATTTGTCGTTCACTTGCCGCGTTACTCGGCCTGCGGCCTCGCCTCTACGGGCCAGCGCAAGCACTGGTCAAGGCACAAGCGCCTTGTCATGCAACTCGAATTATTTAGGGTTAA ACCTGATTGCTCACATCTCCAAATAAGTTGAGATGACACAGTCATTGGTAAGAGCGACTCAGGTCGCTCTTTTTTTTGCTTAAAGATATACCCGTCATACTTCAAGTTGCAGGTGTGTTGGCTATGCTTTCTCACCCGAATCACTGACGGAAGTCGAACTTATCGGGATGAATCAGGGATGTCCATGTCCCTGGCCGGAGATTACCTACGGTTGTTCAAATTCGTTCCCGATGAATTTGTCGTTCACTTGCCGCGTTACTCGGCCTGCGGCCTCGCCTCTACGGGCCAGCGCAAGCACTGGTCAAGGCACAAGCGCCTTGTCATGCAACTCGAATTATTTAGGGTTAAGAGGATTGCGTAATGATTAATAAAA AGTTGAGATGACACAGTCATTGGTAAGAGCGACTCAGGTCGCTCT 45 TTerm_0567 NC_003197.2 1399973 1399983 11 1399991 1400001 11 7 100 0 22 45 54 45 54 0 1399986 AAAACGCCGGT ACCGGCGTTTT True GAAAAAACA TAGTGACAG True True - AAAACGCCGGT CTCCAGT ACCGGCGTTTT TGTTTTTTC 84 STM1319 intergenic 1399964 1400066 + down GAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTTTAGTGACAGACATTTTGAGTTGCCGATCGTCATGTCTCAGACGATGTGAACGCCCGATAATGTAT CCAGGAAAACGAAATCGCTGACTAAGAAAAAACAAAACGCCGGTACTGGAGACCGGCGTTTTTAGTGACAGACATTTTGAGTTGCCGATCGTCATGTCTCAGACGATGTGAACGCCCGATAATGTATTATCGATGCGCCAGTTCAGCGTCTT ATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTT 93 TTerm_0568 NC_003197.2 1399973 1399983 11 1399991 1400001 11 7 100 0 22 45 54 45 54 0 1399986 AAAACGCCGGT ACCGGCGTTTT True GAAAAAACA TAGTGACAG True True - AAAACGCCGGT CTCCAGT ACCGGCGTTTT TGTTTTTTC 84 STM1320 intergenic 1399964 1400066 - down ATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTTTGTTTTTTC AAGACGCTGAACTGGCGCATCGATAATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTTTGTTTTTTCTTAGTCAGCGATTTCGTTTTCCTGG ATACATTATCGGGCGTTCACATCGTCTGAGACATGACGATCGGCAACTCAAAATGTCTGTCACTAAAAACGCCGGTCTCCAGTACCGGCGTTT 93 TTerm_0569 NC_003197.2 1403693 1403702 10 1403708 1403717 10 5 100 0 20 50 50 50 50 0 1403704 ATGCCGGATA TATCCGGCAT True ACTGAAAAA GGGCTGTAC True False - ATGCCGGATA CGGGC TATCCGGCAT TTTTTCAGT 64 STM1323 intergenic 1403684 1403727 + down ACTGAAAAATGCCGGATAGCCCGTATCCGGCATGGGCTGTACC CTTTTCCTTGTTAGGCTTCATGTAAACTGAAAAATGCCGGATAGCCCGTATCCGGCATGGGCTGTACCTATACCGCAAGCAGCCGATCCATCG GGTACAGCCCATGCCGGATACGGGCTATCCGGCA 34 TTerm_0570 NC_003197.2 1403693 1403702 10 1403708 1403717 10 5 100 0 20 50 50 50 50 0 1403704 ATGCCGGATA TATCCGGCAT True ACTGAAAAA GGGCTGTAC True False - ATGCCGGATA CGGGC TATCCGGCAT TTTTTCAGT 64 STM1324 intergenic 1403684 1403727 - down GGTACAGCCCATGCCGGATACGGGCTATCCGGCATTTTTCAGT CGATGGATCGGCTGCTTGCGGTATAGGTACAGCCCATGCCGGATACGGGCTATCCGGCATTTTTCAGTTTACATGAAGCCTAACAAGGAAAAG GGTACAGCCCATGCCGGATACGGGCTATCCGGCA 34 TTerm_0571 NC_003197.2 1415576 1415587 12 1415592 1415603 12 4 100 0 24 58 41 58 41 0 1415589 AAAAAAGCCTCC GGAGGCTTTTTT True AACAGCGCA TGTATCTGA True True - AAAAAAGCCTCC ATCA GGAGGCTTTTTT TGCGCTGTT 88 STM1336 intergenic 1415367 1415659 + down GCCAGTGAAAAGAGGGAGCCTGGCTCCCTCTCTTTTATTTACTGTTCAGTGAGTTGACAATTGACCTGTAACCCTTTTCAATAAAGGATATTCGGTTTTACCACATAAGGTAACGCAAGCATGAACGCTGCTATTTTCCGTTTCTTTTTTTACTTTAGCACCTGATCCCAGGAGGCTAGCGCGTGAAAAACGAAACGAAAAACAGCGCAAAAAAGCCTCCTGATGGAGGCTTTTTTTGTATCTGAAATCGAGAGATTACGTCCAATGAACCGGTGTCTTCACCGACACAATG AAAAGCGAAAGCAGCTCTGGCATAAGCCAGTGAAAAGAGGGAGCCTGGCTCCCTCTCTTTTATTTACTGTTCAGTGAGTTGACAATTGACCTGTAACCCTTTTCAATAAAGGATATTCGGTTTTACCACATAAGGTAACGCAAGCATGAACGCTGCTATTTTCCGTTTCTTTTTTTACTTTAGCACCTGATCCCAGGAGGCTAGCGCGTGAAAAACGAAACGAAAAACAGCGCAAAAAAGCCTCCTGATGGAGGCTTTTTTTGTATCTGAAATCGAGAGATTACGTCCAATGAACCGGTGTCTTCACCGACACAATGAGGAAAACCATGTCACATCTCGCAG CATTGTGTCGGTGAAGACACCGGTTCATTGGACGTAATCTCTCGATTTCAGATACAAAAAAAGCCTCCATCAGGAGGCTTTTT 83 TTerm_0572 NC_003197.2 1459864 1459874 11 1459880 1459890 11 5 100 0 22 54 45 54 45 0 1459876 AAAAAAGCGCC GGCGCTTTTTT True ATTAAATAA AAACAAATT True True - AAAAAAGCGCC CTTCC GGCGCTTTTTT TTATTTAAT 84 STM1378 intergenic 1459619 1459917 - down ATAATTGTTGTGTGAATTAATTTGTTTAAAAAAGCGCCCTTCCGGCGCTTTTTTTATTTAATCGATAGCCACTATTAATAAAAAAATCAAATCGGATTTTACTATCTAATTGCGGATTATCTAAGAAGAATCCGATGGAAGCCCCCTGTTTTCTTTCGGTTTTTTAGGGACTTTCATGCATTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCATTCCCATCAAAAAAATATTCTCAACATAAAAAAGTTTGTGTAATACTTGTAACGCTACATGGAGATTAACTCAATCTA ACACCGCCTCTGTTCACGTACTGTAATAATTGTTGTGTGAATTAATTTGTTTAAAAAAGCGCCCTTCCGGCGCTTTTTTTATTTAATCGATAGCCACTATTAATAAAAAAATCAAATCGGATTTTACTATCTAATTGCGGATTATCTAAGAAGAATCCGATGGAAGCCCCCTGTTTTCTTTCGGTTTTTTAGGGACTTTCATGCATTTCGATGCTTCTTTGAGCGAACGATCAAAAATAAGTGCATTCCCATCAAAAAAATATTCTCAACATAAAAAAGTTTGTGTAATACTTGTAACGCTACATGGAGATTAACTCAATCTAGAGGGTATTAATAATGAATCGTACT ATAATTGTTGTGTGAATTAATTTGTTTAAAAAAGCGCCCTTCCGGCGCTTTTT 53 TTerm_0573 NC_003197.2 1483402 1483415 14 1483421 1483433 13 5 85 7 11 48 51 50 50 0 1483417 AAACCGCAGCGTAC GTACGTGAGGTTT True GCGCGCAAA GACTCGCTA True False - AAACCTCACGTAC TACGT GTACGCTGCGGTTT TTTGCGCGC 46 STM1396 intergenic 1483328 1483585 + down AGTAAAAATATCTTAGAGCCTATCCCACCAGGCGTTAATTGGCGCAGCCAGTTTGGACACGGATAGCGCGCAAAAACCGCAGCGTACACGTAGTACGTGAGGTTTGACTCGCTACGCTCGCCCTTCGGGCCGCCGCTAGCGGCGTTCAAAACGCTAACGCGTTTTGGCGAGCACTGCCCAGGTTCAAAATGGCAAGTAAAATAGCCCTAATGGGATAGGCTCTTAGTTAGCACGTTAATTATCTATCGTGTATATGG ACTTGTAGTGAGTGAGCAAGAGTAAAGTAAAAATATCTTAGAGCCTATCCCACCAGGCGTTAATTGGCGCAGCCAGTTTGGACACGGATAGCGCGCAAAAACCGCAGCGTACACGTAGTACGTGAGGTTTGACTCGCTACGCTCGCCCTTCGGGCCGCCGCTAGCGGCGTTCAAAACGCTAACGCGTTTTGGCGAGCACTGCCCAGGTTCAAAATGGCAAGTAAAATAGCCCTAATGGGATAGGCTCTTAGTTAGCACGTTAATTATCTATCGTGTATATGGAGGGGAATGATGATAAAGAAAAAGG CCATATACACGATAGATAATTAACGTGCTAACTAAGAGCCTATCCCATTAGGGCTATTTTACTTGCCATTTTGAACCTGGGCAGTGCTCGCCAAAACGCGTTAGCGTTTTGAACGCCGCTAGCGGCGGCCCGAAGGGCGAGCGTAGCGAGTCAAACCTCACGTACTACGTGTACGCTGCGGTT 183 TTerm_0574 NC_003197.2 1501924 1501930 7 1501939 1501945 7 8 100 0 14 42 57 42 57 0 1501934 ATAGCCG CGGCTAT True TCGAGAAAA CGTCGTATT True False - ATAGCCG TCGCATGG CGGCTAT TTTTCTCGA 60 STM1425 intergenic 1501791 1501953 - down ATACGACGATAGCCGTCGCATGGCGGCTATTTTCTCGACATGTTGCATATTTCCACCGCAATCAGGTGATTTCAGGAAGAAAATTGCGATTTCCCTCTTGCCTCATTGCGGTTGTGACGCTAATATTCGTCCCCGTTGTCACCTACAACGTTGCGTTCATAG TCATTTTGCAGCGCGCTGCGCGATAATACGACGATAGCCGTCGCATGGCGGCTATTTTCTCGACATGTTGCATATTTCCACCGCAATCAGGTGATTTCAGGAAGAAAATTGCGATTTCCCTCTTGCCTCATTGCGGTTGTGACGCTAATATTCGTCCCCGTTGTCACCTACAACGTTGCGTTCATAGCTCAGTTGGTTAGAGCACCACCTTG ATACGACGATAGCCGTCGCATGGCGGCTA 29 TTerm_0575 NC_003197.2 1509372 1509381 10 1509386 1509395 10 4 100 0 20 40 60 40 60 0 1509383 ACGCAGAAGG CCTTCTGCGT True TCTCTAAAA ACTCAGACT True False - ACGCAGAAGG TACG CCTTCTGCGT TTTTAGAGA 64 STM1431 intergenic 1509032 1509404 - down AGTCTGAGTACGCAGAAGGTACGCCTTCTGCGTTTTAGAGAGGGATAGAATAGAGGAGACGCCCACCCTCAGAAGAGAGGAAATCAGTGCAGAGCGGCCGTTAATCCACCTGCGACAATCACGCCCAGAACAATCAGCGTAGTAATCAACGAAAATTTCAGGTCGGTACTCATCAAGTTTTCTCCTTTTTATTCCCACACAAAAAGTGATATAGCGCATTTTTGCACATTCCCGCACAAAAATCTCTCATGTTTTATATTGATAACTGTTTTTAACGCTTCCCCTTTTCCTCAAGATCAGACAAAATTCCAGGCTTACTGAATTAGCGTAACGGCCATTGACCCCTTCCTGACGTTCCGTGTCGTTTTTCCG TTGTTGCGAAAAATCTCGCCGCATAAGTCTGAGTACGCAGAAGGTACGCCTTCTGCGTTTTAGAGAGGGATAGAATAGAGGAGACGCCCACCCTCAGAAGAGAGGAAATCAGTGCAGAGCGGCCGTTAATCCACCTGCGACAATCACGCCCAGAACAATCAGCGTAGTAATCAACGAAAATTTCAGGTCGGTACTCATCAAGTTTTCTCCTTTTTATTCCCACACAAAAAGTGATATAGCGCATTTTTGCACATTCCCGCACAAAAATCTCTCATGTTTTATATTGATAACTGTTTTTAACGCTTCCCCTTTTCCTCAAGATCAGACAAAATTCCAGGCTTACTGAATTAGCGTAACGGCCATTGACCCCTTCCTGACGTTCCGTGTCGTTTTTCCGGCGTGCCGCAACCCTGATGTTGCGA AGTCTGAGTACGCAGAAGGTACGCCTTCTGCG 32 TTerm_0576 NC_003197.2 1512411 1512419 9 1512424 1512432 9 4 100 0 18 11 88 11 88 0 1512421 CGGGCGCAG CTGCGCCCG True TAAAACAAC GCGGGGGAT True False - CGGGCGCAG GTCA CTGCGCCCG GTTGTTTTA 76 STM1435 intergenic 1512340 1512441 - down ATCCCCCGCCGGGCGCAGGTCACTGCGCCCGTTGTTTTACTGCATCCCGGCGTAAAATTTGCCATAATACGCGCTGCATTTTTTCGTATTAAGAGACTCAG ACGCAGGCCGCGGTCTGGGTAACTGATCCCCCGCCGGGCGCAGGTCACTGCGCCCGTTGTTTTACTGCATCCCGGCGTAAAATTTGCCATAATACGCGCTGCATTTTTTCGTATTAAGAGACTCAGATGTCCGATAACGCTCAACTTTCCG ATCCCCCGCCGGGCGCAGGTCACTGCGCCC 30 TTerm_0577 NC_003197.2 1526396 1526404 9 1526410 1526418 9 5 100 0 18 33 66 33 66 0 1526406 GCCGCTAAC GTTAGCGGC True AAAAAAAAG CTGAATGTT True False - GCCGCTAAC TGTGC GTTAGCGGC CTTTTTTTT 60 STM1452 intergenic 1526348 1526441 - down ATTTTCCGGGAAACAACATTCAGGCCGCTAACTGTGCGTTAGCGGCTTTTTTTTTGCTCGTCCCCGCACTACCATACTTTAAACCTCAGCAAA AAGGCTCTAAAGCCGCTACAGTTTAATTTTCCGGGAAACAACATTCAGGCCGCTAACTGTGCGTTAGCGGCTTTTTTTTTGCTCGTCCCCGCACTACCATACTTTAAACCTCAGCAAAAAGGAGTTACCGATGAAACTGTTCT ATTTTCCGGGAAACAACATTCAGGCCGCTAACTGTGCGTTAGCGG 45 TTerm_0578 NC_003197.2 1562020 1562025 6 1562030 1562035 6 4 100 0 12 0 100 0 100 0 1562027 GGCGCG CGCGCC True TAAAAACGG GCAGCATGT True False - GGCGCG CCCC CGCGCC CCGTTTTTA 72 STM1485 intergenic 1561782 1562051 - down AGTCGTAACATGCTGCGGCGCGCCCCCGCGCCCGTTTTTACGGCGCTAAATTGTTCTGGTTTAGCGCCGCCTTCCGGGAGGGCAAAAAAGTGTCTCGCTACCGCTTTGAGCTCATTCTTATCGTGCTTATTTTATGCGCCGTTATTGCCACGCATTTCTATCTTTCCTGAGTGTAGTTATCTGATTTTACTCCCACTTTCTTACCGTCACGTCTATAGTAGTACTGAGGGTTTGTTGTTAATAATCATAATTACCCACCAGAGTGTGAT AACCAACTACTCAACCGGCTGCGTAAGTCGTAACATGCTGCGGCGCGCCCCCGCGCCCGTTTTTACGGCGCTAAATTGTTCTGGTTTAGCGCCGCCTTCCGGGAGGGCAAAAAAGTGTCTCGCTACCGCTTTGAGCTCATTCTTATCGTGCTTATTTTATGCGCCGTTATTGCCACGCATTTCTATCTTTCCTGAGTGTAGTTATCTGATTTTACTCCCACTTTCTTACCGTCACGTCTATAGTAGTACTGAGGGTTTGTTGTTAATAATCATAATTACCCACCAGAGTGTGATATGCATAAAACCATTGCTGTATTAC AGTCGTAACATGCTGCGGCGCGCCCCCGCGC 31 TTerm_0579 NC_003197.2 1572234 1572243 10 1572250 1572259 10 6 100 0 20 50 50 50 50 0 1572246 AAAAGGCAGG CCTGCCTTTT True AATGAGAGA GTGGGGATT True True - AAAAGGCAGG ATTTTA CCTGCCTTTT TCTCTCATT 80 STM1495 intergenic 1571968 1572267 - down ATCCCCACAAAAGGCAGGATTTTACCTGCCTTTTCTCTCATTACGGCCTATTTTTATCTACAAAAAGTGACAACGTCACACCGCGCTTCTATTTTTAAGATAATTCTTTATCGTGAATGTTCACCCTAAGCCGCATAAGGGCAAAGCATAATTGTTAATAGATGTTTAATAGTGTTAAACATCACGCTTCGCTGGAATCCTTCCCAACCTGTTGCTATAGCTCAAAGCACCCTGCCGGAACATGGCATAACAACACGCGACTCTTAACGTCGCCATAACACATGCAAACAGGGAGACAC TCGCTGTAAAACCGTTATTCCGTTAATCCCCACAAAAGGCAGGATTTTACCTGCCTTTTCTCTCATTACGGCCTATTTTTATCTACAAAAAGTGACAACGTCACACCGCGCTTCTATTTTTAAGATAATTCTTTATCGTGAATGTTCACCCTAAGCCGCATAAGGGCAAAGCATAATTGTTAATAGATGTTTAATAGTGTTAAACATCACGCTTCGCTGGAATCCTTCCCAACCTGTTGCTATAGCTCAAAGCACCCTGCCGGAACATGGCATAACAACACGCGACTCTTAACGTCGCCATAACACATGCAAACAGGGAGACACACCGCAATGCACACCCTCACCCTAA ATCCCCACAAAAGGCAGGATTTTACCTGCCTTT 33 TTerm_0580 NC_003197.2 1596818 1596824 7 1596830 1596836 7 5 100 0 14 14 85 14 85 0 1596826 TGCCCCG CGGGGCA True TAAAAAAAT AAGAGGTTA True False - TGCCCCG TTTTG CGGGGCA ATTTTTTTA 76 STM1517 intergenic 1596724 1596843 + down GGCATTATGTTACTAAGAAGACAAACGCTAATTTCAGACCATGCCGCGGGGTAATAGCGGCGGACTTGTCATAGCCAGACGGTACTAAAAAAATGCCCCGCAAAACGGGGCAAAGAGGT CCGTACTGCGCGTGTCAGCGGATGAGGCATTATGTTACTAAGAAGACAAACGCTAATTTCAGACCATGCCGCGGGGTAATAGCGGCGGACTTGTCATAGCCAGACGGTACTAAAAAAATGCCCCGCAAAACGGGGCAAAGAGGTTAAAGGTGTTGGTCGTTATAATAGG ACCTCTTTGCCCCGTTTTGCGGGGC 25 TTerm_0581 NC_003197.2 1596818 1596824 7 1596830 1596836 7 5 100 0 14 14 85 14 85 0 1596826 TGCCCCG CGGGGCA True TAAAAAAAT AAGAGGTTA True False - TGCCCCG TTTTG CGGGGCA ATTTTTTTA 76 STM1518 intergenic 1596724 1596843 - down ACCTCTTTGCCCCGTTTTGCGGGGCATTTTTTTAGTACCGTCTGGCTATGACAAGTCCGCCGCTATTACCCCGCGGCATGGTCTGAAATTAGCGTTTGTCTTCTTAGTAACATAATGCC CCTATTATAACGACCAACACCTTTAACCTCTTTGCCCCGTTTTGCGGGGCATTTTTTTAGTACCGTCTGGCTATGACAAGTCCGCCGCTATTACCCCGCGGCATGGTCTGAAATTAGCGTTTGTCTTCTTAGTAACATAATGCCTCATCCGCTGACACGCGCAGTACGG ACCTCTTTGCCCCGTTTTGCGGGGC 25 TTerm_0582 NC_003197.2 1636009 1636016 8 1636022 1636029 8 5 100 0 16 25 75 25 75 0 1636018 AACCGGCC GGCCGGTT True CAGTAAAAA GGGTCCGGA True False - AACCGGCC TTGAT GGCCGGTT TTTTTACTG 80 STM1557 intergenic 1635940 1636053 + down ATTTTTCGGGCGGTAAACTGACAACGGTGTTATTTCTGCGGCATGATATCGCCTGAGCGCCAGTAAAAAACCGGCCATCAAGGCCGGTTGGGTCCGGAGCGCGGTTTTACTAT CAAAGGAATACCAACAGGCGGATGAATTTTTCGGGCGGTAAACTGACAACGGTGTTATTTCTGCGGCATGATATCGCCTGAGCGCCAGTAAAAAACCGGCCATCAAGGCCGGTTGGGTCCGGAGCGCGGTTTTACTATCAGGGGCGTCTGAATAACACGATAC ATAGTAAAACCGCGCTCCGGACCCAACCGGCCTTGATGGCCGGT 44 TTerm_0583 NC_003197.2 1636009 1636016 8 1636022 1636029 8 5 100 0 16 25 75 25 75 0 1636018 AACCGGCC GGCCGGTT True CAGTAAAAA GGGTCCGGA True False - AACCGGCC TTGAT GGCCGGTT TTTTTACTG 80 STM1558 intergenic 1635940 1636053 - down ATAGTAAAACCGCGCTCCGGACCCAACCGGCCTTGATGGCCGGTTTTTTACTGGCGCTCAGGCGATATCATGCCGCAGAAATAACACCGTTGTCAGTTTACCGCCCGAAAAAT GTATCGTGTTATTCAGACGCCCCTGATAGTAAAACCGCGCTCCGGACCCAACCGGCCTTGATGGCCGGTTTTTTACTGGCGCTCAGGCGATATCATGCCGCAGAAATAACACCGTTGTCAGTTTACCGCCCGAAAAATTCATCCGCCTGTTGGTATTCCTTTG ATAGTAAAACCGCGCTCCGGACCCAACCGGCCTTGATGGCCGGT 44 TTerm_0584 NC_003197.2 1648839 1648851 13 1648858 1648870 13 6 100 0 26 53 46 53 46 0 1648854 AAACAAGGCGCTA TAGCGCCTTGTTT True GCAGATGAA ATCAGATTG True False - AAACAAGGCGCTA TCCTGG TAGCGCCTTGTTT TTCATCTGC 84 STM1567 intergenic 1648797 1648888 + down ACGATTTGCTGTGGTCGTCTGAGTATACAGACAGCAGATGAAAACAAGGCGCTACCAGGATAGCGCCTTGTTTATCAGATTGCGAAAGAAT TATGGTCATCGATTTCCGTCGTTAAACGATTTGCTGTGGTCGTCTGAGTATACAGACAGCAGATGAAAACAAGGCGCTACCAGGATAGCGCCTTGTTTATCAGATTGCGAAAGAATTACTGAATACCTTCTTCGCTCTCTT ATTCTTTCGCAATCTGATAAACAAGGCGCTATCCTGGTAGCGCCTTGTT 49 TTerm_0585 NC_003197.2 1648839 1648851 13 1648858 1648870 13 6 100 0 26 53 46 53 46 0 1648854 AAACAAGGCGCTA TAGCGCCTTGTTT True GCAGATGAA ATCAGATTG True False - AAACAAGGCGCTA TCCTGG TAGCGCCTTGTTT TTCATCTGC 84 STM1568 intergenic 1648797 1648888 - down ATTCTTTCGCAATCTGATAAACAAGGCGCTATCCTGGTAGCGCCTTGTTTTCATCTGCTGTCTGTATACTCAGACGACCACAGCAAATCGT AAGAGAGCGAAGAAGGTATTCAGTAATTCTTTCGCAATCTGATAAACAAGGCGCTATCCTGGTAGCGCCTTGTTTTCATCTGCTGTCTGTATACTCAGACGACCACAGCAAATCGTTTAACGACGGAAATCGATGACCATA ATTCTTTCGCAATCTGATAAACAAGGCGCTATCCTGGTAGCGCCTTGTT 49 TTerm_0586 NC_003197.2 1654817 1654834 18 1654841 1654858 18 6 83 0 21 91 8 93 6 0 1654837 TAAATATGTTAATGTAAT ATTATATTAACAAATATA True AAAATCGTT TAATTAACG True False - TATATTTGTTAATATAAT TACATC ATTACATTAACATATTTA AACGATTTT 42 STM1571 intergenic 1654641 1655153 + down TAGCGACGGGCGGGCCGATATTGATATTAAATCGACCCGCTGTACCTTGACACTCTTCATAACACAACTACGCTTTTATCTATTGCCTGTGCGTATTTAACGATTTTCCATTTTCACGTGCTCCTCCTGCGCCATACCAGGATTGCGCTGGTAAAAATGAATTTTATAAAATCGTTAAATATGTTAATGTAATGATGTAATTATATTAACAAATATATAATTAACGTTAGCTTGCAACTGTTATTAGTGCATATAATAATCAGTGGTTACTACCAAAAATAAAACCATAAACAGCCCAATAGTCCCCTCCGAAAATATATCTTATTAGACAGTCCCTATTTGAATTAATACTCTCAAATGTATTAAGGAGATCTCGATCACACAAATTAAAATAATTTGTAATCTTATGAAACTTATTATTGAACTTATGCCACTCCGTCATTTAAAAATAGTCTGCCATTGACAAACGCCTCGTTTAACAATGGTTGAGGAAACACGCTAAGAAAATTATA TTGGCTGGCAACGCGGCGGCGCTAATAGCGACGGGCGGGCCGATATTGATATTAAATCGACCCGCTGTACCTTGACACTCTTCATAACACAACTACGCTTTTATCTATTGCCTGTGCGTATTTAACGATTTTCCATTTTCACGTGCTCCTCCTGCGCCATACCAGGATTGCGCTGGTAAAAATGAATTTTATAAAATCGTTAAATATGTTAATGTAATGATGTAATTATATTAACAAATATATAATTAACGTTAGCTTGCAACTGTTATTAGTGCATATAATAATCAGTGGTTACTACCAAAAATAAAACCATAAACAGCCCAATAGTCCCCTCCGAAAATATATCTTATTAGACAGTCCCTATTTGAATTAATACTCTCAAATGTATTAAGGAGATCTCGATCACACAAATTAAAATAATTTGTAATCTTATGAAACTTATTATTGAACTTATGCCACTCCGTCATTTAAAAATAGTCTGCCATTGACAAACGCCTCGTTTAACAATGGTTGAGGAAACACGCTAAGAAAATTATAAGGATTATTAAAATGAAACTTAAGT TATAATTTTCTTAGCGTGTTTCCTCAACCATTGTTAAACGAGGCGTTTGTCAATGGCAGACTATTTTTAAATGACGGAGTGGCATAAGTTCAATAATAAGTTTCATAAGATTACAAATTATTTTAATTTGTGTGATCGAGATCTCCTTAATACATTTGAGAGTATTAATTCAAATAGGGACTGTCTAATAAGATATATTTTCGGAGGGGACTATTGGGCTGTTTATGGTTTTATTTTTGGTAGTAACCACTGATTATTATATGCACTAATAACAGTTGCAAGCTAACGTTAATTATATATTTGTTAATATAATTACATCATTACATTAACATATTT 336 TTerm_0587 NC_003197.2 1659134 1659139 6 1659145 1659150 6 5 100 0 12 33 66 33 66 0 1659141 AGAGCG CGCTCT True TTCTCAAAA GTCTCTTTT True True - AGAGCG TCACG CGCTCT TTTTGAGAA 56 STM1575 intergenic 1658986 1659191 + down AGTTACAAATAATTTAATAAAAATCGCTTTTAATTTACAAATAGTAACAATTAAGAAACATCATATCTCCTCATCGCGCCGCGCTGGCCTGGTTTTTTATCTATTCTTTCACTCAATATTCTAAAAAAACTTCAATAAGTTCTCAAAAGAGCGCGTGACGCTCTGTCTCTTTTTTGTGTTTTTCTTCAAATGATATGCGCATGTG GATTACGCTTGAACTCTTTGCGTAAAGTTACAAATAATTTAATAAAAATCGCTTTTAATTTACAAATAGTAACAATTAAGAAACATCATATCTCCTCATCGCGCCGCGCTGGCCTGGTTTTTTATCTATTCTTTCACTCAATATTCTAAAAAAACTTCAATAAGTTCTCAAAAGAGCGCGTGACGCTCTGTCTCTTTTTTGTGTTTTTCTTCAAATGATATGCGCATGTGAGGGGTAAAATGACACGACAAAACG CACATGCGCATATCATTTGAAGAAAAACACAAAAAAGAGACAGAGCGTCACGCGCTC 57 TTerm_0588 NC_003197.2 1686226 1686236 11 1686242 1686252 11 5 81 0 12 40 59 33 66 0 1686238 CATGCCCGGTA TATCGGGCTTG True GGAAAAACC AGGTCAGAA True False - CAAGCCCGATA CAGGT TACCGGGCATG GGTTTTTCC 48 STM1595 intergenic 1686211 1686256 + down CCTGGCGGAAAAACCATGCCCGGTAACCTGTATCGGGCTTGAGGT GCAATTAATTGCCCTGATAGCCTGACCTGGCGGAAAAACCATGCCCGGTAACCTGTATCGGGCTTGAGGTCAGAAAAGCGAAAACAGCAATGCGA ACCTCAAGCCCGATACAGGTTACCGGGCAT 30 TTerm_0589 NC_003197.2 1686226 1686236 11 1686242 1686252 11 5 81 0 12 40 59 33 66 0 1686238 CATGCCCGGTA TATCGGGCTTG True GGAAAAACC AGGTCAGAA True False - CAAGCCCGATA CAGGT TACCGGGCATG GGTTTTTCC 48 STM1596 intergenic 1686211 1686256 - down ACCTCAAGCCCGATACAGGTTACCGGGCATGGTTTTTCCGCCAGG TCGCATTGCTGTTTTCGCTTTTCTGACCTCAAGCCCGATACAGGTTACCGGGCATGGTTTTTCCGCCAGGTCAGGCTATCAGGGCAATTAATTGC ACCTCAAGCCCGATACAGGTTACCGGGCAT 30 TTerm_0590 NC_003197.2 1705336 1705345 10 1705351 1705360 10 5 100 0 20 40 60 40 60 0 1705347 GGGGATAAGC GCTTATCCCC True AATAAAATG TGCAGAGAG True False - GGGGATAAGC GTTTT GCTTATCCCC CATTTTATT 56 STM1615 intergenic 1705332 1705448 + down AATGGGGATAAGCAAAACGCTTATCCCCTGCAGAGAGCGATAACTCTTCTGCCGATCTCCGTCGCCTTCGCCAAAAGACACGCCGGGGATCGGTTCCAGAGTAACCCGAACCGGCA GAAAGTACGCCATATCCGACAATAAAATGGGGATAAGCAAAACGCTTATCCCCTGCAGAGAGCGATAACTCTTCTGCCGATCTCCGTCGCCTTCGCCAAAAGACACGCCGGGGATCGGTTCCAGAGTAACCCGAACCGGCAAGGAGTCAACGATCGATGATTAATG TGCCGGTTCGGGTTACTCTGGAACCGATCCCCGGCGTGTCTTTTGGCGAAGGCGACGGAGATCGGCAGAAGAGTTATCGCTCTCTGCAGGGGATAAGCGTTTTGCTTATCCC 112 TTerm_0591 NC_003197.2 1745677 1745686 10 1745691 1745700 10 4 100 0 20 40 60 40 60 0 1745688 AAGCCCGAAC GTTCGGGCTT True AACAAAAAA GTCAATTTA True False - AAGCCCGAAC GGAT GTTCGGGCTT TTTTTTGTT 72 STM1651 intergenic 1745643 1746114 + down AAAATATTCTAAGGATTAACCTGGAAACAAAAAAAGCCCGAACATCCGTTCGGGCTTGTCAATTTATACGCTGGAAAGCAAAGGTTAACGCAATGGCCCAGCGACAAAATGAATATGTGACAATAAAGGCATATAACAGGCGTAGAATATCGTAACCGAATGATATTGTATAATTTTTATTTTGTATAATACCCCCAAAAGCATTCGTATAAATTATATCTATTTCACTGCGAATTATTTCATTAATTATTGAATTAAACGGTAACATCTCTTTTTAGGTCTTTCCTGACAAGGCAGAAATAACGTTTTAACGTCAACTCGCTGATTATTTACGTGGAATACGCGTAATATTACGTCGCCCTCCCCTGTAGGTAGTCCCCGCAGAGTATCGTGGAGCAGCACCTAAAATGTGACGTATGTCATTGTACATAAAGTGCCTTTAGGGAGTAGAATTTCAGTGGATACTTAAAC AGCGGAAAAACCCGGCGCAGATTAAAAAATATTCTAAGGATTAACCTGGAAACAAAAAAAGCCCGAACATCCGTTCGGGCTTGTCAATTTATACGCTGGAAAGCAAAGGTTAACGCAATGGCCCAGCGACAAAATGAATATGTGACAATAAAGGCATATAACAGGCGTAGAATATCGTAACCGAATGATATTGTATAATTTTTATTTTGTATAATACCCCCAAAAGCATTCGTATAAATTATATCTATTTCACTGCGAATTATTTCATTAATTATTGAATTAAACGGTAACATCTCTTTTTAGGTCTTTCCTGACAAGGCAGAAATAACGTTTTAACGTCAACTCGCTGATTATTTACGTGGAATACGCGTAATATTACGTCGCCCTCCCCTGTAGGTAGTCCCCGCAGAGTATCGTGGAGCAGCACCTAAAATGTGACGTATGTCATTGTACATAAAGTGCCTTTAGGGAGTAGAATTTCAGTGGATACTTAAACAGGAGGTTTTATGAACAGAACGATT GTTTAAGTATCCACTGAAATTCTACTCCCTAAAGGCACTTTATGTACAATGACATACGTCACATTTTAGGTGCTGCTCCACGATACTCTGCGGGGACTACCTACAGGGGAGGGCGACGTAATATTACGCGTATTCCACGTAAATAATCAGCGAGTTGACGTTAAAACGTTATTTCTGCCTTGTCAGGAAAGACCTAAAAAGAGATGTTACCGTTTAATTCAATAATTAATGAAATAATTCGCAGTGAAATAGATATAATTTATACGAATGCTTTTGGGGGTATTATACAAAATAAAAATTATACAATATCATTCGGTTACGATATTCTACGCCTGTTATATGCCTTTATTGTCACATATTCATTTTGTCGCTGGGCCATTGCGTTAACCTTTGCTTTCCAGCGTATAAATTGACAAGCCCGAACGGATGTTCGGGCT 437 TTerm_0592 NC_003197.2 1749933 1749939 7 1749946 1749952 7 6 100 0 14 28 71 28 71 0 1749942 GCCGACT AGTCGGC True AAAAAAAAG GTCGTACGA True False - GCCGACT TAGATT AGTCGGC CTTTTTTTT 60 STM1656 intergenic 1749655 1750142 - down ACAAAAGCGCTTTTCAGACCATTTCGGGTGAAAAAACGCCGAGAAATTTGAGCGAAGTCAATAAACCATCTACCTATTCGGGGCAATATCTCTCTCGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTAGATTAGTCGGCTTTTTTTTGCCTGTAGACTATCTGCGTCTACCCTTTAAGAGTCTGAATGACATTCTGGAGGGTAATATGAGCTGTCTTTTGACCTTATTATATCTACACTCGTCCTTGTCGGACCCGATTCCCACTGACCCTGTTCCCATTCCTGAGCCGCTTCCCCGTCCTCAGCCGATGCCCGACCCGCCGCCGGACGAAGAACCGATTAAAATGTCGCATCAAACGCCCGGATCTGCGAGGATACGCGCCTGCTGACTATGAGTCGTTACCGCGAGAGTAAATT GGTTGCATCGCAGTAAATGGTTGTAACAAAAGCGCTTTTCAGACCATTTCGGGTGAAAAAACGCCGAGAAATTTGAGCGAAGTCAATAAACCATCTACCTATTCGGGGCAATATCTCTCTCGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTAGATTAGTCGGCTTTTTTTTGCCTGTAGACTATCTGCGTCTACCCTTTAAGAGTCTGAATGACATTCTGGAGGGTAATATGAGCTGTCTTTTGACCTTATTATATCTACACTCGTCCTTGTCGGACCCGATTCCCACTGACCCTGTTCCCATTCCTGAGCCGCTTCCCCGTCCTCAGCCGATGCCCGACCCGCCGCCGGACGAAGAACCGATTAAAATGTCGCATCAAACGCCCGGATCTGCGAGGATACGCGCCTGCTGACTATGAGTCGTTACCGCGAGAGTAAATTGTGACCACTTTTTCAACCCTGAATG ACAAAAGCGCTTTTCAGACCATTTCGGGTGAAAAAACGCCGAGAAATTTGAGCGAAGTCAATAAACCATCTACCTATTCGGGGCAATATCTCTCTCGCAGGTGAATGCAACGTCAAGCGATGGGCGTTGCGCTCCATATTGTCTTACTTCCTTTTTTGAATTACTGCATAGCACAATTGATTCGTACGACGCCGACTTAGATTAGTCGG 209 TTerm_0593 NC_003197.2 1751233 1751240 8 1751248 1751255 8 7 100 0 16 37 62 37 62 0 1751243 AAGCGCCT AGGCGCTT True TGCGAAAAA ACCAAACAT True False - AAGCGCCT GTTGCTA AGGCGCTT TTTTTCGCA 72 STM1657 intergenic 1751136 1751271 - down ATAATACATGTTTGGTAAGCGCCTGTTGCTAAGGCGCTTTTTTCGCACGTTCCCGTCATTCTTTTTGCGCAATGAGAAAATGAGAGATTGCTTAACCTTTCCCGAAAGCTAGACTAACGGCATGAGAGTTGTAAC CCATCACCAGGCGCGGCCAGGCCTGATAATACATGTTTGGTAAGCGCCTGTTGCTAAGGCGCTTTTTTCGCACGTTCCCGTCATTCTTTTTGCGCAATGAGAAAATGAGAGATTGCTTAACCTTTCCCGAAAGCTAGACTAACGGCATGAGAGTTGTAACGTGGAGGCGCTGTGGAAGCCATTAA ATAATACATGTTTGGTAAGCGCCTGTTGCTAAGGCGCT 38 TTerm_0594 NC_003197.2 1800160 1800171 12 1800176 1800187 12 4 83 0 14 79 20 90 10 0 1800173 CTCAAAATAATA TATTCTTTTCAG True TTGAACGGC GTCTGGATT True False - CTGAAAAGAATA AACG TATTATTTTGAG GCCGTTCAA 36 STM1705 intergenic 1800135 1800255 + down TCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGTTTTCAT GATTGGTCACCAGGTTGGAAAATAATCCAGACGTTTAAATATTGAACGGCTCAAAATAATACGTTTATTCTTTTCAGGTCTGGATTACAAAAATAGACAAAGTTGACTTTTACGCCACGGTAATTTACAACCGTGGCGTTTTCATTAGCCGCCAGCTAATTTTACTTTCA ATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGA 95 TTerm_0595 NC_003197.2 1800160 1800171 12 1800176 1800187 12 4 83 0 14 79 20 90 10 0 1800173 CTCAAAATAATA TATTCTTTTCAG True TTGAACGGC GTCTGGATT True False - CTGAAAAGAATA AACG TATTATTTTGAG GCCGTTCAA 36 STM1706 intergenic 1800135 1800255 - down ATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGAGCCGTTCAATATTTAAACGTCTGGA TGAAAGTAAAATTAGCTGGCGGCTAATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGAGCCGTTCAATATTTAAACGTCTGGATTATTTTCCAACCTGGTGACCAATC ATGAAAACGCCACGGTTGTAAATTACCGTGGCGTAAAAGTCAACTTTGTCTATTTTTGTAATCCAGACCTGAAAAGAATAAACGTATTATTTTGA 95 TTerm_0596 NC_003197.2 1809740 1809746 7 1809751 1809757 7 4 100 0 14 0 100 0 100 0 1809748 GGGCCGC GCGGCCC True ATAAAAAAG GCTTGACTA True False - GGGCCGC GTAA GCGGCCC CTTTTTTAT 76 STM1714 intergenic 1809569 1809786 - down ACCCCTGCCTGTCGTCACTATAGTCAAGCGGGCCGCGTAAGCGGCCCTTTTTTATATCCCCTTCATATTTAAAGTGGCTTATGTGTTGGCTACGGATTACTCGGCCCATCCATGGGCTCGCCCTGACGGGCCGTCGCACGCGACGTTCAAATCTGCTCCCGGCAGATTTGTCGCTCACCCCAGTCACATCGTTATCTATGCTTCTGGGAACTCACTC GCAAGTGGGTTGAAGGCAAGAAATAACCCCTGCCTGTCGTCACTATAGTCAAGCGGGCCGCGTAAGCGGCCCTTTTTTATATCCCCTTCATATTTAAAGTGGCTTATGTGTTGGCTACGGATTACTCGGCCCATCCATGGGCTCGCCCTGACGGGCCGTCGCACGCGACGTTCAAATCTGCTCCCGGCAGATTTGTCGCTCACCCCAGTCACATCGTTATCTATGCTTCTGGGAACTCACTCCCTTGCCGCCTTTAAGCAACTCGAA ACCCCTGCCTGTCGTCACTATAGTCAAGCGGGCCGCGTAAGCGGCC 46 TTerm_0597 NC_003197.2 1835588 1835597 10 1835603 1835612 10 5 100 0 20 40 60 40 60 0 1835599 AAGGGCTGAC GTCAGCCCTT True CCTAAAAGA GCGATTATA True False - AAGGGCTGAC AATTC GTCAGCCCTT TCTTTTAGG 72 STM1742 intergenic 1835575 1835617 - down ATCGCAAGGGCTGACAATTCGTCAGCCCTTCTTTTAGGTGAG CCTGCCTTAAAGTAGACCCGTTATAATCGCAAGGGCTGACAATTCGTCAGCCCTTCTTTTAGGTGAGGTTACCGTGTCACTTTCTTTGTCGT ATCGCAAGGGCTGACAATTCGTCAGCCCT 29 TTerm_0598 NC_003197.2 1847768 1847782 15 1847788 1847802 15 5 80 0 15 50 50 50 50 0 1847784 TAAAAAAAGCGCCGG CCAGCGCTTCTGTTA True CCCAGGCAT AAAAATTTA True False - TAACAGAAGCGCTGG TAAAT CCGGCGCTTTTTTTA ATGCCTGGG 70 STM1751 intergenic 1847690 1847822 + down TTTACTTCCTGGATGCTTAAAATCCCGCCGCTGGCGGGATTTTTTTTGCCTGAGTTCTCCGCTGACGACCCCAGGCATAAAAAAAGCGCCGGATTTACCAGCGCTTCTGTTAAAAAATTTATAACGTATCGT GGAAGATTTCCTGATCAAGGAATAATTTACTTCCTGGATGCTTAAAATCCCGCCGCTGGCGGGATTTTTTTTGCCTGAGTTCTCCGCTGACGACCCCAGGCATAAAAAAAGCGCCGGATTTACCAGCGCTTCTGTTAAAAAATTTATAACGTATCGTTACTTCTTAATACCCATTTCTTCTT ACGATACGTTATAAATTTTTTAACAGAAGCGCTGGTAAATCCGGCGCTTTTTTT 54 TTerm_0599 NC_003197.2 1847768 1847782 15 1847788 1847802 15 5 80 0 15 50 50 50 50 0 1847784 TAAAAAAAGCGCCGG CCAGCGCTTCTGTTA True CCCAGGCAT AAAAATTTA True False - TAACAGAAGCGCTGG TAAAT CCGGCGCTTTTTTTA ATGCCTGGG 70 STM1752 intergenic 1847690 1847822 - down ACGATACGTTATAAATTTTTTAACAGAAGCGCTGGTAAATCCGGCGCTTTTTTTATGCCTGGGGTCGTCAGCGGAGAACTCAGGCAAAAAAAATCCCGCCAGCGGCGGGATTTTAAGCATCCAGGAAGTAAA AAGAAGAAATGGGTATTAAGAAGTAACGATACGTTATAAATTTTTTAACAGAAGCGCTGGTAAATCCGGCGCTTTTTTTATGCCTGGGGTCGTCAGCGGAGAACTCAGGCAAAAAAAATCCCGCCAGCGGCGGGATTTTAAGCATCCAGGAAGTAAATTATTCCTTGATCAGGAAATCTTCC ACGATACGTTATAAATTTTTTAACAGAAGCGCTGGTAAATCCGGCGCTTTTTTT 54 TTerm_0600 NC_003197.2 1855452 1855460 9 1855465 1855473 9 4 100 0 18 44 55 44 55 0 1855462 AAACTCCGC GCGGAGTTT True CCATAAAAA AGGGCATCG True False - AAACTCCGC TTCG GCGGAGTTT TTTTTATGG 76 STM1761 intergenic 1855255 1855491 - down ATTTTCTCTCGATGCCCTAAACTCCGCTTCGGCGGAGTTTTTTTATGGCTGTTTGCCGGAGTGCGGCATAAATGCCTTATCGACCGCCGCCTTGTTTCGTTTACAGCGGGTCTGCCATGTCTGGCATCTGAATCCGTACTCTTTGTTTTTGGGTTTATTCAGCATCTGTGCGAGTTTTTTGTAAGCAGAAAAATGATGATGCAGCATATAATCACGCCATAAACGACAATAAGGAT ACCAGATTGTTCGTGCACGTCACTGATTTTCTCTCGATGCCCTAAACTCCGCTTCGGCGGAGTTTTTTTATGGCTGTTTGCCGGAGTGCGGCATAAATGCCTTATCGACCGCCGCCTTGTTTCGTTTACAGCGGGTCTGCCATGTCTGGCATCTGAATCCGTACTCTTTGTTTTTGGGTTTATTCAGCATCTGTGCGAGTTTTTTGTAAGCAGAAAAATGATGATGCAGCATATAATCACGCCATAAACGACAATAAGGATAGTTGTATGCGTTTTTCATCAATTT ATTTTCTCTCGATGCCCTAAACTCCGCTTCGGCGGAGTT 39 TTerm_0601 NC_003197.2 1862503 1862508 6 1862516 1862521 6 7 100 0 12 0 100 0 100 0 1862511 GCGCGG CCGCGC True AAAAAAAAG AAAGGATAA True False - GCGCGG CGTTAGA CCGCGC CTTTTTTTT 72 STM1765 intergenic 1862248 1862538 - down ACTTTTGATTATCCTTTGCGCGGCGTTAGACCGCGCTTTTTTTTATCTGTATTTAGTTACAACATACTTATAATCAAGAAGAGAGACGCGGCAGGGCTAACCACGCACATCTTTATCGGTCATCCAGGGGGATACCCCTTAATACCCACTTGTTGAAAATTTAACATTCATGTCGTGCGTAAATTTAATTTTATGTAATTAAATCAGTAATATATATAAATAAAACTCCTCCTCCCAAAGGAGTATGCAGGAGGTTTGCGCGCCATTTGCATCCCTGTCCGCCTTGATCG GACGTCATTCTAAAAATAAAAAGTAACTTTTGATTATCCTTTGCGCGGCGTTAGACCGCGCTTTTTTTTATCTGTATTTAGTTACAACATACTTATAATCAAGAAGAGAGACGCGGCAGGGCTAACCACGCACATCTTTATCGGTCATCCAGGGGGATACCCCTTAATACCCACTTGTTGAAAATTTAACATTCATGTCGTGCGTAAATTTAATTTTATGTAATTAAATCAGTAATATATATAAATAAAACTCCTCCTCCCAAAGGAGTATGCAGGAGGTTTGCGCGCCATTTGCATCCCTGTCCGCCTTGATCGTTATCAATTCTCACGCCCATTCAGC ACTTTTGATTATCCTTTGCGCGGCGTTAGACCGCG 35 TTerm_0602 NC_003197.2 1870357 1870364 8 1870371 1870378 8 6 100 0 16 37 62 37 62 0 1870367 GCCGGATA TATCCGGC True ATAAAAAAG CTACACAAG True False - GCCGGATA AGATAC TATCCGGC CTTTTTTAT 56 STM1771 intergenic 1870347 1870401 + down TATAAAAAAGCCGGATAGTATCTTATCCGGCCTACACAAGCTAAAAACCGCAAT CTATCTGATGACGATTTTTGCCTGATATAAAAAAGCCGGATAGTATCTTATCCGGCCTACACAAGCTAAAAACCGCAATCAGTTCTCGGTATCCAGCTCGTCGA ATTGCGGTTTTTAGCTTGTGTAGGCCGGATAAGATACTATCCGG 44 TTerm_0603 NC_003197.2 1870357 1870364 8 1870371 1870378 8 6 100 0 16 37 62 37 62 0 1870367 GCCGGATA TATCCGGC True ATAAAAAAG CTACACAAG True False - GCCGGATA AGATAC TATCCGGC CTTTTTTAT 56 STM1772 intergenic 1870347 1870401 - down ATTGCGGTTTTTAGCTTGTGTAGGCCGGATAAGATACTATCCGGCTTTTTTATA TCGACGAGCTGGATACCGAGAACTGATTGCGGTTTTTAGCTTGTGTAGGCCGGATAAGATACTATCCGGCTTTTTTATATCAGGCAAAAATCGTCATCAGATAG ATTGCGGTTTTTAGCTTGTGTAGGCCGGATAAGATACTATCCGG 44 TTerm_0604 NC_003197.2 1882962 1882972 11 1882977 1882987 11 4 100 0 22 54 45 54 45 0 1882974 AAAATCCACGC GCGTGGATTTT True AAAGTCATA TTATTTCAT True True - AAAATCCACGC GGCT GCGTGGATTTT TATGACTTT 84 STM1784 intergenic 1882903 1883062 + down ATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTTTTATTTCATAATATCTCAACTCATACTGACAGGCTCAATTAACGCAGAGCTAACAGGGTAAGTTCTTTTCTTAAT AATGAACTTCCTGTTCAACGTCTAAATAAAATTTGTTGTCTCGTGAGGTTTTGCTGAATCTCATAAGAGGCAAAGAAAGTCATAAAATCCACGCAGCCGCGTGGATTTTTTATTTCATAATATCTCAACTCATACTGACAGGCTCAATTAACGCAGAGCTAACAGGGTAAGTTCTTTTCTTAATTACCAGTCGACATTCACTGTATGGT ATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTT 100 TTerm_0605 NC_003197.2 1882962 1882972 11 1882977 1882987 11 4 100 0 22 54 45 54 45 0 1882974 AAAATCCACGC GCGTGGATTTT True AAAGTCATA TTATTTCAT True True - AAAATCCACGC GGCT GCGTGGATTTT TATGACTTT 84 STM1785 intergenic 1882903 1883062 - down ATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTTTATGACTTTCTTTGCCTCTTATGAGATTCAGCAAAACCTCACGAGACAACAAATTTTAT ACCATACAGTGAATGTCGACTGGTAATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTTTATGACTTTCTTTGCCTCTTATGAGATTCAGCAAAACCTCACGAGACAACAAATTTTATTTAGACGTTGAACAGGAAGTTCATT ATTAAGAAAAGAACTTACCCTGTTAGCTCTGCGTTAATTGAGCCTGTCAGTATGAGTTGAGATATTATGAAATAAAAAATCCACGCGGCTGCGTGGATTT 100 TTerm_0606 NC_003197.2 1894870 1894879 10 1894886 1894895 10 6 100 0 20 60 40 60 40 0 1894882 AAAATCCACG CGTGGATTTT True ATTGCGCTA TTGTCTGTA True True - AAAATCCACG CCGGGA CGTGGATTTT TAGCGCAAT 72 STM1795 intergenic 1894850 1894974 + down GGCGACAAATCATTGCGCTAAAATCCACGTCCCGGCGTGGATTTTTTGTCTGTATACCCCGTTTTCCACGCGCGCGCCGATAAATTCTGTCTCAATAAAATGTCTGTTTGTTCGCAAAATAGCG AGATCGCGGTATCTATCCAGGTTAAGGCGACAAATCATTGCGCTAAAATCCACGTCCCGGCGTGGATTTTTTGTCTGTATACCCCGTTTTCCACGCGCGCGCCGATAAATTCTGTCTCAATAAAATGTCTGTTTGTTCGCAAAATAGCGGTTCAATCACGCGTATCTGGTCATC CGCTATTTTGCGAACAAACAGACATTTTATTGAGACAGAATTTATCGGCGCGCGCGTGGAAAACGGGGTATACAGACAAAAAATCCACGCCGGGACGTGGATTT 104 TTerm_0607 NC_003197.2 1909089 1909105 17 1909111 1909127 17 5 94 0 29 73 26 75 25 0 1909107 GTGATTAAAAGGTGTAT ATACATCTTTTAATCAC True GTTTGCCAG CACATCAGG True True - GTGATTAAAAGATGTAT TTAAT ATACACCTTTTAATCAC CTGGCAAAC 66 STM1807 intergenic 1909038 1909141 + down TACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGAT AAAACGCGACCTGTTCGGTCGTTGATACACACGCTCCTTCGGGAGCGTTTTTTTTGCCCGAAGCGTTGTTTGCCAGTGATTAAAAGGTGTATATTAAATACATCTTTTAATCACCACATCAGGGAGATGTCTTATGTCCCACTTACGCATCCC ATCTCCCTGATGTGGTGATTAAAAGATGTATTTAATATACACCTTTTAATCA 52 TTerm_0608 NC_003197.2 1913921 1913933 13 1913938 1913950 13 4 100 0 26 69 30 69 30 0 1913935 TAAAAAAGGCAGA TCTGCCTTTTTTA True TCCTGGATT TTTTTTTAC True True - TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA AATCCAGGA 84 STM1816 intergenic 1913894 1914016 + down GCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTATTTTTTTACATTATTCCGAATACGGACATTTATTTCACTGGCCGTTTTCCCGGCAATTACCGTCGT GCCGGAAGCCGAAGAGTCAAAATAAGCTCTTTTATGGGAAAATTCCTGGATTAAAAAAGGCAGAAGAATCTGCCTTTTTTATTTTTTTACATTATTCCGAATACGGACATTTATTTCACTGGCCGTTTTCCCGGCAATTACCGTCGTTAAAGCGGATACTCCTGCAACAGAA ACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTT 95 TTerm_0609 NC_003197.2 1913921 1913933 13 1913938 1913950 13 4 100 0 26 69 30 69 30 0 1913935 TAAAAAAGGCAGA TCTGCCTTTTTTA True TCCTGGATT TTTTTTTAC True True - TAAAAAAGGCAGA TTCT TCTGCCTTTTTTA AATCCAGGA 84 STM1817 intergenic 1913894 1914016 - down ACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTTAATCCAGGAATTTTCCCATAAAAGAGC TTCTGTTGCAGGAGTATCCGCTTTAACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTTAATCCAGGAATTTTCCCATAAAAGAGCTTATTTTGACTCTTCGGCTTCCGGC ACGACGGTAATTGCCGGGAAAACGGCCAGTGAAATAAATGTCCGTATTCGGAATAATGTAAAAAAATAAAAAAGGCAGATTCTTCTGCCTTTTTT 95 TTerm_0610 NC_003197.2 1915175 1915181 7 1915187 1915193 7 5 100 0 14 14 85 14 85 0 1915183 ACGCCGG CCGGCGT True CAAAAAAAA CTCTCGTTA True False - ACGCCGG TTAAG CCGGCGT TTTTTTTTG 76 STM1818 intergenic 1915154 1915216 - down AGCGTTAAGTCAGCTAACGAGAGACGCCGGTTAAGCCGGCGTTTTTTTTGGCGCGAACCAAA GTGGCAAAGTAGACAATAAAGCCTGAGCGTTAAGTCAGCTAACGAGAGACGCCGGTTAAGCCGGCGTTTTTTTTGGCGCGAACCAAAGAGAACACGATTTGAATTACCAAAT AGCGTTAAGTCAGCTAACGAGAGACGCCGGTTAAGCCGGCG 41 TTerm_0611 NC_003197.2 1937608 1937622 15 1937630 1937644 15 7 100 0 30 66 33 66 33 0 1937625 AAAAAAAGCAGCTAC GTAGCTGCTTTTTTT True GATGTTATA TAACGTCAT True True - AAAAAAAGCAGCTAC GAAAAAT GTAGCTGCTTTTTTT TATAACATC 84 STM1841 intergenic 1937456 1937668 + down GCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTTTAACGTCATGCTAATAACGTTGCT CGCCACCGTGGTGGATAATGGCTAAGCGGCAATAAATAATTTCACAGTGAAACTATCACCAATAATTCCCCTATATTGGCTGTTGTTCATAAGTACTGTTAAATAATATTTTAATAACCGTTAAATAAGCCGACAGATATTATCTACTTTTACGATTTCATCCCACCCGATGTTATAAAAAAAGCAGCTACATTTTTCGTAGCTGCTTTTTTTTAACGTCATGCTAATAACGTTGCTTAGAAGGGATAATCGTTGTAACCCA AGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTT 60 TTerm_0612 NC_003197.2 1937608 1937622 15 1937630 1937644 15 7 100 0 30 66 33 66 33 0 1937625 AAAAAAAGCAGCTAC GTAGCTGCTTTTTTT True GATGTTATA TAACGTCAT True True - AAAAAAAGCAGCTAC GAAAAAT GTAGCTGCTTTTTTT TATAACATC 84 STM1842 intergenic 1937456 1937668 - down AGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTTTATAACATCGGGTGGGATGAAATCGTAAAAGTAGATAATATCTGTCGGCTTATTTAACGGTTATTAAAATATTATTTAACAGTACTTATGAACAACAGCCAATATAGGGGAATTATTGGTGATAGTTTCACTGTGAAATTATTTATTGCCGC TGGGTTACAACGATTATCCCTTCTAAGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTTTATAACATCGGGTGGGATGAAATCGTAAAAGTAGATAATATCTGTCGGCTTATTTAACGGTTATTAAAATATTATTTAACAGTACTTATGAACAACAGCCAATATAGGGGAATTATTGGTGATAGTTTCACTGTGAAATTATTTATTGCCGCTTAGCCATTATCCACCACGGTGGCG AGCAACGTTATTAGCATGACGTTAAAAAAAAGCAGCTACGAAAAATGTAGCTGCTTTTTT 60 TTerm_0613 NC_003197.2 1940010 1940020 11 1940025 1940035 11 4 100 0 22 45 54 45 54 0 1940022 AAAAGCGCGTC GACGCGCTTTT True GGCGTAAAA CATACTTGC True True - AAAAGCGCGTC GAAT GACGCGCTTTT TTTTACGCC 84 STM1843 intergenic 1940008 1940056 + down AAAAAGCGCGTCATTCGACGCGCTTTTCATACTTGCCAGTGGGCTTAT TACGCAACCACGCGTTCAGGCGTAAAAAAAGCGCGTCATTCGACGCGCTTTTCATACTTGCCAGTGGGCTTATTATTTCAGGTACTCGCCGCTACGCA ATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTT 46 TTerm_0614 NC_003197.2 1940010 1940020 11 1940025 1940035 11 4 100 0 22 45 54 45 54 0 1940022 AAAAGCGCGTC GACGCGCTTTT True GGCGTAAAA CATACTTGC True True - AAAAGCGCGTC GAAT GACGCGCTTTT TTTTACGCC 84 STM1844 intergenic 1940008 1940056 - down ATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTTTT TGCGTAGCGGCGAGTACCTGAAATAATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTTTTTTACGCCTGAACGCGTGGTTGCGTA ATAAGCCCACTGGCAAGTATGAAAAGCGCGTCGAATGACGCGCTTT 46 TTerm_0615 NC_003197.2 1941096 1941101 6 1941111 1941116 6 9 100 0 12 100 0 100 0 0 1941105 AAAAAA TTTTTT True TTGTTAAAA GTGCCTGTT True False - AAAAAA TTGTGCCTG TTTTTT TTTTAACAA 24 STM1845 intergenic 1940954 1941131 - down ACGCTAAACAGGCACAAAAAATTGTGCCTGTTTTTTTTTAACAAGCGCAGAAGTCGTCAGGATAATGCTACAAAATGTAAAGTTGTGTTTTTCTCGTGACTTACCGCCTGGTGATGCTTGAAAATAGCCATAAGACCCATACGATGTGGGTAATCGCATAGTGCGCTTTGTTAAATT CGGAGCAGGCGGCAGCCAATAAGTAACGCTAAACAGGCACAAAAAATTGTGCCTGTTTTTTTTTAACAAGCGCAGAAGTCGTCAGGATAATGCTACAAAATGTAAAGTTGTGTTTTTCTCGTGACTTACCGCCTGGTGATGCTTGAAAATAGCCATAAGACCCATACGATGTGGGTAATCGCATAGTGCGCTTTGTTAAATTGAGGTTAAAAGAAAATTATGATGCG ACGCTAAACAGGCACAAAAAATTGTGCCTGTTTTT 35 TTerm_0616 NC_003197.2 1941099 1941110 12 1941115 1941126 12 4 100 0 24 58 41 58 41 0 1941112 AAACAGGCACAA TTGTGCCTGTTT True TTAAAAAAA AGCGTTACT True False - AAACAGGCACAA AAAA TTGTGCCTGTTT TTTTTTTAA 72 STM1845 intergenic 1940954 1941131 - down ACGCTAAACAGGCACAAAAAATTGTGCCTGTTTTTTTTTAACAAGCGCAGAAGTCGTCAGGATAATGCTACAAAATGTAAAGTTGTGTTTTTCTCGTGACTTACCGCCTGGTGATGCTTGAAAATAGCCATAAGACCCATACGATGTGGGTAATCGCATAGTGCGCTTTGTTAAATT CGGAGCAGGCGGCAGCCAATAAGTAACGCTAAACAGGCACAAAAAATTGTGCCTGTTTTTTTTTAACAAGCGCAGAAGTCGTCAGGATAATGCTACAAAATGTAAAGTTGTGTTTTTCTCGTGACTTACCGCCTGGTGATGCTTGAAAATAGCCATAAGACCCATACGATGTGGGTAATCGCATAGTGCGCTTTGTTAAATTGAGGTTAAAAGAAAATTATGATGCG ACGCTAAACAGGCACAAAAAATTGTGCCTGTT 32 TTerm_0617 NC_003197.2 1950371 1950380 10 1950389 1950398 10 8 90 0 15 55 45 55 44 0 1950384 AAAGAACCCG CGGGTTATTT True TGACTCAAA ATTCTTCCT True False - AAATAACCCG CCTGGCGA CGGGTTCTTT TTTGAGTCA 62 STM1851 intergenic 1950365 1950467 + down CTCAAAAAGAACCCGTCGCCAGGCGGGTTATTTATTCTTCCTTTTCTCATTTCCCCCCTGCGCTAACCTCTCCTACACTATCGTGTAAAGTAGTTAACATTG TGCCTGGGTCATGCGTCTTGCCTGACTCAAAAAGAACCCGTCGCCAGGCGGGTTATTTATTCTTCCTTTTCTCATTTCCCCCCTGCGCTAACCTCTCCTACACTATCGTGTAAAGTAGTTAACATTGAGGATGTAATGTTCGCGCTGGTACT CAATGTTAACTACTTTACACGATAGTGTAGGAGAGGTTAGCGCAGGGGGGAAATGAGAAAAGGAAGAATAAATAACCCGCCTGGCGACGGGTTCTT 96 TTerm_0618 NC_003197.2 1951477 1951496 20 1951503 1951522 20 6 90 0 30 32 67 33 66 0 1951499 TAACTGGCTGCGCCAGGGGA TCCCCTGGCGCAGCGAGCTA True ATAAAATAT CTCACTATC True False - TAGCTCGCTGCGCCAGGGGA TAACCC TCCCCTGGCGCAGCCAGTTA ATATTTTAT 92 STM1854 intergenic 1951346 1951560 - down AGGAGGAAGAGTATTGAAGGTGAACAGGCGATAGTGAGTAGCTCGCTGCGCCAGGGGATAACCCTCCCCTGGCGCAGCCAGTTATATTTTATTGCGATGATAACAAAGCATTTACTCGCTAATGGTGAAATTCGCTATTTACAACAGCGCACGCTTACTAAGCAAAAAAATCTGCACACGCTATCTTTTTATATCTGTCCTGGATAATGAACGA GGTTTATGTTTCCGATATGTTTTTAAGGAGGAAGAGTATTGAAGGTGAACAGGCGATAGTGAGTAGCTCGCTGCGCCAGGGGATAACCCTCCCCTGGCGCAGCCAGTTATATTTTATTGCGATGATAACAAAGCATTTACTCGCTAATGGTGAAATTCGCTATTTACAACAGCGCACGCTTACTAAGCAAAAAAATCTGCACACGCTATCTTTTTATATCTGTCCTGGATAATGAACGACAGGAAAAACATGATGCGGCCTGAA AGGAGGAAGAGTATTGAAGGTGAACAGGCGATAGTGAGTAGCTCGCTGCGCCAGGGGATAACCCTCCCCTGGCGCAGCCAGTT 83 TTerm_0619 NC_003197.2 1951963 1951972 10 1951982 1951991 10 9 100 0 20 70 30 70 30 0 1951976 CTGCTATTAA TTAATAGCAG True CAGAAAATC TATTGTATT True False - CTGCTATTAA CCATATGAA TTAATAGCAG GATTTTCTG 40 STM1855 intergenic 1951732 1952009 - down ATGGTAGTAAATACAATACTGCTATTAACCATATGAATTAATAGCAGATTTTCTGAAACTATATATTCGTTTTTATGGCGACGCTTTTAACAAAACGTCGTCATCTTTATTTTAATATAAAAATCAAATGGATAACCTTAAAACTTAAAATAATTGTTATTACTCTAAATACCTGCACAACCAGACAGCTTTTTTTGTAACGCTGCGTGTTGTTAAGTCTATGATACCCGCGCACGGATGATGTCTCGATAAGGATTAATGGTCTGTTAACTGTCAG ATAAGTATCTTCAGAATGCCTCCTGATGGTAGTAAATACAATACTGCTATTAACCATATGAATTAATAGCAGATTTTCTGAAACTATATATTCGTTTTTATGGCGACGCTTTTAACAAAACGTCGTCATCTTTATTTTAATATAAAAATCAAATGGATAACCTTAAAACTTAAAATAATTGTTATTACTCTAAATACCTGCACAACCAGACAGCTTTTTTTGTAACGCTGCGTGTTGTTAAGTCTATGATACCCGCGCACGGATGATGTCTCGATAAGGATTAATGGTCTGTTAACTGTCAGGAGAGGTTATGCCGCCTTTAAAAAA ATGGTAGTAAATACAATACTGCTATTAACCATATGAATTAATAGCA 46 TTerm_0620 NC_003197.2 1968057 1968066 10 1968074 1968083 10 7 100 0 20 50 50 50 50 0 1968069 GACCGAATAC GTATTCGGTC True TAAAAAGAG CAGGGAAAT True False - GACCGAATAC AGGAATC GTATTCGGTC CTCTTTTTA 56 STM1871 intergenic 1967919 1968116 + down TTTTGTTGTAAAAGAAATGTTAAACTGGATTTGGATGTGATATAACCAAAAAGACCGGAATACAGAAATTCGAGGAAATTTCGAGGAATTTCGAGGGGAAACACATAACCCATTGATTTATAATCTAAATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGC TAATAAAGCTTACGTGATGCTCTGATTTTGTTGTAAAAGAAATGTTAAACTGGATTTGGATGTGATATAACCAAAAAGACCGGAATACAGAAATTCGAGGAAATTTCGAGGAATTTCGAGGGGAAACACATAACCCATTGATTTATAATCTAAATAAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTTGGCATTAATGCAGGCTA GCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACAGGAATCGTATTCGGT 59 TTerm_0621 NC_003197.2 1968057 1968066 10 1968074 1968083 10 7 100 0 20 50 50 50 50 0 1968069 GACCGAATAC GTATTCGGTC True TAAAAAGAG CAGGGAAAT True False - GACCGAATAC AGGAATC GTATTCGGTC CTCTTTTTA 56 STM1872 intergenic 1967919 1968116 - down GCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACAGGAATCGTATTCGGTCTCTTTTTATTTAGATTATAAATCAATGGGTTATGTGTTTCCCCTCGAAATTCCTCGAAATTTCCTCGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACATCCAAATCCAGTTTAACATTTCTTTTACAACAAAA TAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACAGGAATCGTATTCGGTCTCTTTTTATTTAGATTATAAATCAATGGGTTATGTGTTTCCCCTCGAAATTCCTCGAAATTTCCTCGAATTTCTGTATTCCGGTCTTTTTGGTTATATCACATCCAAATCCAGTTTAACATTTCTTTTACAACAAAATCAGAGCATCACGTAAGCTTTATTA GCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATACAGGAATCGTATTCGGT 59 TTerm_0622 NC_003197.2 1968241 1968257 17 1968264 1968280 17 6 94 0 29 67 32 68 31 0 1968260 AAAAAACCGTAAGCCTT AAGGTTTACGGTTTTTT True CAGAGATAA ATTAAAAAT True True - AAAAAACCGTAAACCTT CACGAA AAGGCTTACGGTTTTTT TTATCTCTG 74 STM1873 intergenic 1968239 1968293 - down ACTGATTTTTAATAAAAAACCGTAAACCTTCACGAAAAGGCTTACGGTTTTTTT AGCTTTGTGATCCATCCAATAGCTGACTGATTTTTAATAAAAAACCGTAAACCTTCACGAAAAGGCTTACGGTTTTTTTATCTCTGATAACAGACAAAACGCCA ACTGATTTTTAATAAAAAACCGTAAACCTTCACGAAAAGGCTTACGGTTTTT 52 TTerm_0623 NC_003197.2 1985037 1985045 9 1985053 1985061 9 7 88 0 13 27 72 25 75 0 1985048 AGCCGGCAC GTACCGGCT True AACAAAAAA CTGTCAGCG True False - AGCCGGTAC GCGATGT GTGCCGGCT TTTTTTGTT 58 STM1890 intergenic 1984970 1985077 - down ACAAATGCGCTGACAGAGCCGGTACGCGATGTGTGCCGGCTTTTTTGTTTTGTGTGAGACGCAGACGTCGCTACACTATTCACAATTCCTTTTCGCGTCAGCAGACC TTCTGCCGCAACTGCGCTTCGATTAACAAATGCGCTGACAGAGCCGGTACGCGATGTGTGCCGGCTTTTTTGTTTTGTGTGAGACGCAGACGTCGCTACACTATTCACAATTCCTTTTCGCGTCAGCAGACCCTGGAAAAGCATGGAAACCAAAAAA ACAAATGCGCTGACAGAGCCGGTACGCGATGTGTGCCGGC 40 TTerm_0624 NC_003197.2 2000949 2000957 9 2000967 2000975 9 9 100 0 18 22 77 22 77 0 2000961 AGGCCCCTG CAGGGGCCT True AGAAAAAAA GGTACGAGC True False - AGGCCCCTG CCAATTCAA CAGGGGCCT TTTTTTTCT 76 STM1906 intergenic 2000786 2001022 + down TGGATTGCCGAATGACCGTTACGTATAGCACCGTTTCTCCAAAATAGTTCAAGTTGCAGCAAGGCGGCAACGCAGCAAATCCCCGGGAACGTAGGTAGCTACGTGGCCGGGGTGCGCGAGGCGGCCAACGCTGCTGCGGCTTGAAATATGAAGGAGAAAAAAAGGCCCCTGTTGAATTGGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAAT GGTGCTGATTGCGCGTAAACCGTGATGGATTGCCGAATGACCGTTACGTATAGCACCGTTTCTCCAAAATAGTTCAAGTTGCAGCAAGGCGGCAACGCAGCAAATCCCCGGGAACGTAGGTAGCTACGTGGCCGGGGTGCGCGAGGCGGCCAACGCTGCTGCGGCTTGAAATATGAAGGAGAAAAAAAGGCCCCTGTTGAATTGGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGAACAATGA ATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAGGCCCCTGCCAATTCAACAGGGGCC 73 TTerm_0625 NC_003197.2 2000949 2000957 9 2000967 2000975 9 9 100 0 18 22 77 22 77 0 2000961 AGGCCCCTG CAGGGGCCT True AGAAAAAAA GGTACGAGC True False - AGGCCCCTG CCAATTCAA CAGGGGCCT TTTTTTTCT 76 STM1907 intergenic 2000786 2001022 - down ATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAGGCCCCTGCCAATTCAACAGGGGCCTTTTTTTCTCCTTCATATTTCAAGCCGCAGCAGCGTTGGCCGCCTCGCGCACCCCGGCCACGTAGCTACCTACGTTCCCGGGGATTTGCTGCGTTGCCGCCTTGCTGCAACTTGAACTATTTTGGAGAAACGGTGCTATACGTAACGGTCATTCGGCAATCCA TCATTGTTCGCCATCAGGCCAAATGATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAGGCCCCTGCCAATTCAACAGGGGCCTTTTTTTCTCCTTCATATTTCAAGCCGCAGCAGCGTTGGCCGCCTCGCGCACCCCGGCCACGTAGCTACCTACGTTCCCGGGGATTTGCTGCGTTGCCGCCTTGCTGCAACTTGAACTATTTTGGAGAAACGGTGCTATACGTAACGGTCATTCGGCAATCCATCACGGTTTACGCGCAATCAGCACC ATTTTTACCGTTGCATCATGTCGCCCAATATGATGCTTGCTCGTACCAGGCCCCTGCCAATTCAACAGGGGCC 73 TTerm_0626 NC_003197.2 2021082 2021092 11 2021097 2021107 11 4 100 0 22 45 54 45 54 0 2021094 AGCAGCGGTAA TTACCGCTGCT True CAAAAAAAA GGAGTGTTT True False - AGCAGCGGTAA GTCA TTACCGCTGCT TTTTTTTTG 68 STM1924 intergenic 2021020 2021133 - down ACCGAAACGGTGTGGACAAACACTCCAGCAGCGGTAAGTCATTACCGCTGCTTTTTTTTGCCTTGCCTTCGCGTTAATCGCCCGACTGCGCATCCTGTCATAGTCAACAGCGG ATGAACAGATCGAACAGGCTGTTTAACCGAAACGGTGTGGACAAACACTCCAGCAGCGGTAAGTCATTACCGCTGCTTTTTTTTGCCTTGCCTTCGCGTTAATCGCCCGACTGCGCATCCTGTCATAGTCAACAGCGGAAGGATGATGTCGTGCTTATCTTAT ACCGAAACGGTGTGGACAAACACTCCAGCAGCGGTAAGTCATTACCGCTGC 51 TTerm_0627 NC_003197.2 2032545 2032551 7 2032560 2032566 7 8 100 0 14 42 57 42 57 0 2032555 AGCGAGA TCTCGCT True CACACAAAA ATATTATAC True False - AGCGAGA AACCCATC TCTCGCT TTTTGTGTG 60 STM1939 intergenic 2032361 2032586 - down AGTTAGCATGAGTATAATATAGCGAGAAACCCATCTCTCGCTTTTGTGTGGGGCGAGCGCTTCCTGGCGGAAAATCTGCGCCCTGATCCTCCTTTTGTGCGTTAACTTCCGGAATCCTCCTCATTTCGTGTTAATCTGGCCCCTGATGGTTGCCATCCAACTGCCTGCAAAAAAATTATTTTTATCCGCTGCAATGTAAGAGGCCTACAGGCGGAAGTCATCACT TTTATCTGTCCGCGGCGGTGGTATAAGTTAGCATGAGTATAATATAGCGAGAAACCCATCTCTCGCTTTTGTGTGGGGCGAGCGCTTCCTGGCGGAAAATCTGCGCCCTGATCCTCCTTTTGTGCGTTAACTTCCGGAATCCTCCTCATTTCGTGTTAATCTGGCCCCTGATGGTTGCCATCCAACTGCCTGCAAAAAAATTATTTTTATCCGCTGCAATGTAAGAGGCCTACAGGCGGAAGTCATCACTGAGGAAAAGCGTTATGAAAATGGAA AGTTAGCATGAGTATAATATAGCGAGAAACCCATCTCTCGC 41 TTerm_0628 NC_003197.2 2035298 2035305 8 2035310 2035317 8 4 100 0 16 50 50 50 50 0 2035307 AAACCACC GGTGGTTT True GCACAAAAA CACGACACT True False - AAACCACC TACG GGTGGTTT TTTTTGTGC 64 STM1942 intergenic 2035109 2035363 - down TACCATGGGAAAGACAAGAATAATCAAAGCAATAAGCAGTGTCGTGAAACCACCTACGGGTGGTTTTTTTGTGCCTTCAATTTGTATGCCGACCGCGAGCGTGAACTTTCCAGCGCGATACACAGTAAAAAACATCGGTAGCGGCATTTCTGCCAGTACAACAGTTATGTGCTACCGACCCGCAAGAACTTATGCCTGGTAATTACTAAACGTCGGGTAAATCAGCCGATAAAATCCATTAATCTCTATAAAAA GTGCGGGTTCAAGTCCCGCTCCGGGTACCATGGGAAAGACAAGAATAATCAAAGCAATAAGCAGTGTCGTGAAACCACCTACGGGTGGTTTTTTTGTGCCTTCAATTTGTATGCCGACCGCGAGCGTGAACTTTCCAGCGCGATACACAGTAAAAAACATCGGTAGCGGCATTTCTGCCAGTACAACAGTTATGTGCTACCGACCCGCAAGAACTTATGCCTGGTAATTACTAAACGTCGGGTAAATCAGCCGATAAAATCCATTAATCTCTATAAAAAATGCTGATATGTTTTATGCCTGCTT TACCATGGGAAAGACAAGAATAATCAAAGCAATAAGCAGTGTCGTGAAACCACCTACGGGTGGTT 65 TTerm_0629 NC_003197.2 2043099 2043104 6 2043113 2043118 6 8 100 0 12 16 83 16 83 0 2043108 AGGCGC GCGCCT True AATAAAAAA CCGTTTGCT True False - AGGCGC GTGAATCG GCGCCT TTTTTTATT 64 STM1954 intergenic 2043044 2043187 - down ATGTTCTACGTTGCCCGGCAGGCAGTGCGCCACCGGGCAATATCAACCTCATACTATGTCAGCAAACGGAGGCGCGTGAATCGGCGCCTTTTTTATTTCCGTTAGATCAACGTGCATAATAAAAAGAACACACCACAACGTTA GGTTTGGCGCTGACGTGACCCAATAATGTTCTACGTTGCCCGGCAGGCAGTGCGCCACCGGGCAATATCAACCTCATACTATGTCAGCAAACGGAGGCGCGTGAATCGGCGCCTTTTTTATTTCCGTTAGATCAACGTGCATAATAAAAAGAACACACCACAACGTTACCGGAGGCTCAATGCCACTACATCA ATGTTCTACGTTGCCCGGCAGGCAGTGCGCCACCGGGCAATATCAACCTCATACTATGTCAGCAAACGGAGGCGCGTGAATCGGCGCC 88 TTerm_0630 NC_003197.2 2047599 2047606 8 2047611 2047618 8 4 100 0 16 37 62 37 62 0 2047608 AAGGCAGC GCTGCCTT True AATTAAAAA GATTGTGTA True False - AAGGCAGC GAAA GCTGCCTT TTTTTAATT 72 STM1959 intergenic 2047583 2047655 - down ATCCGGCGATTGATTCACCGACACGTGGTACACAATCAAGGCAGCGAAAGCTGCCTTTTTTAATTCCGGAGC AAAACGTCCTCTCTTTACTGCGTTAATCCGGCGATTGATTCACCGACACGTGGTACACAATCAAGGCAGCGAAAGCTGCCTTTTTTAATTCCGGAGCCTGTGTAATGAAAGAAATCACCGTC ATCCGGCGATTGATTCACCGACACGTGGTACACAATCAAGGCAGCGAAAGCTGCCT 56 TTerm_0631 NC_003197.2 2051617 2051637 21 2051644 2051664 21 6 85 0 27 45 54 44 55 0 2051640 TCTTCCATACTCCAGAGGTCG CGACTTCTGGAGCACGGAAGA True ATGAAAATT TGAAAAACC True False - TCTTCCGTGCTCCAGAAGTCG TTTAGC CGACCTCTGGAGTATGGAAGA AATTTTCAT 78 STM1962 intergenic 2051592 2051650 + down TATTTTCCCGTCTCGTATGAAAATTCTTCCATACTCCAGAGGTCGGCTAAACGACTTC GCCAGATGCGCCTGGCGCCTCATAATATTTTCCCGTCTCGTATGAAAATTCTTCCATACTCCAGAGGTCGGCTAAACGACTTCTGGAGCACGGAAGATGAAAAACCCC GAAGTCGTTTAGCCGACCTCTGGAGTATGGAAG 33 TTerm_0632 NC_003197.2 2071587 2071598 12 2071605 2071616 12 6 100 0 24 33 66 33 66 0 2071601 CAAAACGCCCGG CCGGGCGTTTTG True CTCCACAGC TCATCGGGC True True - CAAAACGCCCGG TTAATG CCGGGCGTTTTG GCTGTGGAG 96 STM1988 intergenic 2071466 2071617 - down ACAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATGCCAGGATTGAGTGGTATCCCTTGATGAGGTCTGGCTACCGTAAGCCATCAGGGGGAGTTGTATCAATAAC GGCGCGTGCGGGACGAAGCCCGATGACAAAACGCCCGGTTAATGCCGGGCGTTTTGCTGTGGAGAAAAAGAGTCGTCGCGCTGCGACATGCTGCTACCTGGTTATGCCAGGATTGAGTGGTATCCCTTGATGAGGTCTGGCTACCGTAAGCCATCAGGGGGAGTTGTATCAATAACCAGGAGTTACCAGGGTGCCGCACGA ACAAAACGCCCGGTTAATGCCGGGCGTTTT 30 TTerm_0633 NC_003197.2 2078998 2079003 6 2079009 2079014 6 5 100 0 12 33 66 33 66 0 2079005 AGCTCC GGAGCT True CATAAAAAA AATATGAAT True False - AGCTCC GTACA GGAGCT TTTTTTATG 56 STM1995 intergenic 2078762 2079222 + down GACGCTTTATGTTATTCAAGCCCGTGCTTAGCGCGGGCTTGTTATTATAGGGTAAGAATTAAATAACGGATAACGGCGCAAAGACAGGTTGACCTGGTTTCATCGGATAGATGAAGACAACATCGCTTTTTTCAGGCGCTGTCTGCAAGAGAAATAACACTTTTGGGGAAAGGAAAATGCCACTATAGATGATGGATGTCAGCGTCTATAGATGATAATCATCCGGGCATAAAAAAGCTCCTGTACGGAGCTAATATGAATTATTTTCTAAAATCTGGCGGAACCTGCCCTGAGCGAATGTATAATCCAACATTATCAAAAGTGATCATGGTTGACTTACAAAAAATACATTTCGCGCCAAACGGGTTTTGCTCAGTAACATCGAATGTCGATGTTCTGTATTGTGAACCATGGCAACATGGACACCGGAAGTGAATTTTATTAGTAATATCAGTTGCCT TGTTGGTCTGGTCTACCAGTTCTAAGACGCTTTATGTTATTCAAGCCCGTGCTTAGCGCGGGCTTGTTATTATAGGGTAAGAATTAAATAACGGATAACGGCGCAAAGACAGGTTGACCTGGTTTCATCGGATAGATGAAGACAACATCGCTTTTTTCAGGCGCTGTCTGCAAGAGAAATAACACTTTTGGGGAAAGGAAAATGCCACTATAGATGATGGATGTCAGCGTCTATAGATGATAATCATCCGGGCATAAAAAAGCTCCTGTACGGAGCTAATATGAATTATTTTCTAAAATCTGGCGGAACCTGCCCTGAGCGAATGTATAATCCAACATTATCAAAAGTGATCATGGTTGACTTACAAAAAATACATTTCGCGCCAAACGGGTTTTGCTCAGTAACATCGAATGTCGATGTTCTGTATTGTGAACCATGGCAACATGGACACCGGAAGTGAATTTTATTAGTAATATCAGTTGCCTTAAAGCGCCACAACGTTGACCGCTG AGGCAACTGATATTACTAATAAAATTCACTTCCGGTGTCCATGTTGCCATGGTTCACAATACAGAACATCGACATTCGATGTTACTGAGCAAAACCCGTTTGGCGCGAAATGTATTTTTTGTAAGTCAACCATGATCACTTTTGATAATGTTGGATTATACATTCGCTCAGGGCAGGTTCCGCCAGATTTTAGAAAATAATTCATATTAGCTCCGTACAGGAGC 224 TTerm_0634 NC_003197.2 2078998 2079003 6 2079009 2079014 6 5 100 0 12 33 66 33 66 0 2079005 AGCTCC GGAGCT True CATAAAAAA AATATGAAT True False - AGCTCC GTACA GGAGCT TTTTTTATG 56 STM1996 intergenic 2078762 2079222 - down AGGCAACTGATATTACTAATAAAATTCACTTCCGGTGTCCATGTTGCCATGGTTCACAATACAGAACATCGACATTCGATGTTACTGAGCAAAACCCGTTTGGCGCGAAATGTATTTTTTGTAAGTCAACCATGATCACTTTTGATAATGTTGGATTATACATTCGCTCAGGGCAGGTTCCGCCAGATTTTAGAAAATAATTCATATTAGCTCCGTACAGGAGCTTTTTTATGCCCGGATGATTATCATCTATAGACGCTGACATCCATCATCTATAGTGGCATTTTCCTTTCCCCAAAAGTGTTATTTCTCTTGCAGACAGCGCCTGAAAAAAGCGATGTTGTCTTCATCTATCCGATGAAACCAGGTCAACCTGTCTTTGCGCCGTTATCCGTTATTTAATTCTTACCCTATAATAACAAGCCCGCGCTAAGCACGGGCTTGAATAACATAAAGCGTC CAGCGGTCAACGTTGTGGCGCTTTAAGGCAACTGATATTACTAATAAAATTCACTTCCGGTGTCCATGTTGCCATGGTTCACAATACAGAACATCGACATTCGATGTTACTGAGCAAAACCCGTTTGGCGCGAAATGTATTTTTTGTAAGTCAACCATGATCACTTTTGATAATGTTGGATTATACATTCGCTCAGGGCAGGTTCCGCCAGATTTTAGAAAATAATTCATATTAGCTCCGTACAGGAGCTTTTTTATGCCCGGATGATTATCATCTATAGACGCTGACATCCATCATCTATAGTGGCATTTTCCTTTCCCCAAAAGTGTTATTTCTCTTGCAGACAGCGCCTGAAAAAAGCGATGTTGTCTTCATCTATCCGATGAAACCAGGTCAACCTGTCTTTGCGCCGTTATCCGTTATTTAATTCTTACCCTATAATAACAAGCCCGCGCTAAGCACGGGCTTGAATAACATAAAGCGTCTTAGAACTGGTAGACCAGACCAACA AGGCAACTGATATTACTAATAAAATTCACTTCCGGTGTCCATGTTGCCATGGTTCACAATACAGAACATCGACATTCGATGTTACTGAGCAAAACCCGTTTGGCGCGAAATGTATTTTTTGTAAGTCAACCATGATCACTTTTGATAATGTTGGATTATACATTCGCTCAGGGCAGGTTCCGCCAGATTTTAGAAAATAATTCATATTAGCTCCGTACAGGAGC 224 TTerm_0635 NC_003197.2 2114375 2114380 6 2114387 2114392 6 6 100 0 12 66 33 66 33 0 2114383 GCAATA TATTGC True AAAAATCGG TATTCATAA True False - GCAATA TTTTGC TATTGC CCGATTTTT 40 STM2036 intergenic 2113805 2114396 - down AATAGCAATATTTTGCTATTGCCGATTTTTGATAGTCTTTTGTATCTTAATCATTTCAGAAAGAAAATTTATCTGGTGTAACAATAAATTGTCATAGCGCAACAAAATAATAAAATTTAGGGCATAAACTGCACCAGTTTTTATTTTTGTGATGAAGTACAGTGTCAGGAAAGATAAGTTTTATTACGCTTTGTCGATACGTTTTATCGTCAATATACCGGTAAGGATGAGTAGATTAACGTCAGATGAGCAACCGCTCAGGCTATTGCTCACAGAAATGTAAAACGTAGCACATTATTAATTGTCGTTATGGGTGTGCCGTACAGCCATAACGTAAACCAACAGGTTTGCCACATTTGTGGTAGGGAAGGGGGTGAAAATCCCCCGCAGCCCCCGCTGCTGTGATGCTGACGACCCCGTAAAGACCACTGATCGCAAGATTGGGAAGGACGGGCGAGGAGGACGCTAAGCCAGAAGACCTGCCTGTCGGTGATAACCAACAACTTCGGTGGGAAGTGGGTTGCGAAGACGCGTACAGTCGAAAGACTGAACATGCGCGTACCTGTATACCCCTACCACCCTGAACAGGAT AATAGCAATATTTTGCTATTG 21 TTerm_0636 NC_003197.2 2115410 2115424 15 2115429 2115444 16 4 93 6 20 58 41 60 40 0 2115426 ATCAAAAGTCTCCCA TGGGAGACGTTTTGAT True ATGACAATA CAGTTCGTG True True - ATCAAAACGTCTCCCA GCAA TGGGAGACTTTTGAT TATTGTCAT 72 STM2037 intergenic 2115320 2115524 - down AGGAAATGCGAACCAGATTCACAGCAATGATGTATCGTAAAAACAGGTGAGATAATTTCGTGATCTGCTTTCACGAACTGATCAAAACGTCTCCCAGCAATGGGAGACTTTTGATATTGTCATTGTACTTTTTATCAGGGCCAGGATAATGGTAATAAAAAGTGAATGTAAATAATGTGTTTTGTTTATAACAATAAATTAACT TACCTTGTAACCGCTGTGAACTGTAAGGAAATGCGAACCAGATTCACAGCAATGATGTATCGTAAAAACAGGTGAGATAATTTCGTGATCTGCTTTCACGAACTGATCAAAACGTCTCCCAGCAATGGGAGACTTTTGATATTGTCATTGTACTTTTTATCAGGGCCAGGATAATGGTAATAAAAAGTGAATGTAAATAATGTGTTTTGTTTATAACAATAAATTAACTGAGGGGTTTTATCATGATTTCTGCG AGGAAATGCGAACCAGATTCACAGCAATGATGTATCGTAAAAACAGGTGAGATAATTTCGTGATCTGCTTTCACGAACTGATCAAAACGTCTCCCAGCAATGGGAGACTTTTGA 114 TTerm_0637 NC_003197.2 2159318 2159326 9 2159332 2159340 9 5 100 0 18 33 66 33 66 0 2159328 AAGCCCGGT ACCGGGCTT True ATAAAAAAA AAACATTTT True True - AAGCCCGGT TTAAT ACCGGGCTT TTTTTTTAT 76 STM2081 intergenic 2159121 2159358 - down ATTTCTGCAAAAATGTTTAAGCCCGGTTTAATACCGGGCTTTTTTTTATCTCTATTCTTATTGATTTATCGCTTTTGCTTAATATTAACTTAATAATCTGTGTTTATCGTAATGAAGATAATCTGAATTGTTTTCGTCTGCGTTGCACTTTATATACTCAGGCGTTAAAACTTTAATATCTTATCAGGATGCGAAATACATCATGATTCATAATTAAGTTAATTCTGAGAGCGAATA TTTTCCATACCGAATGGTTGGAATAATTTCTGCAAAAATGTTTAAGCCCGGTTTAATACCGGGCTTTTTTTTATCTCTATTCTTATTGATTTATCGCTTTTGCTTAATATTAACTTAATAATCTGTGTTTATCGTAATGAAGATAATCTGAATTGTTTTCGTCTGCGTTGCACTTTATATACTCAGGCGTTAAAACTTTAATATCTTATCAGGATGCGAAATACATCATGATTCATAATTAAGTTAATTCTGAGAGCGAATAATGAAAATCACGATATCCGGGACGG ATTTCTGCAAAAATGTTTAAGCCCGGTTTAATACCGGGCT 40 TTerm_0638 NC_003197.2 2176566 2176573 8 2176578 2176585 8 4 100 0 16 50 50 50 50 0 2176575 AAATGCCC GGGCATTT True TTCATAGAA AAATTTATT True False - AAATGCCC ATCA GGGCATTT TTCTATGAA 64 STM2096 intergenic 2176551 2176593 - down ATAAATTTAAATGCCCATCAGGGCATTTTCTATGAATGAGAA AAATGTTTACGACGACAACCATCTAATAAATTTAAATGCCCATCAGGGCATTTTCTATGAATGAGAAATGGAAATGAAAACGCGTAAGGGCA ATAAATTTAAATGCCCATCAGGGCATT 27 TTerm_0639 NC_003197.2 2242574 2242580 7 2242586 2242592 7 5 100 0 14 14 85 14 85 0 2242582 CCCCCTC GAGGGGG True AAAAAAAGC AAATACAGC True False - CCCCCTC TGGAT GAGGGGG GCTTTTTTT 68 STM2148 intergenic 2242567 2242830 + down AAAAAGCCCCCTCATCCAGAGGGGGAAATACAGCCCCATGTTACTTTTTTATTAGCCCTTAATCACTCTATCCCCTTCAAACTGCCTTTTTTGTTGACTGCCTTCACTACCCGATTCGCTCTGGATCTCGCCCTTTTGAAACTACCGCATACCACATTAAAATTTATTGCAGAAAGATTGTCATCCCGGTCACTTATTATTGTAAGTGACCGGAAGTTCATTCACCTATCGCGCCATATATCTTAAATGTTTTTCATATATAT TGGCGAGATTTTTTATCATCGATAAAAAAAGCCCCCTCATCCAGAGGGGGAAATACAGCCCCATGTTACTTTTTTATTAGCCCTTAATCACTCTATCCCCTTCAAACTGCCTTTTTTGTTGACTGCCTTCACTACCCGATTCGCTCTGGATCTCGCCCTTTTGAAACTACCGCATACCACATTAAAATTTATTGCAGAAAGATTGTCATCCCGGTCACTTATTATTGTAAGTGACCGGAAGTTCATTCACCTATCGCGCCATATATCTTAAATGTTTTTCATATATATTAATCGTATTTCACATAGATCAGCG ATATATATGAAAAACATTTAAGATATATGGCGCGATAGGTGAATGAACTTCCGGTCACTTACAATAATAAGTGACCGGGATGACAATCTTTCTGCAATAAATTTTAATGTGGTATGCGGTAGTTTCAAAAGGGCGAGATCCAGAGCGAATCGGGTAGTGAAGGCAGTCAACAAAAAAGGCAGTTTGAAGGGGATAGAGTGATTAAGGGCTAATAAAAAAGTAACATGGGGCTGTATTTCCCCCTCTGGATGAGGGG 256 TTerm_0640 NC_003197.2 2242574 2242580 7 2242586 2242592 7 5 100 0 14 14 85 14 85 0 2242582 CCCCCTC GAGGGGG True AAAAAAAGC AAATACAGC True False - CCCCCTC TGGAT GAGGGGG GCTTTTTTT 68 STM2149 intergenic 2242567 2242830 - down ATATATATGAAAAACATTTAAGATATATGGCGCGATAGGTGAATGAACTTCCGGTCACTTACAATAATAAGTGACCGGGATGACAATCTTTCTGCAATAAATTTTAATGTGGTATGCGGTAGTTTCAAAAGGGCGAGATCCAGAGCGAATCGGGTAGTGAAGGCAGTCAACAAAAAAGGCAGTTTGAAGGGGATAGAGTGATTAAGGGCTAATAAAAAAGTAACATGGGGCTGTATTTCCCCCTCTGGATGAGGGGGCTTTTT CGCTGATCTATGTGAAATACGATTAATATATATGAAAAACATTTAAGATATATGGCGCGATAGGTGAATGAACTTCCGGTCACTTACAATAATAAGTGACCGGGATGACAATCTTTCTGCAATAAATTTTAATGTGGTATGCGGTAGTTTCAAAAGGGCGAGATCCAGAGCGAATCGGGTAGTGAAGGCAGTCAACAAAAAAGGCAGTTTGAAGGGGATAGAGTGATTAAGGGCTAATAAAAAAGTAACATGGGGCTGTATTTCCCCCTCTGGATGAGGGGGCTTTTTTTATCGATGATAAAAAATCTCGCCA ATATATATGAAAAACATTTAAGATATATGGCGCGATAGGTGAATGAACTTCCGGTCACTTACAATAATAAGTGACCGGGATGACAATCTTTCTGCAATAAATTTTAATGTGGTATGCGGTAGTTTCAAAAGGGCGAGATCCAGAGCGAATCGGGTAGTGAAGGCAGTCAACAAAAAAGGCAGTTTGAAGGGGATAGAGTGATTAAGGGCTAATAAAAAAGTAACATGGGGCTGTATTTCCCCCTCTGGATGAGGGG 256 TTerm_0641 NC_003197.2 2279033 2279043 11 2279048 2279058 11 4 81 0 12 63 36 66 33 0 2279045 AAAATTTGCGA TCGCGCATTTT True ACCGGGTTA TCATTGAAG True True - AAAATGCGCGA CGTA TCGCAAATTTT TAACCCGGT 64 STM2182 intergenic 2279010 2279153 + down CGACGGGACAAAAGACCGGGTTAAAATTTGCGATACGTCGCGCATTTTTCATTGAAGTTTCACAAGTTGCATAAGCAATGAGATTTAGATCACATATTAAGACATAGCAGGCCCGTAAACTACGGTTCCATTACATTGTTATG GCTCATTCTGGCGGTAATGCGCTAACGACGGGACAAAAGACCGGGTTAAAATTTGCGATACGTCGCGCATTTTTCATTGAAGTTTCACAAGTTGCATAAGCAATGAGATTTAGATCACATATTAAGACATAGCAGGCCCGTAAACTACGGTTCCATTACATTGTTATGAGGCAACGCCATGCATCCACGTTTT CATAACAATGTAATGGAACCGTAGTTTACGGGCCTGCTATGTCTTAATATGTGATCTAAATCTCATTGCTTATGCAACTTGTGAAACTTCAATGAAAAATGCGCGACGTATCGCAAATTT 120 TTerm_0642 NC_003197.2 2298791 2298799 9 2298804 2298812 9 4 100 0 18 44 55 44 55 0 2298801 AACCCTCTC GAGAGGGTT True AAACAAAAA AGAAGAGTC True False - AACCCTCTC ATTC GAGAGGGTT TTTTTGTTT 68 STM2200 intergenic 2298554 2298887 - down ACGCGGTATTCTCGTCATAGGCCGGATAGGCTTTATGCCGCTATCCGGCACTGACTGCCTGAACCTGACTCTTCTAACCCTCTCATTCGAGAGGGTTTTTTGTTTTTTCTTCATGATTGGTTCAAATGACATAATTATTAACAATTAAATTGATAATTATTATCGTTTGCTTTATCGTTACGCTCGAAATCAGAAAGGATGAAGATTCGGGCGCGACCGTCACTCATGAGCCCGACTCGCCTGCATAAAAAGAGTTCGCCGTGATAACCGTTATCGCAGGCGAAACGTAATGCGTTGTGAGCGATAACCGATTTTTTTTGTCGTATTTACCTC ACTTCCCGGAACGCGTTAAAAAGTAACGCGGTATTCTCGTCATAGGCCGGATAGGCTTTATGCCGCTATCCGGCACTGACTGCCTGAACCTGACTCTTCTAACCCTCTCATTCGAGAGGGTTTTTTGTTTTTTCTTCATGATTGGTTCAAATGACATAATTATTAACAATTAAATTGATAATTATTATCGTTTGCTTTATCGTTACGCTCGAAATCAGAAAGGATGAAGATTCGGGCGCGACCGTCACTCATGAGCCCGACTCGCCTGCATAAAAAGAGTTCGCCGTGATAACCGTTATCGCAGGCGAAACGTAATGCGTTGTGAGCGATAACCGATTTTTTTTGTCGTATTTACCTCATGGAGAAATGGAATGTTTAGGTTT ACGCGGTATTCTCGTCATAGGCCGGATAGGCTTTATGCCGCTATCCGGCACTGACTGCCTGAACCTGACTCTTCTAACCCTCTCATTCGAGAGGGT 96 TTerm_0643 NC_003197.2 2365404 2365411 8 2365416 2365423 8 4 100 0 16 37 62 37 62 0 2365413 AAAGGGCC GGCCCTTT True GCATGAAAA AGCAACATC True False - AAAGGGCC TGCG GGCCCTTT TTTTCATGC 72 STM2267 intergenic 2365341 2365442 - down ATCAGCAAAAGATGTTGCTAAAGGGCCTGCGGGCCCTTTTTTCATGCCTTATTCCGGCGTACAAATACGACGTTTTGATATACGCTTGCGTCCATTCGAAT CGCTGGGTCTGGTTTACCAGTTCTAATCAGCAAAAGATGTTGCTAAAGGGCCTGCGGGCCCTTTTTTCATGCCTTATTCCGGCGTACAAATACGACGTTTTGATATACGCTTGCGTCCATTCGAATGAGGATAAACAGCGATGAAAATGAC ATCAGCAAAAGATGTTGCTAAAGGGCCTGCGGGCCCTT 38 TTerm_0644 NC_003197.2 2394614 2394621 8 2394628 2394635 8 6 100 0 16 62 37 62 37 0 2394624 AAATCAGG CCTGATTT True TAATAAGAA AATATATCC True False - AAATCAGG CATAGA CCTGATTT TTCTTATTA 56 STM2286 intergenic 2394299 2394786 + down GTAAAAAGCGCCGGAGCCCCTCCGGCGCCATTACCCTACTCACCAGGGACGATTTTCCATCAGACATATACCCTTCATACTTCAAGTTGCTTATGTGTTGGCTACGGATTATTTTGGGTATAAACGCGGATGTCTCTTTGCAATAACCTGCCCTATTTGGTTAACCATGACCGCTAACCCACGGTGGCATGACAGATAACGACGTTACTGTTTATAGAGCAATATCTCTTGTATCGACGCGTTACCAGCCACCTTTAAAGAGGGGGATAACTGAATATCCCCAATAATAATTGAGTGTTATGTGAATAATAAGAAAATCAGGTCTATGCCTGATTTAATATATCCCCCGCTAATAATAATATTTTTACAAATAATTATACATTACATCATATTCGCTACTTTCACTTACCAGGAAACAGAGCAAAATGAATATATGTGTAAATTCACTTTACCGATTGAGCATACCGCAATTTCACAGCTTATATAC GCTACTGGCCCAGGCGCTCGGCTAAGTAAAAAGCGCCGGAGCCCCTCCGGCGCCATTACCCTACTCACCAGGGACGATTTTCCATCAGACATATACCCTTCATACTTCAAGTTGCTTATGTGTTGGCTACGGATTATTTTGGGTATAAACGCGGATGTCTCTTTGCAATAACCTGCCCTATTTGGTTAACCATGACCGCTAACCCACGGTGGCATGACAGATAACGACGTTACTGTTTATAGAGCAATATCTCTTGTATCGACGCGTTACCAGCCACCTTTAAAGAGGGGGATAACTGAATATCCCCAATAATAATTGAGTGTTATGTGAATAATAAGAAAATCAGGTCTATGCCTGATTTAATATATCCCCCGCTAATAATAATATTTTTACAAATAATTATACATTACATCATATTCGCTACTTTCACTTACCAGGAAACAGAGCAAAATGAATATATGTGTAAATTCACTTTACCGATTGAGCATACCGCAATTTCACAGCTTATATACAGAAGAGGTGAGCGATGAGGCGCTT GTATATAAGCTGTGAAATTGCGGTATGCTCAATCGGTAAAGTGAATTTACACATATATTCATTTTGCTCTGTTTCCTGGTAAGTGAAAGTAGCGAATATGATGTAATGTATAATTATTTGTAAAAATATTATTATTAGCGGGGGATATATTAAATCAGGCATAGACCTGATT 172 TTerm_0645 NC_003197.2 2394722 2394733 12 2394738 2394749 12 4 83 0 14 87 12 90 10 0 2394735 AAAATGAATATA TAAATTCACTTT True AACAGAGCA ACCGATTGA True False - AAAGTGAATTTA CACA TATATTCATTTT TGCTCTGTT 28 STM2286 intergenic 2394299 2394786 + down GTAAAAAGCGCCGGAGCCCCTCCGGCGCCATTACCCTACTCACCAGGGACGATTTTCCATCAGACATATACCCTTCATACTTCAAGTTGCTTATGTGTTGGCTACGGATTATTTTGGGTATAAACGCGGATGTCTCTTTGCAATAACCTGCCCTATTTGGTTAACCATGACCGCTAACCCACGGTGGCATGACAGATAACGACGTTACTGTTTATAGAGCAATATCTCTTGTATCGACGCGTTACCAGCCACCTTTAAAGAGGGGGATAACTGAATATCCCCAATAATAATTGAGTGTTATGTGAATAATAAGAAAATCAGGTCTATGCCTGATTTAATATATCCCCCGCTAATAATAATATTTTTACAAATAATTATACATTACATCATATTCGCTACTTTCACTTACCAGGAAACAGAGCAAAATGAATATATGTGTAAATTCACTTTACCGATTGAGCATACCGCAATTTCACAGCTTATATAC GCTACTGGCCCAGGCGCTCGGCTAAGTAAAAAGCGCCGGAGCCCCTCCGGCGCCATTACCCTACTCACCAGGGACGATTTTCCATCAGACATATACCCTTCATACTTCAAGTTGCTTATGTGTTGGCTACGGATTATTTTGGGTATAAACGCGGATGTCTCTTTGCAATAACCTGCCCTATTTGGTTAACCATGACCGCTAACCCACGGTGGCATGACAGATAACGACGTTACTGTTTATAGAGCAATATCTCTTGTATCGACGCGTTACCAGCCACCTTTAAAGAGGGGGATAACTGAATATCCCCAATAATAATTGAGTGTTATGTGAATAATAAGAAAATCAGGTCTATGCCTGATTTAATATATCCCCCGCTAATAATAATATTTTTACAAATAATTATACATTACATCATATTCGCTACTTTCACTTACCAGGAAACAGAGCAAAATGAATATATGTGTAAATTCACTTTACCGATTGAGCATACCGCAATTTCACAGCTTATATACAGAAGAGGTGAGCGATGAGGCGCTT GTATATAAGCTGTGAAATTGCGGTATGCTCAATCGGTAAAGTGAATTTACACATATATTCATTT 64 TTerm_0646 NC_003197.2 2447094 2447105 12 2447110 2447121 12 4 100 0 24 66 33 66 33 0 2447107 AAAAGAAGGCAT ATGCCTTCTTTT True CGATGAAAA ATATGCGTA True True - AAAAGAAGGCAT ACCA ATGCCTTCTTTT TTTTCATCG 72 STM2336 intergenic 2447072 2447143 - down ATTGACCCCGGATTACGCATATAAAAGAAGGCATACCAATGCCTTCTTTTTTTCATCGCCATAGCGTGATA ATAAAACTTTCCTGGATGATTTGTAATTGACCCCGGATTACGCATATAAAAGAAGGCATACCAATGCCTTCTTTTTTTCATCGCCATAGCGTGATACAGGAGTTCAAAATGGAAATGACCA ATTGACCCCGGATTACGCATATAAAAGAAGGCATACCAATGCCTTCTTT 49 TTerm_0647 NC_003197.2 2465449 2465457 9 2465464 2465472 9 6 100 0 18 55 44 55 44 0 2465460 GGTGCAAAA TTTTGCACC True ACCAAAAAG GTGATAGTT True False - GGTGCAAAA TAGATG TTTTGCACC CTTTTTGGT 52 STM2355 intergenic 2465282 2465510 - down AGGGAAGGGGATAACGCGCCGCGCTGGGGAACTATCACGGTGCAAAATAGATGTTTTGCACCTTTTTGGTGCATAAGCCGTTGCGGAACAGGCGCATAAATGCATACTTAATCGATTTTTATGCAAAATAAACCGGCTGACAAGGTAGAATGCTTTGCCTTGTCGGCCTGATTAATGGCACGATAGTCGCATCGGATCTGTAAAGATCTCCTGGAAAGACAGTCTGTT TCGATTTTAATGTTTACGGCGATTGAGGGAAGGGGATAACGCGCCGCGCTGGGGAACTATCACGGTGCAAAATAGATGTTTTGCACCTTTTTGGTGCATAAGCCGTTGCGGAACAGGCGCATAAATGCATACTTAATCGATTTTTATGCAAAATAAACCGGCTGACAAGGTAGAATGCTTTGCCTTGTCGGCCTGATTAATGGCACGATAGTCGCATCGGATCTGTAAAGATCTCCTGGAAAGACAGTCTGTTGAGGATAGTTATGAAAAAACTGGCG AGGGAAGGGGATAACGCGCCGCGCTGGGGAACTATCACGGTGCAAAATAGATGTTTTGCAC 61 TTerm_0648 NC_003197.2 2476480 2476490 11 2476497 2476507 11 6 90 0 17 50 50 50 50 0 2476493 ATGGCGCTGAA TTCAACGCCAT True AAATAAAAA CACACTTTT True True - ATGGCGTTGAA TATTTT TTCAGCGCCAT TTTTTATTT 50 STM2364 intergenic 2476455 2476689 - down AGGCGCGTTTTGCCTGAGCGCGCAGCGTTAAGGCCTACGGTGTTCATCTGGTAATAGCCGAAGTTCTGTAGGCTGGATAAGGCGTTTACGCCGCCATCCGGCAGAAGGAATGAACCGGGTATCCTGCGCTTATCAGGCCGATGGCAGCTCTTCTGGTCGTGCCCGAAGAGATAAAAAGTGTGATGGCGTTGAATATTTTTTCAGCGCCATTTTTATTTACGCGTGGGAAGGAAA TGGTGATGGGATATAGCCCGAACTAAGGCGCGTTTTGCCTGAGCGCGCAGCGTTAAGGCCTACGGTGTTCATCTGGTAATAGCCGAAGTTCTGTAGGCTGGATAAGGCGTTTACGCCGCCATCCGGCAGAAGGAATGAACCGGGTATCCTGCGCTTATCAGGCCGATGGCAGCTCTTCTGGTCGTGCCCGAAGAGATAAAAAGTGTGATGGCGTTGAATATTTTTTCAGCGCCATTTTTATTTACGCGTGGGAAGGAAATCCCTACGCAAACGTTTTCTTTTTC AGGCGCGTTTTGCCTGAGCGCGCAGCGTTAAGGCCTACGGTGTTCATCTGGTAATAGCCGAAGTTCTGTAGGCTGGATAAGGCGTTTACGCCGCCATCCGGCAGAAGGAATGAACCGGGTATCCTGCGCTTATCAGGCCGATGGCAGCTCTTCTGGTCGTGCCCGAAGAGATAAAAAGTGTGATGGCGTTGAATATTTTTTCAGCGCCA 209 TTerm_0649 NC_003197.2 2488564 2488574 11 2488579 2488589 11 4 100 0 22 45 54 45 54 0 2488576 AAACAGGTCGC GCGACCTGTTT True GAATGAAAA CATTGTTGA True False - AAACAGGTCGC TAAT GCGACCTGTTT TTTTCATTC 84 STM2378 intergenic 2488528 2488621 - down AGCCTGACTATTACGTTGTAGTATCAACAATGAAACAGGTCGCTAATGCGACCTGTTTTTTCATTCAGGGAACAACAAATTATATGGATATTA CCACGCTGGTGATGCGTAAGTTGTAAGCCTGACTATTACGTTGTAGTATCAACAATGAAACAGGTCGCTAATGCGACCTGTTTTTTCATTCAGGGAACAACAAATTATATGGATATTATATAAATGCCAACTAATACATTAGA AGCCTGACTATTACGTTGTAGTATCAACAATGAAACAGGTCGCTAATGCGACCTGTT 57 TTerm_0650 NC_003197.2 2501696 2501707 12 2501713 2501724 12 5 91 0 19 29 70 27 72 0 2501709 ACGCCTCCGCCA TGACGGAGGCGT True AAAAGAAAA CGTGAATGA True False - ACGCCTCCGTCA TCATC TGGCGGAGGCGT TTTTCTTTT 70 STM2390 intergenic 2501573 2501739 - down ATCCGTTCATTCACGACGCCTCCGTCATCATCTGGCGGAGGCGTTTTCTTTTTTTGTCGCTTCCCTTCACTGTGCCTTAGCTCCCACTTTCTTTTCTCTCTGCTTGGCTAAATGTAAAAAATTGGTTAAGACTGTGATCAGGTCAGACCACTAATTTATTTTTTTA TGATCTTCCAGCTCGGCCTGCGTTAATCCGTTCATTCACGACGCCTCCGTCATCATCTGGCGGAGGCGTTTTCTTTTTTTGTCGCTTCCCTTCACTGTGCCTTAGCTCCCACTTTCTTTTCTCTCTGCTTGGCTAAATGTAAAAAATTGGTTAAGACTGTGATCAGGTCAGACCACTAATTTATTTTTTTACAGGGGAGTACTATGCGTCAGGCTT ATCCGTTCATTCACGACGCCTCCGTCATCATCTGGCGGAGGCG 43 TTerm_0651 NC_003197.2 2503721 2503732 12 2503738 2503749 12 5 100 0 24 58 41 58 41 0 2503734 AAAAAGGTGAGC GCTCACCTTTTT True AACGGATCA ATTTACTGC True True - AAAAAGGTGAGC GCAAT GCTCACCTTTTT TGATCCGTT 80 STM2391 intergenic 2503701 2503762 + down TCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTTATTTACTGCCGTT TACTAACTTTAACTACGCGTTCTAATCTCTTTCTGAAACGGATCAAAAAGGTGAGCATTGCGCTCACCTTTTTATTTACTGCCGTTTATTCCGAGTCGATCTCTTTGAGTT AACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTT 41 TTerm_0652 NC_003197.2 2503721 2503732 12 2503738 2503749 12 5 100 0 24 58 41 58 41 0 2503734 AAAAAGGTGAGC GCTCACCTTTTT True AACGGATCA ATTTACTGC True True - AAAAAGGTGAGC GCAAT GCTCACCTTTTT TGATCCGTT 80 STM2392 intergenic 2503701 2503762 - down AACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTTTGATCCGTTTCAGAAAGAGA AACTCAAAGAGATCGACTCGGAATAAACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTTTGATCCGTTTCAGAAAGAGATTAGAACGCGTAGTTAAAGTTAGTA AACGGCAGTAAATAAAAAGGTGAGCGCAATGCTCACCTTTT 41 TTerm_0653 NC_003197.2 2515481 2515488 8 2515493 2515500 8 4 100 0 16 50 50 50 50 0 2515490 AAAAGGCC GGCCTTTT True ACATCTGAA ATTTTGGCA True True - AAAAGGCC TTGC GGCCTTTT TTCAGATGT 64 STM2401 intergenic 2515480 2516004 + down AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTC GGGGGAAGCGTCACTCTACATCTGAAAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTCTACTCCGTGCTCGCTTCAACGGGTT GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTT 523 TTerm_0654 NC_003197.2 2515481 2515488 8 2515493 2515500 8 4 100 0 16 50 50 50 50 0 2515490 AAAAGGCC GGCCTTTT True ACATCTGAA ATTTTGGCA True True - AAAAGGCC TTGC GGCCTTTT TTCAGATGT 64 STM2402 intergenic 2515480 2516004 - down GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTT AACCCGTTGAAGCGAGCACGGAGTAGAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTTTCAGATGTAGAGTGACGCTTCCCCC GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTT 523 TTerm_0655 NC_003197.2 2515972 2515982 11 2515987 2515997 11 4 100 0 22 45 54 45 54 0 2515984 AAACAGGAGCC GGCTCCTGTTT True GCAAAGAAA GCTTTTCTA True True - AAACAGGAGCC CCAT GGCTCCTGTTT TTTCTTTGC 84 STM2401 intergenic 2515480 2516004 + down AAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTC GGGGGAAGCGTCACTCTACATCTGAAAAAGGCCGCAAGGCCTTTTATTTTGGCATTTCGCATTGTCATAATATTCATATCGTAAATTACTCATTCCTGCTTTTAGCGATAAGTCTCCTGTTTACAGGCGATTTTTTACTGTGTCGGCGGCGTCGCTCAATAGCGATTCATCACTGTCAGAAATTAAACTGTCGCCGATTCCCGACACTTGTAAGTTACTAAAAGTAAATAAGAAAATGCCTCTTGTTTCACCTCATTTTTAGGCGTACATTAGCGCCGTCTGGAGCGATGACGCGCAGAATTCTGAGGTGATGCAGGCGGTCGAAACACGAATAATTCTCAATTTCGTATTATCCGGCATCAACTCTCTATAATCAGGTAAGTGTAAGTTCATTTAGGCGTACGACAGGTACGCGGAGAGATGAAACGTGAAATATTTCTTTATGGGCATTTCATTTATGGTCATCGTTTGGGCCGGTACTTTCGCCCTGATGATTTAAAAGTACAATGCAAAGAAAAACAGGAGCCATGGGGCTCCTGTTTGCTTTTCTACTCCGTGCTCGCTTCAACGGGTT GAAAAGCAAACAGGAGCCCCATGGCTCCTGTT 32 TTerm_0656 NC_003197.2 2515972 2515982 11 2515987 2515997 11 4 100 0 22 45 54 45 54 0 2515984 AAACAGGAGCC GGCTCCTGTTT True GCAAAGAAA GCTTTTCTA True True - AAACAGGAGCC CCAT GGCTCCTGTTT TTTCTTTGC 84 STM2402 intergenic 2515480 2516004 - down GAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTT AACCCGTTGAAGCGAGCACGGAGTAGAAAAGCAAACAGGAGCCCCATGGCTCCTGTTTTTCTTTGCATTGTACTTTTAAATCATCAGGGCGAAAGTACCGGCCCAAACGATGACCATAAATGAAATGCCCATAAAGAAATATTTCACGTTTCATCTCTCCGCGTACCTGTCGTACGCCTAAATGAACTTACACTTACCTGATTATAGAGAGTTGATGCCGGATAATACGAAATTGAGAATTATTCGTGTTTCGACCGCCTGCATCACCTCAGAATTCTGCGCGTCATCGCTCCAGACGGCGCTAATGTACGCCTAAAAATGAGGTGAAACAAGAGGCATTTTCTTATTTACTTTTAGTAACTTACAAGTGTCGGGAATCGGCGACAGTTTAATTTCTGACAGTGATGAATCGCTATTGAGCGACGCCGCCGACACAGTAAAAAATCGCCTGTAAACAGGAGACTTATCGCTAAAAGCAGGAATGAGTAATTTACGATATGAATATTATGACAATGCGAAATGCCAAAATAAAAGGCCTTGCGGCCTTTTTCAGATGTAGAGTGACGCTTCCCCC GAAAAGCAAACAGGAGCCCCATGGCTCCTGTT 32 TTerm_0657 NC_003197.2 2528905 2528915 11 2528920 2528930 11 4 90 0 17 40 59 40 60 0 2528917 AAACCCCCGCT AGCGAGGGTTT True AAAAGCAAA GAATGTTGG True False - AAACCCTCGCT GAAA AGCGGGGGTTT TTTGCTTTT 66 STM2411 intergenic 2528746 2528938 - down CAACATTCAAACCCTCGCTGAAAAGCGGGGGTTTTTGCTTTTTGTCACAAAATTTATGGCCTCTGATCTGCTCTTCAGGTGCGTTTGTTTGCCGCTGCTTTTGCGGTCAATATGAGCTTTTGTTAGATTGCTTCATAATGCGAATATACTTATTATTCATGCGCCTTATATAATGATGTGAGCATTAAAGCA GCGGTTCGATCCCGCTTAGCTCCACCAACATTCAAACCCTCGCTGAAAAGCGGGGGTTTTTGCTTTTTGTCACAAAATTTATGGCCTCTGATCTGCTCTTCAGGTGCGTTTGTTTGCCGCTGCTTTTGCGGTCAATATGAGCTTTTGTTAGATTGCTTCATAATGCGAATATACTTATTATTCATGCGCCTTATATAATGATGTGAGCATTAAAGCAATGCCGGATAAGTGTAACGTATTAA CAACATTCAAACCCTCGCTGAAAAGCGGGGGTT 33 TTerm_0658 NC_003197.2 2532234 2532244 11 2532250 2532260 11 5 100 0 22 54 45 54 45 0 2532246 AAAAAAGCGCC GGCGCTTTTTT True ACCAATGTA GCTATCTGC True True - AAAAAAGCGCC TTTAG GGCGCTTTTTT TACATTGGT 84 STM2419 intergenic 2532224 2532393 + down CACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATATGGAAGATTCGAACCTGTCGCAGGTTCGGGTCTTGCCTGATGCGCTGCGCTTATCAGGCCTACAGACGACACCGCACACGTAGGCCGGATAAGACGTTAGTCGCCATCCGGCACAGACAT TCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATATGGAAGATTCGAACCTGTCGCAGGTTCGGGTCTTGCCTGATGCGCTGCGCTTATCAGGCCTACAGACGACACCGCACACGTAGGCCGGATAAGACGTTAGTCGCCATCCGGCACAGACATTATACCGTCAACGCCGCCACCAGTT ATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTT 159 TTerm_0659 NC_003197.2 2532234 2532244 11 2532250 2532260 11 5 100 0 22 54 45 54 45 0 2532246 AAAAAAGCGCC GGCGCTTTTTT True ACCAATGTA GCTATCTGC True True - AAAAAAGCGCC TTTAG GGCGCTTTTTT TACATTGGT 84 STM2420 intergenic 2532224 2532393 - down ATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTTTACATTGGTG AACTGGTGGCGGCGTTGACGGTATAATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTTTACATTGGTGGGTCGTGCAGGATTCGAACCTGCGA ATGTCTGTGCCGGATGGCGACTAACGTCTTATCCGGCCTACGTGTGCGGTGTCGTCTGTAGGCCTGATAAGCGCAGCGCATCAGGCAAGACCCGAACCTGCGACAGGTTCGAATCTTCCATATCGCAGATAGCAAAAAAGCGCCTTTAGGGCGCTTTTT 159 TTerm_0660 NC_003197.2 2533512 2533520 9 2533529 2533537 9 8 100 0 18 33 66 33 66 0 2533524 GACTGGCGA TCGCCAGTC True TAAAAATGG AAATAAAAT True False - GACTGGCGA GAGGATGT TCGCCAGTC CCATTTTTA 68 STM2421 intergenic 2533356 2533546 - down ATTTTATTTGACTGGCGAGAGGATGTTCGCCAGTCCATTTTTATGAACAAGGACACAGCATGAAAGAAATTATTCTCTCCTCCGGTATTGGATTTGGTATTGGCGCATTTTTTACTTTATGCCGTATACCTATTCCCGCACCAAATGTTTTACCCGGGGTATTATCTATTGTATTTATGTATATTGGGTA TGTCGACCAAATCATTAGCACATTAATTTTATTTGACTGGCGAGAGGATGTTCGCCAGTCCATTTTTATGAACAAGGACACAGCATGAAAGAAATTATTCTCTCCTCCGGTATTGGATTTGGTATTGGCGCATTTTTTACTTTATGCCGTATACCTATTCCCGCACCAAATGTTTTACCCGGGGTATTATCTATTGTATTTATGTATATTGGGTATCTTGTCGTTAAATCTATTTTTTAC ATTTTATTTGACTGGCGAGAGGATGTTCGCCAGT 34 TTerm_0661 NC_003197.2 2541037 2541044 8 2541050 2541057 8 5 100 0 16 25 75 25 75 0 2541046 AACCCCCG CGGGGGTT True TGATAAAAA ACGTTAAAA True False - AACCCCCG CCTGT CGGGGGTT TTTTTATCA 80 STM2428 intergenic 2541025 2541087 - down AGGTTAACGCAGGTGTGACATTTTTAACGTAACCCCCGCCTGTCGGGGGTTTTTTATCATTG GCGAGGTGATGGACGCTAACGCCTGAGGTTAACGCAGGTGTGACATTTTTAACGTAACCCCCGCCTGTCGGGGGTTTTTTATCATTGATGGTGTGATATGGAACCAATCGAA AGGTTAACGCAGGTGTGACATTTTTAACGTAACCCCCGCCTGTCGGGGGT 50 TTerm_0662 NC_003197.2 2544224 2544234 11 2544241 2544251 11 6 100 0 22 63 36 63 36 0 2544237 AAAAAAGCACC GGTGCTTTTTT True AAACGCGTA GTGGCCTGC True True - AAAAAAGCACC CAAAAA GGTGCTTTTTT TACGCGTTT 76 STM2430 intergenic 2544201 2544492 + down TGCCAGCATGTTAAAAACGCGTAAAAAAGCACCTTTTTGGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCACCTCACCTGGCATTGATTCACCCTGCCGGAACTGGTATTTAACCAGACTAATTATTTTGATGCGCGAAATTAATCGTTACAGGAAAAGCGTTAGCTGAATCGATTTTATGATTTGGTTCAAATCTTCCTTTCGCGGCATAATGTTTAATGACGAGCGAAACGTCAGCGGCCATAAGTTGCCAGCAACGGATTGCGTAGAACACCTTTTGTGTCGCGTCCC TACTGAGAAAGAACTGCAACAGTGATGCCAGCATGTTAAAAACGCGTAAAAAAGCACCTTTTTGGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCACCTCACCTGGCATTGATTCACCCTGCCGGAACTGGTATTTAACCAGACTAATTATTTTGATGCGCGAAATTAATCGTTACAGGAAAAGCGTTAGCTGAATCGATTTTATGATTTGGTTCAAATCTTCCTTTCGCGGCATAATGTTTAATGACGAGCGAAACGTCAGCGGCCATAAGTTGCCAGCAACGGATTGCGTAGAACACCTTTTGTGTCGCGTCCCGTTTACGCCGGCGCTAACAATACAG GGGACGCGACACAAAAGGTGTTCTACGCAATCCGTTGCTGGCAACTTATGGCCGCTGACGTTTCGCTCGTCATTAAACATTATGCCGCGAAAGGAAGATTTGAACCAAATCATAAAATCGATTCAGCTAACGCTTTTCCTGTAACGATTAATTTCGCGCATCAAAATAATTAGTCTGGTTAAATACCAGTTCCGGCAGGGTGAATCAATGCCAGGTGAGGTGAAAGTTTGAAGCAGGCCACAAAAAAGCACCCAAAAAGGTGCTTTTT 268 TTerm_0663 NC_003197.2 2557506 2557513 8 2557518 2557525 8 4 100 0 16 25 75 25 75 0 2557515 ATCCCCGC GCGGGGAT True GTAAAAAAA GGGCATTTT True True - ATCCCCGC CTCC GCGGGGAT TTTTTTTAC 80 STM2446 intergenic 2557404 2557627 - down AGGTAAAACCCTGTCGGATGGCAGCGCAAACGCTTTATTCGACCTACGATTGGTAGGCCTGATAAGCGCAGCGCCATCAGGCAGAACAGCATAAAAATGCCCATCCCCGCCTCCGCGGGGATTTTTTTACCTAATATTTACCTGAATTAGTGAGCTATTCCTCAGCACTTATTTGTTATTACTGTATTTTCAGTGTTAATGGAGTGTAAGACTCCATATTCAA CGCTGGATCGCCTGTTAGCGCTATAAGGTAAAACCCTGTCGGATGGCAGCGCAAACGCTTTATTCGACCTACGATTGGTAGGCCTGATAAGCGCAGCGCCATCAGGCAGAACAGCATAAAAATGCCCATCCCCGCCTCCGCGGGGATTTTTTTACCTAATATTTACCTGAATTAGTGAGCTATTCCTCAGCACTTATTTGTTATTACTGTATTTTCAGTGTTAATGGAGTGTAAGACTCCATATTCAAAAGGAGACATTGAAAATGGGTAAAC AGGTAAAACCCTGTCGGATGGCAGCGCAAACGCTTTATTCGACCTACGATTGGTAGGCCTGATAAGCGCAGCGCCATCAGGCAGAACAGCATAAAAATGCCCATCCCCGCCTCCGCGGGGA 121 TTerm_0664 NC_003197.2 2558546 2558554 9 2558559 2558567 9 4 100 0 18 44 55 44 55 0 2558556 AATGCCACG CGTGGCATT True AAAATGAGA AATGGAGGC True False - AATGCCACG ACTG CGTGGCATT TCTCATTTT 76 STM2447 intergenic 2558537 2558621 - down ATTTGCGCCTGAACAAACCGCTTCGCTTAAAAACAAGGTAAAATAGCCTCCATTAATGCCACGACTGCGTGGCATTCTCATTTT TGCGCAAAATTATCTGGCGTCGTTAATTTGCGCCTGAACAAACCGCTTCGCTTAAAAACAAGGTAAAATAGCCTCCATTAATGCCACGACTGCGTGGCATTCTCATTTTCAGGAGGAATCATGTCTCAGGTTCA ATTTGCGCCTGAACAAACCGCTTCGCTTAAAAACAAGGTAAAATAGCCTCCATTAATGCCACGACTGCGTGGCAT 75 TTerm_0665 NC_003197.2 2579938 2579944 7 2579949 2579955 7 4 100 0 14 14 85 14 85 0 2579946 GCGCAGG CCTGCGC True ACAAAAAAG CAGAAGAGA True False - GCGCAGG TTCT CCTGCGC CTTTTTTGT 68 STM2472 intergenic 2579794 2579978 - down ATAACGCATTACTCTCTCTTCTGGCGCAGGTTCTCCTGCGCTTTTTTGTCTATGGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTAAGCCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG TTGAAGCGCAAACCACGCCGCTTTAATAACGCATTACTCTCTCTTCTGGCGCAGGTTCTCCTGCGCTTTTTTGTCTATGGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTAAGCCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGGGTCCCAATGGGGGACGAAAAGAGCT ATAACGCATTACTCTCTCTTCTGGCGCAGGTTCTCCTGCG 40 TTerm_0666 NC_003197.2 2596796 2596806 11 2596814 2596824 11 7 100 0 22 54 45 54 45 0 2596809 AAAAGGCGACT AGTCGCCTTTT True GGGCACAAA CTTATCCCC True True - AAAAGGCGACT CAACGAA AGTCGCCTTTT TTTGTGCCC 76 STM2481 intergenic 2596759 2597322 + down GATCCCGGCCAGCCTGATACGAGGTGTCGGGCACAAAAAAGGCGACTTTCGTTGAGTCGCCTTTTCTTATCCCCTATGGGAGCGCGGTGCCTTCCAGGCATTTATTTACGAAGCATGACTTCGATAAAATCTTTCCAGTTCCCCAGTTCACGTTCAATCATAATAGCCTCTCTTATTATTATGGGTATTCTACGTAGTTAGCGGTATAGAGAGAAGTTCATTTAACCGATTGTTGCGATATCCTCTGGTTATGCTGTCTATGATATTACTATGGCGCTGTAGCCATAAATTTTATGTGACTTACTGCAATATTTAGCAACATTAATACCTTTTCTACTACTTTATCAAATTGGGTTAAAAAACAAACAATTGCATATGCACAAAATAGGATTTATACCGCGAAGTATAAACAAGCCACATCTGGAACGTTTTGGAATCATTATTCACATTCACTCAACAATGTTATATTGATTGCCGATCAGCGCTGGATAAATAACCATAAACGGCCACACTTATTATCCCGCAGACGATACTATTGATTATTTATTCGAATTTCGCGTTAA TTAACGCGAAATTCGAATAAATAATCAATAGTATCGTCTGCGGGATAATAAGTGTGGCCGTTTATGGTTATTTATCCAGCGCTGATCGGCAATCAATATAACATTGTTGAGTGAATGTGAATAATGATTCCAAAACGTTCCAGATGTGGCTTGTTTATACTTCGCGGTATAAATCCTATTTTGTGCATATGCAATTGTTTGTTTTTTAACCCAATTTGATAAAGTAGTAGAAAAGGTATTAATGTTGCTAAATATTGCAGTAAGTCACATAAAATTTATGGCTACAGCGCCATAGTAATATCATAGACAGCATAACCAGAGGATATCGCAACAATCGGTTAAATGAACTTCTCTCTATACCGCTAACTACGTAGAATACCCATAATAATAAGAGAGGCTATTATGATTGAACGTGAACTGGGGAACTGGAAAGATTTTATCGAAGTCATGCTTCGTAAATAAATGCCTGGAAGGCACCGCGCTCCCATAGGGGATAAGAAAAGGCGACTCAACGAAAGTCGCCTTT 526 TTerm_0667 NC_003197.2 2606115 2606122 8 2606131 2606138 8 8 100 0 16 12 87 12 87 0 2606126 CAGGCCGC GCGGCCTG True AAAAGCCTC GAAAGGGAA True False - CAGGCCGC ACATCAGC GCGGCCTG GAGGCTTTT 80 STM2491 intergenic 2606108 2606155 + down AAGCCTCAGGCCGCGCTGATGTGCGGCCTGGAAAGGGAATGCGCCGT GAACTGGCTGAAAGAAAACGCGTAAAAGCCTCAGGCCGCGCTGATGTGCGGCCTGGAAAGGGAATGCGCCGTCAGGCTTGCCGCGCCAGACGCCCTT ACGGCGCATTCCCTTTCCAGGCCGCACATCAGCGCGGCCT 40 TTerm_0668 NC_003197.2 2606115 2606122 8 2606131 2606138 8 8 100 0 16 12 87 12 87 0 2606126 CAGGCCGC GCGGCCTG True AAAAGCCTC GAAAGGGAA True False - CAGGCCGC ACATCAGC GCGGCCTG GAGGCTTTT 80 STM2492 intergenic 2606108 2606155 - down ACGGCGCATTCCCTTTCCAGGCCGCACATCAGCGCGGCCTGAGGCTT AAGGGCGTCTGGCGCGGCAAGCCTGACGGCGCATTCCCTTTCCAGGCCGCACATCAGCGCGGCCTGAGGCTTTTACGCGTTTTCTTTCAGCCAGTTC ACGGCGCATTCCCTTTCCAGGCCGCACATCAGCGCGGCCT 40 TTerm_0669 NC_003197.2 2606565 2606573 9 2606580 2606588 9 6 100 0 18 44 55 44 55 0 2606576 AATGCCGCA TGCGGCATT True ACAATAAAA AAAAAAAAG True False - AATGCCGCA CCGTGT TGCGGCATT TTTTATTGT 76 STM2493 intergenic 2606508 2606695 - down AGCGGTCAGTACAAAAGTTGTAAAGCGTGAACGACATCATAGTGCCCTGCCGCCATTTTGCGCACGCCTGATGAGGGACAAGCGCTTAGAAAGCCGCTCTTTTTTTTAATGCCGCACCGTGTTGCGGCATTTTTATTGTCGGAACCTACAAAATTCTCGCTGCTGAAGGAAAACTGTATTGTAGAAA GTCAGGTGACGGATGCCTCATCCTGAGCGGTCAGTACAAAAGTTGTAAAGCGTGAACGACATCATAGTGCCCTGCCGCCATTTTGCGCACGCCTGATGAGGGACAAGCGCTTAGAAAGCCGCTCTTTTTTTTAATGCCGCACCGTGTTGCGGCATTTTTATTGTCGGAACCTACAAAATTCTCGCTGCTGAAGGAAAACTGTATTGTAGAAATTGATTCCGCTACCGCCAATCAGCT AGCGGTCAGTACAAAAGTTGTAAAGCGTGAACGACATCATAGTGCCCTGCCGCCATTTTGCGCACGCCTGATGAGGGACAAGCGCTTAGAAAGCCGCTCTTTTTTTTAATGCCGCACCGTGTTGCGGCAT 130 TTerm_0670 NC_003197.2 2611991 2612001 11 2612007 2612017 11 5 100 0 22 54 45 54 45 0 2612003 AAAAGCCGACT AGTCGGCTTTT True ATTCAAAAA AATTATTTA True True - AAAAGCCGACT TTAAG AGTCGGCTTTT TTTTTGAAT 76 STM2498 intergenic 2611956 2612032 - down AGTGAATAAATAATTAAAAGCCGACTTTAAGAGTCGGCTTTTTTTTGAATAAAACCACTCATAACAAACACACTTA GCGATAAGATTTTTGGTACCAAATAAGTGAATAAATAATTAAAAGCCGACTTTAAGAGTCGGCTTTTTTTTGAATAAAACCACTCATAACAAACACACTTAGAGGAAAACACTATGACGCGCCGTG AGTGAATAAATAATTAAAAGCCGACTTTAAGAGTCGGCTTT 41 TTerm_0671 NC_003197.2 2622734 2622743 10 2622748 2622757 10 4 100 0 20 50 50 50 50 0 2622745 AACCCTCTGT ACAGAGGGTT True TAAATAAAA AAATTCACC True False - AACCCTCTGT TTTT ACAGAGGGTT TTTTATTTA 64 STM2510 intergenic 2622652 2622804 - down AGCCGATAATCCTTCCTGTGTTTTCATGAACAGGTAAAGGTGAATTTAACCCTCTGTTTTTACAGAGGGTTTTTATTTATGTGCATTCATGAATTTTCTATGTGGCGCACAGTTCCTGACGGCAAATTTGACGTAATTACGAACCCACGAAG CGCCGGCTACCATTGAGTGGGAATAAGCCGATAATCCTTCCTGTGTTTTCATGAACAGGTAAAGGTGAATTTAACCCTCTGTTTTTACAGAGGGTTTTTATTTATGTGCATTCATGAATTTTCTATGTGGCGCACAGTTCCTGACGGCAAATTTGACGTAATTACGAACCCACGAAGGTTGGTTGTATCTTGCCGTGGTCGT AGCCGATAATCCTTCCTGTGTTTTCATGAACAGGTAAAGGTGAATTTAACCCTCTGTTTTTACAGAGGGT 70 TTerm_0672 NC_003197.2 2627550 2627563 14 2627569 2627582 14 5 92 0 23 32 67 30 69 0 2627565 CAAAACCGGGCAGG CCCGCCCGGTTTTG True ATTCGCCTC TCTAACTTA True True - CAAAACCGGGCGGG TGTTC CCTGCCCGGTTTTG GAGGCGAAT 94 STM2512 intergenic 2627427 2627589 + down TCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTGTCTAACT CAAATCCGTCACGCCGGGCACGTAATCCAACACTCCCCCACCCTTTGCAGCGCGATGTTGGGTTTCGACTTCGCCTCAGCCAACCTACGCGCCACGTCGGATAAGGTGTAGCCATAATCTGACGATCAACCGGTTTGTCATTCGCCTCAAAACCGGGCAGGGAACACCCGCCCGGTTTTGTCTAACTTACCAGTTATAGCGCAGATTGAGGC AGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTT 39 TTerm_0673 NC_003197.2 2627550 2627563 14 2627569 2627582 14 5 92 0 23 32 67 30 69 0 2627565 CAAAACCGGGCAGG CCCGCCCGGTTTTG True ATTCGCCTC TCTAACTTA True True - CAAAACCGGGCGGG TGTTC CCTGCCCGGTTTTG GAGGCGAAT 94 STM2513 intergenic 2627427 2627589 - down AGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTTGAGGCGAATGACAAACCGGTTGATCGTCAGATTATGGCTACACCTTATCCGACGTGGCGCGTAGGTTGGCTGAGGCGAAGTCGAAACCCAACATCGCGCTGCAAAGGGTGGGGGAGTGTTGGA GCCTCAATCTGCGCTATAACTGGTAAGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTTGAGGCGAATGACAAACCGGTTGATCGTCAGATTATGGCTACACCTTATCCGACGTGGCGCGTAGGTTGGCTGAGGCGAAGTCGAAACCCAACATCGCGCTGCAAAGGGTGGGGGAGTGTTGGATTACGTGCCCGGCGTGACGGATTTG AGTTAGACAAAACCGGGCGGGTGTTCCCTGCCCGGTTTT 39 TTerm_0674 NC_003197.2 2652997 2653008 12 2653014 2653025 12 5 91 0 19 45 54 45 54 0 2653010 AAAACGGCCCCT AGGAGCCGTTTT True AAAACAGGA TTAAAACAC True True - AAAACGGCTCCT GGTGT AGGGGCCGTTTT TCCTGTTTT 70 STM2520 intergenic 2652941 2653048 - down ATCGTCACGGTTGTGTGTTTTAAAAAACGGCTCCTGGTGTAGGGGCCGTTTTCCTGTTTTTAACAACGGCGTAAAAATGACGCGCGTTGTCTGATGATTTTTTAAAT GTACGGTCTACGCGATTACGCGTTAATCGTCACGGTTGTGTGTTTTAAAAAACGGCTCCTGGTGTAGGGGCCGTTTTCCTGTTTTTAACAACGGCGTAAAAATGACGCGCGTTGTCTGATGATTTTTTAAATGAGGCTTTAAACATGGTACCTGTGG ATCGTCACGGTTGTGTGTTTTAAAAAACGGCTCCTGGTGTAGGGGCCGTTT 51 TTerm_0675 NC_003197.2 2665385 2665393 9 2665401 2665409 9 7 88 0 13 94 5 100 0 0 2665396 AAAATTAAT ATTAACTTT True ATTCCGGAA AAATTAAAT True False - AAAGTTAAT GAGAATT ATTAATTTT TTCCGGAAT 34 STM2531 intergenic 2665318 2665447 - down ACAACTCTTCAGAATAAATTATGAATTTCATTTAATTTAAAGTTAATGAGAATTATTAATTTTTCCGGAATTACCCTTAATGAGGGAGCTTGATAAATATCAAGAGAACCAGCGCATAAAAACGTGAGA CGGTTAATTTTGAATTAATACGTTAACAACTCTTCAGAATAAATTATGAATTTCATTTAATTTAAAGTTAATGAGAATTATTAATTTTTCCGGAATTACCCTTAATGAGGGAGCTTGATAAATATCAAGAGAACCAGCGCATAAAAACGTGAGAATGGGTTTTTATTTGACGAGTCGGA ACAACTCTTCAGAATAAATTATGAATTTCATTTAATTTAAAGTTAATGAGAATTATTAATTT 62 TTerm_0676 NC_003197.2 2718440 2718452 13 2718458 2718470 13 5 84 0 16 46 53 45 54 0 2718454 ATGGCTCTTCCGC GCAGAAGAGCTAT True GTTTGAAAA CAAGTTTAT True False - ATAGCTCTTCTGC ATGAG GCGGAAGAGCCAT TTTTCAAAC 56 STM2572 intergenic 2718437 2718476 + down AAATGGCTCTTCCGCCTCATGCAGAAGAGCTATCAAGTT GGCGCTGGTAAAAAAACTGGTTTGAAAATGGCTCTTCCGCCTCATGCAGAAGAGCTATCAAGTTTATTGCGCTTCTTTAGCGTGAATCA AACTTGATAGCTCTTCTGCATGAGGCGGAAGAGCCA 36 TTerm_0677 NC_003197.2 2718440 2718452 13 2718458 2718470 13 5 84 0 16 46 53 45 54 0 2718454 ATGGCTCTTCCGC GCAGAAGAGCTAT True GTTTGAAAA CAAGTTTAT True False - ATAGCTCTTCTGC ATGAG GCGGAAGAGCCAT TTTTCAAAC 56 STM2573 intergenic 2718437 2718476 - down AACTTGATAGCTCTTCTGCATGAGGCGGAAGAGCCATTT TGATTCACGCTAAAGAAGCGCAATAAACTTGATAGCTCTTCTGCATGAGGCGGAAGAGCCATTTTCAAACCAGTTTTTTTACCAGCGCC AACTTGATAGCTCTTCTGCATGAGGCGGAAGAGCCA 36 TTerm_0678 NC_003197.2 2737115 2737123 9 2737128 2737136 9 4 88 0 13 27 72 25 75 0 2737125 AAGCCCGCC GGCAGGCTT True CCATAAAAA CAGATTCAT True False - AAGCCTGCC TGCG GGCGGGCTT TTTTTATGG 66 STM2589 intergenic 2737105 2737434 - down ACCGGATTTCCGGTCTCTTTCGTTTAACAAGGAACAGATATGACTATGTCGCGCGTAATTTCGCTGGCGGCAGGGGTTTCCCTGTCCGTTTTATTTTCCACCGCTGCCGTTGCCGATAACGGAAGAGGAAGCGGTAACAGCAATATTGAAAACCAGACCCGGATTTATACCGGTACTGACCGCGGGCAGAAACAGCACCGCGAGGCAAAGGGACAAATAATCACGCGGAGCGTCCAGTGTTCGCTGCCGGCATATTTACGTGACCCGGATAATCAGTGCTGAGATGTGAATGAATCTGAAGCCTGCCTGCGGGCGGGCTTTTTTATGGA GGTCGGGGAACAACTTCACAAACTGACCGGATTTCCGGTCTCTTTCGTTTAACAAGGAACAGATATGACTATGTCGCGCGTAATTTCGCTGGCGGCAGGGGTTTCCCTGTCCGTTTTATTTTCCACCGCTGCCGTTGCCGATAACGGAAGAGGAAGCGGTAACAGCAATATTGAAAACCAGACCCGGATTTATACCGGTACTGACCGCGGGCAGAAACAGCACCGCGAGGCAAAGGGACAAATAATCACGCGGAGCGTCCAGTGTTCGCTGCCGGCATATTTACGTGACCCGGATAATCAGTGCTGAGATGTGAATGAATCTGAAGCCTGCCTGCGGGCGGGCTTTTTTATGGAGGCAATATGCCAGTACTTATTTCCG ACCGGATTTCCGGTCTCTTTCGTTTAACAAGGAACAGATATGACTATGTCGCGCGTAATTTCGCTGGCGGCAGGGGTTTCCCTGTCCGTTTTATTTTCCACCGCTGCCGTTGCCGATAACGGAAGAGGAAGCGGTAACAGCAATATTGAAAACCAGACCCGGATTTATACCGGTACTGACCGCGGGCAGAAACAGCACCGCGAGGCAAAGGGACAAATAATCACGCGGAGCGTCCAGTGTTCGCTGCCGGCATATTTACGTGACCCGGATAATCAGTGCTGAGATGTGAATGAATCTGAAGCCTGCCTGCGGGCGGGCT 319 TTerm_0679 NC_003197.2 2740814 2740825 12 2740830 2740841 12 4 91 0 19 37 62 36 63 0 2740827 GACAAAACCGCC GGCGGTTCTGTC True CGTAAAACG TGAATCTGT True False - GACAGAACCGCC TCCG GGCGGTTTTGTC CGTTTTACG 78 STM2590 intergenic 2740796 2740858 - down ACAACAGAACAGATTCAGACAGAACCGCCTCCGGGCGGTTTTGTCGTTTTACGGGGTAATAA GTCAGGTTGTGGTGATTGGCCGCTGACAACAGAACAGATTCAGACAGAACCGCCTCCGGGCGGTTTTGTCGTTTTACGGGGTAATAAATGGGAAAGGGCGGCGGAAAAGGGC ACAACAGAACAGATTCAGACAGAACCGCCTCCGGGCGGTTTTGT 44 TTerm_0680 NC_003197.2 2761733 2761741 9 2761747 2761755 9 5 100 0 18 44 55 44 55 0 2761743 TGACCAGTG CACTGGTCA True GAAAAAATT TGGGTCATG True False - TGACCAGTG GACTT CACTGGTCA AATTTTTTC 68 STM2616 intergenic 2761723 2762067 - down ATTGCAAAACTGGATTAAAACGGCTATATTTTATGTAAATCTGATATCGTCGCCATAGCTTCAATCGTCGACCAAACAAATTCAAGCCTCGCCATCGTGCGGGGTTTTCCATTTCTAAGTCTGCCAATCGGTATTTTTTGCGCTATGTACAACGCAATACAACCATAGAGCCTTTCAGAAGTGCGTCATTGGGAATTATCAGTATGACTTTTTTCTGCGATGCTATAGTTAATATGGCATTTGATAATGCTCTCGATACTGAAAACACTGGGTGGGGATACACCCGTTTCGCAGAGACAACTGCATGACCCATGACCAGTGGACTTCACTGGTCAATTTTTTCC TTGCTGAGAAGCTGGCGACGTGGTGATTGCAAAACTGGATTAAAACGGCTATATTTTATGTAAATCTGATATCGTCGCCATAGCTTCAATCGTCGACCAAACAAATTCAAGCCTCGCCATCGTGCGGGGTTTTCCATTTCTAAGTCTGCCAATCGGTATTTTTTGCGCTATGTACAACGCAATACAACCATAGAGCCTTTCAGAAGTGCGTCATTGGGAATTATCAGTATGACTTTTTTCTGCGATGCTATAGTTAATATGGCATTTGATAATGCTCTCGATACTGAAAACACTGGGTGGGGATACACCCGTTTCGCAGAGACAACTGCATGACCCATGACCAGTGGACTTCACTGGTCAATTTTTTCCGCCATTAGCTCAACTGGAAAGAGCA ATTGCAAAACTGGATTAAAACGGCTATATTTTATGTAAATCTGATATCGTCGCCATAGCTTCAATCGTCGACCAAACAAATTCAAGCCTCGCCATCGTGCGGGGTTTTCCATTTCTAAGTCTGCCAATCGGTATTTTTTGCGCTATGTACAACGCAATACAACCATAGAGCCTTTCAGAAGTGCGTCATTGGGAATTATCAGTATGACTTTTTTCTGCGATGCTATAGTTAATATGGCATTTGATAATGCTCTCGATACTGAAAACACTGGGTGGGGATACACCCGTTTCGCAGAGACAACTGCATGACCCATGACCAGTGGACTTCACTGGTC 334 TTerm_0681 NC_003197.2 2762799 2762804 6 2762810 2762815 6 5 100 0 12 33 66 33 66 0 2762806 ACACGC GCGTGT True AATAAAAAA CTCTGTCGC True False - ACACGC CGCGA GCGTGT TTTTTTATT 56 STM2617 intergenic 2762637 2762903 - down ACACAAACAGTTATCCGGGGCTATATTCCCAGTACGCCAGCAAAATCTGGCGTCGGGATTGGCGTCCCGGAATTTCACCGCGACAGAGACACGCCGCGAGCGTGTTTTTTATTGTCGTTTGTATACGCGCATTTGAATTATGGTGGGGCGTATGGGGGAGCCGAAAGGCTCGCCGGTCGGTGATCTGGTTACGCCAACCCTGTACGTCTCACCACCCAATCCGATTGGCGTCGGCGGTGGTGATAAACAAAACAATCACCGGAGGG CTTTCAACCTATACGCACTTAATTGACACAAACAGTTATCCGGGGCTATATTCCCAGTACGCCAGCAAAATCTGGCGTCGGGATTGGCGTCCCGGAATTTCACCGCGACAGAGACACGCCGCGAGCGTGTTTTTTATTGTCGTTTGTATACGCGCATTTGAATTATGGTGGGGCGTATGGGGGAGCCGAAAGGCTCGCCGGTCGGTGATCTGGTTACGCCAACCCTGTACGTCTCACCACCCAATCCGATTGGCGTCGGCGGTGGTGATAAACAAAACAATCACCGGAGGGCGTCATTATGACCACTCAAATCTCT ACACAAACAGTTATCCGGGGCTATATTCCCAGTACGCCAGCAAAATCTGGCGTCGGGATTGGCGTCCCGGAATTTCACCGCGACAGAGACACGCCGCGAGCGTG 104 TTerm_0682 NC_003197.2 2765909 2765915 7 2765920 2765926 7 4 100 0 14 28 71 28 71 0 2765917 AACCCGC GCGGGTT True AGGCAAAAA CAGATAAAA True False - AACCCGC TGCG GCGGGTT TTTTTGCCT 68 STM2622 intergenic 2765791 2766077 - down GATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAG AAATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTA GATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGT 168 TTerm_0683 NC_003197.2 2765939 2765944 6 2765952 2765957 6 7 100 0 12 33 66 33 66 0 2765947 AACCCG CGGGTT True TAAAAGAAA CACATTCAT True False - AACCCG CCGAGTA CGGGTT TTTCTTTTA 56 STM2622 intergenic 2765791 2766077 - down GATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAG AAATGTCTAAGACTATAAGCGATTAGATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGTTTTCTTTTATCTGAACCCGCTGCGGCGGGTTTTTTGCCTAAAATGTGATATGAAACAACACACTAGCCTTTGCAAAAAGTGCTATTCACCCCTTGAATATTCTTTCTAACAGGTATACTGTGTTTATATACAGTGGTTGAATGTAGAGGGAATTATGAGAATTGAACTTGTTA GATAAATCTGTTTTCAACATTGCAGCAAAATCACAGGAAGATCGAGACAAAGTTAGCATGGCGATATATGGAAATGTCGGAGCAGAACACCAAGAAGTAAGCGTAATTTGAATGAATGTGAACCCGCCGAGTACGGGT 138 TTerm_0684 NC_003197.2 2770878 2770883 6 2770892 2770897 6 8 100 0 12 16 83 16 83 0 2770887 ACGCCC GGGCGT True TTAAGAAAA GCCCTGTCC True False - ACGCCC GCTTCGGT GGGCGT TTTTCTTAA 64 STM2631 intergenic 2770873 2770988 + down GAAAACGCCCACCGAAGCGGGCGTGCCCTGTCCGGTCCAACCGACCAAAGCGAACCGGACCTAACAACCAGATATATCGGGGTGCTGTTAAGGCACCTCCATTCTACACGAATTG AAAATTTTATCAGACCATCCATTAAGAAAACGCCCACCGAAGCGGGCGTGCCCTGTCCGGTCCAACCGACCAAAGCGAACCGGACCTAACAACCAGATATATCGGGGTGCTGTTAAGGCACCTCCATTCTACACGAATTGAGGACAAAACAATGAGTGGAACTAA CAATTCGTGTAGAATGGAGGTGCCTTAACAGCACCCCGATATATCTGGTTGTTAGGTCCGGTTCGCTTTGGTCGGTTGGACCGGACAGGGCACGCCCGCTTCGGTGGGCG 110 TTerm_0685 NC_003197.2 2795751 2795756 6 2795765 2795770 6 8 100 0 12 100 0 100 0 0 2795760 AAATAA TTATTT True CCAAAAGTA GTTTGCTAA True False - AAATAA TTAACACT TTATTT TACTTTTGG 24 STM2655 intergenic 2795691 2795783 - down AAAATTAGCAAACAAATAATTAACACTTTATTTACTTTTGGGTCTCGCGTAATCTGAATCTCCAAAATAAAAGGCCGATTAAGCCTGGCAAC GCCAGCATCAGGCACGGTGGGGATAAAAATTAGCAAACAAATAATTAACACTTTATTTACTTTTGGGTCTCGCGTAATCTGAATCTCCAAAATAAAAGGCCGATTAAGCCTGGCAACAAGGAGAACAGTATGGCAGAAATTA AAAATTAGCAAACAAATAATTAACACTTTATT 32 TTerm_0686 NC_003197.2 2796400 2796417 18 2796422 2796439 18 4 88 0 26 50 50 50 50 0 2796419 AAAACAAAAGGCCCTGTC GACAGGGCCCTTCGTTTT True AACAGACAA ATTTGATGC True True - AAAACGAAGGGCCCTGTC GGAA GACAGGGCCTTTTGTTTT TTGTCTGTT 84 STM2656 intergenic 2796245 2796443 - down AAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGAATTATCCCGCCTACGAAGTTGGTGCTCTTGTAGAACTGATAAGAGCACAACCCACCCAATCATTAACGATGAACTATCCTTTACACGTGCTTATATAAGCAGTGAGG CGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGAATTATCCCGCCTACGAAGTTGGTGCTCTTGTAGAACTGATAAGAGCACAACCCACCCAATCATTAACGATGAACTATCCTTTACACGTGCTTATATAAGCAGTGAGGATTTTCATTGGCTATCAAACCTTTT AAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTT 43 TTerm_0687 NC_003197.2 2802078 2802088 11 2802093 2802103 11 4 90 0 17 40 59 40 60 0 2802090 AAAACGAGCCC GGGCCCGTTTT True TTTAAACAA ATTCAAATT True True - AAAACGGGCCC TGAC GGGCTCGTTTT TTGTTTAAA 82 STM2660 intergenic 2801663 2802119 - down AGTCACAAATTTGAATAAAACGGGCCCTGACGGGCTCGTTTTTGTTTAAAAACCAGGCGAAAATAGGCTTTTGGTTCAAATGTTGTTTGAAAAGTGAACGGTTGAGCTTTTTTTTGCATTTAGGTCTTGTCAGGCTCTAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCATACAGGCCGCCGGGTCAGAAAAGCTTCGTTAAGAAGTCTGTGAGGAAAGCGAAAATAAAGGCTTGACTCAAAAAGAGGAAAGCGTAATATACGCCACCTCGCGACGGTGAGCTGCAAGCCGCGTCGCACCTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAATCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTT ATGATCGTATTGTGGCAGTGCAGTAAGTCACAAATTTGAATAAAACGGGCCCTGACGGGCTCGTTTTTGTTTAAAAACCAGGCGAAAATAGGCTTTTGGTTCAAATGTTGTTTGAAAAGTGAACGGTTGAGCTTTTTTTTGCATTTAGGTCTTGTCAGGCTCTAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCATACAGGCCGCCGGGTCAGAAAAGCTTCGTTAAGAAGTCTGTGAGGAAAGCGAAAATAAAGGCTTGACTCAAAAAGAGGAAAGCGTAATATACGCCACCTCGCGACGGTGAGCTGCAAGCCGCGTCGCACCTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCCTCGGACGAAAAATGAATACCAAATCTCAAGAGTGAACACGTAATTCATTACGAAGTTTAATTCTTTGAGCATCAAACTTTTAAATTGAAGAGTTTGATCATGGCTC AGTCACAAATTTGAATAAAACGGGCCCTGACGGGCTCGTTT 41 TTerm_0688 NC_003197.2 2807416 2807427 12 2807432 2807443 12 4 100 0 24 41 58 41 58 0 2807429 AAAACGGCAGCC GGCTGCCGTTTT True AAACAAGCA TTTATTCGG True True - AAAACGGCAGCC GGAA GGCTGCCGTTTT TGCTTGTTT 88 STM2663 intergenic 2807399 2807435 + down AGCAATACAAACAAGCAAAACGGCAGCCTTCCGGCT TGCCGCTAACAGCAAAAACACCTGAAGCAATACAAACAAGCAAAACGGCAGCCTTCCGGCTGCCGTTTTTTTATTCGGTATCTGAT AGCCGGAAGGCTGCCGTTT 19 TTerm_0689 NC_003197.2 2821560 2821567 8 2821575 2821582 8 7 100 0 16 37 62 37 62 0 2821570 ATGGCCGA TCGGCCAT True CTAAAAAAA CAAACTTTT True True - ATGGCCGA TGTAAAG TCGGCCAT TTTTTTTAG 72 STM2680 intergenic 2821555 2821590 + down AAAAATGGCCGACTTTACATCGGCCATCAAACTTT GGAAGTGCAGGATTTTTTAAGCTAAAAAAATGGCCGACTTTACATCGGCCATCAAACTTTTACTTCGCCTTCGCTACAGTCACCA AAAGTTTGATGGCCGATGTAAAGTCGGCCA 30 TTerm_0690 NC_003197.2 2821560 2821567 8 2821575 2821582 8 7 100 0 16 37 62 37 62 0 2821570 ATGGCCGA TCGGCCAT True CTAAAAAAA CAAACTTTT True True - ATGGCCGA TGTAAAG TCGGCCAT TTTTTTTAG 72 STM2681 intergenic 2821555 2821590 - down AAAGTTTGATGGCCGATGTAAAGTCGGCCATTTTT TGGTGACTGTAGCGAAGGCGAAGTAAAAGTTTGATGGCCGATGTAAAGTCGGCCATTTTTTTAGCTTAAAAAATCCTGCACTTCC AAAGTTTGATGGCCGATGTAAAGTCGGCCA 30 TTerm_0691 NC_003197.2 2839065 2839074 10 2839081 2839090 10 6 100 0 20 20 80 20 80 0 2839077 GCCCCGAACG CGTTCGGGGC True ATAAAAAAG AACAAGCGG True False - GCCCCGAACG TCGTGG CGTTCGGGGC CTTTTTTAT 72 STM2689 intergenic 2839057 2839117 + down TAAAAAAGCCCCGAACGCCACGACGTTCGGGGCAACAAGCGGTGATATTTAAAAGGGATA CAACCACCTGATAACCAGCGGTTGATAAAAAAGCCCCGAACGCCACGACGTTCGGGGCAACAAGCGGTGATATTTAAAAGGGATAAACTATGGGAAGAGTCGCGCCTGTC TATCCCTTTTAAATATCACCGCTTGTTGCCCCGAACGTCGTGGCGTTCGGGG 52 TTerm_0692 NC_003197.2 2844319 2844333 15 2844338 2844352 15 4 86 0 20 53 46 53 46 0 2844335 AACAAGGGGTTACGT ACGTAGCCCCTTTTT True CCAAATAAA CTTTGGTAG True True - AAAAAGGGGCTACGT TTTC ACGTAACCCCTTGTT TTTATTTGG 64 STM2693 intergenic 2844316 2844431 + down AAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTT TCAACTCCCGCCAGCTCCACCAAATAAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTTCAGAAACTCATGTGGCCTTGACCAC AACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGT 112 TTerm_0693 NC_003197.2 2844319 2844333 15 2844338 2844352 15 4 86 0 20 53 46 53 46 0 2844335 AACAAGGGGTTACGT ACGTAGCCCCTTTTT True CCAAATAAA CTTTGGTAG True True - AAAAAGGGGCTACGT TTTC ACGTAACCCCTTGTT TTTATTTGG 64 STM2694 intergenic 2844316 2844431 - down AACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTT GTGGTCAAGGCCACATGAGTTTCTGAACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTTATTTGGTGGAGCTGGCGGGAGTTGA AACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGT 112 TTerm_0694 NC_003197.2 2844406 2844412 7 2844420 2844426 7 7 100 0 14 28 71 28 71 0 2844415 AACCCGC GCGGGTT True CAACAAAAA CTGTTCAGA True False - AACCCGC TTTAATG GCGGGTT TTTTTGTTG 68 STM2693 intergenic 2844316 2844431 + down AAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTT TCAACTCCCGCCAGCTCCACCAAATAAAACAAGGGGTTACGTGAAAACGTAGCCCCTTTTTCTTTGGTAGTGGCGGCAAAATGGCGACAGCGTGTCGGACTGGCGGCAACAAAAAACCCGCCATTAAAGCGGGTTCTGTTCAGAAACTCATGTGGCCTTGACCAC AACAGAACCCGCTTTAATGGCGGGT 25 TTerm_0695 NC_003197.2 2844406 2844412 7 2844420 2844426 7 7 100 0 14 28 71 28 71 0 2844415 AACCCGC GCGGGTT True CAACAAAAA CTGTTCAGA True False - AACCCGC TTTAATG GCGGGTT TTTTTGTTG 68 STM2694 intergenic 2844316 2844431 - down AACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTT GTGGTCAAGGCCACATGAGTTTCTGAACAGAACCCGCTTTAATGGCGGGTTTTTTGTTGCCGCCAGTCCGACACGCTGTCGCCATTTTGCCGCCACTACCAAAGAAAAAGGGGCTACGTTTTCACGTAACCCCTTGTTTTATTTGGTGGAGCTGGCGGGAGTTGA AACAGAACCCGCTTTAATGGCGGGT 25 TTerm_0696 NC_003197.2 2878037 2878052 16 2878059 2878074 16 6 93 0 27 65 34 66 33 0 2878055 AAAAAAGCCTGTAACT AGTTGCAGGCTTTTTT True TGAACCTTA GTTGCATGT True True - AAAAAAGCCTGCAACT CATTGA AGTTACAGGCTTTTTT TAAGGTTCA 78 STM2739 intergenic 2877844 2878160 + down TTTATGGCGGCATTTTGGCGGCAGGGCACTAAAAACGCGTAAAACGGACGAACACTGAATAATATTAACCCGCTGTTTTTAAACGCAATACACTGTTTTTACTATACTAAAAATGGTATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAACATTCATTCATGATGCATCATGAACCTTAAAAAAGCCTGTAACTTCAATGAGTTGCAGGCTTTTTTGTTGCATGTGTGGTCATGATCTCTGTATGAATCTTGAGCTTTTGGCACCATGTTTAGCACCACGGTATCGTGGGGCTAAAAAAGCG TCACAACCTCAATTGGAAACGCTAATTTATGGCGGCATTTTGGCGGCAGGGCACTAAAAACGCGTAAAACGGACGAACACTGAATAATATTAACCCGCTGTTTTTAAACGCAATACACTGTTTTTACTATACTAAAAATGGTATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAACATTCATTCATGATGCATCATGAACCTTAAAAAAGCCTGTAACTTCAATGAGTTGCAGGCTTTTTTGTTGCATGTGTGGTCATGATCTCTGTATGAATCTTGAGCTTTTGGCACCATGTTTAGCACCACGGTATCGTGGGGCTAAAAAAGCGTGGTGCTAAAACATGCCTAACCAAC CGCTTTTTTAGCCCCACGATACCGTGGTGCTAAACATGGTGCCAAAAGCTCAAGATTCATACAGAGATCATGACCACACATGCAACAAAAAAGCCTGCAACTCATTGAAGTTACAGGCTTTTT 123 TTerm_0697 NC_003197.2 2888311 2888322 12 2888328 2888339 12 5 83 0 14 91 8 90 10 0 2888324 ATTAAATATAAC GTTTTATTAAAT True TCATTAAAA AAAAACACG True False - ATTTAATAAAAC AATGG GTTATATTTAAT TTTTAATGA 36 STM2747 intergenic 2888223 2888377 + down TAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTTTTCAGAAAAAAAACCACCTTCATTAAAATTAAATATAACCCATTGTTTTATTAAATAAAAACACGAGTGGATGAACAATCAATGCAAATAACCT CTTAATAGATAGCCATAATATTTAATAAATTACATTCAAAAAAAAATAGCGAAATACACCGTTTCAATACCGAAATGGTGTATTTTTCAGAAAAAAAACCACCTTCATTAAAATTAAATATAACCCATTGTTTTATTAAATAAAAACACGAGTGGATGAACAATCAATGCAAATAACCTCATATATTACCAGACAATATCAATG AGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAA 66 TTerm_0698 NC_003197.2 2888311 2888322 12 2888328 2888339 12 5 83 0 14 91 8 90 10 0 2888324 ATTAAATATAAC GTTTTATTAAAT True TCATTAAAA AAAAACACG True False - ATTTAATAAAAC AATGG GTTATATTTAAT TTTTAATGA 36 STM2748 intergenic 2888223 2888377 - down AGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAATTTTAATGAAGGTGGTTTTTTTTCTGAAAAATACACCATTTCGGTATTGAAACGGTGTATTTCGCTATTTTTTTTTGAATGTAATTTA CATTGATATTGTCTGGTAATATATGAGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAATTTTAATGAAGGTGGTTTTTTTTCTGAAAAATACACCATTTCGGTATTGAAACGGTGTATTTCGCTATTTTTTTTTGAATGTAATTTATTAAATATTATGGCTATCTATTAAG AGGTTATTTGCATTGATTGTTCATCCACTCGTGTTTTTATTTAATAAAACAATGGGTTATATTTAA 66 TTerm_0699 NC_003197.2 2913197 2913203 7 2913210 2913216 7 6 100 0 14 14 85 14 85 0 2913206 AGCCCCG CGGGGCT True AATGAAAAA GAATAAAAC True False - AGCCCCG TGAATT CGGGGCT TTTTTCATT 76 STM2771 intergenic 2913166 2913234 - down ATTTATTTCGTTTTATTCAGCCCCGTGAATTCGGGGCTTTTTCATTTAGCATAGATGAATATATATTT AGAACGTGCTGTCTCTGTTACGTTAATTTATTTCGTTTTATTCAGCCCCGTGAATTCGGGGCTTTTTCATTTAGCATAGATGAATATATATTTATGGAATGTATGGCTGTAAATGATA ATTTATTTCGTTTTATTCAGCCCCGTGAATTCGGGGC 37 TTerm_0700 NC_003197.2 2964519 2964528 10 2964533 2964542 10 4 100 0 20 60 40 60 40 0 2964530 AAAAGGGATC GATCCCTTTT True TATCTGATA TTAGTAGAC True True - AAAAGGGATC CGCA GATCCCTTTT TATCAGATA 72 STM2815 intergenic 2964509 2964558 + down CTATCTGATAAAAGGGATCTGCGGATCCCTTTTTTAGTAGACCAACAAT CGGCGGCGGTGGCGGCGCGCACTAACTATCTGATAAAAGGGATCTGCGGATCCCTTTTTTAGTAGACCAACAATCAGAAGAAATATTTGAATCTCAGAC ATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTT 39 TTerm_0701 NC_003197.2 2964519 2964528 10 2964533 2964542 10 4 100 0 20 60 40 60 40 0 2964530 AAAAGGGATC GATCCCTTTT True TATCTGATA TTAGTAGAC True True - AAAAGGGATC CGCA GATCCCTTTT TATCAGATA 72 STM2816 intergenic 2964509 2964558 - down ATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAG GTCTGAGATTCAAATATTTCTTCTGATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTTTATCAGATAGTTAGTGCGCGCCGCCACCGCCGCCG ATTGTTGGTCTACTAAAAAAGGGATCCGCAGATCCCTTT 39 TTerm_0702 NC_003197.2 2966219 2966226 8 2966234 2966241 8 7 100 0 16 25 75 25 75 0 2966229 AACCCCGG CCGGGGTT True CAATAAAAA AATTTAAAT True False - AACCCCGG TTTATGG CCGGGGTT TTTTTATTG 80 STM2817 intergenic 2965933 2966274 - down GTCTTATTTGTAAGCGGTTCCAGTATTTAAATTAACCCCGGTTTATGGCCGGGGTTTTTTATTGCTTAATATAATTTGCGTTTATTATATTTGCGGCGAGAATACATTTTAAATTAAGTAATGCCTGGCCTGTTAAATAATAAAATGTGATCTGGTAAACAGAAAAGGCGGATAACTCACGATGCCAGAGTGTATTGATCACATAAACTAAAAATCATAAATAATTAATAGAAAAACATAATGGAATGCGCCAGATATCCAGGTAATAACAAGACTCTACTAATAGCCGGTCGATGGGGTTTTTAGCAAATCTTATCTGGTATACATCAAACTTAAGGGAT AAAAACTGCAGGAACTGCATATTTAGTCTTATTTGTAAGCGGTTCCAGTATTTAAATTAACCCCGGTTTATGGCCGGGGTTTTTTATTGCTTAATATAATTTGCGTTTATTATATTTGCGGCGAGAATACATTTTAAATTAAGTAATGCCTGGCCTGTTAAATAATAAAATGTGATCTGGTAAACAGAAAAGGCGGATAACTCACGATGCCAGAGTGTATTGATCACATAAACTAAAAATCATAAATAATTAATAGAAAAACATAATGGAATGCGCCAGATATCCAGGTAATAACAAGACTCTACTAATAGCCGGTCGATGGGGTTTTTAGCAAATCTTATCTGGTATACATCAAACTTAAGGGATAAAAAATGAAGGCTAAATATTTAGC GTCTTATTTGTAAGCGGTTCCAGTATTTAAATTAACCCCGGTTTATGGCCGGGGT 55 TTerm_0703 NC_003197.2 2970808 2970820 13 2970829 2970841 13 8 76 0 11 65 34 70 30 0 2970824 AGTGTTTTATCAA TTGATGACACGCT True CCAAAAAGA GGCCGCCAA True False - AGCGTGTCATCAA ATTATCTG TTGATAAAACACT TCTTTTTGG 38 STM2826 intergenic 2970649 2970955 - down AGGTTTTCGCGTCTCACTTTTCGGGTGAGACGCAGCCTCTCTTCTCGCTCGCCCGCGTTGTCCCTTCATGACTTTTTTCAACCTCACTGTTGATATGGTGCGCTTTTGGCGGCCAGCGTGTCATCAAATTATCTGTTGATAAAACACTCTTTTTGGCTTTTTTACAGACTAATTGAGCGTGAAGTGTGCAAACGATAAAAGCTCTGGAAAAATTGTTTGACTTATAAGTCCCAGAAAGTAATATGTGCGCCACGCAGCGACGATGAGCAGAACAAGTTCTTCGAAGCACTCGTAAGAGGCGTGTGG AAAAATCCCAGCAGTCCAGTTACTAAGGTTTTCGCGTCTCACTTTTCGGGTGAGACGCAGCCTCTCTTCTCGCTCGCCCGCGTTGTCCCTTCATGACTTTTTTCAACCTCACTGTTGATATGGTGCGCTTTTGGCGGCCAGCGTGTCATCAAATTATCTGTTGATAAAACACTCTTTTTGGCTTTTTTACAGACTAATTGAGCGTGAAGTGTGCAAACGATAAAAGCTCTGGAAAAATTGTTTGACTTATAAGTCCCAGAAAGTAATATGTGCGCCACGCAGCGACGATGAGCAGAACAAGTTCTTCGAAGCACTCGTAAGAGGCGTGTGGTGAGGTGGCCGAGAGGCTGAAGGCG AGGTTTTCGCGTCTCACTTTTCGGGTGAGACGCAGCCTCTCTTCTCGCTCGCCCGCGTTGTCCCTTCATGACTTTTTTCAACCTCACTGTTGATATGGTGCGCTTTTGGCGGCCAGCGTGTCATCAAATTATCTGTTGATAAAACAC 147 TTerm_0704 NC_003197.2 3065453 3065470 18 3065475 3065492 18 4 94 0 31 58 41 58 41 0 3065472 GTAAAAAAAAGGCCAGTC GACTGGCCTTTTTTTGAC True GACAAACGG AAGGGTACT True True - GTCAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTTAC CCGTTTGTC 94 STM2923 intergenic 3065456 3065501 + down AAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGACAAGGGTACT GCTGCTGGCAGAAGACAAACGGTAAAAAAAAGGCCAGTCGACAGACTGGCCTTTTTTTGACAAGGGTACTTACTCGCGGAACAGCGCTTCGATAT AGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTTTTA 48 TTerm_0705 NC_003197.2 3065453 3065470 18 3065475 3065492 18 4 94 0 31 58 41 58 41 0 3065472 GTAAAAAAAAGGCCAGTC GACTGGCCTTTTTTTGAC True GACAAACGG AAGGGTACT True True - GTCAAAAAAAGGCCAGTC TGTC GACTGGCCTTTTTTTTAC CCGTTTGTC 94 STM2924 intergenic 3065456 3065501 - down AGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTT ATATCGAAGCGCTGTTCCGCGAGTAAGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTTTTACCGTTTGTCTTCTGCCAGCAGC AGTACCCTTGTCAAAAAAAGGCCAGTCTGTCGACTGGCCTTTTTTTTA 48 TTerm_0706 NC_003197.2 3088134 3088143 10 3088149 3088158 10 5 100 0 20 50 50 50 50 0 3088145 AAAATCCGGC GCCGGATTTT True ACCAATTTA TCATAGCAG True True - AAAATCCGGC AGGCA GCCGGATTTT TAAATTGGT 80 STM2945 intergenic 3088108 3088196 + down AGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTTTCATAGCAGCAAGTATAATCATACCGCGTAAGGACAAT CAGTCGTAATATATTACTGACATAAAGATAGTCAGTAATATAACCAATTTAAAATCCGGCTGCCTGCCGGATTTTTCATAGCAGCAAGTATAATCATACCGCGTAAGGACAATTACCCTTCATGCAGCCCGCACTCGC ATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTT 62 TTerm_0707 NC_003197.2 3088134 3088143 10 3088149 3088158 10 5 100 0 20 50 50 50 50 0 3088145 AAAATCCGGC GCCGGATTTT True ACCAATTTA TCATAGCAG True True - AAAATCCGGC AGGCA GCCGGATTTT TAAATTGGT 80 STM2946 intergenic 3088108 3088196 - down ATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTTTAAATTGGTTATATTACTGACTATCT GCGAGTGCGGGCTGCATGAAGGGTAATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTTTAAATTGGTTATATTACTGACTATCTTTATGTCAGTAATATATTACGACTG ATTGTCCTTACGCGGTATGATTATACTTGCTGCTATGAAAAATCCGGCAGGCAGCCGGATTT 62 TTerm_0708 NC_003197.2 3097327 3097334 8 3097339 3097346 8 4 100 0 16 37 62 37 62 0 3097336 AAACCCGC GCGGGTTT True ATACAAAAA ATACGTTAA True False - AAACCCGC TTCG GCGGGTTT TTTTTGTAT 72 STM2952 intergenic 3097244 3097371 - down ATCCTGCTTTTACCTCTTAACGTATAAACCCGCTTCGGCGGGTTTTTTTGTATCTGTTCAATAGCGCAGCCGCTGTGCATGACCGGGCAGACGAAATCTGCAATAATTAACGATTATCCCCTTAATA GTAAAGAGATCAAAGGCCAGGCGTAATCCTGCTTTTACCTCTTAACGTATAAACCCGCTTCGGCGGGTTTTTTTGTATCTGTTCAATAGCGCAGCCGCTGTGCATGACCGGGCAGACGAAATCTGCAATAATTAACGATTATCCCCTTAATAGAGAACGCTATGCAGTACCCGATTA ATCCTGCTTTTACCTCTTAACGTATAAACCCGCTTCGGCGGGTT 44 TTerm_0709 NC_003197.2 3102804 3102811 8 3102821 3102828 8 9 100 0 16 50 50 50 50 0 3102815 ACCCCATA TATGGGGT True AAAAACATA TGCTAATGC True False - ACCCCATA AGCATGAGA TATGGGGT TATGTTTTT 56 STM2956 intergenic 3102808 3102887 - down AACCCCAGACAGTAATCATGTAGCGGCTTTGCTACTCGTTCAGCAAAGCCGCATTAGCAACCCCATAAGCATGAGATAT ATGCACGGCGACTGCACGGGGGGTAAACCCCAGACAGTAATCATGTAGCGGCTTTGCTACTCGTTCAGCAAAGCCGCATTAGCAACCCCATAAGCATGAGATATGGGGTATGTTTTTGACGTACATTTC AACCCCAGACAGTAATCATGTAGCGGCTTTGCTACTCGTTCAGCAAAGCCGCATTAGCAACCCCATAAGCATGAGATATGGGG 83 TTerm_0710 NC_003197.2 3114938 3114947 10 3114957 3114966 10 9 90 0 15 45 55 44 55 0 3114951 GCCCGTAAAA TTTTGCGGGC True ATGAAAACG ATATGCACA True False - GCCCGCAAAA GCAGCAGTT TTTTACGGGC CGTTTTCAT 46 STM2963 intergenic 3114615 3115083 - down AGGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAGTGTAAAGTAACTGAATCGTGTTAGCTTTGTGCATATGCCCGCAAAAGCAGCAGTTTTTTACGGGCGTTTTCATGTAATCAAGCGACCTGTTTCACATTCTTCTCTTTTTACTCCTCCTGCGTCGACGCCGACGCCTTCTGATTTCATTTCCGTGAAGTGGCTTCCACTGTCCTGGGCTTTTGCCATAAACAGGCGTAATTCATCGCCAAAATACTGTGTTGTTGCACGGTGAGTGTGTGTGGCGCGCTTTTTATACTTCTCCTGCCAGTGAATAAAAGCATGCAGCGTGCAAAGCAAACGACCTAATAAAAGCTGCAACAAGGAAACGTTATCTCTGATTCCCTACCGGTTGTGCAGTTCAGAGTGAGCGTAGCTAACGCGAAATTT AAAACTGGGGAACTTTACTTTCCTGAGGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAGTGTAAAGTAACTGAATCGTGTTAGCTTTGTGCATATGCCCGCAAAAGCAGCAGTTTTTTACGGGCGTTTTCATGTAATCAAGCGACCTGTTTCACATTCTTCTCTTTTTACTCCTCCTGCGTCGACGCCGACGCCTTCTGATTTCATTTCCGTGAAGTGGCTTCCACTGTCCTGGGCTTTTGCCATAAACAGGCGTAATTCATCGCCAAAATACTGTGTTGTTGCACGGTGAGTGTGTGTGGCGCGCTTTTTATACTTCTCCTGCCAGTGAATAAAAGCATGCAGCGTGCAAAGCAAACGACCTAATAAAAGCTGCAACAAGGAAACGTTATCTCTGATTCCCTACCGGTTGTGCAGTTCAGAGTGAGCGTAGCTAACGCGAAATTTCAGGAGTGCAACAATGAGTTCATTA AGGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAGTGTAAAGTAACTGAATCGTGTTAGCTTTGTGCATATGCCCGCAAAAGCAGCAGTTTTTTACGGG 145 TTerm_0711 NC_003197.2 3115056 3115062 7 3115069 3115075 7 6 100 0 14 14 85 14 85 0 3115065 CCCTCCC GGGAGGG True AAAAGGTAC ATTTACCTC True False - CCCTCCC CCCTAC GGGAGGG GTACCTTTT 68 STM2963 intergenic 3114615 3115083 - down AGGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAGTGTAAAGTAACTGAATCGTGTTAGCTTTGTGCATATGCCCGCAAAAGCAGCAGTTTTTTACGGGCGTTTTCATGTAATCAAGCGACCTGTTTCACATTCTTCTCTTTTTACTCCTCCTGCGTCGACGCCGACGCCTTCTGATTTCATTTCCGTGAAGTGGCTTCCACTGTCCTGGGCTTTTGCCATAAACAGGCGTAATTCATCGCCAAAATACTGTGTTGTTGCACGGTGAGTGTGTGTGGCGCGCTTTTTATACTTCTCCTGCCAGTGAATAAAAGCATGCAGCGTGCAAAGCAAACGACCTAATAAAAGCTGCAACAAGGAAACGTTATCTCTGATTCCCTACCGGTTGTGCAGTTCAGAGTGAGCGTAGCTAACGCGAAATTT AAAACTGGGGAACTTTACTTTCCTGAGGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAGTGTAAAGTAACTGAATCGTGTTAGCTTTGTGCATATGCCCGCAAAAGCAGCAGTTTTTTACGGGCGTTTTCATGTAATCAAGCGACCTGTTTCACATTCTTCTCTTTTTACTCCTCCTGCGTCGACGCCGACGCCTTCTGATTTCATTTCCGTGAAGTGGCTTCCACTGTCCTGGGCTTTTGCCATAAACAGGCGTAATTCATCGCCAAAATACTGTGTTGTTGCACGGTGAGTGTGTGTGGCGCGCTTTTTATACTTCTCCTGCCAGTGAATAAAAGCATGCAGCGTGCAAAGCAAACGACCTAATAAAAGCTGCAACAAGGAAACGTTATCTCTGATTCCCTACCGGTTGTGCAGTTCAGAGTGAGCGTAGCTAACGCGAAATTTCAGGAGTGCAACAATGAGTTCATTA AGGTAAATCCCTCCCCCCTACGGGAGG 27 TTerm_0712 NC_003197.2 3139676 3139682 7 3139688 3139694 7 5 100 0 14 28 71 28 71 0 3139684 GGTGAGG CCTCACC True TAAAAAAAG CCTGCTCAC True False - GGTGAGG AATAA CCTCACC CTTTTTTTA 60 STM2988 intergenic 3139663 3139765 - down ATTGTGGTATTCTGCGACAACCGGATTGCCCGATAACGCGATCGCTATCGGGCCTGAAAATAGTGAGCAGGGGTGAGGAATAACCTCACCTTTTTTTATTCT GCGCCGGTAACGTGTTTAGCGGCTGATTGTGGTATTCTGCGACAACCGGATTGCCCGATAACGCGATCGCTATCGGGCCTGAAAATAGTGAGCAGGGGTGAGGAATAACCTCACCTTTTTTTATTCTGAGGTCATATGTCAGTGGTGATAAG ATTGTGGTATTCTGCGACAACCGGATTGCCCGATAACGCGATCGCTATCGGGCCTGAAAATAGTGAGCAGGGGTGAGGAATAACCTCAC 89 TTerm_0713 NC_003197.2 3157980 3157987 8 3157996 3158003 8 8 100 0 16 37 62 37 62 0 3157991 AACCGACG CGTCGGTT True GTAAAAAAA ATGGCAGGA True False - AACCGACG TCATCGCG CGTCGGTT TTTTTTTAC 72 STM3001 intergenic 3157838 3158023 - down AGCGCTGACGATCCTGCCATAACCGACGTCATCGCGCGTCGGTTTTTTTTACCCTTCGTCTCAATCTTCGGCGCGCATTCCTGAAATTTTGCAACGCGCTGCAAGACATGAACTTTTTTCCGTAACGCGCCGAACAATCTGTATTTGGCGCTCGTTATTTTTCTTCCGCCCGCCATACTGCCGAC GTATTAAAGCGCCGGTCGCTATCTAAGCGCTGACGATCCTGCCATAACCGACGTCATCGCGCGTCGGTTTTTTTTACCCTTCGTCTCAATCTTCGGCGCGCATTCCTGAAATTTTGCAACGCGCTGCAAGACATGAACTTTTTTCCGTAACGCGCCGAACAATCTGTATTTGGCGCTCGTTATTTTTCTTCCGCCCGCCATACTGCCGACATGAAAAAACAACAGGGCTATACGC AGCGCTGACGATCCTGCCATAACCGACGTCATCGCGCGTCGGT 43 TTerm_0714 NC_003197.2 3177497 3177506 10 3177513 3177522 10 6 90 0 15 55 45 55 44 0 3177509 AAAACCCTGT ACAGGGCTTT True ATCATAAAA ATCAGTTTT True True - AAAGCCCTGT CCTCGT ACAGGGTTTT TTTTATGAT 62 STM3017 intergenic 3177396 3177580 - down ATCCGCTACTGACAAATGCGTTTCTGGGAAAATCGACGCTTTGGCCGAAAAAACTGATAAAGCCCTGTCCTCGTACAGGGTTTTTTTATGATCTCATTAGCATAGTCCATATTGTGGGTTTAACTTAATCCATATATTGTTAAATAATAGCTATGATCAATGCTTTAATTCATTGAAATATTGG TAGATGGCGGTTGGCTGGCGCGTTAATCCGCTACTGACAAATGCGTTTCTGGGAAAATCGACGCTTTGGCCGAAAAAACTGATAAAGCCCTGTCCTCGTACAGGGTTTTTTTATGATCTCATTAGCATAGTCCATATTGTGGGTTTAACTTAATCCATATATTGTTAAATAATAGCTATGATCAATGCTTTAATTCATTGAAATATTGGTGGTTTAAAAAAATACCCGGCAACG ATCCGCTACTGACAAATGCGTTTCTGGGAAAATCGACGCTTTGGCCGAAAAAACTGATAAAGCCCTGTCCTCGTACAGGGTTT 83 TTerm_0715 NC_003197.2 3183761 3183776 16 3183783 3183798 16 6 87 0 22 59 40 57 42 0 3183779 TAAAAGATAGCCGGGA TCCCGGCTATTTTATA True GGCTAAAGT TAAGAATCC True True - TATAAAATAGCCGGGA GTTATA TCCCGGCTATCTTTTA ACTTTAGCC 84 STM3022 intergenic 3183758 3183789 + down AGTAAAAGATAGCCGGGATATAACTCCCGGC CGTATCGGTGATGTTTTTCGGCTAAAGTAAAAGATAGCCGGGATATAACTCCCGGCTATTTTATATAAGAATCCAGCACCT GCCGGGAGTTATATCCCGGCTATCTTTT 28 TTerm_0716 NC_003197.2 3183761 3183776 16 3183783 3183798 16 6 87 0 22 59 40 57 42 0 3183779 TAAAAGATAGCCGGGA TCCCGGCTATTTTATA True GGCTAAAGT TAAGAATCC True True - TATAAAATAGCCGGGA GTTATA TCCCGGCTATCTTTTA ACTTTAGCC 84 STM3023 intergenic 3183758 3183789 - down GCCGGGAGTTATATCCCGGCTATCTTTTACT AGGTGCTGGATTCTTATATAAAATAGCCGGGAGTTATATCCCGGCTATCTTTTACTTTAGCCGAAAAACATCACCGATACG GCCGGGAGTTATATCCCGGCTATCTTTT 28 TTerm_0717 NC_003197.2 3194932 3194939 8 3194945 3194952 8 5 100 0 16 37 62 37 62 0 3194941 GAAGGGAG CTCCCTTC True ACAAAAAAG GTAAACATG True False - GAAGGGAG TACCG CTCCCTTC CTTTTTTGT 64 STM3033 intergenic 3194788 3195162 - down ATTTCTGCATCAGATGTTATCCCCGGATTCAAACTCTTTTCCGGATTTAGTGGCACAGTCAATTTGGTTACCTGCTTAATGGTGGTTTGCATCACATTTTTAGCTGGTGGTATTTTTTTATGTTGACTGGAGATATCTGCCAACAGCATAACTTTTACGGCCAGATAATAAATAAAAGAGTACCAAAATGTCGTATTCTGACATGTTTACGAAGGGAGTACCGCTCCCTTCTTTTTTGTCTATGGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTAAGCCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG GTATCCGAATCGAAGACTGGTGCTAATTTCTGCATCAGATGTTATCCCCGGATTCAAACTCTTTTCCGGATTTAGTGGCACAGTCAATTTGGTTACCTGCTTAATGGTGGTTTGCATCACATTTTTAGCTGGTGGTATTTTTTTATGTTGACTGGAGATATCTGCCAACAGCATAACTTTTACGGCCAGATAATAAATAAAAGAGTACCAAAATGTCGTATTCTGACATGTTTACGAAGGGAGTACCGCTCCCTTCTTTTTTGTCTATGGAAAACCCCCAGCTAGGCTGGGGGTTCCGGAAAGCTTTCAGCTTTAAGCCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGGGTCCCAATGGGGGACGAAAAGAGCT ATTTCTGCATCAGATGTTATCCCCGGATTCAAACTCTTTTCCGGATTTAGTGGCACAGTCAATTTGGTTACCTGCTTAATGGTGGTTTGCATCACATTTTTAGCTGGTGGTATTTTTTTATGTTGACTGGAGATATCTGCCAACAGCATAACTTTTACGGCCAGATAATAAATAAAAGAGTACCAAAATGTCGTATTCTGACATGTTTACGAAGGGAGTACCGCTCCCTT 230 TTerm_0718 NC_003197.2 3212101 3212108 8 3212113 3212120 8 4 100 0 16 37 62 37 62 0 3212110 AAAGGCGC GCGCCTTT True CAAGCTGAA AGAAGACAG True False - AAAGGCGC TTCG GCGCCTTT TTCAGCTTG 72 STM3053 intergenic 3211694 3212143 - down ATTTACTGATTCGACTGTCTTCTAAAGGCGCTTCGGCGCCTTTTCAGCTTGTTAATAAAATGCGCTTTGTTTGTGTCGGATGCAGTGTGAGCGCCTTATTCAGGCTACAAAGTGTTACTAATTCAATATATTACAGTAAATCGTTGGCTCCTGTCAGGCAACCTGGCGTTTGTATCAGTGTATTAGCCAGAATTAAATTACCGGTTTTTTAGAGTCTAATGATTCATTGTGCATCATTTTTACCTTGCTGTTATTTAATAAAAATAACACGGTATATTTACATGTGGTTACAAATAGTTTCTCTCCGGAATCGTTATTTACCTCTCAATATAGTTACAAAAATTTCCGTATATTAAATTCATCAAGTTATTAATTTAAATTATAAATTAAAGATAAGCATAAATAACGTAAATATTTATTAACTTAGCACTTTGTTTTTTATACCTGGA GCGTACCGATTAGCGACTACCAGTAATTTACTGATTCGACTGTCTTCTAAAGGCGCTTCGGCGCCTTTTCAGCTTGTTAATAAAATGCGCTTTGTTTGTGTCGGATGCAGTGTGAGCGCCTTATTCAGGCTACAAAGTGTTACTAATTCAATATATTACAGTAAATCGTTGGCTCCTGTCAGGCAACCTGGCGTTTGTATCAGTGTATTAGCCAGAATTAAATTACCGGTTTTTTAGAGTCTAATGATTCATTGTGCATCATTTTTACCTTGCTGTTATTTAATAAAAATAACACGGTATATTTACATGTGGTTACAAATAGTTTCTCTCCGGAATCGTTATTTACCTCTCAATATAGTTACAAAAATTTCCGTATATTAAATTCATCAAGTTATTAATTTAAATTATAAATTAAAGATAAGCATAAATAACGTAAATATTTATTAACTTAGCACTTTGTTTTTTATACCTGGAGGGAATAATGAAACGATTTATATTT ATTTACTGATTCGACTGTCTTCTAAAGGCGCTTCGGCGCCTT 42 TTerm_0719 NC_003197.2 3226723 3226733 11 3226740 3226750 11 6 90 0 17 18 81 20 80 0 3226736 ACGCGGCCTGG CCAGGCCGGGT True GGGAGAAAA GAGATTACT True False - ACCCGGCCTGG GCGCTT CCAGGCCGCGT TTTTCTCCC 74 STM3064 intergenic 3226489 3226755 + down CCTCTCTATGAATGCCGGATGGCGGCGTGAACGTCTTATCCGGCCTGCATGACCCATTATTCCCTCGTCACTTCTTTGAAGTTCATCACAAAATCATTGCGTTCAGGCGGCAAAAAACGACGCGCCATTGGCTATTTTTTGCTGGCGACAAGGCGATTCAAAACGCTCACCGTATTAGCAAATCTTCATTTCAATGCGTAATACGGAGCAAAAAACGAGAACACCGGGAGAAAACGCGGCCTGGAAGCGCCCAGGCCGGGTGAGAT GCACAAGGTGCTGCGTCAGGATTAGCCTCTCTATGAATGCCGGATGGCGGCGTGAACGTCTTATCCGGCCTGCATGACCCATTATTCCCTCGTCACTTCTTTGAAGTTCATCACAAAATCATTGCGTTCAGGCGGCAAAAAACGACGCGCCATTGGCTATTTTTTGCTGGCGACAAGGCGATTCAAAACGCTCACCGTATTAGCAAATCTTCATTTCAATGCGTAATACGGAGCAAAAAACGAGAACACCGGGAGAAAACGCGGCCTGGAAGCGCCCAGGCCGGGTGAGATTACTGCGTGCTGGCGGCCGTTGTCG ATCTCACCCGGCCTGGGCGCTTCCAGGCCGCG 32 TTerm_0720 NC_003197.2 3226723 3226733 11 3226740 3226750 11 6 90 0 17 18 81 20 80 0 3226736 ACGCGGCCTGG CCAGGCCGGGT True GGGAGAAAA GAGATTACT True False - ACCCGGCCTGG GCGCTT CCAGGCCGCGT TTTTCTCCC 74 STM3065 intergenic 3226489 3226755 - down ATCTCACCCGGCCTGGGCGCTTCCAGGCCGCGTTTTCTCCCGGTGTTCTCGTTTTTTGCTCCGTATTACGCATTGAAATGAAGATTTGCTAATACGGTGAGCGTTTTGAATCGCCTTGTCGCCAGCAAAAAATAGCCAATGGCGCGTCGTTTTTTGCCGCCTGAACGCAATGATTTTGTGATGAACTTCAAAGAAGTGACGAGGGAATAATGGGTCATGCAGGCCGGATAAGACGTTCACGCCGCCATCCGGCATTCATAGAGAGG CGACAACGGCCGCCAGCACGCAGTAATCTCACCCGGCCTGGGCGCTTCCAGGCCGCGTTTTCTCCCGGTGTTCTCGTTTTTTGCTCCGTATTACGCATTGAAATGAAGATTTGCTAATACGGTGAGCGTTTTGAATCGCCTTGTCGCCAGCAAAAAATAGCCAATGGCGCGTCGTTTTTTGCCGCCTGAACGCAATGATTTTGTGATGAACTTCAAAGAAGTGACGAGGGAATAATGGGTCATGCAGGCCGGATAAGACGTTCACGCCGCCATCCGGCATTCATAGAGAGGCTAATCCTGACGCAGCACCTTGTGC ATCTCACCCGGCCTGGGCGCTTCCAGGCCGCG 32 TTerm_0721 NC_003197.2 3236356 3236367 12 3236372 3236383 12 4 100 0 24 41 58 41 58 0 3236369 AAAACGGGTCGC GCGACCCGTTTT True GAGAATAAA ATGCCGTAT True True - AAAACGGGTCGC TTCG GCGACCCGTTTT TTTATTCTC 88 STM3075 intergenic 3236355 3236399 + down AAAACGGGTCGCCGAAGCGACCCGTTTTATGCCGTATTAAGGAT CGGCAGGTTGTCAAAGGGAGAATAAAAAACGGGTCGCCGAAGCGACCCGTTTTATGCCGTATTAAGGATTACAGCAGTGCTTTCGCTTTGGCGA ATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTT 43 TTerm_0722 NC_003197.2 3236356 3236367 12 3236372 3236383 12 4 100 0 24 41 58 41 58 0 3236369 AAAACGGGTCGC GCGACCCGTTTT True GAGAATAAA ATGCCGTAT True True - AAAACGGGTCGC TTCG GCGACCCGTTTT TTTATTCTC 88 STM3076 intergenic 3236355 3236399 - down ATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTTT TCGCCAAAGCGAAAGCACTGCTGTAATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTTTTTATTCTCCCTTTGACAACCTGCCG ATCCTTAATACGGCATAAAACGGGTCGCTTCGGCGACCCGTTT 43 TTerm_0723 NC_003197.2 3240476 3240491 16 3240499 3240514 16 7 87 0 22 37 62 35 64 0 3240494 AAACCCTCCCGCGTCG CGACGAGGAAGGGTTT True ATATAAAAA GAATTTGTT True False - AAACCCTTCCTCGTCG GGCCTAA CGACGCGGGAGGGTTT TTTTTATAT 76 STM3079 intergenic 3240457 3240650 - down ACTGACCGCGATGGACGTATGAGCCTACTGATTTGCGCTGGATATATATTTTTTTCGGGCGTTGTCTACTGTACCTGGCTAAACTGACTTCAATAATGCGGTCTGTCAGAGTAAACTTTGAGCCGTAAACAAATTCAAACCCTTCCTCGTCGGGCCTAACGACGCGGGAGGGTTTTTTTATATTGACTAAGAA AGCGGCAAATCCCTAAGGCCTCTTAACTGACCGCGATGGACGTATGAGCCTACTGATTTGCGCTGGATATATATTTTTTTCGGGCGTTGTCTACTGTACCTGGCTAAACTGACTTCAATAATGCGGTCTGTCAGAGTAAACTTTGAGCCGTAAACAAATTCAAACCCTTCCTCGTCGGGCCTAACGACGCGGGAGGGTTTTTTTATATTGACTAAGAAGAGGTTTTTGCCATGAGCACCTTAG ACTGACCGCGATGGACGTATGAGCCTACTGATTTGCGCTGGATATATATTTTTTTCGGGCGTTGTCTACTGTACCTGGCTAAACTGACTTCAATAATGCGGTCTGTCAGAGTAAACTTTGAGCCGTAAACAAATTCAAACCCTTCCTCGTCGGGCCTAACGACGCGGGAGGGTT 174 TTerm_0724 NC_003197.2 3248886 3248897 12 3248902 3248913 12 4 100 0 24 58 41 58 41 0 3248899 GGGTCGATTTAA TTAAATCGACCC True ATATAAAAG ACAAGTGGA True False - GGGTCGATTTAA TTAT TTAAATCGACCC CTTTTATAT 48 STM3086 intergenic 3248795 3248933 - down ATTAAGAGTATTCCACTTGTGGGTCGATTTAATTATTTAAATCGACCCTTTTATATTTTATAAATTCTTAATTATCAGCGCGTCGCTTCTCTATGTAATCTTATGGGCCTACAATCCCCCTAATAATTAAAAAGGGGT GTTATACTTATCTTGAAGATGAGTAATTAAGAGTATTCCACTTGTGGGTCGATTTAATTATTTAAATCGACCCTTTTATATTTTATAAATTCTTAATTATCAGCGCGTCGCTTCTCTATGTAATCTTATGGGCCTACAATCCCCCTAATAATTAAAAAGGGGTGTGAGTATGAGCAAATTTAAATTTA ATTAAGAGTATTCCACTTGTGGGTCGATTTAATTATTTAAATCGACC 47 TTerm_0725 NC_003197.2 3357808 3357821 14 3357826 3357839 14 4 100 0 28 64 35 64 35 0 3357823 AAAAAAGCCGATGA TCATCGGCTTTTTT True AGGAATACA CAACCATGA True True - AAAAAAGCCGATGA GATG TCATCGGCTTTTTT TGTATTCCT 80 STM3194 intergenic 3357687 3357858 + down CCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGAT ATTGAAACTGGCCAGAGGCAAATAACCTGAATAGATAAACCAAAGCAGAGGTCTGCATTCAGGCCTCTGCTTTTCTCACAATAATTTTACCATTCAGCTTATTCGTCGTTCTTTGAAACTGAACGATATGGCACCGAAGGAATACAAAAAAGCCGATGACATCTCATCGGCTTTTTTCAACCATGATCCGTTCGATCAGCTGGCTTTGCGCTCATGCGCCT ATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTT 50 TTerm_0726 NC_003197.2 3357808 3357821 14 3357826 3357839 14 4 100 0 28 64 35 64 35 0 3357823 AAAAAAGCCGATGA TCATCGGCTTTTTT True AGGAATACA CAACCATGA True True - AAAAAAGCCGATGA GATG TCATCGGCTTTTTT TGTATTCCT 80 STM3195 intergenic 3357687 3357858 - down ATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGG AGGCGCATGAGCGCAAAGCCAGCTGATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTTTGTATTCCTTCGGTGCCATATCGTTCAGTTTCAAAGAACGACGAATAAGCTGAATGGTAAAATTATTGTGAGAAAAGCAGAGGCCTGAATGCAGACCTCTGCTTTGGTTTATCTATTCAGGTTATTTGCCTCTGGCCAGTTTCAAT ATCGAACGGATCATGGTTGAAAAAAGCCGATGAGATGTCATCGGCTTTTT 50 TTerm_0727 NC_003197.2 3359253 3359262 10 3359267 3359276 10 4 90 0 15 25 75 22 77 0 3359264 TGAACGGGCC GGCCCGCTCA True TAAAAACGT TATAAGATC True False - TGAGCGGGCC GTCA GGCCCGTTCA ACGTTTTTA 78 STM3196 intergenic 3359247 3359321 + down AAACGTGAACGGGCCTGACGGCCCGCTCATATAAGATCTGAATAATGCCCTGCACCTGTAAAGGGAGCCTGCAT GCCAGTCGATCCACAACAAGAGTAAAAACGTGAACGGGCCTGACGGCCCGCTCATATAAGATCTGAATAATGCCCTGCACCTGTAAAGGGAGCCTGCATTAGTGTTCTAATTCTAACCTTTTCG ATGCAGGCTCCCTTTACAGGTGCAGGGCATTATTCAGATCTTATATGAGCGGGCCGTCAGGCCCGTTC 68 TTerm_0728 NC_003197.2 3359253 3359262 10 3359267 3359276 10 4 90 0 15 25 75 22 77 0 3359264 TGAACGGGCC GGCCCGCTCA True TAAAAACGT TATAAGATC True False - TGAGCGGGCC GTCA GGCCCGTTCA ACGTTTTTA 78 STM3197 intergenic 3359247 3359321 - down ATGCAGGCTCCCTTTACAGGTGCAGGGCATTATTCAGATCTTATATGAGCGGGCCGTCAGGCCCGTTCACGTTT CGAAAAGGTTAGAATTAGAACACTAATGCAGGCTCCCTTTACAGGTGCAGGGCATTATTCAGATCTTATATGAGCGGGCCGTCAGGCCCGTTCACGTTTTTACTCTTGTTGTGGATCGACTGGC ATGCAGGCTCCCTTTACAGGTGCAGGGCATTATTCAGATCTTATATGAGCGGGCCGTCAGGCCCGTTC 68 TTerm_0729 NC_003197.2 3371470 3371481 12 3371486 3371497 12 4 83 0 14 100 0 100 0 0 3371483 AAAAAATATAAA TTTATTTTTATT True TTTGGTTTA TCAGATTAT True False - AATAAAAATAAA TAAT TTTATATTTTTT TAAACCAAA 28 STM3206 intergenic 3371408 3371493 - down AAAATAAATAATTTTATATTTTTTAAACCAAACGGTTATATATGGGGTCTTAACGCGAGATCCATTTTTGCAGTGTTTTTCATTT TTGAGCGTGGCAATAATCTGAAATAAAAATAAATAATTTTATATTTTTTAAACCAAACGGTTATATATGGGGTCTTAACGCGAGATCCATTTTTGCAGTGTTTTTCATTTTAGGGGTTTATTGATGAGCGATATG AAAATAAATAATTTTATATTTTT 23 TTerm_0730 NC_003197.2 3392223 3392241 19 3392246 3392264 19 4 84 0 23 55 44 56 43 0 3392243 AAAAGCAACGGCTAATGCC GGCGTTAGCCGTTTTTTTT True CTATGCATA TTTTGCATA True True - AAAAAAAACGGCTAACGCC GAAT GGCATTAGCCGTTGCTTTT TATGCATAG 78 STM3223 intergenic 3392011 3392272 + down AATTATGTAAATCATATGTTACAGGTCATTGACTCTACGCGTGGCCTGTCATACTTTGTTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCAAGGTCTATGCATAAAAGCAACGGCTAATGCCATTCGGCGTTAGCCGTTTTTTTTTTTTGCAT TCTGACCCATCCCCTTACTGCGTAAAATTATGTAAATCATATGTTACAGGTCATTGACTCTACGCGTGGCCTGTCATACTTTGTTACGCGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGCAAAACCACATCCGGTCACCGGGCAGCCATAAAGGAATGCGTCAGCGTATTCCTTTATTGTTGTAAGTGAGACCTTGCCGAATGGCAAGGTCTATGCATAAAAGCAACGGCTAATGCCATTCGGCGTTAGCCGTTTTTTTTTTTTGCATAGGGAGAAATAATGAATACTGTTGG ATGCAAAAAAAAAAAACGGCTAACGCCGAATGGCATTAGCCGTTGCTTT 49 TTerm_0731 NC_003197.2 3393280 3393295 16 3393303 3393318 16 7 100 0 32 43 56 43 56 0 3393298 CAAAAACGCCCGACAG CTGTCGGGCGTTTTTG True TGCCCCGTC TTTAACATG True True - CAAAAACGCCCGACAG GTGTGCG CTGTCGGGCGTTTTTG GACGGGGCA 96 STM3224 intergenic 3393252 3393495 + down TCTTTTATCGGGGTAAACCTGCCCCGTCAAAAACGCCCGACAGCGCACACCTGTCGGGCGTTTTTGTTTAACATGTCACAATACTGTTAATATAAAGTTATAAAACATGATCACAGCAAAAAATCCAGGATATTTCGCTTCCCGAACCTTCAACTTTCCTTATACTCAACCAGGCAAACACTTTGTTACATCCTGAAAGATGCGCCGTAAGAGCGTGCAGGGGATGACCAGCAACACAATACA CGATAAGAAACTACGAGCGCAATAATCTTTTATCGGGGTAAACCTGCCCCGTCAAAAACGCCCGACAGCGCACACCTGTCGGGCGTTTTTGTTTAACATGTCACAATACTGTTAATATAAAGTTATAAAACATGATCACAGCAAAAAATCCAGGATATTTCGCTTCCCGAACCTTCAACTTTCCTTATACTCAACCAGGCAAACACTTTGTTACATCCTGAAAGATGCGCCGTAAGAGCGTGCAGGGGATGACCAGCAACACAATACAAGGAATATGAAATGGCTACGCAACG TGTATTGTGTTGCTGGTCATCCCCTGCACGCTCTTACGGCGCATCTTTCAGGATGTAACAAAGTGTTTGCCTGGTTGAGTATAAGGAAAGTTGAAGGTTCGGGAAGCGAAATATCCTGGATTTTTTGCTGTGATCATGTTTTATAACTTTATATTAACAGTATTGTGACATGTTAAACAAAAACGCCCGACAGGTGTGCGCTGTCGGGCGTTTTT 215 TTerm_0732 NC_003197.2 3398457 3398466 10 3398475 3398484 10 8 100 0 20 50 50 50 50 0 3398470 AAAAGCGAGG CCTCGCTTTT True TCAATTAAA GTCATCTGA True True - AAAAGCGAGG CGCTATTC CCTCGCTTTT TTTAATTGA 80 STM3232 intergenic 3398437 3398493 + down GCAATCTATACTCAATTAAAAAAGCGAGGGAATAGCGCCTCGCTTTTGTCATCTGA CCGTCTGCTGAATAAAAAGTGGTAAGCAATCTATACTCAATTAAAAAAGCGAGGGAATAGCGCCTCGCTTTTGTCATCTGAAGGAGAGAGACATGGGACAACTGAT TCAGATGACAAAAGCGAGGCGCTATTCCCTCGCTTT 36 TTerm_0733 NC_003197.2 3404921 3404932 12 3404937 3404948 12 4 100 0 24 41 58 41 58 0 3404934 AAAAGGGCGCAC GTGCGCCCTTTT True CACAACAAA CTCAACTTC True True - AAAAGGGCGCAC CAAA GTGCGCCCTTTT TTTGTTGTG 88 STM3240 intergenic 3404698 3405005 - down GACCCGACAGGCGCAGAGTGAGCAGGCTATGGGATAACGTAGAAGACAGAAGTTGAGAAAAGGGCGCACCAAAGTGCGCCCTTTTTTGTTGTGATACGCGTCAAATAGAGAAAATAACAACATTAAACCAATAGTAAATAGAAAAGAATTCTTAACCCACAAGAAATGCAGGCGTTTTATTGGTAAGTTTTTCTCTTATCGTGCGCGTATGATTTTCTTATTACAAGAAAGTACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAACCTCTACCTACACATTGAGC TGGCGATTAAAGTCGTTTGTGGATAGACCCGACAGGCGCAGAGTGAGCAGGCTATGGGATAACGTAGAAGACAGAAGTTGAGAAAAGGGCGCACCAAAGTGCGCCCTTTTTTGTTGTGATACGCGTCAAATAGAGAAAATAACAACATTAAACCAATAGTAAATAGAAAAGAATTCTTAACCCACAAGAAATGCAGGCGTTTTATTGGTAAGTTTTTCTCTTATCGTGCGCGTATGATTTTCTTATTACAAGAAAGTACCTGCACCTCACGTTCTGCATATCGCCTTGCTGCGGCACGAAAAATAAAAAAAACCTCTACCTACACATTGAGCGAGAATTTTATGGAATCGGCAAGTA GACCCGACAGGCGCAGAGTGAGCAGGCTATGGGATAACGTAGAAGACAGAAGTTGAGAAAAGGGCGCACCAAAGTGCGCCCTTT 84 TTerm_0734 NC_003197.2 3420270 3420279 10 3420286 3420295 10 6 100 0 20 60 40 60 40 0 3420282 AAAACATGGC GCCATGTTTT True CGCCTCGCA CATATGTTT True True - AAAACATGGC CCTTAA GCCATGTTTT TGCGAGGCG 72 STM3250 intergenic 3420247 3420487 + down TCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACT GTTTAACCCCGCACCTGTGACCTGATCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACTTAATTCTGCTGCCTCATCAATTCTT AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTT 217 TTerm_0735 NC_003197.2 3420270 3420279 10 3420286 3420295 10 6 100 0 20 60 40 60 40 0 3420282 AAAACATGGC GCCATGTTTT True CGCCTCGCA CATATGTTT True True - AAAACATGGC CCTTAA GCCATGTTTT TGCGAGGCG 72 STM3251 intergenic 3420247 3420487 - down AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGA AAGAATTGATGAGGCAGCAGAATTAAGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGATCAGGTCACAGGTGCGGGGTTAAAC AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTT 217 TTerm_0736 NC_003197.2 3420365 3420372 8 3420377 3420384 8 4 87 0 11 87 12 85 14 0 3420374 TTCAAATT AAATTGAA True TAAAACCAT ATTCTATGC True False - TTCAATTT ATTG AATTTGAA ATGGTTTTA 30 STM3250 intergenic 3420247 3420487 + down TCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACT GTTTAACCCCGCACCTGTGACCTGATCTATTCTGGAAAGCGCCTCGCAAAACATGGCTTAAGGGCCATGTTTTCATATGTTTGATAAACTGCGCCATGTTCATACCGGATATGGCAAAAACACCTAACCCACCATAAAACCATTCAAATTCAATAAATTGAAATTCTATGCCAAGCGCAACCTTACGTTTCTCACTAATTTGAGTCGCAGCACATGCAATTTGAGGTATGTCGAATATAACGACAGCCTATTAATCACCTTTACTTAATTCTGCTGCCTCATCAATTCTT AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGA 122 TTerm_0737 NC_003197.2 3420365 3420372 8 3420377 3420384 8 4 87 0 11 87 12 85 14 0 3420374 TTCAAATT AAATTGAA True TAAAACCAT ATTCTATGC True False - TTCAATTT ATTG AATTTGAA ATGGTTTTA 30 STM3251 intergenic 3420247 3420487 - down AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGA AAGAATTGATGAGGCAGCAGAATTAAGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGAATGGTTTTATGGTGGGTTAGGTGTTTTTGCCATATCCGGTATGAACATGGCGCAGTTTATCAAACATATGAAAACATGGCCCTTAAGCCATGTTTTGCGAGGCGCTTTCCAGAATAGATCAGGTCACAGGTGCGGGGTTAAAC AGTAAAGGTGATTAATAGGCTGTCGTTATATTCGACATACCTCAAATTGCATGTGCTGCGACTCAAATTAGTGAGAAACGTAAGGTTGCGCTTGGCATAGAATTTCAATTTATTGAATTTGA 122 TTerm_0738 NC_003197.2 3451585 3451597 13 3451603 3451615 13 5 84 0 16 38 61 36 63 0 3451599 GAAAAAAGGGGCC GGCCCCCTCTTTC True ATCTGCTGG TGAAACTCG True False - GAAAGAGGGGGCC TTCAT GGCCCCTTTTTTC CCAGCAGAT 80 STM3283 intergenic 3451401 3451631 - down ATTCTTTCGAGTTTCAGAAAGAGGGGGCCTTCATGGCCCCTTTTTTCCAGCAGATGGCAGCAATTCGCTGGAAACTAATGTATTGTTGCTATGAATGATCTTCCGTTGCAGAGGTTCGCGCGGCTAATGAGAGGCTTTACCCATATCAGGGTTAGGGTTGTCATTAGTCGCGAGGATGCGCAGAAGATCGGGTATTAACGACGGCGCGTATTATGCCGTCAAAAATTGGA TTGAGCGTCTGGGTCTGCGTCGCTAATTCTTTCGAGTTTCAGAAAGAGGGGGCCTTCATGGCCCCTTTTTTCCAGCAGATGGCAGCAATTCGCTGGAAACTAATGTATTGTTGCTATGAATGATCTTCCGTTGCAGAGGTTCGCGCGGCTAATGAGAGGCTTTACCCATATCAGGGTTAGGGTTGTCATTAGTCGCGAGGATGCGCAGAAGATCGGGTATTAACGACGGCGCGTATTATGCCGTCAAAAATTGGAAAGGATATTATTTTGCTTAATCCGA ATTCTTTCGAGTTTCAGAAAGAGGGGGCCTTCATGGCCCCTTTTTT 46 TTerm_0739 NC_003197.2 3453421 3453430 10 3453436 3453445 10 5 100 0 20 50 50 50 50 0 3453432 AAAAAGGGGC GCCCCTTTTT True TAAAGACAA AAATTTCTT True True - AAAAAGGGGC TTATG GCCCCTTTTT TTGTCTTTA 80 STM3286 intergenic 3453410 3453617 - down ATCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGTTATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAGATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTTATGGCCCCTTTTTTGTCTTTATT TCGAGATCCAACGTACCATCGCTTAATCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGTTATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAGATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTTATGGCCCCTTTTTTGTCTTTATTCTGGAGAATTTATTATGGCGAAAGA ATCTTCGTCGTCTTTTGGGCCGCAACGGCGTTGGCTGCGCTCGCTCACCCCGGTCACATAGTTATCTATGCTCCCGGGGATTTACGAGCTTGCCGCCTTGTTGCAATCCAAAATCCTTAGAAGATGATTAGGCGTAGGCCGGGTAAGCGAAGCGCCACCCGGCAAGAAATTTAAAAAGGGGCTTATGGCCCCTTTT 196 TTerm_0740 NC_003197.2 3461721 3461733 13 3461738 3461750 13 4 92 0 21 65 34 66 33 0 3461735 AAAAAAAGACGCT AGCGTCTTTCTTT True ACAGACGAA CGGAATATT True False - AAAGAAAGACGCT GAAA AGCGTCTTTTTTT TTCGTCTGT 74 STM3292 intergenic 3461430 3461762 - down ACCAATATTCCGAAAGAAAGACGCTGAAAAGCGTCTTTTTTTTCGTCTGTTGAAACTGCTCTCAGAGAGGAGGTTGAAGCACGCTTACACGCGTCCCTGGCATGGCCCCGTCAATACGTTGAGATAGCCCTACATACATACTCATGTATGTCCTCTCTGGTGATCTCCCTGCGTCAGGTTCACTCCACCGATTACGAGATCATCTTCGTTCATTGAAGCCAGTAGTTGCTCAGCTATAATCTGAAATGCTTGTATCTGTTATCCCCCTCCATATCTTTTGCTCAAGTAGTTTTATCTAATCTTCCTTTGCACTGAGCCGAATATCTAAGGAA TACGGGTTCAAGTCCCGTCCTCGGTACCAATATTCCGAAAGAAAGACGCTGAAAAGCGTCTTTTTTTTCGTCTGTTGAAACTGCTCTCAGAGAGGAGGTTGAAGCACGCTTACACGCGTCCCTGGCATGGCCCCGTCAATACGTTGAGATAGCCCTACATACATACTCATGTATGTCCTCTCTGGTGATCTCCCTGCGTCAGGTTCACTCCACCGATTACGAGATCATCTTCGTTCATTGAAGCCAGTAGTTGCTCAGCTATAATCTGAAATGCTTGTATCTGTTATCCCCCTCCATATCTTTTGCTCAAGTAGTTTTATCTAATCTTCCTTTGCACTGAGCCGAATATCTAAGGAAGAGATTAATGAGTTTATTTTTCGAT ACCAATATTCCGAAAGAAAGACGCTGAAAAGCGTCTTTTTT 41 TTerm_0741 NC_003197.2 3462350 3462355 6 3462364 3462369 6 8 100 0 12 66 33 66 33 0 3462359 GCAAAA TTTTGC True AAAAAACAG GGGCCGTAA True False - GCAAAA AACAACGC TTTTGC CTGTTTTTT 40 STM3294 intergenic 3462207 3462414 - down AGCGTTTAAGTGACTAAAAAGGCGGCGGTTGCCGCCTTACGGCCCGCAAAAAACAACGCTTTTGCTGTTTTTTTCCGCAGTTGATACAATGCGCTTAAATTGCCCTTGCGAAGGTCATTCGCTTTGGTTAGTATTCACACCCGCTTCAGTGGGAAACAGTAAAAATCCCGCTTTATTGGTAGAAGCATTGGTACGCGGCAACTCCGC TCGCGGATGCGGTAAAAGCCGTTTAAGCGTTTAAGTGACTAAAAAGGCGGCGGTTGCCGCCTTACGGCCCGCAAAAAACAACGCTTTTGCTGTTTTTTTCCGCAGTTGATACAATGCGCTTAAATTGCCCTTGCGAAGGTCATTCGCTTTGGTTAGTATTCACACCCGCTTCAGTGGGAAACAGTAAAAATCCCGCTTTATTGGTAGAAGCATTGGTACGCGGCAACTCCGCAAGGAACAGGTTGATTATGTACGAA AGCGTTTAAGTGACTAAAAAGGCGGCGGTTGCCGCCTTACGGCCCGCAAAAAACAACGCTTTTG 64 TTerm_0742 NC_003197.2 3464689 3464694 6 3464699 3464704 6 4 100 0 12 83 16 83 16 0 3464696 ACAAAT ATTTGT True GTTGTAAAA CGCCCAGCT True False - ACAAAT AAGC ATTTGT TTTTACAAC 32 STM3296 intergenic 3464606 3464697 - down AGCATTTGTTTTACAACATTATGTTTAGCGCTCACCGAAACCCTGGGGCTTGCCCCGGGGTTTTTCTTTTTTTAACTCACCATAAATAAAA TGTCAGAGCAGCTGGGCGACAAATAAGCATTTGTTTTACAACATTATGTTTAGCGCTCACCGAAACCCTGGGGCTTGCCCCGGGGTTTTTCTTTTTTTAACTCACCATAAATAAAACAGGGATTTTGACCATGAAACTCTT AGCATTTG 8 TTerm_0743 NC_003197.2 3467810 3467818 9 3467824 3467832 9 5 88 0 13 61 38 62 37 0 3467820 GTGTAAAAC GTTTTCCAC True CAAAATCTG GAGCAGGAG True False - GTGGAAAAC CCCTC GTTTTACAC CAGATTTTG 42 STM3298 intergenic 3467781 3467937 + down GGATATCCTAAAGTCGAACACAAAATCTGTGTAAAACGAGGGGTTTTCCACGAGCAGGAGAGCAAAATGCCACGCTCTCTCCGTTGATAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACACCAACAATTTGCGTATTGAGTACTGCT GCGTAAAATCTCGCTGCCGCGTTAAGGATATCCTAAAGTCGAACACAAAATCTGTGTAAAACGAGGGGTTTTCCACGAGCAGGAGAGCAAAATGCCACGCTCTCTCCGTTGATAAAAGGCCGCTATGCGGCCTTTTTCCTTTCTTTACAATACACCAACAATTTGCGTATTGAGTACTGCTTAAAGGTATTCCACTTTAAGCACTT AGCAGTACTCAATACGCAAATTGTTGGTGTATTGTAAAGAAAGGAAAAAGGCCGCATAGCGGCCTTTTATCAACGGAGAGAGCGTGGCATTTTGCTCTCCTGCTCGTGGAAAACCCCTCGTTTTACA 127 TTerm_0744 NC_003197.2 3467810 3467818 9 3467824 3467832 9 5 88 0 13 61 38 62 37 0 3467820 GTGTAAAAC GTTTTCCAC True CAAAATCTG GAGCAGGAG True False - GTGGAAAAC CCCTC GTTTTACAC CAGATTTTG 42 STM3299 intergenic 3467781 3467937 - down AGCAGTACTCAATACGCAAATTGTTGGTGTATTGTAAAGAAAGGAAAAAGGCCGCATAGCGGCCTTTTATCAACGGAGAGAGCGTGGCATTTTGCTCTCCTGCTCGTGGAAAACCCCTCGTTTTACACAGATTTTGTGTTCGACTTTAGGATATCC AAGTGCTTAAAGTGGAATACCTTTAAGCAGTACTCAATACGCAAATTGTTGGTGTATTGTAAAGAAAGGAAAAAGGCCGCATAGCGGCCTTTTATCAACGGAGAGAGCGTGGCATTTTGCTCTCCTGCTCGTGGAAAACCCCTCGTTTTACACAGATTTTGTGTTCGACTTTAGGATATCCTTAACGCGGCAGCGAGATTTTACGC AGCAGTACTCAATACGCAAATTGTTGGTGTATTGTAAAGAAAGGAAAAAGGCCGCATAGCGGCCTTTTATCAACGGAGAGAGCGTGGCATTTTGCTCTCCTGCTCGTGGAAAACCCCTCGTTTTACA 127 TTerm_0745 NC_003197.2 3472456 3472466 11 3472472 3472482 11 5 100 0 22 36 63 36 63 0 3472468 AAAGCCCCGCA TGCGGGGCTTT True GAATGTAAA CATCCGTTA True False - AAAGCCCCGCA CCTGT TGCGGGGCTTT TTTACATTC 84 STM3303 intergenic 3472378 3472508 - down AGTTTTTTGTGGTCCGGTAACGGATGAAAGCCCCGCACCTGTTGCGGGGCTTTTTACATTCGATGGCCGACTAAAATATACCCGTGTGGCTGTGCGAATGCCGTTAACGGGTCTTTGCAGGGAACACGGC AATACATCAGCATCGTTGCTGAGTAAGTTTTTTGTGGTCCGGTAACGGATGAAAGCCCCGCACCTGTTGCGGGGCTTTTTACATTCGATGGCCGACTAAAATATACCCGTGTGGCTGTGCGAATGCCGTTAACGGGTCTTTGCAGGGAACACGGCATGAAGCAGCAGGCAGGCATTGGCA AGTTTTTTGTGGTCCGGTAACGGATGAAAGCCCCGCACCTGTTGCGGGGCTT 52 TTerm_0746 NC_003197.2 3474855 3474866 12 3474876 3474887 12 9 100 0 24 33 66 33 66 0 3474870 AACAACCCCCGC GCGGGGGTTGTT True GCCTGTAAA CAGCGTACA True False - AACAACCCCCGC GAACGCGAT GCGGGGGTTGTT TTTACAGGC 96 STM3306 intergenic 3474844 3474902 + down GTGCCTGTAAAACAACCCCCGCATCGCGTTCGCGGGGGTTGTTCAGCGTACAGAAGGT TAAAAACAAACAGAATGTAGAGTAAGTGCCTGTAAAACAACCCCCGCATCGCGTTCGCGGGGGTTGTTCAGCGTACAGAAGGTTATTCGCCTTTCACGCGTTCAATAT ACCTTCTGTACGCTGAACAACCCCCGCGAACGCGATGCGGGGGTTGT 47 TTerm_0747 NC_003197.2 3474855 3474866 12 3474876 3474887 12 9 100 0 24 33 66 33 66 0 3474870 AACAACCCCCGC GCGGGGGTTGTT True GCCTGTAAA CAGCGTACA True False - AACAACCCCCGC GAACGCGAT GCGGGGGTTGTT TTTACAGGC 96 STM3307 intergenic 3474844 3474902 - down ACCTTCTGTACGCTGAACAACCCCCGCGAACGCGATGCGGGGGTTGTTTTACAGGCAC ATATTGAACGCGTGAAAGGCGAATAACCTTCTGTACGCTGAACAACCCCCGCGAACGCGATGCGGGGGTTGTTTTACAGGCACTTACTCTACATTCTGTTTGTTTTTA ACCTTCTGTACGCTGAACAACCCCCGCGAACGCGATGCGGGGGTTGT 47 TTerm_0748 NC_003197.2 3488090 3488111 22 3488121 3488142 22 9 77 0 19 79 20 82 17 0 3488115 AAAAACATTAAGAAAACCTTAA TTTAGGTTTTGTTTAAGTTCTT True CTATGCATA TGTCCATAC True True - AAGAACTTAAACAAAACCTAAA CGAAATTTT TTAAGGTTTTCTTAATGTTTTT TATGCATAG 54 STM3324 intergenic 3487938 3488176 + down ACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCC CAATTCCGGCTTTGACGAAGACTAAACCTCCCCCTCTATACCCTATTTCCCCCAACGCCGTCCCGGTATTTGATGACAGTCACCCCAAAACCGGGCGTGTTACGCCTGCCTGCCTCTTGTCCCGCAGCCCCACCCTTTCGTAAGATTTGTACATTTCGTGCGCTTTACCTATGCATAAAAACATTAAGAAAACCTTAAAAAATTTCGTTTAGGTTTTGTTTAAGTTCTTTGTCCATACTAAATTTATGTGAATAAATTTTTCCAGGACTTGCCATGATCCTCTTATCG GGAAAAATTTATTCACATAAATTTAGTATGGACAAAGAACTTAAACAAAACCTAAACGAAATTTTTTAAGGTTTTCTTAATGTTTT 86 TTerm_0749 NC_003197.2 3512355 3512365 11 3512370 3512380 11 4 100 0 22 54 45 54 45 0 3512367 AAAAAACCCGC GCGGGTTTTTT True TAGCCATAA CGCTAACAG True True - AAAAAACCCGC TTCG GCGGGTTTTTT TTATGGCTA 84 STM3344 intergenic 3512217 3512413 - down ATGGGGTTCTGCTTCGGCAGACAACTGTTAGCGAAAAAACCCGCTTCGGCGGGTTTTTTTATGGCTAAAGTCCGAATCCAGTCTCTTTTCCTCCCTATCTTTAGCATTATTCTCATCTTATTCATTTTTCATGCACGCTCAGAGAAAAGGAAGTCACAGTGGGATTTTTTAACTCATTGTTTACTAAGAAAGAGTC GTCGTCCGCAGTTCTCCAAACGTTAATGGGGTTCTGCTTCGGCAGACAACTGTTAGCGAAAAAACCCGCTTCGGCGGGTTTTTTTATGGCTAAAGTCCGAATCCAGTCTCTTTTCCTCCCTATCTTTAGCATTATTCTCATCTTATTCATTTTTCATGCACGCTCAGAGAAAAGGAAGTCACAGTGGGATTTTTTAACTCATTGTTTACTAAGAAAGAGTCGTTAATGCTGTCGAATAAATGGGAA ATGGGGTTCTGCTTCGGCAGACAACTGTTAGCGAAAAAACCCGCTTCGGCGGGTTTTT 58 TTerm_0750 NC_003197.2 3517955 3517964 10 3517972 3517981 10 7 100 0 20 30 70 30 70 0 3517967 AACGACGCGG CCGCGTCGTT True CGAACTAAA CGACGACTA True False - AACGACGCGG GCAAAAG CCGCGTCGTT TTTAGTTCG 80 STM3349 intergenic 3517954 3517988 + down AACGACGCGGCTTTTGCCCGCGTCGTTCGACGAC GCAGGAATACCCGGCGTCGAACTAAAACGACGCGGCTTTTGCCCGCGTCGTTCGACGACTAGTCAATAAAGACTGGCCCTGCCG GTCGTCGAACGACGCGGGCAAAAGCCGCGTCGT 33 TTerm_0751 NC_003197.2 3517955 3517964 10 3517972 3517981 10 7 100 0 20 30 70 30 70 0 3517967 AACGACGCGG CCGCGTCGTT True CGAACTAAA CGACGACTA True False - AACGACGCGG GCAAAAG CCGCGTCGTT TTTAGTTCG 80 STM3350 intergenic 3517954 3517988 - down GTCGTCGAACGACGCGGGCAAAAGCCGCGTCGTT CGGCAGGGCCAGTCTTTATTGACTAGTCGTCGAACGACGCGGGCAAAAGCCGCGTCGTTTTAGTTCGACGCCGGGTATTCCTGC GTCGTCGAACGACGCGGGCAAAAGCCGCGTCGT 33 TTerm_0752 NC_003197.2 3528739 3528745 7 3528751 3528757 7 5 100 0 14 100 0 100 0 0 3528747 TTTTTAA TTAAAAA True AAATAAAAT GCAGAAACA True False - TTTTTAA AAACA TTAAAAA ATTTTATTT 28 STM3360 intergenic 3528505 3528858 + down TCCCACTTCCTCCGTCGTCGTACGGCGGAGGCACCTTTTTGTCCTCTCCCCTCGCCGCTTTCCTGTACGCCTATCATTTGGCAAATCATGCCCTTAAACATTCACCACATGAATGATAAATCAAAAAAACGCACAAAATGTCAAATTTATTAAGCAATTGATTTTCTTTTATTTTTTAAACGACAGCGGCGAAAAACAGCAATTTTAATTCCATAACGTTATAAAAAATAAAATTTTTAATGTTTTTAAAAAGCAGAAACAATTAGCGTGGTATTAATTAATCGCGTGATTAGTGTATACTTAATTTTGTGATGAGGGTCACGAAACAAAGTCCCCAGTAAAGGAATTCGACG GGAACTTTTTGAACAAGAGCTTTAGTCCCACTTCCTCCGTCGTCGTACGGCGGAGGCACCTTTTTGTCCTCTCCCCTCGCCGCTTTCCTGTACGCCTATCATTTGGCAAATCATGCCCTTAAACATTCACCACATGAATGATAAATCAAAAAAACGCACAAAATGTCAAATTTATTAAGCAATTGATTTTCTTTTATTTTTTAAACGACAGCGGCGAAAAACAGCAATTTTAATTCCATAACGTTATAAAAAATAAAATTTTTAATGTTTTTAAAAAGCAGAAACAATTAGCGTGGTATTAATTAATCGCGTGATTAGTGTATACTTAATTTTGTGATGAGGGTCACGAAACAAAGTCCCCAGTAAAGGAATTCGACGAGGTAAAAATCATGAAAATCAAAAC CGTCGAATTCCTTTACTGGGGACTTTGTTTCGTGACCCTCATCACAAAATTAAGTATACACTAATCACGCGATTAATTAATACCACGCTAATTGTTTCTGCTTTTTAAAAACATTAAAA 119 TTerm_0753 NC_003197.2 3529973 3529984 12 3529990 3530001 12 5 83 0 14 50 50 50 50 0 3529986 AAAAACCGACGC GCATCGGTTCTT True AGTCATAAA GTGGGTTAG True False - AAGAACCGATGC CAAAA GCGTCGGTTTTT TTTATGACT 60 STM3364 intergenic 3529848 3530007 - down ACCCACAAGAACCGATGCCAAAAGCGTCGGTTTTTTTATGACTATACTTATTTGAGATACAAAAACAGCGCAAGAGTGCTCCGGGGCTAAAAGCGTTTCTGGAAGTGAAACCTCTGCATAATGATGCTTAGTAGTAAAACAGACAATTGTCTGTCGGGG ACCAGAACGCGCTTACCGATAGCTAACCCACAAGAACCGATGCCAAAAGCGTCGGTTTTTTTATGACTATACTTATTTGAGATACAAAAACAGCGCAAGAGTGCTCCGGGGCTAAAAGCGTTTCTGGAAGTGAAACCTCTGCATAATGATGCTTAGTAGTAAAACAGACAATTGTCTGTCGGGGATGGTGGCTGGCTATGAATGTCTAT ACCCACAAGAACCGATGCCAAAAGCGTCGGTTTT 34 TTerm_0754 NC_003197.2 3551948 3551957 10 3551963 3551972 10 5 100 0 20 40 60 40 60 0 3551959 AAAAGGCCGG CCGGCCTTTT True TTAATCTCA TTATTTCTG True True - AAAAGGCCGG ATTCA CCGGCCTTTT TGAGATTAA 88 STM3380 intergenic 3551932 3552029 + down TCGCACGTTAATCTCAAAAGGCCGGTGAATCCGGCCTTTTTTATTTCTGGGGATAGCGATGCCCCATCATGTACAATTCCCGCTTTCTTCACCCATA AAAACTCGGTCTTCAGGAAAAGTAATCGCACGTTAATCTCAAAAGGCCGGTGAATCCGGCCTTTTTTATTTCTGGGGATAGCGATGCCCCATCATGTACAATTCCCGCTTTCTTCACCCATAAGGGACAAAAAATGGACGCTCGTTT TATGGGTGAAGAAAGCGGGAATTGTACATGATGGGGCATCGCTATCCCCAGAAATAAAAAAGGCCGGATTCACCGGCCTTT 81 TTerm_0755 NC_003197.2 3582842 3582854 13 3582859 3582871 13 4 100 0 26 61 38 61 38 0 3582856 TAAAAAAACCCGC GCGGGTTTTTTTA True GGAGGGTAT CGTTACTAC True True - TAAAAAAACCCGC TTCG GCGGGTTTTTTTA ATACCCTCC 92 STM3414 intergenic 3582788 3582884 - down ATCTGTAGTAACGTAAAAAAACCCGCTTCGGCGGGTTTTTTTATACCCTCCTGAACCCCACATATCTACAATAATTGTATTCTTTTCGTTCAATCC AGAAAACAGAAGCTGCTGCAGAGTAATCTGTAGTAACGTAAAAAAACCCGCTTCGGCGGGTTTTTTTATACCCTCCTGAACCCCACATATCTACAATAATTGTATTCTTTTCGTTCAATCCCTGGAGCGACGTATGTGGTTACTTG ATCTGTAGTAACGTAAAAAAACCCGCTTCGGCGGGTTTTTTT 42 TTerm_0756 NC_003197.2 3591531 3591543 13 3591548 3591560 13 4 92 0 21 57 42 58 41 0 3591545 AATAAACGGCCCA TGAGCCGTTTATT True GTAGAAAAA CGTTGAGAA True False - AATAAACGGCTCA GCGA TGGGCCGTTTATT TTTTTCTAC 74 STM3431 intergenic 3591430 3591581 - down ATACAGTACGCATTCTCAACGAATAAACGGCTCAGCGATGGGCCGTTTATTTTTTCTACCCATATCTGATTTGCGGTGTTATAATGCCGCGCCCTCGATATGGGGTTTTTTTAACGACCTGATTTTCGGGTCTCAGTAGTAGTTGACATTA GCGTTGTAGAGAAAGCGGTTCTGTAATACAGTACGCATTCTCAACGAATAAACGGCTCAGCGATGGGCCGTTTATTTTTTCTACCCATATCTGATTTGCGGTGTTATAATGCCGCGCCCTCGATATGGGGTTTTTTTAACGACCTGATTTTCGGGTCTCAGTAGTAGTTGACATTAGCGGAGCACTAAAATGATCCAAGAA ATACAGTACGCATTCTCAACGAATAAACGGCTCAGCGATGGGCCGTTTAT 50 TTerm_0757 NC_003197.2 3598260 3598269 10 3598274 3598283 10 4 90 0 15 35 65 33 66 0 3598271 AAAAGGGCGC GCGCCCTCTT True AGGCAACAA CAATTCAAA True False - AAGAGGGCGC TTCG GCGCCCTTTT TTGTTGCCT 78 STM3445 intergenic 3598136 3598309 - down ATTACTCGTTAATTAGTTTTGAATTGAAGAGGGCGCTTCGGCGCCCTTTTTGTTGCCTGCTATTTAGCCGCTGTTATATTTATTCACCCTTTTTAACGCTTCTCCCGTGGCGTAAATCGCTTTGTGCTATTGTAATCATAACCATTCTCATTTACACTTTGTGCGGAAATTGA GCGTTGTTGCTAAAGTTCTGGGCTAATTACTCGTTAATTAGTTTTGAATTGAAGAGGGCGCTTCGGCGCCCTTTTTGTTGCCTGCTATTTAGCCGCTGTTATATTTATTCACCCTTTTTAACGCTTCTCCCGTGGCGTAAATCGCTTTGTGCTATTGTAATCATAACCATTCTCATTTACACTTTGTGCGGAAATTGAACGGGAGCGATCATGTACGTTTGTT ATTACTCGTTAATTAGTTTTGAATTGAAGAGGGCGCTTCGGCGCCCTTT 49 TTerm_0758 NC_003197.2 3598294 3598300 7 3598306 3598312 7 5 100 0 14 85 14 85 14 0 3598302 CTAATTA TAATTAG True ATTCAAAAC CCCAGAACT True False - CTAATTA CTCGT TAATTAG GTTTTGAAT 28 STM3445 intergenic 3598136 3598309 - down ATTACTCGTTAATTAGTTTTGAATTGAAGAGGGCGCTTCGGCGCCCTTTTTGTTGCCTGCTATTTAGCCGCTGTTATATTTATTCACCCTTTTTAACGCTTCTCCCGTGGCGTAAATCGCTTTGTGCTATTGTAATCATAACCATTCTCATTTACACTTTGTGCGGAAATTGA GCGTTGTTGCTAAAGTTCTGGGCTAATTACTCGTTAATTAGTTTTGAATTGAAGAGGGCGCTTCGGCGCCCTTTTTGTTGCCTGCTATTTAGCCGCTGTTATATTTATTCACCCTTTTTAACGCTTCTCCCGTGGCGTAAATCGCTTTGTGCTATTGTAATCATAACCATTCTCATTTACACTTTGTGCGGAAATTGAACGGGAGCGATCATGTACGTTTGTT ATTACTCGTTAATTA 15 TTerm_0759 NC_003197.2 3602764 3602771 8 3602779 3602786 8 7 87 0 11 31 68 28 71 0 3602774 CGCCCTCA TGAGGACG True TAATAAAAC CCGAATTTT True True - CGTCCTCA TATTGTG TGAGGGCG GTTTTATTA 46 STM3449 intergenic 3602729 3602842 - down ATGGCGGGATCGTTGTATATTTCTTGACACCTTTTCGACACCGCCCTAAAATTCGGCGTCCTCATATTGTGTGAGGGCGTTTTATTACGTGTTTACGAAGCAAAAGCTAAAAC AGTATGCCAACCAGATGGCCTGGTGATGGCGGGATCGTTGTATATTTCTTGACACCTTTTCGACACCGCCCTAAAATTCGGCGTCCTCATATTGTGTGAGGGCGTTTTATTACGTGTTTACGAAGCAAAAGCTAAAACCAGGAGCTATTTAATGGCAACAGTT ATGGCGGGATCGTTGTATATTTCTTGACACCTTTTCGACACCGCCCTAAAATTCGGCGTCCTCATATTGTGTGAGGGC 78 TTerm_0760 NC_003197.2 3604846 3604853 8 3604860 3604867 8 6 100 0 16 12 87 12 87 0 3604856 CCGCCGCT AGCGGCGG True AAAAAAAAC CTCTCAGTT True False - CCGCCGCT TGTAAT AGCGGCGG GTTTTTTTT 72 STM3453 intergenic 3604618 3604878 - down AAAACTGAGAGCCGCCGCTTGTAATAGCGGCGGTTTTTTTTATTCAGGCCGGATATATTACTCACCATAATTTGATTTGCGGATAACGGCGCTTGCGCTGGTCGTTAAGGGCGAGACCGTAGGCTGAATGACCGCCAACGCACACGTAGTCTGAAATAGACGAGCAAATTAGTACTGGAAAGATGAACCCTCACTGTATTAATTTAATCATCCGCGTAAATAATGAGCCTGCCCTGAAAACATAACGACAGGCTCCTGAA AAGCCGCAGATGCTGCTAAAAAATAAAAACTGAGAGCCGCCGCTTGTAATAGCGGCGGTTTTTTTTATTCAGGCCGGATATATTACTCACCATAATTTGATTTGCGGATAACGGCGCTTGCGCTGGTCGTTAAGGGCGAGACCGTAGGCTGAATGACCGCCAACGCACACGTAGTCTGAAATAGACGAGCAAATTAGTACTGGAAAGATGAACCCTCACTGTATTAATTTAATCATCCGCGTAAATAATGAGCCTGCCCTGAAAACATAACGACAGGCTCCTGAAAAGGAGTGTTTTTTTTCATGTCCAG AAAACTGAGAGCCGCCGCTTGTAATAGCGGCG 32 TTerm_0761 NC_003197.2 3606139 3606150 12 3606156 3606167 12 5 100 0 24 58 41 58 41 0 3606152 AAAAAAAGCGGG CCCGCTTTTTTT True TTGAGACGA GTGCCCGAT True True - AAAAAAAGCGGG TTAAC CCCGCTTTTTTT TCGTCTCAA 88 STM3454 intergenic 3606134 3606322 + down GACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGAT AGAAACGCCGCCGCCGCATTATTGAGACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGATTAATGGCAGCCGCAGCCGCCTTTAC ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTT 183 TTerm_0762 NC_003197.2 3606139 3606150 12 3606156 3606167 12 5 100 0 24 58 41 58 41 0 3606152 AAAAAAAGCGGG CCCGCTTTTTTT True TTGAGACGA GTGCCCGAT True True - AAAAAAAGCGGG TTAAC CCCGCTTTTTTT TCGTCTCAA 88 STM3455 intergenic 3606134 3606322 - down ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTC GTAAAGGCGGCTGCGGCTGCCATTAATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTCTCAATAATGCGGCGGCGGCGTTTCT ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTT 183 TTerm_0763 NC_003197.2 3606244 3606257 14 3606262 3606275 14 4 78 0 13 32 67 27 72 0 3606259 CCCCGGGAGCATAG CTATGTGACCGGGG True TGAAAATTC TTTGAAAGC True False - CCCCGGTCACATAG TTAT CTATGCTCCCGGGG GAATTTTCA 42 STM3454 intergenic 3606134 3606322 + down GACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGAT AGAAACGCCGCCGCCGCATTATTGAGACGAAAAAAAGCGGGGTTAACCCGCTTTTTTTGTGCCCGATGATTTATCGAACCAATGATAATACCCTAAGGATTTCGAGTCACAGCAAGGCTGCAAGCTTGAAAATTCCCCGGGAGCATAGATAACTATGTGACCGGGGTTTGAAAGCGTAGCCAACACCGCGGTGGCTTGAAAGACGACGGGGATTAATGGCAGCCGCAGCCGCCTTTAC ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGG 78 TTerm_0764 NC_003197.2 3606244 3606257 14 3606262 3606275 14 4 78 0 13 32 67 27 72 0 3606259 CCCCGGGAGCATAG CTATGTGACCGGGG True TGAAAATTC TTTGAAAGC True False - CCCCGGTCACATAG TTAT CTATGCTCCCGGGG GAATTTTCA 42 STM3455 intergenic 3606134 3606322 - down ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTC GTAAAGGCGGCTGCGGCTGCCATTAATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGGGAATTTTCAAGCTTGCAGCCTTGCTGTGACTCGAAATCCTTAGGGTATTATCATTGGTTCGATAAATCATCGGGCACAAAAAAAGCGGGTTAACCCCGCTTTTTTTCGTCTCAATAATGCGGCGGCGGCGTTTCT ATCCCCGTCGTCTTTCAAGCCACCGCGGTGTTGGCTACGCTTTCAAACCCCGGTCACATAGTTATCTATGCTCCCGGG 78 TTerm_0765 NC_003197.2 3613906 3613915 10 3613924 3613933 10 8 80 0 10 65 35 75 25 0 3613919 AAAGCAGTTT AAACGCCTTT True ATGCCGAAA GCCGACAAT True False - AAAGGCGTTT TATTCGCG AAACTGCTTT TTTCGGCAT 44 STM3463 intergenic 3613794 3613965 + down ACATGAACGTTCGCTTGAACAAAAAGTCGCTGACGTAAAACGCCAACTGCAATCCGGCGAGGCCGTGCTGGTATGGTCTGAATTACATGAAACGGTCAATATTATGCCGAAAAAGCAGTTTCGCGAATAAAACGCCTTTGCCGACAATACATTATTACTAAAGCTCAATCA TGCGCGAAGGCACCGATTATGGTGAACATGAACGTTCGCTTGAACAAAAAGTCGCTGACGTAAAACGCCAACTGCAATCCGGCGAGGCCGTGCTGGTATGGTCTGAATTACATGAAACGGTCAATATTATGCCGAAAAAGCAGTTTCGCGAATAAAACGCCTTTGCCGACAATACATTATTACTAAAGCTCAATCATGGAGTTGCCATGTCAGCCAAACAT TGATTGAGCTTTAGTAATAATGTATTGTCGGCAAAGGCGTTTTATTCGCGAAACTGCTT 59 TTerm_0766 NC_003197.2 3621199 3621204 6 3621214 3621219 6 9 100 0 12 0 100 0 100 0 3621208 CGCGGG CCCGCG True GGAGAAAAC CAGGCATGT True False - CGCGGG TGCGAGCCG CCCGCG GTTTTCTCC 72 STM3472 intergenic 3621133 3621230 - down AAACATGCCTGCGCGGGTGCGAGCCGCCCGCGTTTTCTCCCTGTCTCAGCGTAACCTGAAATTGCTGCTTATACTTGTGGTCAAGCACAGGCATATT TCCTTTCCGCGAAAGTCCTGCCATAAAACATGCCTGCGCGGGTGCGAGCCGCCCGCGTTTTCTCCCTGTCTCAGCGTAACCTGAAATTGCTGCTTATACTTGTGGTCAAGCACAGGCATATTCAGGGAGGCCAGGTGAAGAAACTTA AAACATGCCTGCGCGGGTGCGAGCCGCCCGC 31 TTerm_0767 NC_003197.2 3628851 3628865 15 3628871 3628885 15 5 93 0 25 63 36 64 35 0 3628867 TAAAATAACGCCCTG CAGGGCTTTATTTTA True TCATTAATT CAACTACTC True True - TAAAATAAAGCCCTG AATAA CAGGGCGTTATTTTA AATTAATGA 90 STM3477 intergenic 3628849 3629155 + down TTAAAATAACGCCCTGTTATTCAGGGCTTTATTTTACAACTACTCGTAATCTCAAATTATTTTTACTTAAAAGTGAATTAAGAAACTAACTTTAAATACACCGGACAAATTTAAATAATAATTCTGCCTAAAAACCCTTTTACTCGTCAAATTCACCTCTTATTCATTCATACAATAAATAACACCGTTAAGCACTCAATTTGACCTGACCTGGTTATCGGGTGATAAAATAAACACTAAAGCATAATTTTTCTTCTGGCCATTTCATCATTGCCTGTACCGCTCTCTGCATATGTTTAGTACGCA ATTAAATTGGTTCTCTAATCATTAATTAAAATAACGCCCTGTTATTCAGGGCTTTATTTTACAACTACTCGTAATCTCAAATTATTTTTACTTAAAAGTGAATTAAGAAACTAACTTTAAATACACCGGACAAATTTAAATAATAATTCTGCCTAAAAACCCTTTTACTCGTCAAATTCACCTCTTATTCATTCATACAATAAATAACACCGTTAAGCACTCAATTTGACCTGACCTGGTTATCGGGTGATAAAATAAACACTAAAGCATAATTTTTCTTCTGGCCATTTCATCATTGCCTGTACCGCTCTCTGCATATGTTTAGTACGCAAGGAAAATATTAATTAAGGATGAAC TGCGTACTAAACATATGCAGAGAGCGGTACAGGCAATGATGAAATGGCCAGAAGAAAAATTATGCTTTAGTGTTTATTTTATCACCCGATAACCAGGTCAGGTCAAATTGAGTGCTTAACGGTGTTATTTATTGTATGAATGAATAAGAGGTGAATTTGACGAGTAAAAGGGTTTTTAGGCAGAATTATTATTTAAATTTGTCCGGTGTATTTAAAGTTAGTTTCTTAATTCACTTTTAAGTAAAAATAATTTGAGATTACGAGTAGTTGTAAAATAAAGCCCTGAATAACAGGGCGTTATTTT 304 TTerm_0768 NC_003197.2 3635027 3635034 8 3635040 3635047 8 5 87 0 11 68 31 71 28 0 3635036 ATTTCGTT AACGACAT True AAGAAAACA TATATAACA True False - ATGTCGTT TATTT AACGAAAT TGTTTTCTT 46 STM3478 intergenic 3635036 3635061 + down ATAAACGACATTATATAACACTAAT TAACGTTAAGAAAACATTTCGTTAAATAAACGACATTATATAACACTAATAAATATCCTCCGGCATAGCCGGAGG ATTAGTGTTATATAATGTCGTTTATTTAACGAAA 34 TTerm_0769 NC_003197.2 3635027 3635034 8 3635040 3635047 8 5 87 0 11 68 31 71 28 0 3635036 ATTTCGTT AACGACAT True AAGAAAACA TATATAACA True False - ATGTCGTT TATTT AACGAAAT TGTTTTCTT 46 intergenic 3635036 3635061 - down ATTAGTGTTATATAATGTCGTTTAT CCTCCGGCTATGCCGGAGGATATTTATTAGTGTTATATAATGTCGTTTATTTAACGAAATGTTTTCTTAACGTTA ATTAGTGTTATATAATGTCGTTTATTTAACGAAA 34 TTerm_0770 NC_003197.2 3641049 3641058 10 3641066 3641075 10 7 90 0 15 75 25 77 22 0 3641061 AAACTGACAT ATATCAGTTT True AAGCTAAAA GACCTTTCT True False - AAACTGATAT TGCGTAG ATGTCAGTTT TTTTAGCTT 38 STM3486 intergenic 3641004 3641090 - down ACAACAAGAAAGGTCAAACTGATATTGCGTAGATGTCAGTTTTTTAGCTTCAGGTTATGTGCAATGTCGTAAGCATTAACCTTTGA CGATTGCTGACTGTCAGCAGGCGTGACAACAAGAAAGGTCAAACTGATATTGCGTAGATGTCAGTTTTTTAGCTTCAGGTTATGTGCAATGTCGTAAGCATTAACCTTTGAGTGGGGTGTTAAATGGATGAATTCA ACAACAAGAAAGGTCAAACTGATATTGCGTAGATGTCAGTT 41 TTerm_0771 NC_003197.2 3649216 3649226 11 3649231 3649241 11 4 100 0 22 54 45 54 45 0 3649228 AAAAAAGGCGC GCGCCTTTTTT True TTCTGATCA ATTGTGTTT True True - AAAAAAGGCGC CGGA GCGCCTTTTTT TGATCAGAA 84 STM3493 intergenic 3649213 3649309 + down TCAAAAAAGGCGCTCCGGCGCCTTTTTTATTGTGTTTAGCGGATGACGGCGAACGGGGAGACAAACTTTCCGTTGGCTTGATCAACGCCGCGCCAT TGGTGAAACACACGAACTGTTCTGATCAAAAAAGGCGCTCCGGCGCCTTTTTTATTGTGTTTAGCGGATGACGGCGAACGGGGAGACAAACTTTCCGTTGGCTTGATCAACGCCGCGCCATCAGGCAATTCGGCCCTGCGCTTTCA ATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTT 93 TTerm_0772 NC_003197.2 3649216 3649226 11 3649231 3649241 11 4 100 0 22 54 45 54 45 0 3649228 AAAAAAGGCGC GCGCCTTTTTT True TTCTGATCA ATTGTGTTT True True - AAAAAAGGCGC CGGA GCGCCTTTTTT TGATCAGAA 84 STM3494 intergenic 3649213 3649309 - down ATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTTTGA TGAAAGCGCAGGGCCGAATTGCCTGATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTTTGATCAGAACAGTTCGTGTGTTTCACCA ATGGCGCGGCGTTGATCAAGCCAACGGAAAGTTTGTCTCCCCGTTCGCCGTCATCCGCTAAACACAATAAAAAAGGCGCCGGAGCGCCTTTTT 93 TTerm_0773 NC_003197.2 3690260 3690266 7 3690271 3690277 7 4 100 0 14 14 85 14 85 0 3690268 GGGCGGT ACCGCCC True AAAATCCGG TTTTCGCCA True True - GGGCGGT ATAA ACCGCCC CCGGATTTT 68 STM3526 intergenic 3690250 3690297 + down TAAAATCCGGGGCGGTTTATACCGCCCTTTTCGCCACATACCGCATT ACACCAACTTTCAATGGCGTCGTAATAAAATCCGGGGCGGTTTATACCGCCCTTTTCGCCACATACCGCATTCACTCGCCGGGTTTTGTACAGCCGG AATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCC 37 TTerm_0774 NC_003197.2 3690260 3690266 7 3690271 3690277 7 4 100 0 14 14 85 14 85 0 3690268 GGGCGGT ACCGCCC True AAAATCCGG TTTTCGCCA True True - GGGCGGT ATAA ACCGCCC CCGGATTTT 68 STM3527 intergenic 3690250 3690297 - down AATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCCCCGGATTTTA CCGGCTGTACAAAACCCGGCGAGTGAATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCCCCGGATTTTATTACGACGCCATTGAAAGTTGGTGT AATGCGGTATGTGGCGAAAAGGGCGGTATAAACCGCC 37 TTerm_0775 NC_003197.2 3698886 3698894 9 3698899 3698907 9 4 100 0 18 22 77 22 77 0 3698896 AACGGGGCC GGCCCCGTT True CGATAAAAA CTCAAGCGT True False - AACGGGGCC AAAC GGCCCCGTT TTTTTATCG 84 STM3534 intergenic 3698746 3698924 - down GCGGTTTAACGCTTGAGAACGGGGCCAAACGGCCCCGTTTTTTATCGTGGTATATTCGGGGGGTATGCCGATATTCGTCTGCTGAATCTGTTAGCGGCACTTGGTCTCTGTCATGGAAAAAGGGTCGAGTACTGGTGTATAGTATTAGCAGAAAAATCCATAATTAATTGATAATAAT GGCATATTGATCCGGTGCGGTTGTAGCGGTTTAACGCTTGAGAACGGGGCCAAACGGCCCCGTTTTTTATCGTGGTATATTCGGGGGGTATGCCGATATTCGTCTGCTGAATCTGTTAGCGGCACTTGGTCTCTGTCATGGAAAAAGGGTCGAGTACTGGTGTATAGTATTAGCAGAAAAATCCATAATTAATTGATAATAATATGAAAAAGATTACGACATCTATTC GCGGTTTAACGCTTGAGAACGGGGCCAAACGGCCCCGT 38 TTerm_0776 NC_003197.2 3716205 3716213 9 3716223 3716231 9 9 100 0 18 77 22 77 22 0 3716217 AATAACCAT ATGGTTATT True ATCAAAACA ACCACTTTA True False - AATAACCAT GAAATTCAG ATGGTTATT TGTTTTGAT 52 STM3546 intergenic 3716117 3716376 + down CGCTTCCCCGCCCCACCCTGTGGGGCGAAACGTCACAAACCTTCACAACATTCCAGTTATTGCAACCTACTTCCCCTATATCAAAACAATAACCATCTGAATTTCATGGTTATTACCACTTTAAGCTTTATCACCGTTTTTTCCGTAATTTTAGCAATATTAATATTACATTTTTGTTTTTTTTTGGTTTCTGCCATCACTTTATGGTGACAATCACAACAATATACTCCTCCCGGGACTAATTTAACCACGGTGAGGT GTACTTTATGGCGCGCGTGAAATAACGCTTCCCCGCCCCACCCTGTGGGGCGAAACGTCACAAACCTTCACAACATTCCAGTTATTGCAACCTACTTCCCCTATATCAAAACAATAACCATCTGAATTTCATGGTTATTACCACTTTAAGCTTTATCACCGTTTTTTCCGTAATTTTAGCAATATTAATATTACATTTTTGTTTTTTTTTGGTTTCTGCCATCACTTTATGGTGACAATCACAACAATATACTCCTCCCGGGACTAATTTAACCACGGTGAGGTAAAAAATGAAATTTGAACGCCATCA ACCTCACCGTGGTTAAATTAGTCCCGGGAGGAGTATATTGTTGTGATTGTCACCATAAAGTGATGGCAGAAACCAAAAAAAAACAAAAATGTAATATTAATATTGCTAAAATTACGGAAAAAACGGTGATAAAGCTTAAAGTGGTAATAACCATGAAATTCAGATGGTTAT 171 TTerm_0777 NC_003197.2 3718379 3718389 11 3718394 3718404 11 4 90 0 17 63 36 60 40 0 3718391 AATGGAGTAAC GTTACTCCTTT True TAAAAAACA TATAAAATA True True - AAAGGAGTAAC TTTC GTTACTCCATT TGTTTTTTA 50 STM3548 intergenic 3718373 3718421 + down AAAACAATGGAGTAACGAAAGTTACTCCTTTTATAAAATATAAGGATT GCTTCAATTCATCGCCAGAAAATAAAAAACAATGGAGTAACGAAAGTTACTCCTTTTATAAAATATAAGGATTGATGTATGAACAAGAATAAGTACTC AATCCTTATATTTTATAAAAGGAGTAACTTTCGTTACTCCAT 42 TTerm_0778 NC_003197.2 3727778 3727787 10 3727795 3727804 10 7 90 0 15 90 10 88 11 0 3727790 TAACTTTTTT AAAAAAGATA True CAGAAAAAT GTAAGGCGA True False - TATCTTTTTT TTGTAAT AAAAAAGTTA ATTTTTCTG 30 STM3558 intergenic 3727699 3727948 - down AGACGTTAATCCCGGCGACGCTCCGCCTGGTTGGGTTACGGCATGTGCGCCGCCCCCGAGAATAATGTCGTACCTATCCGTGCCGTAGCTCCCACTTTTCTTTTCCGGCGCTTTCGCTGCCTTGCCATCTCTCTGTCGCCTTACTATCTTTTTTTTGTAATAAAAAAGTTATTTTTCTGTCATTCGAGCATGTCATGTTACCCCCGCGAACATAAAACGCGTGATATCGCGCATCCCGGCACAAAAAGA AAATTGCCGTTCGCTTACGTGCCTGAGACGTTAATCCCGGCGACGCTCCGCCTGGTTGGGTTACGGCATGTGCGCCGCCCCCGAGAATAATGTCGTACCTATCCGTGCCGTAGCTCCCACTTTTCTTTTCCGGCGCTTTCGCTGCCTTGCCATCTCTCTGTCGCCTTACTATCTTTTTTTTGTAATAAAAAAGTTATTTTTCTGTCATTCGAGCATGTCATGTTACCCCCGCGAACATAAAACGCGTGATATCGCGCATCCCGGCACAAAAAGAGAGATAACCGATGATATCGTTACGA AGACGTTAATCCCGGCGACGCTCCGCCTGGTTGGGTTACGGCATGTGCGCCGCCCCCGAGAATAATGTCGTACCTATCCGTGCCGTAGCTCCCACTTTTCTTTTCCGGCGCTTTCGCTGCCTTGCCATCTCTCTGTCGCCTTACTATCTTTTTTTTGTAATAAAAAAGTT 170 TTerm_0779 NC_003197.2 3728584 3728592 9 3728597 3728605 9 4 100 0 18 55 44 55 44 0 3728594 AAAAGAGCC GGCTCTTTT True TGTACAAAA GAAAAATTT True False - AAAAGAGCC TGAT GGCTCTTTT TTTTGTACA 68 STM3560 intergenic 3728548 3728666 - down GACTGTGCCAGGGGGGAAGCGCGTGCGCCGCCCCCGGTAACGGCAAGCGGTAAAATTTTTCAAAAGAGCCTGATGGCTCTTTTTTTGTACATGTTTGTTGTACAATAAACATGTACAA TGCGCAGCGCCTATCTGGGCGGTTAGACTGTGCCAGGGGGGAAGCGCGTGCGCCGCCCCCGGTAACGGCAAGCGGTAAAATTTTTCAAAAGAGCCTGATGGCTCTTTTTTTGTACATGTTTGTTGTACAATAAACATGTACAACTGGGGAGATGTTTATGCGTACGGT GACTGTGCCAGGGGGGAAGCGCGTGCGCCGCCCCCGGTAACGGCAAGCGGTAAAATTTTTCAAAAGAGCCTGATGGCTCTTT 82 TTerm_0780 NC_003197.2 3735894 3735904 11 3735909 3735919 11 4 90 0 17 50 50 50 50 0 3735906 AACCCCCGAAT ATTCGAGGGTT True AAAAACAAA CATTGGCAA True False - AACCCTCGAAT GTGA ATTCGGGGGTT TTTGTTTTT 50 STM3568 intergenic 3735715 3735939 - down ATCTTCGCGAATTGCCAATGAACCCTCGAATGTGAATTCGGGGGTTTTGTTTTTTGTAGGCTGGATAAGGCGTTTACGCTGCCATCCGGCAATACGTTTGCCCGATGGCGCTTCGCTTATCGGGCCTACGGACCCTTCCTCTCCCCCACCGACACAAATCTGTTATCTGGATGTAAATTTAGCTATTCCAAAATAATAAAAATCGGGTATGTTTTAGCAGAGTA AGCTTCGCGCTGCGATCGAAGCGTAATCTTCGCGAATTGCCAATGAACCCTCGAATGTGAATTCGGGGGTTTTGTTTTTTGTAGGCTGGATAAGGCGTTTACGCTGCCATCCGGCAATACGTTTGCCCGATGGCGCTTCGCTTATCGGGCCTACGGACCCTTCCTCTCCCCCACCGACACAAATCTGTTATCTGGATGTAAATTTAGCTATTCCAAAATAATAAAAATCGGGTATGTTTTAGCAGAGTATGCTGCTAAAGCACGGGTAGCTAGC ATCTTCGCGAATTGCCAATGAACCCTCGAATGTGAATTCGGGGGT 45 TTerm_0781 NC_003197.2 3774481 3774491 11 3774499 3774509 11 7 100 0 22 45 54 45 54 0 3774494 AATCGGGATCC GGATCCCGATT True CCAAAAAAA CAGCCTGCT True False - AATCGGGATCC AGATCGC GGATCCCGATT TTTTTTTGG 76 STM3602 intergenic 3774372 3774541 - down ATGTCAGCATTACGCTAACGAAGAGCAGGCTGAATCGGGATCCAGATCGCGGATCCCGATTTTTTTTGGTTTCCATCTTGATCAAATGTCTTTAAATGTCATATAAAAATAATAATACATTATGAGTCATTTATGGCGAATCCTCGCCTGTATCATTGATGGAACCAGA GCGATAAAATACGGTTTACCGTATGATGTCAGCATTACGCTAACGAAGAGCAGGCTGAATCGGGATCCAGATCGCGGATCCCGATTTTTTTTGGTTTCCATCTTGATCAAATGTCTTTAAATGTCATATAAAAATAATAATACATTATGAGTCATTTATGGCGAATCCTCGCCTGTATCATTGATGGAACCAGAGGAAAGCATGATGGGTATGAAAGAG ATGTCAGCATTACGCTAACGAAGAGCAGGCTGAATCGGGATCCAGATCGCGGATCCCGAT 60 TTerm_0782 NC_003197.2 3808113 3808130 18 3808135 3808152 18 4 83 0 21 30 69 26 73 0 3808132 CCGAAAAAGGCCGCAAGG CCCTGCGGCCTGGTTCGG True GCAGTAAAC GCGCATGTT True False - CCGAACCAGGCCGCAGGG GAAA CCTTGCGGCCTTTTTCGG GTTTACTGC 82 STM3624 intergenic 3808111 3808685 + down ACCGAAAAAGGCCGCAAGGTTTCCCCTGCGGCCTGGTTCGGGCGCATGTTGCCATTACGGCGGACAGACGCTCAAAACGCGTTACTTCCTGTCACGTAGCCAGTTGACGATCACACTGGCGATAATGCCAGCAATGATCGGCGCTGCCAGATCGTGCCAGAAGACCACGCCCAACTGCGTAAGCGTCATATAGCCGCCTTGTTGCAATGGCAACCGTTCGCGGCTATCCTTAAAGTGTTTGGGTTCAAGTTAGCCCCCGTCAGGTTGCCAGGTTTATACCAGTCAACGTGCGGGGGTTTTCTCTATCCAGCAACCTATGCCGCCGGGGATCAAACCCCCGCAACATTGCGCCTCACCGGGTAAACCCGGCTTGCTGCTGATATTACGGCAAAATCCCCGTCCCGGCACGGCGCTAACGTGCAATCTGCGTGACGCTTCGCAGACGATTACTTTTATTTGCCAGAATACATTCAGCATTTCTGAGGCTGGCAGTCAGCCGCTCAATTCTGTAAATTATGCCTCCTCGCGGCCAGTCCCGGTGATACCGAAACCCTCGTTCAGCATCCTGCGTCTA TAGACGCAGGATGCTGAACGAGGGTTTCGGTATCACCGGGACTGGCCGCGAGGAGGCATAATTTACAGAATTGAGCGGCTGACTGCCAGCCTCAGAAATGCTGAATGTATTCTGGCAAATAAAAGTAATCGTCTGCGAAGCGTCACGCAGATTGCACGTTAGCGCCGTGCCGGGACGGGGATTTTGCCGTAATATCAGCAGCAAGCCGGGTTTACCCGGTGAGGCGCAATGTTGCGGGGGTTTGATCCCCGGCGGCATAGGTTGCTGGATAGAGAAAACCCCCGCACGTTGACTGGTATAAACCTGGCAACCTGACGGGGGCTAACTTGAACCCAAACACTTTAAGGATAGCCGCGAACGGTTGCCATTGCAACAAGGCGGCTATATGACGCTTACGCAGTTGGGCGTGGTCTTCTGGCACGATCTGGCAGCGCCGATCATTGCTGGCATTATCGCCAGTGTGATCGTCAACTGGCTACGTGACAGGAAGTAACGCGTTTTGAGCGTCTGTCCGCCGTAATGGCAACATGCGCCCGAACCAGGCCGCAGGGGAAACCTTGCGGCCTTTTTCG 572 TTerm_0783 NC_003197.2 3817953 3817961 9 3817966 3817974 9 4 100 0 18 22 77 22 77 0 3817963 ACCGCCAGC GCTGGCGGT True AAAAAATAA CTGTATTAT True False - ACCGCCAGC CCGC GCTGGCGGT TTATTTTTT 76 STM3632 intergenic 3817926 3817980 - down ATACAGACCGCCAGCCCGCGCTGGCGGTTATTTTTTTGATGTTTTATGGGAGTT CTGATGCCATTAGTTGGTTGAAATAATACAGACCGCCAGCCCGCGCTGGCGGTTATTTTTTTGATGTTTTATGGGAGTTAATCATGCCGCAACCTGGCCTTACT ATACAGACCGCCAGCCCGCGCTGGCGG 27 TTerm_0784 NC_003197.2 3822471 3822478 8 3822483 3822490 8 4 100 0 16 25 75 25 75 0 3822480 AGGGCCAG CTGGCCCT True AATGGAAAA CAGTGATTA True False - AGGGCCAG TTCG CTGGCCCT TTTTCCATT 72 STM3636 intergenic 3822293 3822497 - down ATCACTGAGGGCCAGTTCGCTGGCCCTTTTCCATTTTTAGTGATTTTTTGTAAAAATCTTCTCCGATCACACTCTCCGTTGCCACTTTCCCCTCTGCTTGTGGTCTACTTAACCGTGCTTGTAGACTTTCTTACATCTGCGTTAGCCGCATATTTACCTGTTTGATTAAAGAATCGTTGTACAGGTCGTTTTTATCCCGATTCC TGAATTTTAGCGTCACATACGAATAATCACTGAGGGCCAGTTCGCTGGCCCTTTTCCATTTTTAGTGATTTTTTGTAAAAATCTTCTCCGATCACACTCTCCGTTGCCACTTTCCCCTCTGCTTGTGGTCTACTTAACCGTGCTTGTAGACTTTCTTACATCTGCGTTAGCCGCATATTTACCTGTTTGATTAAAGAATCGTTGTACAGGTCGTTTTTATCCCGATTCCCAGGGTTTGTTTGCATGAGATACAT ATCACTGAGGGCCAGTTCGCTGGCCC 26 TTerm_0785 NC_003197.2 3827406 3827416 11 3827422 3827432 11 5 100 0 22 45 54 45 54 0 3827418 AATGGCAACGG CCGTTGCCATT True CTGGAAAAA ATGATTGTC True False - AATGGCAACGG AAATC CCGTTGCCATT TTTTTCCAG 76 STM3640 intergenic 3827389 3827461 - down ATCGAATTTTCGTTAATACAGACAATCATAATGGCAACGGAAATCCCGTTGCCATTTTTTCCAGCGGAGGCT TGGACTTCAACCTGTCCTACGAATAATCGAATTTTCGTTAATACAGACAATCATAATGGCAACGGAAATCCCGTTGCCATTTTTTCCAGCGGAGGCTCAGGAAGAGAATCATGAACCGCTCA ATCGAATTTTCGTTAATACAGACAATCATAATGGCAACGGAAATCCCGTTGCCAT 55 TTerm_0786 NC_003197.2 3828303 3828310 8 3828316 3828323 8 5 87 0 11 25 75 28 71 0 3828312 AGGGCACC GGTGCGCT True TAAAAAAAA GTACGCTTG True False - AGCGCACC CATTT GGTGCCCT TTTTTTTTA 62 STM3641 intergenic 3827997 3828503 - down ACTTAAAAATTATAATCGAAACGCAGTGATAACAGCTCTTGTGGCGGAAGTAGGGTGCTAACCTTCTGCGTTATCTTTGCGCTGTTAATTATCTCGCTGGCACTTTCCACCACTATTCGCCAGCCGCAGCGGGAGGGGGTTAGCGAAGCGTCTGCGTAACACATGCAACACCAAGCGTACAGCGCACCCATTTGGTGCCCTTTTTTTTATTTAGCACAAATACCTAATCAATTGTAGTTAAAAAAACGTCTAATAAATAAGGAAGACATTTAACTTATTTATGAATAGGAAGAAATAATATATTAATTATATTAATTTATTCTTAATAAAAAATTACATTTATGTACATTCCATTTGTAATATATTGATTTCTATTCTTTTTAAGATTAACTAACAATTATTTTTATATATACTAATTATAGTATCCAATACCCACCTCTATACACTCCATTTCCTCACAGAATGCAGATAATCCTAAGGATGCGTTCTGTTATCTACCGTCATAA CCTTGGGGGTGAGCGCCAGGTTTTAACTTAAAAATTATAATCGAAACGCAGTGATAACAGCTCTTGTGGCGGAAGTAGGGTGCTAACCTTCTGCGTTATCTTTGCGCTGTTAATTATCTCGCTGGCACTTTCCACCACTATTCGCCAGCCGCAGCGGGAGGGGGTTAGCGAAGCGTCTGCGTAACACATGCAACACCAAGCGTACAGCGCACCCATTTGGTGCCCTTTTTTTTATTTAGCACAAATACCTAATCAATTGTAGTTAAAAAAACGTCTAATAAATAAGGAAGACATTTAACTTATTTATGAATAGGAAGAAATAATATATTAATTATATTAATTTATTCTTAATAAAAAATTACATTTATGTACATTCCATTTGTAATATATTGATTTCTATTCTTTTTAAGATTAACTAACAATTATTTTTATATATACTAATTATAGTATCCAATACCCACCTCTATACACTCCATTTCCTCACAGAATGCAGATAATCCTAAGGATGCGTTCTGTTATCTACCGTCATAAATGGAGTTTTTAATGAAAAAGGTTG ACTTAAAAATTATAATCGAAACGCAGTGATAACAGCTCTTGTGGCGGAAGTAGGGTGCTAACCTTCTGCGTTATCTTTGCGCTGTTAATTATCTCGCTGGCACTTTCCACCACTATTCGCCAGCCGCAGCGGGAGGGGGTTAGCGAAGCGTCTGCGTAACACATGCAACACCAAGCGTACAGCGCACCCATTTGGTGCCC 200 TTerm_0787 NC_003197.2 3837383 3837392 10 3837400 3837409 10 7 100 0 20 40 60 40 60 0 3837395 GCCCGATAAC GTTATCGGGC True AAAAAAATG CTATAAAAC True False - GCCCGATAAC CCATTAT GTTATCGGGC CATTTTTTT 56 STM3650 intergenic 3837376 3837748 + down AAAAATGCCCGATAACATAATGGGTTATCGGGCCTATAAAACGCCAACAAGATAAAATTAACAGAGTGCCTTGAGAATGCATAACGCCACAAGAATGGCAGAGGTGGGCTCACTTTGTACTGACCCCAAAAACCTGGACAGATTAACCGAGGCATCAGCGAAAGAGTCCATTTAATACATGGGCTCTTTTTTGTTTCTGGCTATAACTAAATAACATTGTCCGCAATCGAATTATCCATTCCGTTGCTTTCTTGCATCACGCGGATTCCTGTCTCATCAATATTTTGTTCGTCGTATTCTTCCTGAATTTAACCTTAGACATTCTATCAAATTATCGCTTATAGCGATTTGAACATAACAGTCTTTGCATTC TCTGACGGAATTACCATTACGTTAAAAAAATGCCCGATAACATAATGGGTTATCGGGCCTATAAAACGCCAACAAGATAAAATTAACAGAGTGCCTTGAGAATGCATAACGCCACAAGAATGGCAGAGGTGGGCTCACTTTGTACTGACCCCAAAAACCTGGACAGATTAACCGAGGCATCAGCGAAAGAGTCCATTTAATACATGGGCTCTTTTTTGTTTCTGGCTATAACTAAATAACATTGTCCGCAATCGAATTATCCATTCCGTTGCTTTCTTGCATCACGCGGATTCCTGTCTCATCAATATTTTGTTCGTCGTATTCTTCCTGAATTTAACCTTAGACATTCTATCAAATTATCGCTTATAGCGATTTGAACATAACAGTCTTTGCATTCTATTGAGGGAGCCTAAGGAACAATG GAATGCAAAGACTGTTATGTTCAAATCGCTATAAGCGATAATTTGATAGAATGTCTAAGGTTAAATTCAGGAAGAATACGACGAACAAAATATTGATGAGACAGGAATCCGCGTGATGCAAGAAAGCAACGGAATGGATAATTCGATTGCGGACAATGTTATTTAGTTATAGCCAGAAACAAAAAAGAGCCCATGTATTAAATGGACTCTTTCGCTGATGCCTCGGTTAATCTGTCCAGGTTTTTGGGGTCAGTACAAAGTGAGCCCACCTCTGCCATTCTTGTGGCGTTATGCATTCTCAAGGCACTCTGTTAATTTTATCTTGTTGGCGTTTTATAGGCCCGATAACCCATTATGTTATCGGG 365 TTerm_0788 NC_003197.2 3837383 3837392 10 3837400 3837409 10 7 100 0 20 40 60 40 60 0 3837395 GCCCGATAAC GTTATCGGGC True AAAAAAATG CTATAAAAC True False - GCCCGATAAC CCATTAT GTTATCGGGC CATTTTTTT 56 STM3651 intergenic 3837376 3837748 - down GAATGCAAAGACTGTTATGTTCAAATCGCTATAAGCGATAATTTGATAGAATGTCTAAGGTTAAATTCAGGAAGAATACGACGAACAAAATATTGATGAGACAGGAATCCGCGTGATGCAAGAAAGCAACGGAATGGATAATTCGATTGCGGACAATGTTATTTAGTTATAGCCAGAAACAAAAAAGAGCCCATGTATTAAATGGACTCTTTCGCTGATGCCTCGGTTAATCTGTCCAGGTTTTTGGGGTCAGTACAAAGTGAGCCCACCTCTGCCATTCTTGTGGCGTTATGCATTCTCAAGGCACTCTGTTAATTTTATCTTGTTGGCGTTTTATAGGCCCGATAACCCATTATGTTATCGGGCATTTTT CATTGTTCCTTAGGCTCCCTCAATAGAATGCAAAGACTGTTATGTTCAAATCGCTATAAGCGATAATTTGATAGAATGTCTAAGGTTAAATTCAGGAAGAATACGACGAACAAAATATTGATGAGACAGGAATCCGCGTGATGCAAGAAAGCAACGGAATGGATAATTCGATTGCGGACAATGTTATTTAGTTATAGCCAGAAACAAAAAAGAGCCCATGTATTAAATGGACTCTTTCGCTGATGCCTCGGTTAATCTGTCCAGGTTTTTGGGGTCAGTACAAAGTGAGCCCACCTCTGCCATTCTTGTGGCGTTATGCATTCTCAAGGCACTCTGTTAATTTTATCTTGTTGGCGTTTTATAGGCCCGATAACCCATTATGTTATCGGGCATTTTTTTAACGTAATGGTAATTCCGTCAGA GAATGCAAAGACTGTTATGTTCAAATCGCTATAAGCGATAATTTGATAGAATGTCTAAGGTTAAATTCAGGAAGAATACGACGAACAAAATATTGATGAGACAGGAATCCGCGTGATGCAAGAAAGCAACGGAATGGATAATTCGATTGCGGACAATGTTATTTAGTTATAGCCAGAAACAAAAAAGAGCCCATGTATTAAATGGACTCTTTCGCTGATGCCTCGGTTAATCTGTCCAGGTTTTTGGGGTCAGTACAAAGTGAGCCCACCTCTGCCATTCTTGTGGCGTTATGCATTCTCAAGGCACTCTGTTAATTTTATCTTGTTGGCGTTTTATAGGCCCGATAACCCATTATGTTATCGGG 365 TTerm_0789 NC_003197.2 3839738 3839747 10 3839754 3839763 10 6 100 0 20 60 40 60 40 0 3839750 AAAAACCTGC GCAGGTTTTT True TGTTATAAA GTTTATTTA True True - AAAAACCTGC TCTCGG GCAGGTTTTT TTTATAACA 72 STM3655 intergenic 3839630 3839782 - down AGCGTTCAGTTAAATAAACAAAAACCTGCTCTCGGGCAGGTTTTTTTATAACATAAATAGTATTAGTTGATTCGCTAATAATTCTGTAACTCATAGACGCGGTTATCTCTATTGATTGGCAAGAATTATTTCAGGAATACATTAACGCTGGC TTGCGGATATTTCGTTACTTCAATAAGCGTTCAGTTAAATAAACAAAAACCTGCTCTCGGGCAGGTTTTTTTATAACATAAATAGTATTAGTTGATTCGCTAATAATTCTGTAACTCATAGACGCGGTTATCTCTATTGATTGGCAAGAATTATTTCAGGAATACATTAACGCTGGCGGTACTGCCAGACTTGATGCGGGTA AGCGTTCAGTTAAATAAACAAAAACCTGCTCTCGGGCAGGTTTT 44 TTerm_0790 NC_003197.2 3870767 3870783 17 3870791 3870807 17 7 94 0 29 64 35 62 37 0 3870786 ATAAAAAGCACATCTGG CCTGATGTGCTTTTTAT True CCAGAAAAA AAAGCAACG True True - ATAAAAAGCACATCAGG AAATGAA CCAGATGTGCTTTTTAT TTTTTCTGG 82 STM3681 intergenic 3870573 3870858 + down CGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTATAAAGCAACGCAATAATTGTATTGCTTCATTTGTTATTTAATTTAACCATTT GCAGCAAAAGCTCGACCGAGGCTAACGTGTTACGCCTTATCCGGCCTGCATTGTCTACGCAGGCCCGGTAAGCGTCCGCGCCACCGGGCAAAGGCGTTACATCGCCGTGCGATAAAGTTCCACAATCTCATCGTGAGTCGCCTGAATAAGGCGCAAAGAATACGGGTGAAATTATCCTGATAACAGGTTCACGCTGGCTATTTTAAGAAGCCAGAAAAATAAAAAGCACATCTGGTTCATTTCCTGATGTGCTTTTTATAAAGCAACGCAATAATTGTATTGCTTCATTTGTTATTTAATTTAACCATTTCATTCTTTTTGCGGAAATAATAACG AAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTA 91 TTerm_0791 NC_003197.2 3870767 3870783 17 3870791 3870807 17 7 94 0 29 64 35 62 37 0 3870786 ATAAAAAGCACATCTGG CCTGATGTGCTTTTTAT True CCAGAAAAA AAAGCAACG True True - ATAAAAAGCACATCAGG AAATGAA CCAGATGTGCTTTTTAT TTTTTCTGG 82 STM3682 intergenic 3870573 3870858 - down AAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTATTTTTCTGGCTTCTTAAAATAGCCAGCGTGAACCTGTTATCAGGATAATTTCACCCGTATTCTTTGCGCCTTATTCAGGCGACTCACGATGAGATTGTGGAACTTTATCGCACGGCGATGTAACGCCTTTGCCCGGTGGCGCGGACGCTTACCGGGCCTGCGTAGACAATGCAGGCCGGATAAGGCGTAACACG CGTTATTATTTCCGCAAAAAGAATGAAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTATTTTTCTGGCTTCTTAAAATAGCCAGCGTGAACCTGTTATCAGGATAATTTCACCCGTATTCTTTGCGCCTTATTCAGGCGACTCACGATGAGATTGTGGAACTTTATCGCACGGCGATGTAACGCCTTTGCCCGGTGGCGCGGACGCTTACCGGGCCTGCGTAGACAATGCAGGCCGGATAAGGCGTAACACGTTAGCCTCGGTCGAGCTTTTGCTGC AAATGGTTAAATTAAATAACAAATGAAGCAATACAATTATTGCGTTGCTTTATAAAAAGCACATCAGGAAATGAACCAGATGTGCTTTTTA 91 TTerm_0792 NC_003197.2 3894973 3894986 14 3894994 3895008 15 7 93 6 18 41 58 42 57 0 3894989 AAACGACCAACCCG CGGGTTGGGTCGTTT True CGGGCAGAA ATGCAAACA True False - AAACGACCCAACCCG CACAGAA CGGGTTGGTCGTTT TTCTGCCCG 68 STM3700 intergenic 3894963 3895029 - down GCCGTAAGGAACTGTTTGCATAAACGACCCAACCCGCACAGAACGGGTTGGTCGTTTTCTGCCCGT GCAAGGAAGAGCTGAGTCGCCACTAGCCGTAAGGAACTGTTTGCATAAACGACCCAACCCGCACAGAACGGGTTGGTCGTTTTCTGCCCGTCTGGAGTAAGCCATGCCGTGTGAAG GCCGTAAGGAACTGTTTGCATAAACGACCCAACCCGCACAGAACGGGTTGGTCGTT 56 TTerm_0793 NC_003197.2 3902614 3902623 10 3902633 3902642 10 9 100 0 20 60 40 60 40 0 3902627 AAAAGGTTGG CCAACCTTTT True CCTAACAAA ACGATGAAA True True - AAAAGGTTGG TGTCATTCG CCAACCTTTT TTTGTTAGG 72 STM3708 intergenic 3902412 3902894 - down ATATGTATATACCCAAAATAATTCGAGTTGCTTAAAGGCGGCAAGGGAGTGAGTCCCCAGGAGCATAGATAACTATATGACTGGGGTGAACGACAAATCTGCCGGGAGCAGATTTGAACGTCGCTTGCGACGGCCCGTCAGGGCGAGGCCCATGGATGGGCCGAGTAATCCGTAGCCAACACATAAGCAACTTGAAGTATGAAGGGTATAGAGACCCGATAATTTTATCGGGTCTGATATACGTTTCATCGTAAAAGGTTGGTGTCATTCGCCAACCTTTTTTGTTAGGGAAAATCTGGAAAGCCGTAAAGAATTGTCATAGACATCAAGCATTCGTAATTGCGCTTTACTCTTATTTTACTCGCTAACGTCACGCTCTACTCTGAGTTTTGTGCTTGCTTTTTACTGTAAAAATTAATTATGGCGGCTTAATAGTTTCTTAATAGAGCCACAGTATAAAGGCAGGGTAAATTAAGGTTTTT GAAAAGTTATTCTGAGCTGGGATTAATATGTATATACCCAAAATAATTCGAGTTGCTTAAAGGCGGCAAGGGAGTGAGTCCCCAGGAGCATAGATAACTATATGACTGGGGTGAACGACAAATCTGCCGGGAGCAGATTTGAACGTCGCTTGCGACGGCCCGTCAGGGCGAGGCCCATGGATGGGCCGAGTAATCCGTAGCCAACACATAAGCAACTTGAAGTATGAAGGGTATAGAGACCCGATAATTTTATCGGGTCTGATATACGTTTCATCGTAAAAGGTTGGTGTCATTCGCCAACCTTTTTTGTTAGGGAAAATCTGGAAAGCCGTAAAGAATTGTCATAGACATCAAGCATTCGTAATTGCGCTTTACTCTTATTTTACTCGCTAACGTCACGCTCTACTCTGAGTTTTGTGCTTGCTTTTTACTGTAAAAATTAATTATGGCGGCTTAATAGTTTCTTAATAGAGCCACAGTATAAAGGCAGGGTAAATTAAGGTTTTTCTGGTAATCGTTATGAAAAATAGTA ATATGTATATACCCAAAATAATTCGAGTTGCTTAAAGGCGGCAAGGGAGTGAGTCCCCAGGAGCATAGATAACTATATGACTGGGGTGAACGACAAATCTGCCGGGAGCAGATTTGAACGTCGCTTGCGACGGCCCGTCAGGGCGAGGCCCATGGATGGGCCGAGTAATCCGTAGCCAACACATAAGCAACTTGAAGTATGAAGGGTATAGAGACCCGATAATTTTATCGGGTCTGATATACGTTTCATCGTAAAAGGTTGGTGTCATTCGCCAACCTTT 280 TTerm_0794 NC_003197.2 3909518 3909532 15 3909541 3909555 15 8 100 0 30 53 46 53 46 0 3909536 AAAACGCGCTGATAC GTATCAGCGCGTTTT True TAGATAAAA CCATCATCA True True - AAAACGCGCTGATAC CGTAATAA GTATCAGCGCGTTTT TTTTATCTA 76 STM3713 intergenic 3909516 3909573 + down AAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTTCCATCATCAGGACTCAAT TCTGCTGGCGCTAAGAAATAGATAAAAAAACGCGCTGATACTTATTACGGTATCAGCGCGTTTTCCATCATCAGGACTCAATCACTTATCAAACCAGTTTTTCATTT ATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTT 55 TTerm_0795 NC_003197.2 3909518 3909532 15 3909541 3909555 15 8 100 0 30 53 46 53 46 0 3909536 AAAACGCGCTGATAC GTATCAGCGCGTTTT True TAGATAAAA CCATCATCA True True - AAAACGCGCTGATAC CGTAATAA GTATCAGCGCGTTTT TTTTATCTA 76 STM3714 intergenic 3909516 3909573 - down ATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTTTT AAATGAAAAACTGGTTTGATAAGTGATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTTTTTTATCTATTTCTTAGCGCCAGCAGA ATTGAGTCCTGATGATGGAAAACGCGCTGATACCGTAATAAGTATCAGCGCGTTT 55 TTerm_0796 NC_003197.2 3922006 3922016 11 3922021 3922031 11 4 90 0 17 50 50 50 50 0 3922018 AAAAACCCCGC GCGAGGTTTTT True AGAAAACAA GTTACATCA True True - AAAAACCTCGC TTCG GCGGGGTTTTT TTGTTTTCT 74 STM3727 intergenic 3921963 3922050 - down ATTCTCGCTTTGATGTAACAAAAACCTCGCTTCGGCGGGGTTTTTTGTTTTCTGGCCGTCCCCATATTAATGAGACCTGCCACACAG TCTACAAAGAAGCGAAAATCAAATAATTCTCGCTTTGATGTAACAAAAACCTCGCTTCGGCGGGGTTTTTTGTTTTCTGGCCGTCCCCATATTAATGAGACCTGCCACACAGCCGGAGACGTTATGCCTGAATTACC ATTCTCGCTTTGATGTAACAAAAACCTCGCTTCGGCGGGGTTTT 44 TTerm_0797 NC_003197.2 3926665 3926673 9 3926678 3926686 9 4 100 0 18 44 55 44 55 0 3926675 AAGGCGACT AGTCGCCTT True ACAAAAAAA AAAATCAAT True False - AAGGCGACT GAAA AGTCGCCTT TTTTTTTGT 68 STM3734 intergenic 3926625 3926691 - down ATTTTAAGGCGACTGAAAAGTCGCCTTTTTTTTGTCCGTAAATTTCGTAAATGATGAAAGTAAGAA CGCAGAAGGCGGCGTTAGAAAATTGATTTTAAGGCGACTGAAAAGTCGCCTTTTTTTTGTCCGTAAATTTCGTAAATGATGAAAGTAAGAAAAGGAGCGAATCCATGAAACCGTAT ATTTTAAGGCGACTGAAAAGTCGCCT 26 TTerm_0798 NC_003197.2 3942663 3942672 10 3942679 3942688 10 6 90 0 15 15 85 11 88 0 3942675 GCGGCGGCGA TCGCCGCTGC True AAAACCCTG TGTAACGCT True False - GCAGCGGCGA ATCGTG TCGCCGCCGC CAGGGTTTT 70 STM3747 intergenic 3942655 3942766 + down AAACCCTGCGGCGGCGACACGATTCGCCGCTGCTGTAACGCTCTTTCACCATTCCTGTCTTGAGGATTGCACGCAAATCGTGCATAAATCCCCTATGTGCATTTCACGGGA GATTCTCCCGCCGGAAAAACCGTAAAAACCCTGCGGCGGCGACACGATTCGCCGCTGCTGTAACGCTCTTTCACCATTCCTGTCTTGAGGATTGCACGCAAATCGTGCATAAATCCCCTATGTGCATTTCACGGGATGGAAGACCATGAAATTGATTGGGA TCCCGTGAAATGCACATAGGGGATTTATGCACGATTTGCGTGCAATCCTCAAGACAGGAATGGTGAAAGAGCGTTACAGCAGCGGCGAATCGTGTCGCCGCCG 103 TTerm_0799 NC_003197.2 3986150 3986156 7 3986162 3986168 7 5 100 0 14 0 100 0 100 0 3986158 GCCCGGC GCCGGGC True ATAAAAAAG AAAACGTTA True False - GCCCGGC TTAAC GCCGGGC CTTTTTTAT 76 STM3787 intergenic 3986011 3986192 - down AATGTGTGCATTTGGTAACGTTTTGCCCGGCTTAACGCCGGGCTTTTTTATGCCTTGCGTTCGTCAGACAGGACATCCGGCGTCTGGCGTAAATGAAGACAAGCGTTAATAAATCACATCCTGACAGGCCAGAACGTCGACAGTTATAAATTTACCGTTATGATGGGCATCCTGTTTGGTG AAATTCAGCAAGTCAATATCGCTTAAATGTGTGCATTTGGTAACGTTTTGCCCGGCTTAACGCCGGGCTTTTTTATGCCTTGCGTTCGTCAGACAGGACATCCGGCGTCTGGCGTAAATGAAGACAAGCGTTAATAAATCACATCCTGACAGGCCAGAACGTCGACAGTTATAAATTTACCGTTATGATGGGCATCCTGTTTGGTGACGGATGTGCGCATGATTTGGTTGA AATGTGTGCATTTGGTAACGTTTTGCCCGGCTTAACGCCGGG 42 TTerm_0800 NC_003197.2 3991184 3991191 8 3991201 3991208 8 9 100 0 16 37 62 37 62 0 3991195 CGCGCTTA TAAGCGCG True AAAAAAAAC CGGCTGTTC True False - CGCGCTTA TCGTTAAGG TAAGCGCG GTTTTTTTT 56 STM3791 intergenic 3991169 3991231 - down ACCGCTCAAGGCTTGAACAGCCGCGCGCTTATCGTTAAGGTAAGCGCGTTTTTTTTATCCAT TCACCGTCACGACAGGCATTGTCTGACCGCTCAAGGCTTGAACAGCCGCGCGCTTATCGTTAAGGTAAGCGCGTTTTTTTTATCCATCAGGACAGAACCCATGATCACCGTT ACCGCTCAAGGCTTGAACAGCCGCGCGCTTATCGTTAAGGTAAGCGC 47 TTerm_0801 NC_003197.2 4009353 4009361 9 4009366 4009374 9 4 100 0 18 11 88 11 88 0 4009363 GCCCCGCCA TGGCGGGGC True TAAAAAAAG AAGGCAAGG True False - GCCCCGCCA GAGA TGGCGGGGC CTTTTTTTA 76 STM3808 intergenic 4009213 4009390 - down ATGAGCTCCTTGCCTTGCCCCGCCAGAGATGGCGGGGCTTTTTTTATGCCACGAAAAAGGGTAAGACGCTGCCGAAGTCAGGACGTCTGGGCGGTTTTCTAACATGAGAATGTGCGCCATGCTGTATATATGCCTTAACGGTTCAGTCATAATCCCTATAAATTGAAATGTTACTCA ACGAACGCTCCGCATTAAATAGCTAATGAGCTCCTTGCCTTGCCCCGCCAGAGATGGCGGGGCTTTTTTTATGCCACGAAAAAGGGTAAGACGCTGCCGAAGTCAGGACGTCTGGGCGGTTTTCTAACATGAGAATGTGCGCCATGCTGTATATATGCCTTAACGGTTCAGTCATAATCCCTATAAATTGAAATGTTACTCACAGGGAAGAAAAGATGAGTGATATC ATGAGCTCCTTGCCTTGCCCCGCCAGAGATGGCGGGG 37 TTerm_0802 NC_003197.2 4034164 4034170 7 4034176 4034182 7 5 100 0 14 28 71 28 71 0 4034172 ACCCGCA TGCGGGT True ATAAAAAAA CGTTAAGCG True False - ACCCGCA CTTGC TGCGGGT TTTTTTTAT 68 STM3831 intergenic 4033968 4034218 - down AGGCATAGTCGCCATCGGGCAAATACTCGCTTAACGACCCGCACTTGCTGCGGGTTTTTTTATGTCTTTCGTTTACGTCTTATAACGTTCCCATAACCAATTGTCGTTTTTGTGATCTAAATTGTAGTACAACATAATTGTGTTGTACTACATTAATGGCATGATAACGACGGTTGATATCACGCTAGTACTACAAAATTGCGGCGTAATTCAGCTATCGCGGTAAAGTAAGAGAGTTCACATCGAGCAC CATCCGGCCATTTCCCCGCCCGATAAGGCATAGTCGCCATCGGGCAAATACTCGCTTAACGACCCGCACTTGCTGCGGGTTTTTTTATGTCTTTCGTTTACGTCTTATAACGTTCCCATAACCAATTGTCGTTTTTGTGATCTAAATTGTAGTACAACATAATTGTGTTGTACTACATTAATGGCATGATAACGACGGTTGATATCACGCTAGTACTACAAAATTGCGGCGTAATTCAGCTATCGCGGTAAAGTAAGAGAGTTCACATCGAGCACAAGGACTCTCTATGACTCTCAATAA AGGCATAGTCGCCATCGGGCAAATACTCGCTTAACGACCCGCACTTGCTGCGGG 54 TTerm_0803 NC_003197.2 4051316 4051328 13 4051335 4051347 13 6 100 0 26 69 30 69 30 0 4051331 AAAAAACGAGCAA TTGCTCGTTTTTT True TAAAGAGTA TCATCAACG True True - AAAAAACGAGCAA TGTTTT TTGCTCGTTTTTT TACTCTTTA 76 STM3844 intergenic 4051066 4051391 + down ATAATATGGAAAATATAACAATAATAGTTTCTGATTAGAATATACTATCTAACCGGTTGAAAAAGATGCACTTCTCAACCATAATAACATCACTCTTTAGCGTTAGGCTTTGATTTATAGCCTTGTCGAGCGTTTCGCCAGACACTAACTTATTGAGTACTTTTAGGGTTGCGCTAGAAAGTTTTCTACCGATCCTAGAAGTCTCTAGGATCGGTAGAAAACTTTCTAGCGCCTCCTCTAGTAAAGAGTAAAAAACGAGCAAAAAACATTGCTCGTTTTTTTCATCAACGGAAGACAAATCAAAAATACATAACGTTTAAATCAA GAAGTCTTACAATGTAACCGTATGAATAATATGGAAAATATAACAATAATAGTTTCTGATTAGAATATACTATCTAACCGGTTGAAAAAGATGCACTTCTCAACCATAATAACATCACTCTTTAGCGTTAGGCTTTGATTTATAGCCTTGTCGAGCGTTTCGCCAGACACTAACTTATTGAGTACTTTTAGGGTTGCGCTAGAAAGTTTTCTACCGATCCTAGAAGTCTCTAGGATCGGTAGAAAACTTTCTAGCGCCTCCTCTAGTAAAGAGTAAAAAACGAGCAAAAAACATTGCTCGTTTTTTTCATCAACGGAAGACAAATCAAAAATACATAACGTTTAAATCAATGTTTGAAGAAACTATTAAAAAACA TTGATTTAAACGTTATGTATTTTTGATTTGTCTTCCGTTGATGAAAAAAACGAGCAATGTTTTTTGCTCGTTTTT 75 TTerm_0804 NC_003197.2 4069004 4069012 9 4069017 4069025 9 4 100 0 18 33 66 33 66 0 4069014 AAGGCCGTC GACGGCCTT True CACAAAAAA CTGCCTGGT True False - AAGGCCGTC GACA GACGGCCTT TTTTTTGTG 76 STM3860 intergenic 4068897 4069048 + down AGAAGAGAATGTGACCGGGTGCCCGTAGCGCAGGCAGGCGTAGCACCTCTTAGTCGCTCTTCAGCCACCATAGAGAAAGAACAGCGCCTGTCACAGCGCACAAAAAAAGGCCGTCTGTCGACGGCCTTCTGCCTGGTACTACATTTGTACT CACCTGGATTGAGCCAGGGCCTTAAAGAAGAGAATGTGACCGGGTGCCCGTAGCGCAGGCAGGCGTAGCACCTCTTAGTCGCTCTTCAGCCACCATAGAGAAAGAACAGCGCCTGTCACAGCGCACAAAAAAAGGCCGTCTGTCGACGGCCTTCTGCCTGGTACTACATTTGTACTTACTCTACGGTAACCGATTTCGCCA AGTACAAATGTAGTACCAGGCAGAAGGCCGTCGACAGACGGCCT 44 TTerm_0805 NC_003197.2 4069004 4069012 9 4069017 4069025 9 4 100 0 18 33 66 33 66 0 4069014 AAGGCCGTC GACGGCCTT True CACAAAAAA CTGCCTGGT True False - AAGGCCGTC GACA GACGGCCTT TTTTTTGTG 76 STM3861 intergenic 4068897 4069048 - down AGTACAAATGTAGTACCAGGCAGAAGGCCGTCGACAGACGGCCTTTTTTTGTGCGCTGTGACAGGCGCTGTTCTTTCTCTATGGTGGCTGAAGAGCGACTAAGAGGTGCTACGCCTGCCTGCGCTACGGGCACCCGGTCACATTCTCTTCT TGGCGAAATCGGTTACCGTAGAGTAAGTACAAATGTAGTACCAGGCAGAAGGCCGTCGACAGACGGCCTTTTTTTGTGCGCTGTGACAGGCGCTGTTCTTTCTCTATGGTGGCTGAAGAGCGACTAAGAGGTGCTACGCCTGCCTGCGCTACGGGCACCCGGTCACATTCTCTTCTTTAAGGCCCTGGCTCAATCCAGGTG AGTACAAATGTAGTACCAGGCAGAAGGCCGTCGACAGACGGCCT 44 TTerm_0806 NC_003197.2 4072708 4072717 10 4072726 4072735 10 8 100 0 20 50 50 50 50 0 4072721 AAAACCAGCG CGCTGGTTTT True GAAAAGCAA CCGTTGCGC True True - AAAACCAGCG GCCTCTGT CGCTGGTTTT TTGCTTTTC 80 STM3863 intergenic 4072513 4072756 - down AGTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTTTTGCTTTTCTGACTCCCCTGCGCTTTATTACGTTATCTTCTTTATTTATGGAGTAAAAAAACAGCAAAAACATCGGACTACGTTGCCAATACGCGGGTGTTTTTACTTTTCAGGAGACAAGAGGCGCGGTAATGAACGAAAATGATTCATTAGCAGGCGGGGATTTTATCCCGGTGAGCGTTTTATCCTTCTTCC TGCGGATTTTTATGTCGCGTAATTAAGTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTTTTGCTTTTCTGACTCCCCTGCGCTTTATTACGTTATCTTCTTTATTTATGGAGTAAAAAAACAGCAAAAACATCGGACTACGTTGCCAATACGCGGGTGTTTTTACTTTTCAGGAGACAAGAGGCGCGGTAATGAACGAAAATGATTCATTAGCAGGCGGGGATTTTATCCCGGTGAGCGTTTTATCCTTCTTCCATTTTACGATGAAAAAAATGTAGTA AGTAAAAAATACGCGCAACGGAAAACCAGCGGCCTCTGTCGCTGGTTT 48 TTerm_0807 NC_003197.2 4073639 4073648 10 4073657 4073666 10 8 100 0 20 60 40 60 40 0 4073652 AAAACCAGTC GACTGGTTTT True GATAAAAAA ATGCTTTCA True True - AAAACCAGTC TGATTGCG GACTGGTTTT TTTTTTATC 72 STM3864 intergenic 4073460 4073684 - down ACACCGGCTTGAAAGCATAAAACCAGTCTGATTGCGGACTGGTTTTTTTTTATCCTCTCAATTTTTATTCGATAAACTAGCAACGACAAAAACAAGCGGCTGAAGGCGACGCGTTTTCAGCGACAGCGCTGTTTTCATTAAATCCTTCTTTCTGTCATTGGCATCTGCACATTGTGCGAAGAAGGGAGGAATGGATGCGTTTTTATTGCATAAAATGAGGGATT TCGAGTTGACCAAAAAAGCGATGTAACACCGGCTTGAAAGCATAAAACCAGTCTGATTGCGGACTGGTTTTTTTTTATCCTCTCAATTTTTATTCGATAAACTAGCAACGACAAAAACAAGCGGCTGAAGGCGACGCGTTTTCAGCGACAGCGCTGTTTTCATTAAATCCTTCTTTCTGTCATTGGCATCTGCACATTGTGCGAAGAAGGGAGGAATGGATGCGTTTTTATTGCATAAAATGAGGGATTATTACTATGTCATTTCAGCCATCCT ACACCGGCTTGAAAGCATAAAACCAGTCTGATTGCGGACTGGTTT 45 TTerm_0808 NC_003197.2 4101881 4101898 18 4101903 4101920 18 4 88 0 26 69 30 75 25 0 4101900 AATATCTCAAAACTGACT AGTCACGTTTGAGATATT True CCTGCCTTA TGCTCTTTA True False - AATATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATATT TAAGGCAGG 76 STM3890 intergenic 4101844 4102041 + down CCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGACGATGAATCGAAAGAAACATCTTCGGGTTGTGAG AGGGGTTCGAATCCCCTAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGACGATGAATCGAAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CTCACAACCCGAAGATGTTTCTTTCGATTCATCGTCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACGTGACTCGTAAGTCAGTTTTGAGATAT 160 TTerm_0809 NC_003197.2 4105500 4105509 10 4105516 4105525 10 6 100 0 20 70 30 70 30 0 4105512 ATTACCTGAT ATCAGGTAAT True TGCCTAAAA CGTAAGTTC True False - ATTACCTGAT CAGATA ATCAGGTAAT TTTTAGGCA 64 STM3896 intergenic 4105453 4105558 + down CCAGAAATAATCCTTAGCATCTGCTAAGGATTTTTTTTTGCCTAAAATTACCTGATTATCTGATCAGGTAATCGTAAGTTCCCTTCTTTTTCTTTTCATCATTTT GGGAGTTCGAGTCTCTCCGCCCCTGCCAGAAATAATCCTTAGCATCTGCTAAGGATTTTTTTTTGCCTAAAATTACCTGATTATCTGATCAGGTAATCGTAAGTTCCCTTCTTTTTCTTTTCATCATTTTCATTGTTCATCCAGCACATCCGTTT AAAATGATGAAAAGAAAAAGAAGGGAACTTACGATTACCTGATCAGATAATCAGGTAA 58 TTerm_0810 NC_003197.2 4105500 4105509 10 4105516 4105525 10 6 100 0 20 70 30 70 30 0 4105512 ATTACCTGAT ATCAGGTAAT True TGCCTAAAA CGTAAGTTC True False - ATTACCTGAT CAGATA ATCAGGTAAT TTTTAGGCA 64 STM3897 intergenic 4105453 4105558 - down AAAATGATGAAAAGAAAAAGAAGGGAACTTACGATTACCTGATCAGATAATCAGGTAATTTTAGGCAAAAAAAAATCCTTAGCAGATGCTAAGGATTATTTCTGG AAACGGATGTGCTGGATGAACAATGAAAATGATGAAAAGAAAAAGAAGGGAACTTACGATTACCTGATCAGATAATCAGGTAATTTTAGGCAAAAAAAAATCCTTAGCAGATGCTAAGGATTATTTCTGGCAGGGGCGGAGAGACTCGAACTCCC AAAATGATGAAAAGAAAAAGAAGGGAACTTACGATTACCTGATCAGATAATCAGGTAA 58 TTerm_0811 NC_003197.2 4106853 4106861 9 4106867 4106875 9 5 100 0 18 55 44 55 44 0 4106863 AAAAAGGGC GCCCTTTTT True TGATTAATA TTACGCCAA True True - AAAAAGGGC ATTAC GCCCTTTTT TATTAATCA 68 STM3898 intergenic 4106851 4106876 + down TAAAAAGGGCGTAATGCCCTTTTTT AGACTACACCGAAGCTGATGATTAATAAAAAGGGCGTAATGCCCTTTTTTTACGCCAACAGCTTTTGCAAATGAA AAAAAAGGGCATTACGCCCTTTT 23 TTerm_0812 NC_003197.2 4106853 4106861 9 4106867 4106875 9 5 100 0 18 55 44 55 44 0 4106863 AAAAAGGGC GCCCTTTTT True TGATTAATA TTACGCCAA True True - AAAAAGGGC ATTAC GCCCTTTTT TATTAATCA 68 STM3899 intergenic 4106851 4106876 - down AAAAAAGGGCATTACGCCCTTTTTA TTCATTTGCAAAAGCTGTTGGCGTAAAAAAAGGGCATTACGCCCTTTTTATTAATCATCAGCTTCGGTGTAGTCT AAAAAAGGGCATTACGCCCTTTT 23 TTerm_0813 NC_003197.2 4126872 4126883 12 4126888 4126899 12 4 100 0 24 50 50 50 50 0 4126885 AAAACGCCACGT ACGTGGCGTTTT True TTTACCTGA TGTTTTGCG True True - AAAACGCCACGT AAAA ACGTGGCGTTTT TCAGGTAAA 80 STM3917 intergenic 4126856 4127086 + down CCTGGTCTTTACCTGAAAACGCCACGTTTTTACGTGGCGTTTTTGTTTTGCGATTCATCCTGGCGTCATGTCATATAAACTGGTCATCGGGATATGCGCTACAGAGTAACACCATGCACAATACACATTGTTTGCGGTAAAAAGTGTAATGTTCTAACAGGTCTCTTCTAGGAGCTGGCGTAACGCATTATACTTTAAGGAAATGATATATGCTGAGAGCACATACACTG TTTCGAGATGATGAAGCGCTCATAACCTGGTCTTTACCTGAAAACGCCACGTTTTTACGTGGCGTTTTTGTTTTGCGATTCATCCTGGCGTCATGTCATATAAACTGGTCATCGGGATATGCGCTACAGAGTAACACCATGCACAATACACATTGTTTGCGGTAAAAAGTGTAATGTTCTAACAGGTCTCTTCTAGGAGCTGGCGTAACGCATTATACTTTAAGGAAATGATATATGCTGAGAGCACATACACTGTGAAGTTACTCACCGCTTTATCTGA CAGTGTATGTGCTCTCAGCATATATCATTTCCTTAAAGTATAATGCGTTACGCCAGCTCCTAGAAGAGACCTGTTAGAACATTACACTTTTTACCGCAAACAATGTGTATTGTGCATGGTGTTACTCTGTAGCGCATATCCCGATGACCAGTTTATATGACATGACGCCAGGATGAATCGCAAAACAAAAACGCCACGTAAAAACGTGGCGTTT 214 TTerm_0814 NC_003197.2 4185139 4185144 6 4185152 4185157 6 7 100 0 12 33 66 33 66 0 4185147 TGTCGG CCGACA True TTGAAAAAT CCCGACAGA True False - TGTCGG GTCAATA CCGACA ATTTTTCAA 56 STM3978 intergenic 4185089 4185165 + down CTGAAAGCGGACATCGACATTTCAGGCTGCGGCGACTCAGCTTGAAAAATGTCGGTATTGACCCGACACCCGACAG GGATGAGCTGGCTATCTTTAAATAACTGAAAGCGGACATCGACATTTCAGGCTGCGGCGACTCAGCTTGAAAAATGTCGGTATTGACCCGACACCCGACAGAGGGAGCGCATGACAACCTTAAGCT CTGTCGGGTGTCGGGTCAATACCGAC 26 TTerm_0815 NC_003197.2 4187976 4187982 7 4187988 4187994 7 5 100 0 14 0 100 0 100 0 4187984 CCCGCCC GGGCGGG True TGAAAAAAC AAAAACGGC True False - CCCGCCC GTCAG GGGCGGG GTTTTTTCA 76 STM3981 intergenic 4187953 4188150 + down AGCAGGCCATACGGTGAAAAAACCCGCCCCTGACGGGCGGGAAAAACGGCAACTAAACTGTTTCCCGTCATAATTCGCGCAGCCTCTTTGTTGGCTGCCTTTGCTCACCCCGGGCACATAGTTATCTATGTGCCCGGGGATTCGCTCAGTTGCCGCTGCGCTGCAATGCGAGTTATTTAGGGGATATTATCTTTGAT CCTGACCAAAGCGCTTACTGAGTAGAGCAGGCCATACGGTGAAAAAACCCGCCCCTGACGGGCGGGAAAAACGGCAACTAAACTGTTTCCCGTCATAATTCGCGCAGCCTCTTTGTTGGCTGCCTTTGCTCACCCCGGGCACATAGTTATCTATGTGCCCGGGGATTCGCTCAGTTGCCGCTGCGCTGCAATGCGAGTTATTTAGGGGATATTATCTTTGATTAAACCCGCTCAAACACCGTGGCGA ATCAAAGATAATATCCCCTAAATAACTCGCATTGCAGCGCAGCGGCAACTGAGCGAATCCCCGGGCACATAGATAACTATGTGCCCGGGGTGAGCAAAGGCAGCCAACAAAGAGGCTGCGCGAATTATGACGGGAAACAGTTTAGTTGCCGTTTTTCCCGCCCGTCAGGGGCGG 174 TTerm_0816 NC_003197.2 4187976 4187982 7 4187988 4187994 7 5 100 0 14 0 100 0 100 0 4187984 CCCGCCC GGGCGGG True TGAAAAAAC AAAAACGGC True False - CCCGCCC GTCAG GGGCGGG GTTTTTTCA 76 STM3982 intergenic 4187953 4188150 - down ATCAAAGATAATATCCCCTAAATAACTCGCATTGCAGCGCAGCGGCAACTGAGCGAATCCCCGGGCACATAGATAACTATGTGCCCGGGGTGAGCAAAGGCAGCCAACAAAGAGGCTGCGCGAATTATGACGGGAAACAGTTTAGTTGCCGTTTTTCCCGCCCGTCAGGGGCGGGTTTTTTCACCGTATGGCCTGCT TCGCCACGGTGTTTGAGCGGGTTTAATCAAAGATAATATCCCCTAAATAACTCGCATTGCAGCGCAGCGGCAACTGAGCGAATCCCCGGGCACATAGATAACTATGTGCCCGGGGTGAGCAAAGGCAGCCAACAAAGAGGCTGCGCGAATTATGACGGGAAACAGTTTAGTTGCCGTTTTTCCCGCCCGTCAGGGGCGGGTTTTTTCACCGTATGGCCTGCTCTACTCAGTAAGCGCTTTGGTCAGG ATCAAAGATAATATCCCCTAAATAACTCGCATTGCAGCGCAGCGGCAACTGAGCGAATCCCCGGGCACATAGATAACTATGTGCCCGGGGTGAGCAAAGGCAGCCAACAAAGAGGCTGCGCGAATTATGACGGGAAACAGTTTAGTTGCCGTTTTTCCCGCCCGTCAGGGGCGG 174 TTerm_0817 NC_003197.2 4197968 4197985 18 4197992 4198009 18 6 77 0 16 58 41 57 42 0 4197988 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True - AAAACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTATT TTTTTCGTA 56 STM3990 intergenic 4197943 4198129 + down CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG TGCGGTTCGATCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCCTTTCAGGTACACTCTGAAGTAT 161 TTerm_0818 NC_003197.2 4201435 4201457 23 4201462 4201484 23 4 86 0 31 54 45 55 45 0 4201459 CAAATAAAACGAAGGGCCCTGTC GACAGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True - CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG GATGCCTGG 94 STM3992 intergenic 4201436 4201697 + down AATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCC GAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAGGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATTAGTTTAGTGAAGAAGCCCATCCTGACGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAACCGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCGGCACTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAAGGAACGTGCTTTCTCTAACC GGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATTT 262 TTerm_0819 NC_003197.2 4201435 4201457 23 4201462 4201484 23 4 86 0 31 54 45 55 45 0 4201459 CAAATAAAACGAAGGGCCCTGTC GACAGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True - CAGATAAAACAAAAGGCCCTGTC TTCC GACAGGGCCCTTCGTTTTATTTG GATGCCTGG 94 STM3993 intergenic 4201436 4201697 - down GGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATT GGTTAGAGAAAGCACGTTCCTTGTAGGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATTTGATGCCTGGCAGTTCCCTACTCTC GGCCGGATAAGGCGGAGCCGCCATCCGGCAGTGCCGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACGGTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCGTCAGGATGGGCTTCTTCACTAAACTAATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCTGTCTTCCGACAGGGCCCTTCGTTTTATTT 262 TTerm_0820 NC_003197.2 4210374 4210391 18 4210396 4210413 18 4 94 0 31 58 41 58 41 0 4210393 AAGAAAAAAGGCGGCAGA TCTGTCGCCTTTTTTCTT True CGTGAGTCA TGCTTGCTT True True - AAGAAAAAAGGCGACAGA GTAA TCTGCCGCCTTTTTTCTT TGACTCACG 86 STM4002 intergenic 4210361 4210480 + down GGGTCGTGAGTCAAGAAAAAAGGCGGCAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGCTAGATTCCGCCTCAATTCTATACTGAATAAAACGGCTTAAAGATCTGACATCA CAACAGGGATGGTGGAACCCGTTAAGGGTCGTGAGTCAAGAAAAAAGGCGGCAGATTACTCTGTCGCCTTTTTTCTTTGCTTGCTTTCTGCTAGATTCCGCCTCAATTCTATACTGAATAAAACGGCTTAAAGATCTGACATCATGAAAAAACCAACCTCTGCACCGCG TGATGTCAGATCTTTAAGCCGTTTTATTCAGTATAGAATTGAGGCGGAATCTAGCAGAAAGCAAGCAAAGAAAAAAGGCGACAGAGTAATCTGCCGCCTTTTTTCT 106 TTerm_0821 NC_003197.2 4219238 4219251 14 4219261 4219274 14 9 92 0 23 46 53 46 53 0 4219255 AAAAACCCTGCCGA TCGGCGGGGTTTTT True TTACGGATA TTATTCACG True True - AAAAACCCCGCCGA GCTTTCATT TCGGCAGGGTTTTT TATCCGTAA 86 STM4009 intergenic 4219220 4219275 + down TTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTTT GAACCGTGGTCAGAAAGAAGAGTAATTAACGCTCTTACGGATAAAAACCCTGCCGAAATGAAAGCTCGGCGGGGTTTTTTTATTCACGTTGAGAAAGGGATAAGG AAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTT 37 TTerm_0822 NC_003197.2 4219238 4219251 14 4219261 4219274 14 9 92 0 23 46 53 46 53 0 4219255 AAAAACCCTGCCGA TCGGCGGGGTTTTT True TTACGGATA TTATTCACG True True - AAAAACCCCGCCGA GCTTTCATT TCGGCAGGGTTTTT TATCCGTAA 86 STM4010 intergenic 4219220 4219275 - down AAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTTTATCCGTAAGAGCGTTAA CCTTATCCCTTTCTCAACGTGAATAAAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTTTATCCGTAAGAGCGTTAATTACTCTTCTTTCTGACCACGGTTC AAAAAACCCCGCCGAGCTTTCATTTCGGCAGGGTTTT 37 TTerm_0823 NC_003197.2 4227218 4227224 7 4227229 4227235 7 4 100 0 14 28 71 28 71 0 4227226 AACGCCC GGGCGTT True CCTCTCAAA ATATTTTAT True True - AACGCCC TGCG GGGCGTT TTTGAGAGG 68 STM4018 intergenic 4227213 4227250 - down ACAACAATAAAATATAACGCCCTGCGGGGCGTTTTGA TTGAGGCCCGGAAACATACGGTTTAACAACAATAAAATATAACGCCCTGCGGGGCGTTTTGAGAGGCGATTATGTCTAATCATGATC ACAACAATAAAATATAACGCCCTGCGGGGCGT 32 TTerm_0824 NC_003197.2 4251500 4251509 10 4251515 4251524 10 5 100 0 20 50 50 50 50 0 4251511 AAAAAGCGCC GGCGCTTTTT True ACGCCAATA TCGTTCATG True True - AAAAAGCGCC TGATC GGCGCTTTTT TATTGGCGT 80 STM4040 intergenic 4251434 4251789 + down GTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTTTCGTTCATGTATTCTTCATCAGGCAATATCCGTAAAAATAGCTGACGTAAACATTAACTAAAGAGAGTTATTAGAAAAACCAGTAATCTGAAGCTATCACAAGATGTTGACGTCACGCTGGAAGGTACTGGTAGTGTCATTGAGGATCGGCATTTATATGGAAAGCATTTATCCCCCTGATGCGAAAATTCTGAGCTACTTCAGCATAGGGCGGCCCAGCCTTCATCACTTATAGGGTGTCACGTCCAACTGTTCTGTAAGACGT GGATGATTATAACCGCCTGCGTTGAGTGACGGCACATTAACTGCGCACAGGCTGGCGCAAGTGCCTATAAAATTACGCGATAACGCCAATAAAAAGCGCCGATCAGGCGCTTTTTTCGTTCATGTATTCTTCATCAGGCAATATCCGTAAAAATAGCTGACGTAAACATTAACTAAAGAGAGTTATTAGAAAAACCAGTAATCTGAAGCTATCACAAGATGTTGACGTCACGCTGGAAGGTACTGGTAGTGTCATTGAGGATCGGCATTTATATGGAAAGCATTTATCCCCCTGATGCGAAAATTCTGAGCTACTTCAGCATAGGGCGGCCCAGCCTTCATCACTTATAGGGTGTCACGTCCAACTGTTCTGTAAGACGTTAATTAATACCTGCCAGCCGCAACA ACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTT 289 TTerm_0825 NC_003197.2 4251500 4251509 10 4251515 4251524 10 5 100 0 20 50 50 50 50 0 4251511 AAAAAGCGCC GGCGCTTTTT True ACGCCAATA TCGTTCATG True True - AAAAAGCGCC TGATC GGCGCTTTTT TATTGGCGT 80 STM4041 intergenic 4251434 4251789 - down ACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTTTATTGGCGTTATCGCGTAATTTTATAGGCACTTGCGCCAGCCTGTGCGCAGTTAATGTGCCGTCAC TGTTGCGGCTGGCAGGTATTAATTAACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTTTATTGGCGTTATCGCGTAATTTTATAGGCACTTGCGCCAGCCTGTGCGCAGTTAATGTGCCGTCACTCAACGCAGGCGGTTATAATCATCC ACGTCTTACAGAACAGTTGGACGTGACACCCTATAAGTGATGAAGGCTGGGCCGCCCTATGCTGAAGTAGCTCAGAATTTTCGCATCAGGGGGATAAATGCTTTCCATATAAATGCCGATCCTCAATGACACTACCAGTACCTTCCAGCGTGACGTCAACATCTTGTGATAGCTTCAGATTACTGGTTTTTCTAATAACTCTCTTTAGTTAATGTTTACGTCAGCTATTTTTACGGATATTGCCTGATGAAGAATACATGAACGAAAAAAGCGCCTGATCGGCGCTTTT 289 TTerm_0826 NC_003197.2 4268360 4268369 10 4268374 4268383 10 4 100 0 20 30 70 30 70 0 4268371 ATCGGCCTGC GCAGGCCGAT True GATAAAAAA GGTTTTTAG True True - ATCGGCCTGC GAAT GCAGGCCGAT TTTTTTATC 80 STM4057 intergenic 4268338 4268389 + down ATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGATGGTTTT TCTGGTGCCGGAAATCTCCCGGTAAATCTCGACGGCGAGATAAAAAATCGGCCTGCATTCGCAGGCCGATGGTTTTTAGGTTCGCTTGTACAGCGGTAGCC AAAACCATCGGCCTGCGAATGCAGGCCGA 29 TTerm_0827 NC_003197.2 4268360 4268369 10 4268374 4268383 10 4 100 0 20 30 70 30 70 0 4268371 ATCGGCCTGC GCAGGCCGAT True GATAAAAAA GGTTTTTAG True True - ATCGGCCTGC GAAT GCAGGCCGAT TTTTTTATC 80 STM4058 intergenic 4268338 4268389 - down AAAACCATCGGCCTGCGAATGCAGGCCGATTTTTTATCTCGCCGTCGAGAT GGCTACCGCTGTACAAGCGAACCTAAAAACCATCGGCCTGCGAATGCAGGCCGATTTTTTATCTCGCCGTCGAGATTTACCGGGAGATTTCCGGCACCAGA AAAACCATCGGCCTGCGAATGCAGGCCGA 29 TTerm_0828 NC_003197.2 4275450 4275458 9 4275463 4275471 9 4 88 0 13 83 16 87 12 0 4275460 AAAGATATA TATACCTTT True ATCGATCAA ATATCTTTT True True - AAAGGTATA CCTT TATATCTTT TTGATCGAT 42 STM4064 intergenic 4275354 4275610 + down TTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAAT TTGCGCCATTTTGTCTTCCCGCTGATTTTCGTTACACCCCCTGTTCATTATCTTATTGATTCTTATCCCGGTTTAAAACCGGGGTAAGATCGTGTCTATAAAAATATGTGAAATCGATCAAAAGATATAAAGGTATACCTTTATATCTTTTGATGGTTAGTTACACTCTCTTCATAGCCTCCATAGATTGTCTGGTGGATGGCTTATATAAAAACGTTTTTATTTCATGTAGTGACATCATTAATTGTTCACCAGATTTGCGCTGTTAAGCGTAAAGGAATATCAACATGAAACTTTCTATCGTGG ATTCCTTTACGCTTAACAGCGCAAATCTGGTGAACAATTAATGATGTCACTACATGAAATAAAAACGTTTTTATATAAGCCATCCACCAGACAATCTATGGAGGCTATGAAGAGAGTGTAACTAACCATCAAAAGATATAAAGGTATACCTTTATATCTT 160 TTerm_0829 NC_003197.2 4297559 4297570 12 4297575 4297586 12 4 100 0 24 50 50 50 50 0 4297572 AAAAAAGGCGCC GGCGCCTTTTTT True CAACGCATA GATCACTCG True True - AAAAAAGGCGCC GTAA GGCGCCTTTTTT TATGCGTTG 96 STM4088 intergenic 4297367 4297589 + down TCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTTGAT GCTTGGTCGTATGGAAGAAGTCTAATCCTCGTCATATTTCACGTTATGGCGGCGTTGGCTGCGTGCGTTCACCCCAGTCACATAGTGGCCTATGCTCCTGGGGATTCACTTACTTGCCGCCTTGCCCTGACGCGAAATCTATAGAGGATTTAGAATGCGGATACCGGTGGGCCGGATAAGGCGTAAGCTGCCATCCGGCAATCAGCGACAACGCATAAAAAAGGCGCCTTACGGCGCCTTTTTTGATCACTCGATATCAAGCGGGTCTTCGG ATCAAAAAAGGCGCCGTAAGGCGCCTTTTT 30 TTerm_0830 NC_003197.2 4297559 4297570 12 4297575 4297586 12 4 100 0 24 50 50 50 50 0 4297572 AAAAAAGGCGCC GGCGCCTTTTTT True CAACGCATA GATCACTCG True True - AAAAAAGGCGCC GTAA GGCGCCTTTTTT TATGCGTTG 96 STM4089 intergenic 4297367 4297589 - down ATCAAAAAAGGCGCCGTAAGGCGCCTTTTTTATGCGTTGTCGCTGATTGCCGGATGGCAGCTTACGCCTTATCCGGCCCACCGGTATCCGCATTCTAAATCCTCTATAGATTTCGCGTCAGGGCAAGGCGGCAAGTAAGTGAATCCCCAGGAGCATAGGCCACTATGTGACTGGGGTGAACGCACGCAGCCAACGCCGCCATAACGTGAAATATGACGAGGA CCGAAGACCCGCTTGATATCGAGTGATCAAAAAAGGCGCCGTAAGGCGCCTTTTTTATGCGTTGTCGCTGATTGCCGGATGGCAGCTTACGCCTTATCCGGCCCACCGGTATCCGCATTCTAAATCCTCTATAGATTTCGCGTCAGGGCAAGGCGGCAAGTAAGTGAATCCCCAGGAGCATAGGCCACTATGTGACTGGGGTGAACGCACGCAGCCAACGCCGCCATAACGTGAAATATGACGAGGATTAGACTTCTTCCATACGACCAAGC ATCAAAAAAGGCGCCGTAAGGCGCCTTTTT 30 TTerm_0831 NC_003197.2 4299114 4299121 8 4299126 4299133 8 4 100 0 16 37 62 37 62 0 4299123 ATGGGGCT AGCCCCAT True CAATAAAAA CAACAGTGA True False - ATGGGGCT GAAA AGCCCCAT TTTTTATTG 72 STM4091 intergenic 4299108 4299163 - down ATCGCGTCCAATGCATTTTCATCACTGTTGATGGGGCTGAAAAGCCCCATTTTTA AAGATCTAAGCCGTTTTATCTTATAATCGCGTCCAATGCATTTTCATCACTGTTGATGGGGCTGAAAAGCCCCATTTTTATTGGCGCTAAATATGACTGAACAAC ATCGCGTCCAATGCATTTTCATCACTGTTGATGGGGCTGAAAAGCCCCA 49 TTerm_0832 NC_003197.2 4306001 4306012 12 4306017 4306028 12 4 100 0 24 58 41 58 41 0 4306014 AAAAAAAGCGCC GGCGCTTTTTTT True CCGCCAGAA GTTTTCTAG True True - AAAAAAAGCGCC CTGC GGCGCTTTTTTT TTCTGGCGG 88 STM4096 intergenic 4305988 4306034 + down GTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTTGTTTTC CTTCAGCATCCCTGGCAGCAAATAAGTTACCGCCAGAAAAAAAAGCGCCGCAGGGCGCTTTTTTTGTTTTCTAGGGATAACAGTATTTGTTCAGAC GAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTT 33 TTerm_0833 NC_003197.2 4306001 4306012 12 4306017 4306028 12 4 100 0 24 58 41 58 41 0 4306014 AAAAAAAGCGCC GGCGCTTTTTTT True CCGCCAGAA GTTTTCTAG True True - AAAAAAAGCGCC CTGC GGCGCTTTTTTT TTCTGGCGG 88 STM4097 intergenic 4305988 4306034 - down GAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTTTTCTGGCGGTAAC GTCTGAACAAATACTGTTATCCCTAGAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTTTTCTGGCGGTAACTTATTTGCTGCCAGGGATGCTGAAG GAAAACAAAAAAAGCGCCCTGCGGCGCTTTTTT 33 TTerm_0834 NC_003197.2 4309110 4309118 9 4309124 4309132 9 5 88 0 13 27 72 25 75 0 4309120 GCGGCCAGA TCTGACCGC True AAAAAAGCG ATGCTTTGC True False - GCGGTCAGA ACGCC TCTGGCCGC CGCTTTTTT 50 STM4099 intergenic 4308692 4309144 - down ATAGCAAAGCATGCGGTCAGAACGCCTCTGGCCGCGCTTTTTTAACGATTCCCCTTGTACACGGCTATCTCCGACATTGTTCTAAATGTTCATCTTCCCGAATAACCCTCGGTGGATAAATTTGTCAGACATGATAAGTTTCTCTTCGTTATTTTCCTGGAAAAAATTCCCGGCATGTTATAACCGATATAATTTTATTATATTTAAACTTCTAATATTTATTTAATGTTTCACGTAGCAAAGCGCATATGAATAATAATACAGCGCCATATATTTACTGAACAAATAGTATAACAATGAGTATTGTTAAAAAGACTATGGACACCTCATATTTGTGACCAACATCATTATTCCCCTCCGCGGATTGTTTTACTTTTTTAAATGTTTTTTCATCTCCGATAAATAAGAAGGTTAATATACATTCATTTTATCGATAATATCGAATGGGGAAA TTGATCCGGAAACGTGGGAATACTGATAGCAAAGCATGCGGTCAGAACGCCTCTGGCCGCGCTTTTTTAACGATTCCCCTTGTACACGGCTATCTCCGACATTGTTCTAAATGTTCATCTTCCCGAATAACCCTCGGTGGATAAATTTGTCAGACATGATAAGTTTCTCTTCGTTATTTTCCTGGAAAAAATTCCCGGCATGTTATAACCGATATAATTTTATTATATTTAAACTTCTAATATTTATTTAATGTTTCACGTAGCAAAGCGCATATGAATAATAATACAGCGCCATATATTTACTGAACAAATAGTATAACAATGAGTATTGTTAAAAAGACTATGGACACCTCATATTTGTGACCAACATCATTATTCCCCTCCGCGGATTGTTTTACTTTTTTAAATGTTTTTTCATCTCCGATAAATAAGAAGGTTAATATACATTCATTTTATCGATAATATCGAATGGGGAAATAAATATGTTATTTACAAGGAAAGT ATAGCAAAGCATGCGGTCAGAACGCCTCTGGCCG 34 TTerm_0835 NC_003197.2 4322527 4322535 9 4322543 4322551 9 7 88 0 13 72 27 75 25 0 4322538 AGTCTATTT AAATGGACT True GATAAAAAA GATTCCAGG True False - AGTCCATTT TGTCCTG AAATAGACT TTTTTTATC 42 STM4108 intergenic 4322463 4322716 - down AGGTCTGAGCAATACTCCTGACGATAGTCAGGAGTATTTCAGCTTGCTGACCCAACAGAATTCAGTTGCCGAATATCGACACAGGCACCTTATCTGGCCTTGTTATCCAATCATCCAGGCCGGGTAAGCGAAGCGCCATCATCAGGTATTCCATAGCCTGGAATCAGTCCATTTTGTCCTGAAATAGACTTTTTTATCACGCACCATTCTCTCCGCGGAAAGTCAAATGACGTACTGACACACTTCACGGACG AACGCTTCTTGCAGGAATGGGAATAAGGTCTGAGCAATACTCCTGACGATAGTCAGGAGTATTTCAGCTTGCTGACCCAACAGAATTCAGTTGCCGAATATCGACACAGGCACCTTATCTGGCCTTGTTATCCAATCATCCAGGCCGGGTAAGCGAAGCGCCATCATCAGGTATTCCATAGCCTGGAATCAGTCCATTTTGTCCTGAAATAGACTTTTTTATCACGCACCATTCTCTCCGCGGAAAGTCAAATGACGTACTGACACACTTCACGGACGAAGAAGATGAAATTCGCACAGGCGC AGGTCTGAGCAATACTCCTGACGATAGTCAGGAGTATTTCAGCTTGCTGACCCAACAGAATTCAGTTGCCGAATATCGACACAGGCACCTTATCTGGCCTTGTTATCCAATCATCCAGGCCGGGTAAGCGAAGCGCCATCATCAGGTATTCCATAGCCTGGAATCAGTCCATTTTGTCCTGAAATAGAC 189 TTerm_0836 NC_003197.2 4353039 4353056 18 4353063 4353080 18 6 77 0 16 58 41 57 42 0 4353059 AATACTTCAGAGTGTACC GGTTCACTGCGAAGTTTT True TACGAAAAA GCTCTTTAA True True - AAAACTTCGCAGTGAACC CTTTCA GGTACACTCTGAAGTATT TTTTTCGTA 56 STM4134 intergenic 4353014 4353200 + down CCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG TGCGGTTCGATCCCGCATAGCTCCACCATCTCGTGAGTGTTTACGAAAAAATACTTCAGAGTGTACCTGAAAGGGTTCACTGCGAAGTTTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCCTTTCAGGTACACTCTGAAGTAT 161 TTerm_0837 NC_003197.2 4356511 4356528 18 4356533 4356550 18 4 94 0 31 52 47 52 47 0 4356530 AAAACGAAAGGCCCTGTC GACAGGGCCTTTTGTTTT True CATCAAATA TGTCTGTTT True True - AAAACAAAAGGCCCTGTC TTCC GACAGGGCCTTTCGTTTT TATTTGATG 94 STM4136 intergenic 4356506 4356672 + down AAATAAAACGAAAGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGGACGCGCCGATCTACCCTCATTATAACCACAAGCCTTCCCAACACAGATACGGTAAACTATTGCCGATTGAGTATC CGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCCCTGTCGGAAGACAGGGCCTTTTGTTTTTGTCTGTTTCTGCCGGATGGCGGCTCCGCCTTATCCGGCCTACAGGGACGCGCCGATCTACCCTCATTATAACCACAAGCCTTCCCAACACAGATACGGTAAACTATTGCCGATTGAGTATCAGGAAAGCAGCCATGACCCACTCCC GATACTCAATCGGCAATAGTTTACCGTATCTGTGTTGGGAAGGCTTGTGGTTATAATGAGGGTAGATCGGCGCGTCCCTGTAGGCCGGATAAGGCGGAGCCGCCATCCGGCAGAAACAGACAAAAACAAAAGGCCCTGTCTTCCGACAGGGCCTTTCGTTT 161 TTerm_0838 NC_003197.2 4358674 4358686 13 4358691 4358703 13 4 92 0 21 57 42 58 41 0 4358688 AAAAAGGGGGAGT ACTCCCCTTTTTT True CGAATAGTA CTGTTATTT True True - AAAAAAGGGGAGT ACCG ACTCCCCCTTTTT TACTATTCG 74 STM4138 intergenic 4358672 4358707 + down TAAAAAGGGGGAGTCGGTACTCCCCTTTTTTCTGT AATATCGCTGCGAAGCGCCGAATAGTAAAAAGGGGGAGTCGGTACTCCCCTTTTTTCTGTTATTTCCGCAATCTTACCTGTTCCA ACAGAAAAAAGGGGAGTACCGACTCCCCCTTTT 33 TTerm_0839 NC_003197.2 4358674 4358686 13 4358691 4358703 13 4 92 0 21 57 42 58 41 0 4358688 AAAAAGGGGGAGT ACTCCCCTTTTTT True CGAATAGTA CTGTTATTT True True - AAAAAAGGGGAGT ACCG ACTCCCCCTTTTT TACTATTCG 74 STM4139 intergenic 4358672 4358707 - down ACAGAAAAAAGGGGAGTACCGACTCCCCCTTTTTA TGGAACAGGTAAGATTGCGGAAATAACAGAAAAAAGGGGAGTACCGACTCCCCCTTTTTACTATTCGGCGCTTCGCAGCGATATT ACAGAAAAAAGGGGAGTACCGACTCCCCCTTTT 33 TTerm_0840 NC_003197.2 4396283 4396291 9 4396296 4396304 9 4 88 0 13 61 38 62 37 0 4396293 AATAGCAAG CTTGCGATT True GAAAAGTGA GAGACTTCA True False - AATCGCAAG ACGC CTTGCTATT TCACTTTTC 58 STM4177 intergenic 4396232 4396316 + down TTAAAGAAGCGTACTTTGAAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAGGCGTCTTGCGATTGAGACTTCAGTG CCTGCGGTTGGATCACCTCCTTACCTTAAAGAAGCGTACTTTGAAGTGCTCACACAGATTGTCTGATGAAAAGTGAATAGCAAGGCGTCTTGCGATTGAGACTTCAGTGTCCCCTTCGTCTAGAGGCCCAGGAC CACTGAAGTCTCAATCGCAAGACGCCTTGCTAT 33 TTerm_0841 NC_003197.2 4396464 4396481 18 4396486 4396503 18 4 88 0 26 69 30 75 25 0 4396483 AATATCTCAAAACTGACT AGTCACGTTTGAGATATT True CCTGCCTTA TGCTCTTTA True False - AATATCTCAAACGTGACT CGTA AGTCAGTTTTGAGATATT TAAGGCAGG 76 STM4178 intergenic 4396388 4396624 + down CCAGCGTTCAAACTGATGAGGTCAAACCTCCAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAG AGGGGTTCGAATCCCCTAGGGGACGCCAGCGTTCAAACTGATGAGGTCAAACCTCCAGGGGACGCCACTTGCTGGTTTGTGAGTGAAAGTCACCTGCCTTAATATCTCAAAACTGACTTACGAGTCACGTTTGAGATATTTGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACAGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTG CTCACAACCCGAAGATGTTTCTTACGATTCATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCTGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACGTGACTCGTAAGTCAGTTTTGAGATAT 160 TTerm_0842 NC_003197.2 4399930 4399952 23 4399957 4399979 23 4 82 0 26 58 41 57 42 0 4399954 CAAATTAAGCAAAAGGCTCAGTC GACTGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True - CAGATAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGCTTAATTTG GATGCCTGG 84 STM4180 intergenic 4399931 4400260 + down AATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACT GAGAGTAGGGAACTGCCAGGCATCAAATTAAGCAAAAGGCTCAGTCGAAAGACTGGGCCTTTTGTTTTATCTGTGGTCTGTCGGTGAGCACTCTCCTGAGGAGGAGAAATCCGCCGGGAGCGGATTTGAACGTTGCGCAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGCATCAAACAAGTGAAGAAGCCCGTCCGTCAGGACGGGCTTTTTTGCGTGTGCGGTAACTGTAAAAATGTAGGCCTGATAAGCGCAGCGCCATCAGGCAACCTGCACCGCCGGATGGCCGCTTCGCCTTATCCGGCCTACATGCACTTATCAGACAGCGCCGCTACTCACGGATAAATTAAATTCAATAATG AGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATTT 330 TTerm_0843 NC_003197.2 4399930 4399952 23 4399957 4399979 23 4 82 0 26 58 41 57 42 0 4399954 CAAATTAAGCAAAAGGCTCAGTC GACTGGGCCTTTTGTTTTATCTG True CCAGGCATC TGGTCTGTC True True - CAGATAAAACAAAAGGCCCAGTC TTTC GACTGAGCCTTTTGCTTAATTTG GATGCCTGG 84 STM4181 intergenic 4399931 4400260 - down AGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATT CATTATTGAATTTAATTTATCCGTGAGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATTTGATGCCTGGCAGTTCCCTACTCTC AGTAGCGGCGCTGTCTGATAAGTGCATGTAGGCCGGATAAGGCGAAGCGGCCATCCGGCGGTGCAGGTTGCCTGATGGCGCTGCGCTTATCAGGCCTACATTTTTACAGTTACCGCACACGCAAAAAAGCCCGTCCTGACGGACGGGCTTCTTCACTTGTTTGATGCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTCCTCAGGAGAGTGCTCACCGACAGACCACAGATAAAACAAAAGGCCCAGTCTTTCGACTGAGCCTTTTGCTTAATTT 330 TTerm_0844 NC_003197.2 4419271 4419281 11 4419291 4419301 11 9 81 0 12 90 9 100 0 0 4419285 AAATACTATAA TTATAATACTT True ATTGGTAAA CATTTGCTA True False - AAGTATTATAA AAAACCATC TTATAGTATTT TTTACCAAT 24 STM4198 intergenic 4419153 4419395 - down AATCTCTCGCCGGGTATAAAGCCCGGCGGTGTTGAATTAAAATAATACCCTTTATTATTTGTTAGCATCAAATGTTCAGTTTGCATAGCAAATGAAGTATTATAAAAAACCATCTTATAGTATTTTTACCAATTGATACGTGAACCCCCTACGATAATAACACTTATTTAACAAGATAGCTTTCTTCATTGGAGGAAGAAAAAATCAAACTCTTACATTGCTTATTATTTTCCATATCTAAA TCAGTAGCTGGCAATACGATTGTTGAATCTCTCGCCGGGTATAAAGCCCGGCGGTGTTGAATTAAAATAATACCCTTTATTATTTGTTAGCATCAAATGTTCAGTTTGCATAGCAAATGAAGTATTATAAAAAACCATCTTATAGTATTTTTACCAATTGATACGTGAACCCCCTACGATAATAACACTTATTTAACAAGATAGCTTTCTTCATTGGAGGAAGAAAAAATCAAACTCTTACATTGCTTATTATTTTCCATATCTAAAAAAGGAAATGGATTACGGGAATACT AATCTCTCGCCGGGTATAAAGCCCGGCGGTGTTGAATTAAAATAATACCCTTTATTATTTGTTAGCATCAAATGTTCAGTTTGCATAGCAAATGAAGTATTATAAAAAACCATCTTATAGTATT 124 TTerm_0845 NC_003197.2 4436170 4436185 16 4436190 4436205 16 4 87 0 22 50 50 50 50 0 4436187 AAAAAATCCCCGGCGT ACGACGGGGATTTGTT True AAACAAATA TAATGGTTA True False - AACAAATCCCCGTCGT TTAT ACGCCGGGGATTTTTT TATTTGTTT 76 STM4216 intergenic 4436052 4436205 - down AACAAATCCCCGTCGTTTATACGCCGGGGATTTTTTATTTGTTTTAACTTTTTTCTCTAAAGGAGATTAAAAGACGCCTGATGCCTGATACATCAAAATACGTCTGAACGATAACGAAGAGAGAATATTATCTCTCCCGGTAAATCAAGGAAA AACTGATTCAACGAGGTAACCATTAAACAAATCCCCGTCGTTTATACGCCGGGGATTTTTTATTTGTTTTAACTTTTTTCTCTAAAGGAGATTAAAAGACGCCTGATGCCTGATACATCAAAATACGTCTGAACGATAACGAAGAGAGAATATTATCTCTCCCGGTAAATCAAGGAAAACCGTATATGGAAACATTATCTGTT AACAAATCCCCGTCGTTTATACGCCGGGGATTTTT 35 TTerm_0846 NC_003197.2 4441920 4441931 12 4441938 4441949 12 6 91 0 19 62 37 63 36 0 4441934 AAAAAGGCCGAT ATCGGCTTTTTT True AAGATAATA TATAAGATA True True - AAAAAAGCCGAT GTGAAT ATCGGCCTTTTT TATTATCTT 70 STM4221 intergenic 4441826 4442257 + down TGGCACTGCGCTTATCCGGTCTACGTAATGCATAGCGTCTGTAGGCCGGGTAAGGCGTTTCGCCGCCATCCGGCAAAAAGAGAATAAGATAATAAAAAGGCCGATATTCACATCGGCTTTTTTTATAAGATAATTCCGCTTGTCCGTCTTTATCCCCACAGTTTTATATTGAGCTTAATCCTAAAATAAGCAATAACCAGAAAATCACTCTGCGTTATTTTCAGATTATACGGATGCTGATGTCTTTTAGTTTAATTTTAACTTATTGATTTTATTTGTTTGTTAATTAAATAATGTAGGCGTTACTTCTTTAAAGTTTAATTATCCTAAAACTTCGATGTTATTTCTCCCGGACATAATCCGCCTGCTTTGGTTGTGTATACTCGGTAGCGCCCGAAATTCTTTTGGGTAAATCTCCATTCATTCAATGA CCGTTATAAAGCCTGGCGCGCCTGATGGCACTGCGCTTATCCGGTCTACGTAATGCATAGCGTCTGTAGGCCGGGTAAGGCGTTTCGCCGCCATCCGGCAAAAAGAGAATAAGATAATAAAAAGGCCGATATTCACATCGGCTTTTTTTATAAGATAATTCCGCTTGTCCGTCTTTATCCCCACAGTTTTATATTGAGCTTAATCCTAAAATAAGCAATAACCAGAAAATCACTCTGCGTTATTTTCAGATTATACGGATGCTGATGTCTTTTAGTTTAATTTTAACTTATTGATTTTATTTGTTTGTTAATTAAATAATGTAGGCGTTACTTCTTTAAAGTTTAATTATCCTAAAACTTCGATGTTATTTCTCCCGGACATAATCCGCCTGCTTTGGTTGTGTATACTCGGTAGCGCCCGAAATTCTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAGTTATGATGAAAAAAGTAC TCATTGAATGAATGGAGATTTACCCAAAAGAATTTCGGGCGCTACCGAGTATACACAACCAAAGCAGGCGGATTATGTCCGGGAGAAATAACATCGAAGTTTTAGGATAATTAAACTTTAAAGAAGTAACGCCTACATTATTTAATTAACAAACAAATAAAATCAATAAGTTAAAATTAAACTAAAAGACATCAGCATCCGTATAATCTGAAAATAACGCAGAGTGATTTTCTGGTTATTGCTTATTTTAGGATTAAGCTCAATATAAAACTGTGGGGATAAAGACGGACAAGCGGAATTATCTTATAAAAAAAGCCGATGTGAATATCGGCCTTTT 337 TTerm_0847 NC_003197.2 4446667 4446672 6 4446677 4446682 6 4 100 0 12 16 83 16 83 0 4446674 GCGCTC GAGCGC True TAAAAAAAG CAAAATACG True False - GCGCTC TTCG GAGCGC CTTTTTTTA 64 STM4226 intergenic 4446597 4446763 + down GCGTCGCCACACCGTAACGGACGTATGGCGTGGCAATAAATTAGCCGCTGTCTATAACGCATAAAAAAAGCGCTCCGAAGAGCGCCAAAATACGACCATAAGTGGGGATAACATAACTTGAGGGCAGTGGCATTGCCCGTTGCCGGGCAGGTACTTCGATAAAACT TTCGAACCGACTACGGCGAGAATAGGCGTCGCCACACCGTAACGGACGTATGGCGTGGCAATAAATTAGCCGCTGTCTATAACGCATAAAAAAAGCGCTCCGAAGAGCGCCAAAATACGACCATAAGTGGGGATAACATAACTTGAGGGCAGTGGCATTGCCCGTTGCCGGGCAGGTACTTCGATAAAACTTAACCTTTCACACCCCCTGCCGTCA AGTTTTATCGAAGTACCTGCCCGGCAACGGGCAATGCCACTGCCCTCAAGTTATGTTATCCCCACTTATGGTCGTATTTTGGCGCTCTTCGGAGCG 96 TTerm_0848 NC_003197.2 4446667 4446672 6 4446677 4446682 6 4 100 0 12 16 83 16 83 0 4446674 GCGCTC GAGCGC True TAAAAAAAG CAAAATACG True False - GCGCTC TTCG GAGCGC CTTTTTTTA 64 STM4227 intergenic 4446597 4446763 - down AGTTTTATCGAAGTACCTGCCCGGCAACGGGCAATGCCACTGCCCTCAAGTTATGTTATCCCCACTTATGGTCGTATTTTGGCGCTCTTCGGAGCGCTTTTTTTATGCGTTATAGACAGCGGCTAATTTATTGCCACGCCATACGTCCGTTACGGTGTGGCGACGC TGACGGCAGGGGGTGTGAAAGGTTAAGTTTTATCGAAGTACCTGCCCGGCAACGGGCAATGCCACTGCCCTCAAGTTATGTTATCCCCACTTATGGTCGTATTTTGGCGCTCTTCGGAGCGCTTTTTTTATGCGTTATAGACAGCGGCTAATTTATTGCCACGCCATACGTCCGTTACGGTGTGGCGACGCCTATTCTCGCCGTAGTCGGTTCGAA AGTTTTATCGAAGTACCTGCCCGGCAACGGGCAATGCCACTGCCCTCAAGTTATGTTATCCCCACTTATGGTCGTATTTTGGCGCTCTTCGGAGCG 96 TTerm_0849 NC_003197.2 4465520 4465527 8 4465533 4465540 8 5 100 0 16 25 75 25 75 0 4465529 GGGCTTCC GGAAGCCC True AAAAGAAAG AATTTCTTT True False - GGGCTTCC ACCCG GGAAGCCC CTTTCTTTT 64 STM4244 intergenic 4465384 4465559 + down GGTATTGAGCGGTTCGTCACAACCTGGAACTTTGCCCTCACAAGCAAATAGGAATCGATTATTAAATCTGTCATGATTGCGCAGGTAACGAATTCATCGCGCTGTACCCTACATACAGCCGAACAAAAAAAGAAAGGGCTTCCCGGGTGGAAGCCCAATTTCTTTGCAGAGCTAT GCGCAATAACCGTCGGTTTTACTAAGGTATTGAGCGGTTCGTCACAACCTGGAACTTTGCCCTCACAAGCAAATAGGAATCGATTATTAAATCTGTCATGATTGCGCAGGTAACGAATTCATCGCGCTGTACCCTACATACAGCCGAACAAAAAAAGAAAGGGCTTCCCGGGTGGAAGCCCAATTTCTTTGCAGAGCTATTACGGAATCAGCAGGCTTGAGCCCT ATAGCTCTGCAAAGAAATTGGGCTTCCACCCGGGAAGCC 39 TTerm_0850 NC_003197.2 4465520 4465527 8 4465533 4465540 8 5 100 0 16 25 75 25 75 0 4465529 GGGCTTCC GGAAGCCC True AAAAGAAAG AATTTCTTT True False - GGGCTTCC ACCCG GGAAGCCC CTTTCTTTT 64 STM4245 intergenic 4465384 4465559 - down ATAGCTCTGCAAAGAAATTGGGCTTCCACCCGGGAAGCCCTTTCTTTTTTTGTTCGGCTGTATGTAGGGTACAGCGCGATGAATTCGTTACCTGCGCAATCATGACAGATTTAATAATCGATTCCTATTTGCTTGTGAGGGCAAAGTTCCAGGTTGTGACGAACCGCTCAATACC AGGGCTCAAGCCTGCTGATTCCGTAATAGCTCTGCAAAGAAATTGGGCTTCCACCCGGGAAGCCCTTTCTTTTTTTGTTCGGCTGTATGTAGGGTACAGCGCGATGAATTCGTTACCTGCGCAATCATGACAGATTTAATAATCGATTCCTATTTGCTTGTGAGGGCAAAGTTCCAGGTTGTGACGAACCGCTCAATACCTTAGTAAAACCGACGGTTATTGCGC ATAGCTCTGCAAAGAAATTGGGCTTCCACCCGGGAAGCC 39 TTerm_0851 NC_003197.2 4471418 4471425 8 4471431 4471438 8 5 100 0 16 37 62 37 62 0 4471427 AGGAGAGC GCTCTCCT True TAAAAATCA TTTTTGCAT True True - AGGAGAGC CTGTC GCTCTCCT TGATTTTTA 64 STM4249 intergenic 4471412 4471529 + down AAATCAGGAGAGCGACAGGCTCTCCTTTTTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTGTTTTTAGGA AGTCATTGTCAACTCGGAGTACTAAAAATCAGGAGAGCGACAGGCTCTCCTTTTTTGCATGATTTTTGCACAAACTTGCCCCGCTGGCTTTTACCTTTTCCAGACTTGCTGCACACTATTCAGGAGACGTTTGTTTTTAGGAAGGAGCAGCCTATGTGGTATCAGCG TCCTAAAAACAAACGTCTCCTGAATAGTGTGCAGCAAGTCTGGAAAAGGTAAAAGCCAGCGGGGCAAGTTTGTGCAAAAATCATGCAAAAAAGGAGAGCCTGTCGCTCTCC 111 TTerm_0852 NC_003197.2 4473194 4473204 11 4473211 4473221 11 6 90 0 17 22 77 20 80 0 4473207 GCCGCTTCCCG CGGAAAGCGGC True AAAATGATG GTGAAGGTT True False - GCCGCTTTCCG ATTCGC CGGGAAGCGGC CATCATTTT 58 STM4254 intergenic 4473100 4473229 - down ACCTTCACGCCGCTTTCCGATTCGCCGGGAAGCGGCATCATTTTTCCTCATCCCACCTCATTGTATCCGTGTTGAGCATTTGTGATTTGCGTGCCGCCTCGCTCTGACATGTGATAGCGCAAACGGTCT GCTTCCTTAAACCTATGCTCAAATAACCTTCACGCCGCTTTCCGATTCGCCGGGAAGCGGCATCATTTTTCCTCATCCCACCTCATTGTATCCGTGTTGAGCATTTGTGATTTGCGTGCCGCCTCGCTCTGACATGTGATAGCGCAAACGGTCTGTTATGGAAAACACCATGAAGTTGC ACCTTCACGCCGCTTTCCGATTCGCCGGGAAGCGG 35 TTerm_0853 NC_003197.2 4501319 4501332 14 4501338 4501351 14 5 100 0 28 64 35 64 35 0 4501334 AAAAAAGACCCGTT AACGGGTCTTTTTT True TGCTTAATA GTCATTTAA True True - AAAAAAGACCCGTT TGTGC AACGGGTCTTTTTT TATTAAGCA 88 STM4262 intergenic 4501275 4501553 + down AATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTTGTCATTTAACGAGTCGGCAACGTCTTCAATAAGTTTAGCTCGATTCTGTTAGGGCTATTCCACTTGCCATTTTTGGATAACCACACCTGGCGGCCCTCATCAACGGCAATGCGAGGGACGTGATGGTGCGCAAGGCTACCCCTGGCGCGCGATTCCGCGTTGAGATAACCGGTGGGCGGCTTCAGCGGCAGCGATAGCGTAT TTCTCCGGATAAATTATTAATGTAAAATAAGCAGCGCTTGTCGCTGTTATCAGGTGGTACTGCTTAATAAAAAAGACCCGTTGCACAAACGGGTCTTTTTTGTCATTTAACGAGTCGGCAACGTCTTCAATAAGTTTAGCTCGATTCTGTTAGGGCTATTCCACTTGCCATTTTTGGATAACCACACCTGGCGGCCCTCATCAACGGCAATGCGAGGGACGTGATGGTGCGCAAGGCTACCCCTGGCGCGCGATTCCGCGTTGAGATAACCGGTGGGCGGCTTCAGCGGCAGCGATAGCGTATCAGGTCAGCACCATCGGCCATTCTG ATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTT 234 TTerm_0854 NC_003197.2 4501319 4501332 14 4501338 4501351 14 5 100 0 28 64 35 64 35 0 4501334 AAAAAAGACCCGTT AACGGGTCTTTTTT True TGCTTAATA GTCATTTAA True True - AAAAAAGACCCGTT TGTGC AACGGGTCTTTTTT TATTAAGCA 88 STM4263 intergenic 4501275 4501553 - down ATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTTTATTAAGCAGTACCACCTGATAACAGCGACAAGCGCTGCTTATT CAGAATGGCCGATGGTGCTGACCTGATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTTTATTAAGCAGTACCACCTGATAACAGCGACAAGCGCTGCTTATTTTACATTAATAATTTATCCGGAGAA ATACGCTATCGCTGCCGCTGAAGCCGCCCACCGGTTATCTCAACGCGGAATCGCGCGCCAGGGGTAGCCTTGCGCACCATCACGTCCCTCGCATTGCCGTTGATGAGGGCCGCCAGGTGTGGTTATCCAAAAATGGCAAGTGGAATAGCCCTAACAGAATCGAGCTAAACTTATTGAAGACGTTGCCGACTCGTTAAATGACAAAAAAGACCCGTTTGTGCAACGGGTCTTTTT 234 TTerm_0855 NC_003197.2 4504887 4504899 13 4504906 4504918 13 6 100 0 26 53 46 53 46 0 4504902 AAACTAAAGCGCC GGCGCTTTAGTTT True CTCACCTAA GTTTCCGGT True False - AAACTAAAGCGCC CTTAGC GGCGCTTTAGTTT TTAGGTGAG 92 STM4266 intergenic 4504854 4505139 + down CATGCACTCGGCCATCGGGCTGAGCTCACCTAAAACTAAAGCGCCGCTAAGGGCGCTTTAGTTTGTTTCCGGTCTTTGTCTTTCGCTCTATCCCGCTGATTACAGGAGGGTTTCCCCCGACGTCAACACCCCTCATATCGAGCACGTGGTGGAGGTTCCGGTTTGTGTTGATACTGTAAGTGTAAGCGACGACGCCCTGTTCGCCAGCGAAATGCTGATTTTTTAGCCGAAATTTTTACGGCAACTGCCATAATTTTCTATAGTTAGTTGGCATACCTTACAGGA CGCCCGGCTGCTTGAAGATGATTAACATGCACTCGGCCATCGGGCTGAGCTCACCTAAAACTAAAGCGCCGCTAAGGGCGCTTTAGTTTGTTTCCGGTCTTTGTCTTTCGCTCTATCCCGCTGATTACAGGAGGGTTTCCCCCGACGTCAACACCCCTCATATCGAGCACGTGGTGGAGGTTCCGGTTTGTGTTGATACTGTAAGTGTAAGCGACGACGCCCTGTTCGCCAGCGAAATGCTGATTTTTTAGCCGAAATTTTTACGGCAACTGCCATAATTTTCTATAGTTAGTTGGCATACCTTACAGGAGACAGCCATGCTGACGGTGCACCAT TCCTGTAAGGTATGCCAACTAACTATAGAAAATTATGGCAGTTGCCGTAAAAATTTCGGCTAAAAAATCAGCATTTCGCTGGCGAACAGGGCGTCGTCGCTTACACTTACAGTATCAACACAAACCGGAACCTCCACCACGTGCTCGATATGAGGGGTGTTGACGTCGGGGGAAACCCTCCTGTAATCAGCGGGATAGAGCGAAAGACAAAGACCGGAAACAAACTAAAGCGCCCTTAGCGGCGCTTTAGTT 252 TTerm_0856 NC_003197.2 4507529 4507540 12 4507545 4507556 12 4 100 0 24 33 66 33 66 0 4507542 AAAACGGGCGGC GCCGCCCGTTTT True CATTCTGAA CATTTTCAG True True - AAAACGGGCGGC CAAC GCCGCCCGTTTT TTCAGAATG 96 STM4268 intergenic 4507511 4507651 + down CTCTGCCTTCATTCTGAAAAACGGGCGGCGTTGGCCGCCCGTTTTCATTTTCAGGACACATCACGTTACCTTTTGCGTTAATCTGAAGAAGGTGAAACCGAGGCATGATGCCTCTCTCCATCATAAAAAACATCGCAAAC TTATGCCGGCGGCTGGGCTATCTAGCTCTGCCTTCATTCTGAAAAACGGGCGGCGTTGGCCGCCCGTTTTCATTTTCAGGACACATCACGTTACCTTTTGCGTTAATCTGAAGAAGGTGAAACCGAGGCATGATGCCTCTCTCCATCATAAAAAACATCGCAAACAGGGAACGCATGGAAATTTTCTTCA GTTTGCGATGTTTTTTATGATGGAGAGAGGCATCATGCCTCGGTTTCACCTTCTTCAGATTAACGCAAAAGGTAACGTGATGTGTCCTGAAAATGAAAACGGGCGGCCAACGCCGCCCGTTT 122 TTerm_0857 NC_003197.2 4538614 4538620 7 4538627 4538633 7 6 100 0 14 0 100 0 100 0 4538623 GCGCGGG CCCGCGC True TAAAAAAAG AAAAAGGTA True False - GCGCGGG CCCCAT CCCGCGC CTTTTTTTA 76 STM4296 intergenic 4538428 4538713 - down ATCACAAAGAGTCTTTTTTTTGAGGATGGCATGTATTCCCTGAGTATTGCTGCAAAACAATAATACTGTCATACCTTTTTGCGCGGGCCCCATCCCGCGCTTTTTTTATACAAAAATGACAAGTTTCCACTCGCGTACAACTTTTTGTACACCCTAATTCATCGTACAAATATTGTAATATTATTCAGGAAAGTTATTTTAGTGCAGTTTCAATTCATCACACAATTGACTCAGTCCCCGTTATCTCTCCCGTTTGGCGAGATCCGGTCTTTTATGTTCATATTC ATCACGTTATGTGCGTGAAAGCCTAATCACAAAGAGTCTTTTTTTTGAGGATGGCATGTATTCCCTGAGTATTGCTGCAAAACAATAATACTGTCATACCTTTTTGCGCGGGCCCCATCCCGCGCTTTTTTTATACAAAAATGACAAGTTTCCACTCGCGTACAACTTTTTGTACACCCTAATTCATCGTACAAATATTGTAATATTATTCAGGAAAGTTATTTTAGTGCAGTTTCAATTCATCACACAATTGACTCAGTCCCCGTTATCTCTCCCGTTTGGCGAGATCCGGTCTTTTATGTTCATATTCCAGGAGTTCGGGTATGAGGATTTGC ATCACAAAGAGTCTTTTTTTTGAGGATGGCATGTATTCCCTGAGTATTGCTGCAAAACAATAATACTGTCATACCTTTTTGCGCGGGCCCCATCCCGCG 99 TTerm_0858 NC_003197.2 4561812 4561822 11 4561827 4561837 11 4 81 0 12 81 18 88 11 0 4561824 TTATTCTGAAA TTTCAAAAGAA True AATCAAAAT AACTAATAT True False - TTCTTTTGAAA TATT TTTCAGAATAA ATTTTGATT 32 STM4316 intergenic 4561780 4562038 - down ATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGA AAAGATTAAAGGCAATTATTACTTAATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGAAATTATCATGCTAAAAGTATTTAAT ATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATA 226 TTerm_0859 NC_003197.2 4561909 4561917 9 4561923 4561931 9 5 88 0 13 77 22 75 25 0 4561919 AAATGCTAT ATTGCATTT True TCTATGGAA CTACATATT True False - AAATGCAAT ATAAA ATAGCATTT TTCCATAGA 42 STM4316 intergenic 4561780 4562038 - down ATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGA AAAGATTAAAGGCAATTATTACTTAATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATTTTCCATAGAAAATGAAAAGATCGCCACCTGATACCTTAAGTTCGCAAATAATTATATAGCTATATATTAGTTTTCTTTTGAAATATTTTTCAGAATAATTTTGATTTACACGCACATTTAATAAAAGGAAATTATCATGCTAAAAGTATTTAAT ATTCAAATTTTAAAGAGATAAATTGATAATAACATGAGCCAATTCTTGTAAATTTCCATCTTTTTTTTATACGCGACATAGTTTTTTAACGATACTATAATATGTAGAAATGCAATATAAAATAGCATT 129 TTerm_0860 NC_003197.2 4582457 4582467 11 4582473 4582483 11 5 100 0 22 45 54 45 54 0 4582469 GCCCTCTTATC GATAAGAGGGC True GAAAAAATG GTCGTGGCA True False - GCCCTCTTATC TACCC GATAAGAGGGC CATTTTTTC 60 STM4340 intergenic 4582396 4582495 - down AGTTGCCACGACGCCCTCTTATCTACCCGATAAGAGGGCATTTTTTCTTTTCCTGCCTCTCATTTTCCCGCCAGGTTCTACACTTAGAAAAAACACTGG CGGCGATTGGCGTTATCACTCTCTAAGTTGCCACGACGCCCTCTTATCTACCCGATAAGAGGGCATTTTTTCTTTTCCTGCCTCTCATTTTCCCGCCAGGTTCTACACTTAGAAAAAACACTGGAAGGAAAAACGCTATGCGCTTGCTG AGTTGCCACGACGCCCTCTTATCTACCCGATAAGAGGG 38 TTerm_0861 NC_003197.2 4587115 4587124 10 4587130 4587139 10 5 100 0 20 50 50 50 50 0 4587126 AAAATGGCGC GCGCCATTTT True CGCGAGATA GTAGCATAT True True - AAAATGGCGC TTATT GCGCCATTTT TATCTCGCG 80 STM4344 intergenic 4587088 4587301 + down ATCTGAAATTCACTCTTTCGCGAGATAAAATGGCGCAATAAGCGCCATTTTGTAGCATATTTTTTCAATTATCCTCTGTTTGCCACAACATAAGGCTGGAACTTTGATGCCATTTAGGTATCAATCCTGTGTTGATTTTTTTATCGCTGACCTTCGTAAAAAAGAAGGCGGCGTCAATCGGTGAGCGGCGTCTGGCAAACGCGCTCGAGCGTA TGCTTTTACGGTCGATCGGGCGTAAATCTGAAATTCACTCTTTCGCGAGATAAAATGGCGCAATAAGCGCCATTTTGTAGCATATTTTTTCAATTATCCTCTGTTTGCCACAACATAAGGCTGGAACTTTGATGCCATTTAGGTATCAATCCTGTGTTGATTTTTTTATCGCTGACCTTCGTAAAAAAGAAGGCGGCGTCAATCGGTGAGCGGCGTCTGGCAAACGCGCTCGAGCGTAAGGGATGGTTGAATGACCCACACGA TACGCTCGAGCGCGTTTGCCAGACGCCGCTCACCGATTGACGCCGCCTTCTTTTTTACGAAGGTCAGCGATAAAAAAATCAACACAGGATTGATACCTAAATGGCATCAAAGTTCCAGCCTTATGTTGTGGCAAACAGAGGATAATTGAAAAAATATGCTACAAAATGGCGCTTATTGCGCCATTT 186 TTerm_0862 NC_003197.2 4596999 4597006 8 4597014 4597021 8 7 87 0 11 31 68 28 71 0 4597009 CCACAACG CGTTGGGG True AAAATTATC CACGTTTTG True True - CCCCAACG CGATATT CGTTGTGG GATAATTTT 54 STM4354 intergenic 4596964 4597245 + down TTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATT TCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATTCAGGCATCGCGCACCAGCCCTTTTT AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTG 246 TTerm_0863 NC_003197.2 4596999 4597006 8 4597014 4597021 8 7 87 0 11 31 68 28 71 0 4597009 CCACAACG CGTTGGGG True AAAATTATC CACGTTTTG True True - CCCCAACG CGATATT CGTTGTGG GATAATTTT 54 STM4355 intergenic 4596964 4597245 - down AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAA AAAAAGGGCTGGTGCGCGATGCCTGAATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGA AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTG 246 TTerm_0864 NC_003197.2 4597099 4597107 9 4597115 4597123 9 7 88 0 13 83 16 87 12 0 4597110 AAATTATAC GTAGAATTT True AATGCAAAA CTATAATTT True False - AAATTCTAC GCGTCAG GTATAATTT TTTTGCATT 42 STM4354 intergenic 4596964 4597245 + down TTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATT TCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAATTCTTATCTACAGTAAAATTATCCACAACGAATATCGCGTTGGGGCACGTTTTGTTCCGCTTTCGTCAGATCCTTGTAAACAGACTTATCCACAGGGCGGCCCATTACTCCTGGAATGCAAAAAATTATACCTGACGCGTAGAATTTCTATAATTTACTGAAAAATATAGAAAAAATAAGATTTCAAAACGTTAGCTTTATTGACTATTCCTTTTTTCCCTCTTGAATCGCAATGTGTTTTTATTTTTATACACAGCCTGTGAATAATTCAGGCATCGCGCACCAGCCCTTTTT AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATT 146 TTerm_0865 NC_003197.2 4597099 4597107 9 4597115 4597123 9 7 88 0 13 83 16 87 12 0 4597110 AAATTATAC GTAGAATTT True AATGCAAAA CTATAATTT True False - AAATTCTAC GCGTCAG GTATAATTT TTTTGCATT 42 STM4355 intergenic 4596964 4597245 - down AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAA AAAAAGGGCTGGTGCGCGATGCCTGAATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATTTTTTGCATTCCAGGAGTAATGGGCCGCCCTGTGGATAAGTCTGTTTACAAGGATCTGACGAAAGCGGAACAAAACGTGCCCCAACGCGATATTCGTTGTGGATAATTTTACTGTAGATAAGAATTGGAGCGGGAAACGAGACTCGAACTCGCGACCCCGA AATTATTCACAGGCTGTGTATAAAAATAAAAACACATTGCGATTCAAGAGGGAAAAAAGGAATAGTCAATAAAGCTAACGTTTTGAAATCTTATTTTTTCTATATTTTTCAGTAAATTATAGAAATTCTACGCGTCAGGTATAATT 146 TTerm_0866 NC_003197.2 4614356 4614371 16 4614378 4614393 16 6 93 0 27 71 28 73 26 0 4614374 TAAGAAAAAACCATCC GGATGGTTTTTTTTTA True GTATTTTTT TCTTTGACT True True - TAAAAAAAAACCATCC GATTAT GGATGGTTTTTTCTTA AAAAAATAC 86 STM4369 intergenic 4614339 4614460 + down TGCTGATAGTATTTTTTAAGAAAAAACCATCCATAATCGGATGGTTTTTTTTTATCTTTGACTGGTAATATAAAAAACAAAACCTACCCTGTAATTTCTTTTATTTATAAAAATGAGATAG TGAAGCCGTTCGCCAGCGCACCTGATGCTGATAGTATTTTTTAAGAAAAAACCATCCATAATCGGATGGTTTTTTTTTATCTTTGACTGGTAATATAAAAAACAAAACCTACCCTGTAATTTCTTTTATTTATAAAAATGAGATAGAGATAAAAATATGGCATGGACTCCA CTATCTCATTTTTATAAATAAAAGAAATTACAGGGTAGGTTTTGTTTTTTATATTACCAGTCAAAGATAAAAAAAAACCATCCGATTATGGATGGTTTTTTCTT 104 TTerm_0867 NC_003197.2 4623792 4623799 8 4623804 4623811 8 4 100 0 16 25 75 25 75 0 4623801 ATGCCGGG CCCGGCAT True TGGAAAAAA GATATCGAC True False - ATGCCGGG ATTA CCCGGCAT TTTTTTCCA 80 STM4382 intergenic 4623728 4623821 - down AGTCGATATCATGCCGGGATTACCCGGCATTTTTTCCATTTACTTTAGTATTTCCAGGCTATTTCAAATATCATCTTTTCAAATCAATTTGTA ATCTACCGTTCAAATCCTTCCTGTGAGTCGATATCATGCCGGGATTACCCGGCATTTTTTCCATTTACTTTAGTATTTCCAGGCTATTTCAAATATCATCTTTTCAAATCAATTTGTATCGGAATAGCTCATGACTGAAGCAC AGTCGATATCATGCCGGGATTACCCGGCA 29 TTerm_0868 NC_003197.2 4645107 4645112 6 4645121 4645126 6 8 100 0 12 16 83 16 83 0 4645116 CGGCTC GAGCCG True ATGAAAACC ATAAGTTCA True False - CGGCTC ACTGCTAC GAGCCG GGTTTTCAT 64 STM4408 intergenic 4645045 4645217 - down ACGACGCTGGCGTAGGGGGAACTTGTCGGAGTTGAAAATGAACCCTCTGGCGACTTTACAGTAGCTTACGCTATACTAGCCCTGAACTTATCGGCTCACTGCTACGAGCCGGTTTTCATTAAACGTTACCACACGGATTTATAAACTTCCCTTCCGAGGATCTGGCGTTTCG GCGTTTGCCTGCCGCCTGACGCGTGACGACGCTGGCGTAGGGGGAACTTGTCGGAGTTGAAAATGAACCCTCTGGCGACTTTACAGTAGCTTACGCTATACTAGCCCTGAACTTATCGGCTCACTGCTACGAGCCGGTTTTCATTAAACGTTACCACACGGATTTATAAACTTCCCTTCCGAGGATCTGGCGTTTCGCCGGATAAGATATGTTAAACAGTAT ACGACGCTGGCGTAGGGGGAACTTGTCGGAGTTGAAAATGAACCCTCTGGCGACTTTACAGTAGCTTACGCTATACTAGCCCTGAACTTATCGGCTCACTGCTACGAGCC 110 TTerm_0869 NC_003197.2 4654696 4654713 18 4654718 4654735 18 4 83 0 21 61 38 60 40 0 4654715 CAATAAAAAGGCCCTCAT ATGAGAGCCTTTATCTTG True TCATTAGCC ACGCTTATG True False - CAAGATAAAGGCTCTCAT AGTA ATGAGGGCCTTTTTATTG GGCTAATGA 58 STM4414 intergenic 4654346 4654756 - down AGTTCGCTTTTACATAAGCGTCAAGATAAAGGCTCTCATAGTAATGAGGGCCTTTTTATTGGCTAATGAATAGAACACAGTTTTTATCATTATTAATTTAACATTCACGGAATGAATAATACTTTACCTGATTTTTTATTAAAAAGGGTTGAATACGCTCACGGTTTCTCTAAAAAGCTTAAGATAATAATTGTTTTGTGAATGCTCCCAGACTCCCATGGACTTACGCCCTAAATATTAGCAAGCGCTAAAGTCTTATTTAGTGCATAAGCCCGATTACCTTTTTAATAAGGTATCCTAAGCTCTCCCTACCAATAACCGTATTTTTAATCCAACATAACATCCGCTCAAAACACACTTTTTAATATATTTTTAAGGGCTGCCATAATTATTTACTATTTTAAGAGATT CCTTCGAGCGCGCAGCGAAGAAATAAGTTCGCTTTTACATAAGCGTCAAGATAAAGGCTCTCATAGTAATGAGGGCCTTTTTATTGGCTAATGAATAGAACACAGTTTTTATCATTATTAATTTAACATTCACGGAATGAATAATACTTTACCTGATTTTTTATTAAAAAGGGTTGAATACGCTCACGGTTTCTCTAAAAAGCTTAAGATAATAATTGTTTTGTGAATGCTCCCAGACTCCCATGGACTTACGCCCTAAATATTAGCAAGCGCTAAAGTCTTATTTAGTGCATAAGCCCGATTACCTTTTTAATAAGGTATCCTAAGCTCTCCCTACCAATAACCGTATTTTTAATCCAACATAACATCCGCTCAAAACACACTTTTTAATATATTTTTAAGGGCTGCCATAATTATTTACTATTTTAAGAGATTATGATGAAAAATGATATATTAATTA AGTTCGCTTTTACATAAGCGTCAAGATAAAGGCTCTCATAGTAATGAGGGCCTTTTTATT 60 TTerm_0870 NC_003197.2 4659398 4659408 11 4659416 4659426 11 7 100 0 22 36 63 36 63 0 4659411 GCCGATGATCG CGATCATCGGC True AAAAACAAG ATTGTGGTG True False - GCCGATGATCG CTAAATA CGATCATCGGC CTTGTTTTT 68 STM4417 intergenic 4659389 4659440 + down AAAAACAAGCCGATGATCGTATTTAGCGATCATCGGCATTGTGGTGAAACT TTCACTGGCGCTGGCGACGGAGTAAAAAAACAAGCCGATGATCGTATTTAGCGATCATCGGCATTGTGGTGAAACTTAATCAGAATAACGTTCGGTTTGAA AGTTTCACCACAATGCCGATGATCGCTAAATACGATCATCGG 42 TTerm_0871 NC_003197.2 4659398 4659408 11 4659416 4659426 11 7 100 0 22 36 63 36 63 0 4659411 GCCGATGATCG CGATCATCGGC True AAAAACAAG ATTGTGGTG True False - GCCGATGATCG CTAAATA CGATCATCGGC CTTGTTTTT 68 STM4418 intergenic 4659389 4659440 - down AGTTTCACCACAATGCCGATGATCGCTAAATACGATCATCGGCTTGTTTTT TTCAAACCGAACGTTATTCTGATTAAGTTTCACCACAATGCCGATGATCGCTAAATACGATCATCGGCTTGTTTTTTTACTCCGTCGCCAGCGCCAGTGAA AGTTTCACCACAATGCCGATGATCGCTAAATACGATCATCGG 42 TTerm_0872 NC_003197.2 4663077 4663084 8 4663092 4663099 8 7 100 0 16 12 87 12 87 0 4663087 GCCAGCCG CGGCTGGC True ATAAAAAAG AAAGTACCA True False - GCCAGCCG TCCTCTG CGGCTGGC CTTTTTTAT 72 STM4419 intergenic 4662768 4663121 + down TACCTCTCCAATATTAGCGGAGAATATCCAGAGATATTCTCCGCTGGTTACACAACCTTTACTCCCTCCAGCGAGTGCGCACAGGATATACCCTGTTGAAACCTCCCCAGTGTTTACCACCTCTACGTAACTAATTGATCCATAATAATATCGGCAAATAGGGTAAGTCTTCTTCTGCATCATTATTTTATTGCGTATTCCTGGTGGGGGCCGTGCCGTAAATACGCTATATACAAAACAGGGAAATAATTTAAGAGAAGGCGGATAGCGATCTTATGAGCGTGTGTGGCGCAGAGTTGAATAAAAAAGCCAGCCGCAGAGGACGGCTGGCAAAGTACCACTCAACGAAGTGT GAAACGTCGCGATGTAATAGCCTGATACCTCTCCAATATTAGCGGAGAATATCCAGAGATATTCTCCGCTGGTTACACAACCTTTACTCCCTCCAGCGAGTGCGCACAGGATATACCCTGTTGAAACCTCCCCAGTGTTTACCACCTCTACGTAACTAATTGATCCATAATAATATCGGCAAATAGGGTAAGTCTTCTTCTGCATCATTATTTTATTGCGTATTCCTGGTGGGGGCCGTGCCGTAAATACGCTATATACAAAACAGGGAAATAATTTAAGAGAAGGCGGATAGCGATCTTATGAGCGTGTGTGGCGCAGAGTTGAATAAAAAAGCCAGCCGCAGAGGACGGCTGGCAAAGTACCACTCAACGAAGTGTTATCGCGGGTAGTCTGGTGAGTTAA ACACTTCGTTGAGTGGTACTTTGCCAGCCGTCCTCTGCGGCTGG 44 TTerm_0873 NC_003197.2 4663077 4663084 8 4663092 4663099 8 7 100 0 16 12 87 12 87 0 4663087 GCCAGCCG CGGCTGGC True ATAAAAAAG AAAGTACCA True False - GCCAGCCG TCCTCTG CGGCTGGC CTTTTTTAT 72 STM4420 intergenic 4662768 4663121 - down ACACTTCGTTGAGTGGTACTTTGCCAGCCGTCCTCTGCGGCTGGCTTTTTTATTCAACTCTGCGCCACACACGCTCATAAGATCGCTATCCGCCTTCTCTTAAATTATTTCCCTGTTTTGTATATAGCGTATTTACGGCACGGCCCCCACCAGGAATACGCAATAAAATAATGATGCAGAAGAAGACTTACCCTATTTGCCGATATTATTATGGATCAATTAGTTACGTAGAGGTGGTAAACACTGGGGAGGTTTCAACAGGGTATATCCTGTGCGCACTCGCTGGAGGGAGTAAAGGTTGTGTAACCAGCGGAGAATATCTCTGGATATTCTCCGCTAATATTGGAGAGGTA TTAACTCACCAGACTACCCGCGATAACACTTCGTTGAGTGGTACTTTGCCAGCCGTCCTCTGCGGCTGGCTTTTTTATTCAACTCTGCGCCACACACGCTCATAAGATCGCTATCCGCCTTCTCTTAAATTATTTCCCTGTTTTGTATATAGCGTATTTACGGCACGGCCCCCACCAGGAATACGCAATAAAATAATGATGCAGAAGAAGACTTACCCTATTTGCCGATATTATTATGGATCAATTAGTTACGTAGAGGTGGTAAACACTGGGGAGGTTTCAACAGGGTATATCCTGTGCGCACTCGCTGGAGGGAGTAAAGGTTGTGTAACCAGCGGAGAATATCTCTGGATATTCTCCGCTAATATTGGAGAGGTATCAGGCTATTACATCGCGACGTTTC ACACTTCGTTGAGTGGTACTTTGCCAGCCGTCCTCTGCGGCTGG 44 TTerm_0874 NC_003197.2 4727159 4727165 7 4727170 4727176 7 4 100 0 14 14 85 14 85 0 4727167 GCAGCGC GCGCTGC True CCAAAATAG GTCGTATTT True False - GCAGCGC GTAA GCGCTGC CTATTTTGG 68 STM4483 intergenic 4727137 4727192 - down ACCAGGGAAATACGACGCAGCGCGTAAGCGCTGCTATTTTGGCGCTAATAAGAGA ATGGCGGTATGCTGGTTGCCGTCTGACCAGGGAAATACGACGCAGCGCGTAAGCGCTGCTATTTTGGCGCTAATAAGAGAGACGAATATGCCATTAATAATTATT ACCAGGGAAATACGACGCAGCGCGTAAGCGCTG 33 TTerm_0875 NC_003197.2 4758216 4758225 10 4758230 4758239 10 4 100 0 20 60 40 60 40 0 4758227 AGATCCCATT AATGGGATCT True AATAAAATA CACGTTTCA True False - AGATCCCATT AATG AATGGGATCT TATTTTATT 64 STM4503 intergenic 4758196 4758465 + down CAGGAAGTAATAATAAAATAGATCCCATTCATTAATGGGATCTCACGTTTCATCCGATACGAAGACCATGGTCTCTTTGTCAGTAGCGTCATAATTACGCAAGCCTCTTTACTTTGCTTATCATTTATATTTAATGTAAATATTCACGCAACACCATTAAAAAATAAGAAAAAATGGCTCACTGTTGAACTGATATTAATACCTGAACCACTGAATTAGAGTAATGTGGCGCTATTCATAGCGTAATTTTTTCTGTTGCGGTTACAGGG TTTTGTAGTTGAAAAAGTAGGTTGACAGGAAGTAATAATAAAATAGATCCCATTCATTAATGGGATCTCACGTTTCATCCGATACGAAGACCATGGTCTCTTTGTCAGTAGCGTCATAATTACGCAAGCCTCTTTACTTTGCTTATCATTTATATTTAATGTAAATATTCACGCAACACCATTAAAAAATAAGAAAAAATGGCTCACTGTTGAACTGATATTAATACCTGAACCACTGAATTAGAGTAATGTGGCGCTATTCATAGCGTAATTTTTTCTGTTGCGGTTACAGGGGGAGGAATGCACACCTTTAGACCAT CCCTGTAACCGCAACAGAAAAAATTACGCTATGAATAGCGCCACATTACTCTAATTCAGTGGTTCAGGTATTAATATCAGTTCAACAGTGAGCCATTTTTTCTTATTTTTTAATGGTGTTGCGTGAATATTTACATTAAATATAAATGATAAGCAAAGTAAAGAGGCTTGCGTAATTATGACGCTACTGACAAAGAGACCATGGTCTTCGTATCGGATGAAACGTGAGATCCCATTAATGAATGGGATC 249 TTerm_0876 NC_003197.2 4764220 4764229 10 4764237 4764246 10 7 90 0 15 50 50 55 44 0 4764232 ATAACGCGTG CACCCGTTAT True AAAAGGCGA GATTTTTAC True True - ATAACGGGTG TAAGGGC CACGCGTTAT TCGCCTTTT 70 STM4509 intergenic 4764105 4764340 + down GGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAGCGCTCATGTAACCAATCGATTGCCTGAAAAGGCGATAACGCGTGGCCCTTACACCCGTTATGATTTTTACGCATAGCCGCTAATAAAACGGCATTTTTTATATACACATCAAGTTGATAGTGTGTTTCTGACCTTGACGTAAATAAGCGGGAAAA TCACCGACAGGCGCTGTGGCGATGAGGACAAAACAAGCTTGCGGACTCGCAGTGGGCGATGCTGTATAGCGAAATGGCATTTAGCGGCTTGCGAAGGCTGATGAGCGCTCATGTAACCAATCGATTGCCTGAAAAGGCGATAACGCGTGGCCCTTACACCCGTTATGATTTTTACGCATAGCCGCTAATAAAACGGCATTTTTTATATACACATCAAGTTGATAGTGTGTTTCTGACCTTGACGTAAATAAGCGGGAAAAGCGATGAAACACACCATTGGGATAC TTTTCCCGCTTATTTACGTCAAGGTCAGAAACACACTATCAACTTGATGTGTATATAAAAAATGCCGTTTTATTAGCGGCTATGCGTAAAAATCATAACGGGTGTAAGGGCCACGCGTTA 120 TTerm_0877 NC_003197.2 4777590 4777598 9 4777604 4777612 9 5 100 0 18 33 66 33 66 0 4777600 AAGCGCACC GGTGCGCTT True ATAATAAAA GAAAATAAA True False - AAGCGCACC TTCCC GGTGCGCTT TTTTATTAT 76 STM4524 intergenic 4777412 4777624 - down ACCTTTATTTTCAAGCGCACCTTCCCGGTGCGCTTTTTATTATTTCCCCGCAATCATAACCATCAAAAATATATCCAGTTTATTCCTGAACATTCCCATTACAGTCTATTTTCAGCTGGACTTTTCTTTTATTTACTGATGTTATGTACAGGTATTTAGCGCGATATGGCCGTGCGGGAACACGGCCATATCGCTCATCACAATCACTATTT AAAAAACCTCGCGTAAAAAAGCCTGACCTTTATTTTCAAGCGCACCTTCCCGGTGCGCTTTTTATTATTTCCCCGCAATCATAACCATCAAAAATATATCCAGTTTATTCCTGAACATTCCCATTACAGTCTATTTTCAGCTGGACTTTTCTTTTATTTACTGATGTTATGTACAGGTATTTAGCGCGATATGGCCGTGCGGGAACACGGCCATATCGCTCATCACAATCACTATTTTAGGGAATAGCCATCATGACTACCG ACCTTTATTTTCAAGCGCACCTTCCCGGTGCGCT 34 TTerm_0878 NC_003197.2 4813846 4813853 8 4813862 4813869 8 8 87 0 11 56 43 57 42 0 4813857 CGCATTTT AACATGCG True AAAATAGCC TGGTCAAAC True False - CGCATGTT GAATACGA AAAATGCG GGCTATTTT 38 STM4559 intergenic 4813814 4813892 + down TTGCCTCCCCCAGGTTGATGGGTAAAATAGCCGCATTTTTCGTATTCAACATGCGTGGTCAAACGCCGCGCTTACTCA GGAGCAGCTCCTGTGTAAACACTGATTGCCTCCCCCAGGTTGATGGGTAAAATAGCCGCATTTTTCGTATTCAACATGCGTGGTCAAACGCCGCGCTTACTCAAGAAGATTTGACTATGACGTTGTCT TGAGTAAGCGCGGCGTTTGACCACGCATGTTGAATACGAAAAATGC 46 TTerm_0879 NC_003197.2 4831231 4831246 16 4831251 4831266 16 4 81 0 17 78 21 76 23 0 4831248 AAAACTTTAATCATCA TGATGATAAATGGTTT True GGTTAAGAA ATAATTCGC True False - AAACCATTTATCATCA CCAA TGATGATTAAAGTTTT TTCTTAACC 50 STM4576 intergenic 4831123 4831431 - down AATGAATAATATCAGAGAGACGAATGTGTCTCTGATATTATTTAAACATAACAACATATTCTGAAAAATGAGTGAATAGCACAAATAGTTAAAACACACTCACTAACTACTATATTCTTTAAAATTAATATTATTTCCCCGCACTTCATAAACCCAGCGAATTATAAACCATTTATCATCACCAATGATGATTAAAGTTTTTCTTAACCAAGATTTAATTTTATTAAATTTACAACATATCATTATCTTCATAGAATCCCGACCCGCGCATTACATGTCATTTGGAAATATACTTAATCGTTAGGGAT CGTGGATTGCAGAAGCTGTGCGCTAAATGAATAATATCAGAGAGACGAATGTGTCTCTGATATTATTTAAACATAACAACATATTCTGAAAAATGAGTGAATAGCACAAATAGTTAAAACACACTCACTAACTACTATATTCTTTAAAATTAATATTATTTCCCCGCACTTCATAAACCCAGCGAATTATAAACCATTTATCATCACCAATGATGATTAAAGTTTTTCTTAACCAAGATTTAATTTTATTAAATTTACAACATATCATTATCTTCATAGAATCCCGACCCGCGCATTACATGTCATTTGGAAATATACTTAATCGTTAGGGATTACTGATGAAAAAATTATTAATAGC AATGAATAATATCAGAGAGACGAATGTGTCTCTGATATTATTTAAACATAACAACATATTCTGAAAAATGAGTGAATAGCACAAATAGTTAAAACACACTCACTAACTACTATATTCTTTAAAATTAATATTATTTCCCCGCACTTCATAAACCCAGCGAATTATAAACCATTTATCATCACCAATGATGATTAAAGTTT 200 TTerm_0880 NC_003197.2 4854496 4854504 9 4854510 4854518 9 5 88 0 13 100 0 100 0 0 4854506 ATTATAATT AATTAAAAT True CACTTAAAA AGCCAACAA True False - ATTTTAATT TACTT AATTATAAT TTTTAAGTG 26 STM4597 intergenic 4854427 4854807 - down ACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGCCTGCATTTTGTACTTTTCTCTCATTCGTATCCTCCAATAGCGATGTTCATCGCTTCGCTATCCTGTACGCTCTACGCGCTCGTTAAGCACGGTACCTATGATAGCTGTCATAAAATGATTGCAAATAAAATCATCACATTTACTATGGTTAACCTTACAAACAGCGTTGTCGCTCATGCATTGATAAGGTGAATACATTGACTTAAATATTCTTGTTGGCTATTTTAATTTACTTAATTATAATTTTAAGTGAATATTAAATTTATGTTTACCTTTTAATAGTCAACCACTTTATCAGCCATAATAATGGGG AAAGCCTGATCGTCCAGTACCGCTAACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGCCTGCATTTTGTACTTTTCTCTCATTCGTATCCTCCAATAGCGATGTTCATCGCTTCGCTATCCTGTACGCTCTACGCGCTCGTTAAGCACGGTACCTATGATAGCTGTCATAAAATGATTGCAAATAAAATCATCACATTTACTATGGTTAACCTTACAAACAGCGTTGTCGCTCATGCATTGATAAGGTGAATACATTGACTTAAATATTCTTGTTGGCTATTTTAATTTACTTAATTATAATTTTAAGTGAATATTAAATTTATGTTTACCTTTTAATAGTCAACCACTTTATCAGCCATAATAATGGGGAAGATATGAAGCAGTTAAACGGCGG ACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGCCTGCATTTTGTACTTTTCTCTCATTCGTATCCTCCAATAGCGATGTTCATCGCTTCGCTATCCTGTACGCTCTACGCGCTCGTTAAGCACGGTACCTATGATAGCTGTCATAAAATGATTGCAAATAAAATCATCACATTTACTATGGTTAACCTTACAAACAGCGTTGTCGCTCATGCATTGATAAGGTGAATACATTGACTTAAATATTCTTGTTGGCTATTTTAATTTACTTAATTATAA 311 TTerm_0881 NC_003197.2 4854739 4854753 15 4854762 4854776 15 8 86 0 20 30 70 23 76 0 4854757 GGCGGGCGGCGTTTT AAATCGCCGCCTGCC True AAAATGCAG GGAACTCCT True False - GGCAGGCGGCGATTT CGCTCAGT AAAACGCCGCCCGCC CTGCATTTT 56 STM4597 intergenic 4854427 4854807 - down ACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGCCTGCATTTTGTACTTTTCTCTCATTCGTATCCTCCAATAGCGATGTTCATCGCTTCGCTATCCTGTACGCTCTACGCGCTCGTTAAGCACGGTACCTATGATAGCTGTCATAAAATGATTGCAAATAAAATCATCACATTTACTATGGTTAACCTTACAAACAGCGTTGTCGCTCATGCATTGATAAGGTGAATACATTGACTTAAATATTCTTGTTGGCTATTTTAATTTACTTAATTATAATTTTAAGTGAATATTAAATTTATGTTTACCTTTTAATAGTCAACCACTTTATCAGCCATAATAATGGGG AAAGCCTGATCGTCCAGTACCGCTAACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGCCTGCATTTTGTACTTTTCTCTCATTCGTATCCTCCAATAGCGATGTTCATCGCTTCGCTATCCTGTACGCTCTACGCGCTCGTTAAGCACGGTACCTATGATAGCTGTCATAAAATGATTGCAAATAAAATCATCACATTTACTATGGTTAACCTTACAAACAGCGTTGTCGCTCATGCATTGATAAGGTGAATACATTGACTTAAATATTCTTGTTGGCTATTTTAATTTACTTAATTATAATTTTAAGTGAATATTAAATTTATGTTTACCTTTTAATAGTCAACCACTTTATCAGCCATAATAATGGGGAAGATATGAAGCAGTTAAACGGCGG ACCGCTTATGGCTCCCGCCGGGAGGAGTTCCGGCAGGCGGCGATTTCGCTCAGTAAAACGCCGCCCGC 68 TTerm_0882 NC_003277.2 26949 26957 9 26962 26970 9 4 88 0 13 94 5 100 0 0 26959 AAAACATTA TAATATTTT True CATATTACA TCAAAAAAC True True - AAAATATTA TATT TAATGTTTT TGTAATATG 26 PSLT038 intergenic 26917 27178 - down AGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACT CGTTTTATCGTTTGATGACAGAGTAAGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACTATGAGAGTTTCTGGTAGTGCGTCAT AGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTT 229 TTerm_0883 NC_003277.2 27095 27103 9 27108 27116 9 4 100 0 18 100 0 100 0 0 27105 TAATTTATT AATAAATTA True AAAATTTGT ATGAGCATT True False - TAATTTATT AATC AATAAATTA ACAAATTTT 36 PSLT038 intergenic 26917 27178 - down AGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACT CGTTTTATCGTTTGATGACAGAGTAAGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATTACAAATTTTCATTGAAGGCTCCCCCCTTACTGACGAATTCCGGCACCGTAAAGGAATAACGCTCATGCATATTGATATGTCCGCACTGTAATGGTGAAAATTACATAAGCAAGAGCGTTTTTTGAAAAATATTATATTTAATGTTTTGTAATATGCATTTTATTGAGGTAGTGTAACTATGAGAGTTTCTGGTAGTGCGTCAT AGTATGGGTTTGGGGAGCAACGGAACAGTAAACGCCGTTAAACAGCTATTTTAAATGCTCATTAATTTATTAATCAATAAATT 83 TTerm_0884 NC_003277.2 27998 28006 9 28015 28023 9 8 100 0 18 88 11 88 11 0 28010 TCATTTTTT AAAAAATGA True AGAAAACCT TATTTCGGT True False - TCATTTTTT CGCCTGAT AAAAAATGA AGGTTTTCT 36 PSLT039 intergenic 27903 28185 - down GATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTTCCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACTTTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATGAGGTTTTCTGGATAACTAATCGTTTTATTAAAAAAAAACTGAGAATTTATATCTAATAATATGGCGATATATCCATATCGCAAAGGAGATTTCCC TAAACATGAGGGTACTCAACTCATAGATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTTCCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACTTTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATGAGGTTTTCTGGATAACTAATCGTTTTATTAAAAAAAAACTGAGAATTTATATCTAATAATATGGCGATATATCCATATCGCAAAGGAGATTTCCCATGCCCATAAATAGGCCTAATCTAA GATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTTCCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACTTTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATG 187 TTerm_0885 NC_003277.2 28116 28121 6 28131 28136 6 9 100 0 12 33 66 33 66 0 28125 GGGGTT AACCCC True AAAAATCTG TTATAGAGC True False - GGGGTT ATACTCCGG AACCCC CAGATTTTT 56 PSLT039 intergenic 27903 28185 - down GATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTTCCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACTTTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATGAGGTTTTCTGGATAACTAATCGTTTTATTAAAAAAAAACTGAGAATTTATATCTAATAATATGGCGATATATCCATATCGCAAAGGAGATTTCCC TAAACATGAGGGTACTCAACTCATAGATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCCCAGATTTTTCCGTCACCCTAGGCCCGCAAAGTAGTGCATCTAAACTTTTGCCATTACCCTTCTTTAACTTTCTGCTCGGAACGGACCGAAATATCATTTTTTCGCCTGATAAAAAATGAGGTTTTCTGGATAACTAATCGTTTTATTAAAAAAAAACTGAGAATTTATATCTAATAATATGGCGATATATCCATATCGCAAAGGAGATTTCCCATGCCCATAAATAGGCCTAATCTAA GATACTAAGAATCTATTCCAGAAGTGGTATGAGCGGCCTAGCTCTATAAGGGGTTATACTCCGGAACCC 69 TTerm_0886 NC_003277.2 37442 37450 9 37459 37467 9 8 88 0 13 83 16 87 12 0 37454 TACATTTTC GAAAATTTA True TCAAAAAAT ATGAGCTCT True False - TAAATTTTC TCTGGAAT GAAAATGTA ATTTTTTGA 34 PSLT046 intergenic 37315 37522 - down ACTGAAGCAGTCCGAGTCCGAATACAGTCAGCCTCGCATTACATTAAGAGCTCATTAAATTTTCTCTGGAATGAAAATGTATTTTTTGAGTACACCCAAAACGCACAGTCTGGTGAGACAGTTTTTCTGTCTCATTTGGGTTGTTTTTATCCCATTCCGGTGTTACGTTTTCATCATCTAGAGTTAAACGAGACAGTTTTCACCATT GTAAGGTTGAGTTTTTCGAAGTATAACTGAAGCAGTCCGAGTCCGAATACAGTCAGCCTCGCATTACATTAAGAGCTCATTAAATTTTCTCTGGAATGAAAATGTATTTTTTGAGTACACCCAAAACGCACAGTCTGGTGAGACAGTTTTTCTGTCTCATTTGGGTTGTTTTTATCCCATTCCGGTGTTACGTTTTCATCATCTAGAGTTAAACGAGACAGTTTTCACCATTATGGCACTTTACGGCTATGCCCGCG ACTGAAGCAGTCCGAGTCCGAATACAGTCAGCCTCGCATTACATTAAGAGCTCATTAAATTTTCTCTGGAATGAAAATGT 80 TTerm_0887 NC_003277.2 50602 50607 6 50614 50619 6 6 100 0 12 50 50 50 50 0 50610 GGTATG CATACC True GCCGAAAAG GGAGACGGT True False - GGTATG TTCGCC CATACC CTTTTCGGC 48 PSLT060 intergenic 50381 50922 + down CAGATGACGAGACCACGGGCGGCGGTGCCGCCCCACTGAACCAACGGAGAAAATCATGATGTATGGCACACGTAAAGAACTGAACTCAAAGCTGAAACGCATGTTTGGCAACGACGAGCGTTTTGCCCTGCTGATCTGGACGAAGCAGGACGTTATGTCACTGACTCAGGCGATGACCGAAGTGGAGGCCGATGCGATTTTGCGTGAGATTGGCCGAAAAGGTATGGGCGAACATACCGGAGACGGTATTTCAGACAGCACGGTACAGGCGCTGTACGCCGGATTACGGACTGAAATCCCGACCGTCAGTGTTCCCGCCGACCTGCTGGCAAGGGTGACGAATATCGCCGGGCGGGCGCTGGATACGGAGGACGCTCAGGCCTGGCCTCTTGTATGTCAGGAGTACCCCGGCGTTGCCGACGCTCAGGTCGATATTGCGCGGCTCAGGCAACTGGCGCTGGCGGCGTAACGTACCACCCCGTACCGGGTGACGGGCGGGGTATCAATCACAACTGTATGAACACGAAGAGGAACAACACAA GCTCAATGAGTGTTTTAAAGACTGACAGATGACGAGACCACGGGCGGCGGTGCCGCCCCACTGAACCAACGGAGAAAATCATGATGTATGGCACACGTAAAGAACTGAACTCAAAGCTGAAACGCATGTTTGGCAACGACGAGCGTTTTGCCCTGCTGATCTGGACGAAGCAGGACGTTATGTCACTGACTCAGGCGATGACCGAAGTGGAGGCCGATGCGATTTTGCGTGAGATTGGCCGAAAAGGTATGGGCGAACATACCGGAGACGGTATTTCAGACAGCACGGTACAGGCGCTGTACGCCGGATTACGGACTGAAATCCCGACCGTCAGTGTTCCCGCCGACCTGCTGGCAAGGGTGACGAATATCGCCGGGCGGGCGCTGGATACGGAGGACGCTCAGGCCTGGCCTCTTGTATGTCAGGAGTACCCCGGCGTTGCCGACGCTCAGGTCGATATTGCGCGGCTCAGGCAACTGGCGCTGGCGGCGTAACGTACCACCCCGTACCGGGTGACGGGCGGGGTATCAATCACAACTGTATGAACACGAAGAGGAACAACACAATGAGAAACACGCTCAGTACGCTGAT TTGTGTTGTTCCTCTTCGTGTTCATACAGTTGTGATTGATACCCCGCCCGTCACCCGGTACGGGGTGGTACGTTACGCCGCCAGCGCCAGTTGCCTGAGCCGCGCAATATCGACCTGAGCGTCGGCAACGCCGGGGTACTCCTGACATACAAGAGGCCAGGCCTGAGCGTCCTCCGTATCCAGCGCCCGCCCGGCGATATTCGTCACCCTTGCCAGCAGGTCGGCGGGAACACTGACGGTCGGGATTTCAGTCCGTAATCCGGCGTACAGCGCCTGTACCGTGCTGTCTGAAATACCGTCTCCGGTATGTTCGCCCATAC 320 TTerm_0888 NC_003277.2 53228 53236 9 53241 53249 9 4 88 0 13 16 83 12 87 0 53238 CCTGCAGGC GCCTGCGGG True CGAAAAAAC GGGAAGGAC True False - CCCGCAGGC GCCA GCCTGCAGG GTTTTTTCG 66 PSLT063 intergenic 53117 53353 + down CAGATATTAGTGCGCCGTGTACACCGGTGGTCACTTCCTCTTACAGGGCGGAAAAAGCAGTCAGGCATGATGGCAGGCGGGGAGGGCGCCTGTCAGCCCGCGCGAAAAAACCTGCAGGCTGGCGCCTGCGGGGGGAAGGACAGGGGCCGCGCTTCGCGCCGCTCCCTGCCCTTTTCCCCCTCTGCCTCTGATGGCGTACACTTACAGCCGGTTTCCATTTCTGTCGGAGGATGTGA TAACCTGACCGAAGGAAACTACTGACAGATATTAGTGCGCCGTGTACACCGGTGGTCACTTCCTCTTACAGGGCGGAAAAAGCAGTCAGGCATGATGGCAGGCGGGGAGGGCGCCTGTCAGCCCGCGCGAAAAAACCTGCAGGCTGGCGCCTGCGGGGGGAAGGACAGGGGCCGCGCTTCGCGCCGCTCCCTGCCCTTTTCCCCCTCTGCCTCTGATGGCGTACACTTACAGCCGGTTTCCATTTCTGTCGGAGGATGTGATGTCCGGACTGAATCTGGCGGCAAC TCACATCCTCCGACAGAAATGGAAACCGGCTGTAAGTGTACGCCATCAGAGGCAGAGGGGGAAAAGGGCAGGGAGCGGCGCGAAGCGCGGCCCCTGTCCTTCCCCCCGCAGGCGCCAGCCTGCAG 125 TTerm_0889 NC_003277.2 54169 54183 15 54192 54206 15 8 93 0 25 60 40 64 35 0 54187 CAAAACTTTTTGCCG CGGCAAAAACTTTTG True ACAGCCCAC CGTTCTGCC True True - CAAAAGTTTTTGCCG GCCTTTTA CGGCAAAAAGTTTTG GTGGGCTGT 82 PSLT065 intergenic 54186 54395 + down AAGGCCGGCAAAAACTTTTGCGTTCTGCCCCGGACAGGTGCGTCGGGCCGTGGCAGTGATGCCCCTTGCGGCGAAGGTTCTCAAACGGGTGATGGCAGTACCAGAGGGAACAGAACAGCAGGTCCCCGCAAAACGTCAAAACCGCGGCTCCCGAAACTCAACGGGTGATGGTTTTTAAAGTCAAAACAACGCATTAAGGAGATTTATCA CAGCCCACAAAACTTTTTGCCGTAAAAGGCCGGCAAAAACTTTTGCGTTCTGCCCCGGACAGGTGCGTCGGGCCGTGGCAGTGATGCCCCTTGCGGCGAAGGTTCTCAAACGGGTGATGGCAGTACCAGAGGGAACAGAACAGCAGGTCCCCGCAAAACGTCAAAACCGCGGCTCCCGAAACTCAACGGGTGATGGTTTTTAAAGTCAAAACAACGCATTAAGGAGATTTATCATGGCAGCACGTGGCGTAAACAAAGT TGATAAATCTCCTTAATGCGTTGTTTTGACTTTAAAAACCATCACCCGTTGAGTTTCGGGAGCCGCGGTTTTGACGTTTTGCGGGGACCTGCTGTTCTGTTCCCTCTGGTACTGCCATCACCCGTTTGAGAACCTTCGCCGCAAGGGGCATCACTGCCACGGCCCGACGCACCTGTCCGGGGCAGAACGCAAAAGTTTTTGCCGGCCTTTTACGGCAAAAAGTTTT 226 TTerm_0890